Toll - interleukin 1 - resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 26 - 205 | 2.9e-52 | TIR domain |
| TIR_2 | PF13676 | 29 - 139 | 2.7e-14 | TIR domain |
| NB-ARC | PF00931 | 227 - 376 | 5.6e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 446 - 518 | 1.5e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 698 - 793 | 4.2e-10 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 763 - 848 | 1.6e-11 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 768 - 937 | 1.6e-12 | Leucine-rich repeat region |
| C-JID | PF20160 | 995 - 1050 | 1.5e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 797 |
| Acc36I | ACCTGC | 3 cut(s) | 220, 797, 2724 |
| AccI | GTMKAC | 1 cut(s) | 3039 |
| AccII | CGCG | 2 cut(s) | 582, 3219 |
| AccIII | TCCGGA | 1 cut(s) | 1843 |
| AciI | CCGC | 5 cut(s) | 48, 115, 625, 1761, 2604 |
| AclWI | GGATC | 6 cut(s) | 362, 963, 1559, 3037, 3406, 3433 |
| AcsI | RAATTY | 8 cut(s) | 755, 1259, 1446, 2070, 2176, 2333, 2997, 3146 |
| AcuI | CTGAAG | 8 cut(s) | 173, 1079, 1983, 2019, 2762, 3018, 3462, 3492 |
| AdeI | CACNNNGTG | 2 cut(s) | 288, 2316 |
| AfaI | GTAC | 4 cut(s) | 381, 907, 1138, 3185 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 727, 2830 |
| AflII | CTTAAG | 2 cut(s) | 776, 2468 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2734 |
| AjiI | CACGTC | 2 cut(s) | 68, 934 |
| AjnI | CCWGG | 3 cut(s) | 2155, 2960, 2986 |
| Alw21I | GWGCWC | 3 cut(s) | 459, 2321, 2700 |
| Alw26I | GTCTC | 6 cut(s) | 1326, 1467, 2138, 2376, 2519, 2721 |
| Alw44I | GTGCAC | 1 cut(s) | 455 |
| AlwI | GGATC | 6 cut(s) | 362, 963, 1559, 3037, 3406, 3433 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2052 |
| Ama87I | CYCGRG | 1 cut(s) | 2724 |
| Aor13HI | TCCGGA | 1 cut(s) | 1843 |
| AoxI | GGCC | 5 cut(s) | 334, 567, 2963, 3237, 3300 |
| ApaLI | GTGCAC | 1 cut(s) | 455 |
| ApeKI | GCWGC | 3 cut(s) | 50, 143, 485 |
| ApoI | RAATTY | 8 cut(s) | 755, 1259, 1446, 2070, 2176, 2333, 2997, 3146 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2403 |
| AspLEI | GCGC | 2 cut(s) | 1432, 2902 |
| AspS9I | GGNCC | 4 cut(s) | 209, 567, 913, 3347 |
| AsuC2I | CCSGG | 2 cut(s) | 523, 1569 |
| AsuHPI | GGTGA | 4 cut(s) | 262, 1055, 3167, 3467 |
| AsuII | TTCGAA | 1 cut(s) | 3067 |
| AvaI | CYCGRG | 1 cut(s) | 2724 |
| AvaII | GGWCC | 3 cut(s) | 209, 913, 3347 |
| BaeGI | GKGCMC | 1 cut(s) | 459 |
| BanII | GRGCYC | 1 cut(s) | 2700 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1896, 1928 |
| BbsI | GAAGAC | 2 cut(s) | 2127, 3304 |
| Bbv12I | GWGCWC | 3 cut(s) | 459, 2321, 2700 |
| BbvI | GCAGC | 3 cut(s) | 37, 130, 497 |
| BccI | CCATC | 5 cut(s) | 141, 334, 379, 1441, 1736 |
| BceAI | ACGGC | 1 cut(s) | 1813 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 938, 972, 2377, 2411, 2514, 2548 |
| BciT130I | CCWGG | 3 cut(s) | 2157, 2962, 2988 |
| BciVI | GTATCC | 1 cut(s) | 1178 |
| BclI | TGATCA | 2 cut(s) | 252, 3460 |
| BcnI | CCSGG | 2 cut(s) | 523, 1569 |
| BcoDI | GTCTC | 6 cut(s) | 1326, 1467, 2138, 2376, 2519, 2721 |
| BfmI | CTRYAG | 4 cut(s) | 483, 681, 2491, 2731 |
| BfrI | CTTAAG | 2 cut(s) | 776, 2468 |
| BfuAI | ACCTGC | 3 cut(s) | 220, 797, 2724 |
| BfuI | GTATCC | 1 cut(s) | 1178 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3299 |
| BglII | AGATCT | 1 cut(s) | 1056 |
| BisI | GCNGC | 4 cut(s) | 51, 144, 486, 625 |
| BlsI | GCNGC | 4 cut(s) | 52, 145, 487, 626 |
| Bme1390I | CCNGG | 5 cut(s) | 523, 1569, 2157, 2962, 2988 |
| Bme18I | GGWCC | 3 cut(s) | 209, 913, 3347 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2734 |
| BmeT110I | CYCGRG | 1 cut(s) | 2724 |
| BmgBI | CACGTC | 2 cut(s) | 68, 934 |
| BmgT120I | GGNCC | 4 cut(s) | 209, 567, 913, 3347 |
| BmiI | GGNNCC | 2 cut(s) | 3199, 3348 |
| BmrFI | CCNGG | 5 cut(s) | 523, 1569, 2157, 2962, 2988 |
| BmrI | ACTGGG | 1 cut(s) | 2696 |
| BmsI | GCATC | 8 cut(s) | 397, 460, 636, 684, 1497, 1719, 2142, 2637 |
| BmuI | ACTGGG | 1 cut(s) | 2696 |
| BpiI | GAAGAC | 2 cut(s) | 2127, 3304 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2252, 2284 |
| BpmI | CTGGAG | 1 cut(s) | 1961 |
| Bpu14I | TTCGAA | 1 cut(s) | 3067 |
| BpuEI | CTTGAG | 2 cut(s) | 2120, 2315 |
| BpuMI | CCSGG | 2 cut(s) | 523, 1569 |
| Bsa29I | ATCGAT | 2 cut(s) | 177, 366 |
| BsaAI | YACGTR | 1 cut(s) | 1874 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1078, 1605 |
| BsaJI | CCNNGG | 4 cut(s) | 118, 726, 2960, 3193 |
| BsaWI | WCCGGW | 2 cut(s) | 978, 1843 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2682, 2712 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 727, 2830 |
| Bse1I | ACTGG | 4 cut(s) | 1045, 1805, 1821, 2702 |
| Bse3DI | GCAATG | 3 cut(s) | 27, 944, 2976 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1078, 1605 |
| BseAI | TCCGGA | 1 cut(s) | 1843 |
| BseBI | CCWGG | 3 cut(s) | 2157, 2962, 2988 |
| BseCI | ATCGAT | 2 cut(s) | 177, 366 |
| BseDI | CCNNGG | 4 cut(s) | 118, 726, 2960, 3193 |
| BseJI | GATNNNNATC | 2 cut(s) | 1078, 1605 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 727, 2830 |
| BseMI | GCAATG | 3 cut(s) | 27, 944, 2976 |
| BseMII | CTCAG | 6 cut(s) | 810, 913, 2007, 2059, 2608, 2981 |
| BseNI | ACTGG | 4 cut(s) | 1045, 1805, 1821, 2702 |
| BseRI | GAGGAG | 2 cut(s) | 1633, 2213 |
| BseSI | GKGCMC | 1 cut(s) | 459 |
| BseXI | GCAGC | 3 cut(s) | 37, 130, 497 |
| BsgI | GTGCAG | 1 cut(s) | 1719 |
| Bsh1236I | CGCG | 2 cut(s) | 582, 3219 |
| BshFI | GGCC | 5 cut(s) | 336, 569, 2965, 3239, 3302 |
| BshVI | ATCGAT | 2 cut(s) | 177, 366 |
| BsiHKAI | GWGCWC | 3 cut(s) | 459, 2321, 2700 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2724 |
| BsiSI | CCGG | 5 cut(s) | 337, 522, 979, 1569, 1844 |
| BslFI | GGGAC | 3 cut(s) | 538, 2462, 3360 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 727, 2830 |
| BsmAI | GTCTC | 6 cut(s) | 1326, 1467, 2138, 2376, 2519, 2721 |
| BsmBI | CGTCTC | 1 cut(s) | 2519 |
| BsmFI | GGGAC | 3 cut(s) | 538, 2462, 3360 |
| BsmI | GAATGC | 1 cut(s) | 654 |
| BsnI | GGCC | 5 cut(s) | 336, 569, 2965, 3239, 3302 |
| BsoBI | CYCGRG | 1 cut(s) | 2724 |
| Bsp119I | TTCGAA | 1 cut(s) | 3067 |
| Bsp1286I | GDGCHC | 3 cut(s) | 459, 2321, 2700 |
| Bsp13I | TCCGGA | 1 cut(s) | 1843 |
| Bsp1407I | TGTACA | 1 cut(s) | 1136 |
| Bsp68I | TCGCGA | 1 cut(s) | 582 |
| BspACI | CCGC | 5 cut(s) | 48, 115, 625, 1761, 2604 |
| BspANI | GGCC | 5 cut(s) | 336, 569, 2965, 3239, 3302 |
| BspCNI | CTCAG | 6 cut(s) | 809, 912, 2008, 2058, 2607, 2980 |
| BspDI | ATCGAT | 2 cut(s) | 177, 366 |
| BspEI | TCCGGA | 1 cut(s) | 1843 |
| BspFNI | CGCG | 2 cut(s) | 582, 3219 |
| BspLI | GGNNCC | 2 cut(s) | 3199, 3348 |
| BspMAI | CTGCAG | 2 cut(s) | 487, 2735 |
| BspMI | ACCTGC | 3 cut(s) | 220, 797, 2724 |
| BspPI | GGATC | 6 cut(s) | 362, 963, 1559, 3037, 3406, 3433 |
| BspQI | GCTCTTC | 2 cut(s) | 1098, 1106 |
| BspT104I | TTCGAA | 1 cut(s) | 3067 |
| BspTI | CTTAAG | 2 cut(s) | 776, 2468 |
| BsrDI | GCAATG | 3 cut(s) | 27, 944, 2976 |
| BsrGI | TGTACA | 1 cut(s) | 1136 |
| BsrI | ACTGG | 4 cut(s) | 1045, 1805, 1821, 2702 |
| BssECI | CCNNGG | 4 cut(s) | 118, 726, 2960, 3193 |
| BssT1I | CCWWGG | 2 cut(s) | 118, 3193 |
| Bst2UI | CCWGG | 3 cut(s) | 2157, 2962, 2988 |
| Bst4CI | ACNGT | 9 cut(s) | 443, 682, 1130, 1207, 2495, 2531, 2563, 2896, 3171 |
| Bst6I | CTCTTC | 7 cut(s) | 754, 1041, 1098, 1106, 1791, 2112, 3246 |
| BstAFI | CTTAAG | 2 cut(s) | 776, 2468 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1516, 2897 |
| BstAUI | TGTACA | 1 cut(s) | 1136 |
| BstBAI | YACGTR | 1 cut(s) | 1874 |
| BstBI | TTCGAA | 1 cut(s) | 3067 |
| BstC8I | GCNNGC | 6 cut(s) | 673, 967, 1113, 2626, 3221, 3320 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 725 |
| BstFNI | CGCG | 2 cut(s) | 582, 3219 |
| BstHHI | GCGC | 2 cut(s) | 1432, 2902 |
| BstMAI | GTCTC | 6 cut(s) | 1326, 1467, 2138, 2376, 2519, 2721 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1516, 1867, 2704, 2897, 3299 |
| BstNI | CCWGG | 3 cut(s) | 2157, 2962, 2988 |
| BstNSI | RCATGY | 4 cut(s) | 143, 1368, 2985, 3227 |
| BstSCI | CCNGG | 5 cut(s) | 521, 1567, 2155, 2960, 2986 |
| BstSFI | CTRYAG | 4 cut(s) | 483, 681, 2491, 2731 |
| BstSLI | GKGCMC | 1 cut(s) | 459 |
| BstUI | CGCG | 2 cut(s) | 582, 3219 |
| BstV1I | GCAGC | 3 cut(s) | 37, 130, 497 |
| BstV2I | GAAGAC | 2 cut(s) | 2127, 3304 |
| BstX2I | RGATCY | 3 cut(s) | 1056, 1564, 3029 |
| BstYI | RGATCY | 3 cut(s) | 1056, 1564, 3029 |
| Bsu15I | ATCGAT | 2 cut(s) | 177, 366 |
| BsuI | GTATCC | 1 cut(s) | 1178 |
| BsuRI | GGCC | 5 cut(s) | 336, 569, 2965, 3239, 3302 |
| BsuTUI | ATCGAT | 2 cut(s) | 177, 366 |
| BtgZI | GCGATG | 1 cut(s) | 3200 |
| BtrI | CACGTC | 2 cut(s) | 68, 934 |
| BtsI | GCAGTG | 2 cut(s) | 994, 2194 |
| BtsIMutI | CAGTG | 7 cut(s) | 678, 994, 1814, 2194, 2559, 2709, 3484 |
| BtuMI | TCGCGA | 1 cut(s) | 582 |
| BveI | ACCTGC | 3 cut(s) | 220, 797, 2724 |
| Cac8I | GCNNGC | 6 cut(s) | 673, 967, 1113, 2626, 3221, 3320 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2052 |
| CfoI | GCGC | 2 cut(s) | 1432, 2902 |
| Cfr13I | GGNCC | 4 cut(s) | 209, 567, 913, 3347 |
| ClaI | ATCGAT | 2 cut(s) | 177, 366 |
| CseI | GACGC | 1 cut(s) | 1097 |
| Csp6I | GTAC | 4 cut(s) | 380, 906, 1137, 3184 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 1149, 1184, 2013, 2048, 3318, 3353, 3376, 3411 |
| CviAII | CATG | 8 cut(s) | 140, 285, 697, 1365, 2982, 3164, 3224, 3464 |
| CviQI | GTAC | 4 cut(s) | 380, 906, 1137, 3184 |
| DraI | TTTAAA | 3 cut(s) | 600, 2181, 2445 |
| DraIII | CACNNNGTG | 2 cut(s) | 288, 2316 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2734 |
| Eam1104I | CTCTTC | 7 cut(s) | 754, 1041, 1098, 1106, 1791, 2112, 3246 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2734 |
| EarI | CTCTTC | 7 cut(s) | 754, 1041, 1098, 1106, 1791, 2112, 3246 |
| Ecl136II | GAGCTC | 1 cut(s) | 2698 |
| Eco130I | CCWWGG | 2 cut(s) | 118, 3193 |
| Eco147I | AGGCCT | 2 cut(s) | 3239, 3302 |
| Eco24I | GRGCYC | 1 cut(s) | 2700 |
| Eco32I | GATATC | 2 cut(s) | 1294, 1811 |
| Eco47I | GGWCC | 3 cut(s) | 209, 913, 3347 |
| Eco53kI | GAGCTC | 1 cut(s) | 2698 |
| Eco57I | CTGAAG | 8 cut(s) | 173, 1079, 1983, 2019, 2762, 3018, 3462, 3492 |
| Eco88I | CYCGRG | 1 cut(s) | 2724 |
| EcoICRI | GAGCTC | 1 cut(s) | 2698 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 725 |
| EcoO109I | RGGNCCY | 1 cut(s) | 913 |
| EcoRI | GAATTC | 2 cut(s) | 1259, 1446 |
| EcoRII | CCWGG | 3 cut(s) | 2155, 2960, 2986 |
| EcoRV | GATATC | 2 cut(s) | 1294, 1811 |
| EcoT14I | CCWWGG | 2 cut(s) | 118, 3193 |
| EcoT22I | ATGCAT | 1 cut(s) | 412 |
| EcoT38I | GRGCYC | 1 cut(s) | 2700 |
| ErhI | CCWWGG | 2 cut(s) | 118, 3193 |
| Esp3I | CGTCTC | 1 cut(s) | 2519 |
| FaeI | CATG | 8 cut(s) | 143, 288, 700, 1368, 2985, 3167, 3227, 3467 |
| FaqI | GGGAC | 3 cut(s) | 538, 2462, 3360 |
| FatI | CATG | 8 cut(s) | 139, 284, 696, 1364, 2981, 3163, 3223, 3463 |
| FauI | CCCGC | 1 cut(s) | 122 |
| FauNDI | CATATG | 1 cut(s) | 1866 |
| FbaI | TGATCA | 2 cut(s) | 252, 3460 |
| FblI | GTMKAC | 1 cut(s) | 3039 |
| Fnu4HI | GCNGC | 4 cut(s) | 51, 144, 486, 625 |
| FriOI | GRGCYC | 1 cut(s) | 2700 |
| Fsp4HI | GCNGC | 4 cut(s) | 51, 144, 486, 625 |
| GlaI | GCGC | 2 cut(s) | 1431, 2901 |
| GluI | GCNGC | 4 cut(s) | 51, 144, 486, 625 |
| GsuI | CTGGAG | 1 cut(s) | 1961 |
| HaeIII | GGCC | 5 cut(s) | 336, 569, 2965, 3239, 3302 |
| HapII | CCGG | 5 cut(s) | 337, 522, 979, 1569, 1844 |
| HgaI | GACGC | 1 cut(s) | 1097 |
| HhaI | GCGC | 2 cut(s) | 1432, 2902 |
| Hin1II | CATG | 8 cut(s) | 143, 288, 700, 1368, 2985, 3167, 3227, 3467 |
| Hin6I | GCGC | 2 cut(s) | 1430, 2900 |
| HinP1I | GCGC | 2 cut(s) | 1430, 2900 |
| HincII | GTYRAC | 2 cut(s) | 882, 1921 |
| HindII | GTYRAC | 2 cut(s) | 882, 1921 |
| HindIII | AAGCTT | 5 cut(s) | 9, 762, 1670, 2099, 2637 |
| HpaII | CCGG | 5 cut(s) | 337, 522, 979, 1569, 1844 |
| HphI | GGTGA | 4 cut(s) | 262, 1055, 3167, 3467 |
| Hpy166II | GTNNAC | 7 cut(s) | 457, 812, 882, 1574, 1921, 3040, 3283 |
| Hpy8I | GTNNAC | 7 cut(s) | 457, 812, 882, 1574, 1921, 3040, 3283 |
| Hpy99I | CGWCG | 1 cut(s) | 72 |
| HpyCH4III | ACNGT | 9 cut(s) | 443, 682, 1130, 1207, 2495, 2531, 2563, 2896, 3171 |
| HpyCH4IV | ACGT | 6 cut(s) | 67, 933, 1188, 1696, 1873, 2512 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1516, 1867, 2704, 2897, 3299 |
| HpySE526I | ACGT | 6 cut(s) | 67, 933, 1188, 1696, 1873, 2512 |
| Hsp92II | CATG | 8 cut(s) | 143, 288, 700, 1368, 2985, 3167, 3227, 3467 |
| HspAI | GCGC | 2 cut(s) | 1430, 2900 |
| Kpn2I | TCCGGA | 1 cut(s) | 1843 |
| Ksp22I | TGATCA | 2 cut(s) | 252, 3460 |
| LguI | GCTCTTC | 2 cut(s) | 1098, 1106 |
| LmnI | GCTCC | 5 cut(s) | 1891, 2703, 2847, 3203, 3275 |
| Lsp1109I | GCAGC | 3 cut(s) | 37, 130, 497 |
| LweI | GCATC | 8 cut(s) | 397, 460, 636, 684, 1497, 1719, 2142, 2637 |
| MaeII | ACGT | 6 cut(s) | 67, 933, 1188, 1696, 1873, 2512 |
| MaeIII | GTNAC | 4 cut(s) | 1622, 1882, 2219, 2254 |
| MfeI | CAATTG | 1 cut(s) | 1228 |
| MflI | RGATCY | 3 cut(s) | 1056, 1564, 3029 |
| MhlI | GDGCHC | 3 cut(s) | 459, 2321, 2700 |
| MlyI | GAGTC | 4 cut(s) | 2029, 2308, 3446, 3515 |
| MmeI | TCCRAC | 1 cut(s) | 592 |
| Mph1103I | ATGCAT | 1 cut(s) | 412 |
| MroI | TCCGGA | 1 cut(s) | 1843 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2403 |
| MslI | CAYNNNNRTG | 4 cut(s) | 138, 248, 1457, 1505 |
| MspA1I | CMGCKG | 3 cut(s) | 50, 2393, 2604 |
| MspCI | CTTAAG | 2 cut(s) | 776, 2468 |
| MspI | CCGG | 5 cut(s) | 337, 522, 979, 1569, 1844 |
| MspR9I | CCNGG | 5 cut(s) | 523, 1569, 2157, 2962, 2988 |
| MunI | CAATTG | 1 cut(s) | 1228 |
| Mva1269I | GAATGC | 1 cut(s) | 654 |
| MvaI | CCWGG | 3 cut(s) | 2157, 2962, 2988 |
| MvnI | CGCG | 2 cut(s) | 582, 3219 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1516, 1867, 2704, 2897, 3299 |
| NciI | CCSGG | 2 cut(s) | 523, 1569 |
| NdeI | CATATG | 1 cut(s) | 1866 |
| NlaIII | CATG | 8 cut(s) | 143, 288, 700, 1368, 2985, 3167, 3227, 3467 |
| NlaIV | GGNNCC | 2 cut(s) | 3199, 3348 |
| NmeAIII | GCCGAG | 1 cut(s) | 751 |
| NruI | TCGCGA | 1 cut(s) | 582 |
| NsiI | ATGCAT | 1 cut(s) | 412 |
| NspI | RCATGY | 4 cut(s) | 143, 1368, 2985, 3227 |
| NspV | TTCGAA | 1 cut(s) | 3067 |
| PaeR7I | CTCGAG | 1 cut(s) | 2724 |
| PaqCI | CACCTGC | 1 cut(s) | 797 |
| PceI | AGGCCT | 2 cut(s) | 3239, 3302 |
| PciSI | GCTCTTC | 2 cut(s) | 1098, 1106 |
| PctI | GAATGC | 1 cut(s) | 654 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2403 |
| PfoI | TCCNGGA | 2 cut(s) | 521, 2986 |
| PkrI | GCNGC | 4 cut(s) | 52, 145, 487, 626 |
| PleI | GAGTC | 4 cut(s) | 2028, 2307, 3445, 3514 |
| PpsI | GAGTC | 4 cut(s) | 2028, 2307, 3445, 3514 |
| Ppu21I | YACGTR | 1 cut(s) | 1874 |
| PpuMI | RGGWCCY | 1 cut(s) | 913 |
| Psp124BI | GAGCTC | 1 cut(s) | 2700 |
| Psp5II | RGGWCCY | 1 cut(s) | 913 |
| Psp6I | CCWGG | 3 cut(s) | 2155, 2960, 2986 |
| PspGI | CCWGG | 3 cut(s) | 2155, 2960, 2986 |
| PspN4I | GGNNCC | 2 cut(s) | 3199, 3348 |
| PspPI | GGNCC | 4 cut(s) | 209, 567, 913, 3347 |
| PspPPI | RGGWCCY | 1 cut(s) | 913 |
| PstI | CTGCAG | 2 cut(s) | 487, 2735 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2052 |
| PsuI | RGATCY | 3 cut(s) | 1056, 1564, 3029 |
| PvuII | CAGCTG | 1 cut(s) | 2393 |
| RruI | TCGCGA | 1 cut(s) | 582 |
| RsaI | GTAC | 4 cut(s) | 381, 907, 1138, 3185 |
| RsaNI | GTAC | 4 cut(s) | 380, 906, 1137, 3184 |
| RseI | CAYNNNNRTG | 4 cut(s) | 138, 248, 1457, 1505 |
| SacI | GAGCTC | 1 cut(s) | 2700 |
| SapI | GCTCTTC | 2 cut(s) | 1098, 1106 |
| SatI | GCNGC | 4 cut(s) | 51, 144, 486, 625 |
| Sau96I | GGNCC | 4 cut(s) | 209, 567, 913, 3347 |
| SchI | GAGTC | 4 cut(s) | 2029, 2308, 3446, 3515 |
| ScrFI | CCNGG | 5 cut(s) | 523, 1569, 2157, 2962, 2988 |
| SduI | GDGCHC | 3 cut(s) | 459, 2321, 2700 |
| SfaNI | GCATC | 8 cut(s) | 397, 460, 636, 684, 1497, 1719, 2142, 2637 |
| SfcI | CTRYAG | 4 cut(s) | 483, 681, 2491, 2731 |
| Sfr274I | CTCGAG | 1 cut(s) | 2724 |
| SfuI | TTCGAA | 1 cut(s) | 3067 |
| SinI | GGWCC | 3 cut(s) | 209, 913, 3347 |
| SlaI | CTCGAG | 1 cut(s) | 2724 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 138, 248, 1457, 1505 |
| SmlI | CTYRAG | 5 cut(s) | 776, 2135, 2294, 2468, 2724 |
| SmoI | CTYRAG | 5 cut(s) | 776, 2135, 2294, 2468, 2724 |
| SseBI | AGGCCT | 2 cut(s) | 3239, 3302 |
| SsiI | CCGC | 5 cut(s) | 48, 115, 625, 1761, 2604 |
| SspI | AATATT | 1 cut(s) | 2164 |
| SstI | GAGCTC | 1 cut(s) | 2700 |
| StuI | AGGCCT | 2 cut(s) | 3239, 3302 |
| StyD4I | CCNGG | 5 cut(s) | 521, 1567, 2155, 2960, 2986 |
| StyI | CCWWGG | 2 cut(s) | 118, 3193 |
| TaaI | ACNGT | 9 cut(s) | 443, 682, 1130, 1207, 2495, 2531, 2563, 2896, 3171 |
| TaiI | ACGT | 6 cut(s) | 70, 936, 1191, 1699, 1876, 2515 |
| TatI | WGTACW | 2 cut(s) | 1136, 3183 |
| TauI | GCSGC | 1 cut(s) | 627 |
| TscAI | CASTG | 7 cut(s) | 685, 994, 1821, 2194, 2566, 2709, 3484 |
| TseI | GCWGC | 3 cut(s) | 50, 143, 485 |
| TspGWI | ACGGA | 1 cut(s) | 542 |
| TspRI | CASTG | 7 cut(s) | 685, 994, 1821, 2194, 2566, 2709, 3484 |
| Vha464I | CTTAAG | 2 cut(s) | 776, 2468 |
| VneI | GTGCAC | 1 cut(s) | 455 |
| VpaK11BI | GGWCC | 3 cut(s) | 209, 913, 3347 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 725 |
| XapI | RAATTY | 8 cut(s) | 755, 1259, 1446, 2070, 2176, 2333, 2997, 3146 |
| XbaI | TCTAGA | 4 cut(s) | 220, 925, 1768, 2321 |
| XceI | RCATGY | 4 cut(s) | 143, 1368, 2985, 3227 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |
| XhoI | CTCGAG | 1 cut(s) | 2724 |
| XmiI | GTMKAC | 1 cut(s) | 3039 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2403 |
| Zsp2I | ATGCAT | 1 cut(s) | 412 |