Toll - interleukin 1 - resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 4 - 76 | 7.4e-08 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 142 - 210 | 4.8e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 331 - 420 | 6.8e-11 | Leucine-rich repeat region |
| C-JID | PF20160 | 523 - 612 | 8.3e-09 | C-JID domain |
| LRR_14 | PF23598 | 709 - 759 | 5.4e-12 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 709 - 766 | 1.7e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 751 - 817 | 7e-10 | Leucine-rich repeat region |
| C-JID | PF20160 | 921 - 1009 | 1.2e-08 | C-JID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 110, 816, 1704, 2898 |
| Acc36I | ACCTGC | 4 cut(s) | 1192, 2179, 2248, 2386 |
| AccIII | TCCGGA | 1 cut(s) | 925 |
| AciI | CCGC | 4 cut(s) | 952, 1944, 2154, 3138 |
| AclWI | GGATC | 7 cut(s) | 68, 774, 1023, 1634, 1994, 2828, 3188 |
| AcsI | RAATTY | 7 cut(s) | 58, 178, 303, 365, 1360, 2132, 2554 |
| AcuI | CTGAAG | 1 cut(s) | 119 |
| AcvI | CACGTG | 2 cut(s) | 1837, 3031 |
| AcyI | GRCGYC | 2 cut(s) | 1890, 3084 |
| AfaI | GTAC | 8 cut(s) | 10, 479, 836, 1272, 1855, 2000, 2466, 3049 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1236, 1943, 2430, 3137 |
| AflIII | ACRYGT | 2 cut(s) | 1836, 3030 |
| AjnI | CCWGG | 4 cut(s) | 1264, 1570, 2458, 2764 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1579, 1611, 2773, 2805 |
| Alw21I | GWGCWC | 3 cut(s) | 535, 1322, 2516 |
| Alw26I | GTCTC | 1 cut(s) | 552 |
| AlwI | GGATC | 7 cut(s) | 68, 774, 1023, 1634, 1994, 2828, 3188 |
| Aor13HI | TCCGGA | 1 cut(s) | 925 |
| AoxI | GGCC | 4 cut(s) | 88, 985, 1899, 3093 |
| ApoI | RAATTY | 7 cut(s) | 58, 178, 303, 365, 1360, 2132, 2554 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 192, 2076 |
| AspLEI | GCGC | 2 cut(s) | 1333, 2527 |
| AspS9I | GGNCC | 4 cut(s) | 16, 89, 1637, 2831 |
| AsuC2I | CCSGG | 1 cut(s) | 93 |
| AsuHPI | GGTGA | 5 cut(s) | 1769, 1984, 2056, 2963, 3178 |
| AsuII | TTCGAA | 1 cut(s) | 780 |
| AvaII | GGWCC | 3 cut(s) | 16, 1637, 2831 |
| BanII | GRGCYC | 4 cut(s) | 535, 645, 1322, 2516 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1263, 1295, 2457, 2489 |
| BbrPI | CACGTG | 2 cut(s) | 1837, 3031 |
| Bbv12I | GWGCWC | 3 cut(s) | 535, 1322, 2516 |
| BccI | CCATC | 9 cut(s) | 404, 919, 1006, 1407, 1584, 1934, 2601, 2778, 3128 |
| BceAI | ACGGC | 1 cut(s) | 810 |
| BciT130I | CCWGG | 4 cut(s) | 1266, 1572, 2460, 2766 |
| BciVI | GTATCC | 2 cut(s) | 750, 884 |
| BclI | TGATCA | 4 cut(s) | 1170, 1759, 2364, 2953 |
| BcnI | CCSGG | 1 cut(s) | 93 |
| BcoDI | GTCTC | 1 cut(s) | 552 |
| BfaI | CTAG | 5 cut(s) | 65, 117, 234, 497, 822 |
| BfmI | CTRYAG | 3 cut(s) | 578, 1220, 2414 |
| BfuAI | ACCTGC | 4 cut(s) | 1192, 2179, 2248, 2386 |
| BfuI | GTATCC | 2 cut(s) | 750, 884 |
| BglII | AGATCT | 5 cut(s) | 381, 1051, 1547, 2092, 2741 |
| BmcAI | AGTACT | 1 cut(s) | 836 |
| Bme1390I | CCNGG | 5 cut(s) | 93, 1266, 1572, 2460, 2766 |
| Bme18I | GGWCC | 3 cut(s) | 16, 1637, 2831 |
| BmgT120I | GGNCC | 4 cut(s) | 16, 89, 1637, 2831 |
| BmiI | GGNNCC | 5 cut(s) | 91, 313, 1241, 2152, 2435 |
| BmrFI | CCNGG | 5 cut(s) | 93, 1266, 1572, 2460, 2766 |
| BmrI | ACTGGG | 2 cut(s) | 892, 2000 |
| BmuI | ACTGGG | 2 cut(s) | 892, 2000 |
| BpmI | CTGGAG | 3 cut(s) | 90, 1536, 2730 |
| Bpu14I | TTCGAA | 1 cut(s) | 780 |
| BpuMI | CCSGG | 1 cut(s) | 93 |
| BsaAI | YACGTR | 2 cut(s) | 1837, 3031 |
| BsaBI | GATNNNNATC | 3 cut(s) | 681, 1297, 2491 |
| BsaHI | GRCGYC | 2 cut(s) | 1890, 3084 |
| BsaJI | CCNNGG | 3 cut(s) | 91, 1265, 2459 |
| BsaWI | WCCGGW | 1 cut(s) | 925 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1236, 1943, 2430, 3137 |
| Bse1I | ACTGG | 4 cut(s) | 887, 1553, 2006, 2747 |
| Bse8I | GATNNNNATC | 3 cut(s) | 681, 1297, 2491 |
| BseAI | TCCGGA | 1 cut(s) | 925 |
| BseBI | CCWGG | 4 cut(s) | 1266, 1572, 2460, 2766 |
| BseDI | CCNNGG | 3 cut(s) | 91, 1265, 2459 |
| BseJI | GATNNNNATC | 3 cut(s) | 681, 1297, 2491 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1236, 1943, 2430, 3137 |
| BseMII | CTCAG | 6 cut(s) | 1079, 1148, 2135, 2204, 2273, 2342 |
| BseNI | ACTGG | 4 cut(s) | 887, 1553, 2006, 2747 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| BshFI | GGCC | 4 cut(s) | 90, 987, 1901, 3095 |
| BsiHKAI | GWGCWC | 3 cut(s) | 535, 1322, 2516 |
| BsiSI | CCGG | 2 cut(s) | 93, 926 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1236, 1943, 2430, 3137 |
| BsmAI | GTCTC | 1 cut(s) | 552 |
| BsmI | GAATGC | 2 cut(s) | 1691, 2885 |
| BsnI | GGCC | 4 cut(s) | 90, 987, 1901, 3095 |
| Bsp119I | TTCGAA | 1 cut(s) | 780 |
| Bsp1286I | GDGCHC | 4 cut(s) | 535, 645, 1322, 2516 |
| Bsp13I | TCCGGA | 1 cut(s) | 925 |
| Bsp1407I | TGTACA | 1 cut(s) | 477 |
| BspACI | CCGC | 4 cut(s) | 952, 1944, 2154, 3138 |
| BspANI | GGCC | 4 cut(s) | 90, 987, 1901, 3095 |
| BspCNI | CTCAG | 6 cut(s) | 1080, 1149, 2136, 2205, 2274, 2343 |
| BspEI | TCCGGA | 1 cut(s) | 925 |
| BspLI | GGNNCC | 5 cut(s) | 91, 313, 1241, 2152, 2435 |
| BspMAI | CTGCAG | 3 cut(s) | 582, 1224, 2418 |
| BspMI | ACCTGC | 4 cut(s) | 1192, 2179, 2248, 2386 |
| BspPI | GGATC | 7 cut(s) | 68, 774, 1023, 1634, 1994, 2828, 3188 |
| BspQI | GCTCTTC | 2 cut(s) | 303, 633 |
| BspT104I | TTCGAA | 1 cut(s) | 780 |
| BsrGI | TGTACA | 1 cut(s) | 477 |
| BsrI | ACTGG | 4 cut(s) | 887, 1553, 2006, 2747 |
| BssECI | CCNNGG | 3 cut(s) | 91, 1265, 2459 |
| BssNI | GRCGYC | 2 cut(s) | 1890, 3084 |
| Bst2UI | CCWGG | 4 cut(s) | 1266, 1572, 2460, 2766 |
| Bst4CI | ACNGT | 2 cut(s) | 1168, 2362 |
| Bst6I | CTCTTC | 3 cut(s) | 303, 633, 861 |
| BstACI | GRCGYC | 2 cut(s) | 1890, 3084 |
| BstAUI | TGTACA | 1 cut(s) | 477 |
| BstBAI | YACGTR | 2 cut(s) | 1837, 3031 |
| BstBI | TTCGAA | 1 cut(s) | 780 |
| BstC8I | GCNNGC | 5 cut(s) | 578, 1189, 2176, 2245, 2383 |
| BstDEI | CTNAG | 9 cut(s) | 797, 1088, 1157, 1896, 2144, 2213, 2282, 2351, 3090 |
| BstHHI | GCGC | 2 cut(s) | 1333, 2527 |
| BstMAI | GTCTC | 1 cut(s) | 552 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 949, 1887, 3081 |
| BstNI | CCWGG | 4 cut(s) | 1266, 1572, 2460, 2766 |
| BstNSI | RCATGY | 1 cut(s) | 456 |
| BstSCI | CCNGG | 5 cut(s) | 91, 1264, 1570, 2458, 2764 |
| BstSFI | CTRYAG | 3 cut(s) | 578, 1220, 2414 |
| BstX2I | RGATCY | 9 cut(s) | 73, 381, 1015, 1051, 1547, 1986, 2092, 2741, 3180 |
| BstYI | RGATCY | 9 cut(s) | 73, 381, 1015, 1051, 1547, 1986, 2092, 2741, 3180 |
| BsuI | GTATCC | 2 cut(s) | 750, 884 |
| BsuRI | GGCC | 4 cut(s) | 90, 987, 1901, 3095 |
| BveI | ACCTGC | 4 cut(s) | 1192, 2179, 2248, 2386 |
| Cac8I | GCNNGC | 5 cut(s) | 578, 1189, 2176, 2245, 2383 |
| CfoI | GCGC | 2 cut(s) | 1333, 2527 |
| Cfr13I | GGNCC | 4 cut(s) | 16, 89, 1637, 2831 |
| CseI | GACGC | 2 cut(s) | 1879, 3073 |
| Csp6I | GTAC | 8 cut(s) | 9, 478, 835, 1271, 1854, 1999, 2465, 3048 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 246, 281 |
| CviAII | CATG | 9 cut(s) | 453, 770, 1289, 1786, 1963, 2098, 2483, 2980, 3157 |
| CviQI | GTAC | 8 cut(s) | 9, 478, 835, 1271, 1854, 1999, 2465, 3048 |
| DdeI | CTNAG | 9 cut(s) | 797, 1088, 1157, 1896, 2144, 2213, 2282, 2351, 3090 |
| DraI | TTTAAA | 4 cut(s) | 1480, 1869, 2674, 3063 |
| Eam1104I | CTCTTC | 3 cut(s) | 303, 633, 861 |
| EarI | CTCTTC | 3 cut(s) | 303, 633, 861 |
| EciI | GGCGGA | 2 cut(s) | 1959, 3153 |
| Ecl136II | GAGCTC | 3 cut(s) | 533, 1320, 2514 |
| Eco24I | GRGCYC | 4 cut(s) | 535, 645, 1322, 2516 |
| Eco47I | GGWCC | 3 cut(s) | 16, 1637, 2831 |
| Eco53kI | GAGCTC | 3 cut(s) | 533, 1320, 2514 |
| Eco57I | CTGAAG | 1 cut(s) | 119 |
| Eco72I | CACGTG | 2 cut(s) | 1837, 3031 |
| EcoICRI | GAGCTC | 3 cut(s) | 533, 1320, 2514 |
| EcoO109I | RGGNCCY | 1 cut(s) | 16 |
| EcoRII | CCWGG | 4 cut(s) | 1264, 1570, 2458, 2764 |
| EcoT22I | ATGCAT | 1 cut(s) | 588 |
| EcoT38I | GRGCYC | 4 cut(s) | 535, 645, 1322, 2516 |
| FaeI | CATG | 9 cut(s) | 456, 773, 1292, 1789, 1966, 2101, 2486, 2983, 3160 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 840, 872, 1368, 1400, 2562, 2594 |
| FatI | CATG | 9 cut(s) | 452, 769, 1288, 1785, 1962, 2097, 2482, 2979, 3156 |
| FauNDI | CATATG | 2 cut(s) | 1600, 2794 |
| FbaI | TGATCA | 4 cut(s) | 1170, 1759, 2364, 2953 |
| FriOI | GRGCYC | 4 cut(s) | 535, 645, 1322, 2516 |
| FspBI | CTAG | 5 cut(s) | 65, 117, 234, 497, 822 |
| GlaI | GCGC | 2 cut(s) | 1332, 2526 |
| GsuI | CTGGAG | 3 cut(s) | 90, 1536, 2730 |
| HaeIII | GGCC | 4 cut(s) | 90, 987, 1901, 3095 |
| HapII | CCGG | 2 cut(s) | 93, 926 |
| HgaI | GACGC | 2 cut(s) | 1879, 3073 |
| HhaI | GCGC | 2 cut(s) | 1333, 2527 |
| Hin1I | GRCGYC | 2 cut(s) | 1890, 3084 |
| Hin1II | CATG | 9 cut(s) | 456, 773, 1292, 1789, 1966, 2101, 2486, 2983, 3160 |
| Hin6I | GCGC | 2 cut(s) | 1331, 2525 |
| HinP1I | GCGC | 2 cut(s) | 1331, 2525 |
| HincII | GTYRAC | 2 cut(s) | 1227, 2421 |
| HindII | GTYRAC | 2 cut(s) | 1227, 2421 |
| HindIII | AAGCTT | 5 cut(s) | 189, 1200, 1879, 2394, 3073 |
| HpaI | GTTAAC | 2 cut(s) | 1227, 2421 |
| HpaII | CCGG | 2 cut(s) | 93, 926 |
| HphI | GGTGA | 5 cut(s) | 1769, 1984, 2056, 2963, 3178 |
| Hpy166II | GTNNAC | 4 cut(s) | 478, 626, 1227, 2421 |
| Hpy8I | GTNNAC | 4 cut(s) | 478, 626, 1227, 2421 |
| HpyAV | CCTTC | 4 cut(s) | 7, 332, 424, 977 |
| HpyCH4III | ACNGT | 2 cut(s) | 1168, 2362 |
| HpyCH4IV | ACGT | 7 cut(s) | 810, 843, 1273, 1836, 2058, 2467, 3030 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 949, 1887, 3081 |
| HpyF3I | CTNAG | 9 cut(s) | 797, 1088, 1157, 1896, 2144, 2213, 2282, 2351, 3090 |
| HpySE526I | ACGT | 7 cut(s) | 810, 843, 1273, 1836, 2058, 2467, 3030 |
| Hsp92I | GRCGYC | 2 cut(s) | 1890, 3084 |
| Hsp92II | CATG | 9 cut(s) | 456, 773, 1292, 1789, 1966, 2101, 2486, 2983, 3160 |
| HspAI | GCGC | 2 cut(s) | 1331, 2525 |
| Kpn2I | TCCGGA | 1 cut(s) | 925 |
| Ksp22I | TGATCA | 4 cut(s) | 1170, 1759, 2364, 2953 |
| KspAI | GTTAAC | 2 cut(s) | 1227, 2421 |
| LguI | GCTCTTC | 2 cut(s) | 303, 633 |
| LmnI | GCTCC | 4 cut(s) | 530, 1239, 2050, 2433 |
| MaeI | CTAG | 5 cut(s) | 65, 117, 234, 497, 822 |
| MaeII | ACGT | 7 cut(s) | 810, 843, 1273, 1836, 2058, 2467, 3030 |
| MaeIII | GTNAC | 6 cut(s) | 594, 827, 1891, 1972, 3085, 3166 |
| MfeI | CAATTG | 4 cut(s) | 615, 1101, 1231, 2425 |
| MflI | RGATCY | 9 cut(s) | 73, 381, 1015, 1051, 1547, 1986, 2092, 2741, 3180 |
| MhlI | GDGCHC | 4 cut(s) | 535, 645, 1322, 2516 |
| MlyI | GAGTC | 3 cut(s) | 246, 1956, 3150 |
| MmeI | TCCRAC | 4 cut(s) | 1690, 1708, 2884, 2902 |
| Mph1103I | ATGCAT | 1 cut(s) | 588 |
| MroI | TCCGGA | 1 cut(s) | 925 |
| MroXI | GAANNNNTTC | 2 cut(s) | 192, 2076 |
| MslI | CAYNNNNRTG | 5 cut(s) | 210, 1291, 1406, 2485, 2600 |
| MspI | CCGG | 2 cut(s) | 93, 926 |
| MspR9I | CCNGG | 5 cut(s) | 93, 1266, 1572, 2460, 2766 |
| MunI | CAATTG | 4 cut(s) | 615, 1101, 1231, 2425 |
| Mva1269I | GAATGC | 2 cut(s) | 1691, 2885 |
| MvaI | CCWGG | 4 cut(s) | 1266, 1572, 2460, 2766 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 949, 1887, 3081 |
| NciI | CCSGG | 1 cut(s) | 93 |
| NdeI | CATATG | 2 cut(s) | 1600, 2794 |
| NlaIII | CATG | 9 cut(s) | 456, 773, 1292, 1789, 1966, 2101, 2486, 2983, 3160 |
| NlaIV | GGNNCC | 5 cut(s) | 91, 313, 1241, 2152, 2435 |
| NmeAIII | GCCGAG | 2 cut(s) | 1186, 2380 |
| NmuCI | GTSAC | 4 cut(s) | 1891, 1972, 3085, 3166 |
| NsiI | ATGCAT | 1 cut(s) | 588 |
| NspI | RCATGY | 1 cut(s) | 456 |
| NspV | TTCGAA | 1 cut(s) | 780 |
| PciSI | GCTCTTC | 2 cut(s) | 303, 633 |
| PctI | GAATGC | 2 cut(s) | 1691, 2885 |
| PdmI | GAANNNNTTC | 2 cut(s) | 192, 2076 |
| PfeI | GAWTC | 8 cut(s) | 44, 286, 991, 1247, 1430, 2072, 2441, 2624 |
| PfoI | TCCNGGA | 2 cut(s) | 1570, 2764 |
| PleI | GAGTC | 3 cut(s) | 245, 1955, 3149 |
| PmaCI | CACGTG | 2 cut(s) | 1837, 3031 |
| PmlI | CACGTG | 2 cut(s) | 1837, 3031 |
| PpsI | GAGTC | 3 cut(s) | 245, 1955, 3149 |
| Ppu21I | YACGTR | 2 cut(s) | 1837, 3031 |
| PpuMI | RGGWCCY | 1 cut(s) | 16 |
| PsiI | TTATAA | 4 cut(s) | 110, 816, 1704, 2898 |
| Psp124BI | GAGCTC | 3 cut(s) | 535, 1322, 2516 |
| Psp5II | RGGWCCY | 1 cut(s) | 16 |
| Psp6I | CCWGG | 4 cut(s) | 1264, 1570, 2458, 2764 |
| PspCI | CACGTG | 2 cut(s) | 1837, 3031 |
| PspGI | CCWGG | 4 cut(s) | 1264, 1570, 2458, 2764 |
| PspN4I | GGNNCC | 5 cut(s) | 91, 313, 1241, 2152, 2435 |
| PspPI | GGNCC | 4 cut(s) | 16, 89, 1637, 2831 |
| PspPPI | RGGWCCY | 1 cut(s) | 16 |
| PstI | CTGCAG | 3 cut(s) | 582, 1224, 2418 |
| PsuI | RGATCY | 9 cut(s) | 73, 381, 1015, 1051, 1547, 1986, 2092, 2741, 3180 |
| RsaI | GTAC | 8 cut(s) | 10, 479, 836, 1272, 1855, 2000, 2466, 3049 |
| RsaNI | GTAC | 8 cut(s) | 9, 478, 835, 1271, 1854, 1999, 2465, 3048 |
| RseI | CAYNNNNRTG | 5 cut(s) | 210, 1291, 1406, 2485, 2600 |
| SacI | GAGCTC | 3 cut(s) | 535, 1322, 2516 |
| SapI | GCTCTTC | 2 cut(s) | 303, 633 |
| Sau96I | GGNCC | 4 cut(s) | 16, 89, 1637, 2831 |
| ScaI | AGTACT | 1 cut(s) | 836 |
| SchI | GAGTC | 3 cut(s) | 246, 1956, 3150 |
| ScrFI | CCNGG | 5 cut(s) | 93, 1266, 1572, 2460, 2766 |
| SduI | GDGCHC | 4 cut(s) | 535, 645, 1322, 2516 |
| SfcI | CTRYAG | 3 cut(s) | 578, 1220, 2414 |
| SfuI | TTCGAA | 1 cut(s) | 780 |
| SinI | GGWCC | 3 cut(s) | 16, 1637, 2831 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 210, 1291, 1406, 2485, 2600 |
| SsiI | CCGC | 4 cut(s) | 952, 1944, 2154, 3138 |
| SspMI | CTAG | 5 cut(s) | 65, 117, 234, 497, 822 |
| SstI | GAGCTC | 3 cut(s) | 535, 1322, 2516 |
| StyD4I | CCNGG | 5 cut(s) | 91, 1264, 1570, 2458, 2764 |
| TaaI | ACNGT | 2 cut(s) | 1168, 2362 |
| TaiI | ACGT | 7 cut(s) | 813, 846, 1276, 1839, 2061, 2470, 3033 |
| TaqI | TCGA | 2 cut(s) | 240, 780 |
| TatI | WGTACW | 2 cut(s) | 477, 834 |
| TfiI | GAWTC | 8 cut(s) | 44, 286, 991, 1247, 1430, 2072, 2441, 2624 |
| TseFI | GTSAC | 4 cut(s) | 1891, 1972, 3085, 3166 |
| Tsp45I | GTSAC | 4 cut(s) | 1891, 1972, 3085, 3166 |
| VpaK11BI | GGWCC | 3 cut(s) | 16, 1637, 2831 |
| XapI | RAATTY | 7 cut(s) | 58, 178, 303, 365, 1360, 2132, 2554 |
| XbaI | TCTAGA | 1 cut(s) | 233 |
| XceI | RCATGY | 1 cut(s) | 456 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1272, 2466 |
| XmnI | GAANNNNTTC | 2 cut(s) | 192, 2076 |
| XspI | CTAG | 5 cut(s) | 65, 117, 234, 497, 822 |
| ZrmI | AGTACT | 1 cut(s) | 836 |
| Zsp2I | ATGCAT | 1 cut(s) | 588 |