Rh5DG102800

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
9380182 .. 9382841
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG102800.1

Sequence Viewer

Length: 1917 bp
ATGGAGGACATCTGTCATGTGTTGAAAAAGAATAAGGGAACAGAAAAAGTTCAAAGCATATCCCTAAACCTCTCTCAGATTACAGAGCTTCACTTAACTCCTCAGGCCTTCAAAAAGATGTACAATCTAAAATTTCTGAAGTTCTATGGTGTAGATCGCAGGGGATACTACAACTATCCTCGGAAGGACTTCAATTTGCACTTTAATCTTCAAGATCTTGAATATCTACCCAATTCCCTTTTACATCTCAGCTGGCCTGCATTCACTTCGAAATATTTGCCATCAACATTTTCTGCAGAGAATCTGACTGAGCTTTCTATGCCTGGTAGCCAACTCCAGAGACTCTGGAATGAAGGCCAGACGCCTAGGAACTTAAAACACGTCGATCTCAGTCACTCCAAGCAGCTGGTTGAAGTTCCAGATCTCTCTATGAGCGTAAACATTGAGAGCATAGACCTTGAAGGCTGTGAAGGGCTGGTTGAAATTCCTTCCTACTTTGAAAATCTTGACAGGCTTACTTGGTTGAATGTGAGTTGTTGCACGAATCTTAGTGTTCTCTCAGATATGCCCTGCAATATGGTTTCGTTGAACTTAGGTTGGACTGCAATAGAAGACCTGCCTTCATCAATTTGGTCTCAAGAAAAACTTGTTGAATTGAATCTTAATGGGTGCGAGGGGATTAAGAAACTTCCAAACAGCATTTGGATGCTGTATTCCCTCACATCTCTTGTGTTGTCTAAGACAAGTATAGAAGGATTGCCCCCGCCAATCGAGTGTCTCTCTGGGTTAAAACATCTTGAACTGCAAAATTGCAAAAGGTTTGTCAGTCTCCCAACCAGCATTTGTAAGTTGAGATCTCTTGAGACCTTTTATCTAGATGGATGCTCTAGCTTCGAAAACTTCCCTGAGATCTTGGAGCCTATGGAACTTCTGGAGAGTCTTAGTTTAGGAGGAACCAAATTGAAAGAGCTGCCCTCTTTGATTGAAAACGTATGTTGCCCAAACAGCATCTTGCCTCCTTTGTCGGTCATTTTATGGCCTTCGATGCGTATGCTAGACCTCAGTGACTGCACAATGTTTGAAGAAATCCCTGATTGCATCTTTAGCCTAAACAGCTTATTTCAATTAGATGCGAGTGGAACCATGATTAGAAGCATACCTTCAACCATCAATCAAGCATCTCGGCTGAGGGGATTAGTTCTAATGGATTGCAAGCGCCTTGAATCTTTACCCAAGCTCCCATATCTTGTAGGATTTATAGATGCAAGTGGCTGCAAGAGATTGAAGACAGTATCTGGGTTCACGACTGCACTCACAGAAGGTTCGGATCAAAGATATCCTTTCGTGTTGCATATATTTAATAATTGCGTAAGCTTGGATGAGAATGCGAGGAGGAACATATTGGATGATGCACATCTTAGAAATATAGCAATAGCTTATTATCCGAGATTTAGCTACGAAGTTAGATGTCAGGGAATTGAAATTCCAAAATGGGTGGGCAATCAAATGGAGGGATCTTCGATAGATATCACGCTTCCTCTACATTGGTCTGAAGATCCAAACTTTTTGGGTTTAGCTTTCTGTCTTCTTGTTGACTTCCGTAAAGCACCAAATGCGACATGTGAGGCTGAATCCATTTTCAAAACCGAAAATGGTGAGAGCCATACCTATCAGTTTAGCAATAATCAGAGCTATAGTACCCGTTATGATGACGACAGCCCAGATCACCTGGTGGTGGTGTGGTACGATTCCCTTCAGAAGGTGAGGTCCACTCCTTATACCGGTGCCACTCGAGCCTCTTTTCATTTCCACTCCTTTCAGAAGGTGTGGACTAAGATGAAGCTTCATAGAGAGAAGCTCGAGGATAGGGTGAAAAGGTGTGGGGTGGGGTTTGTGTATGCTCAAGGCCAAGACTGA

Protein Analysis

638

Amino Acids

72.65

Weight (kDa)

5.69

Isoelectric Point (pI)

49.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 202 - 319 1.2e-10 Leucine-rich repeat region
C-JID PF20160 491 - 635 3.5e-12 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 624
AccB1I GGYRCC 1 cut(s) 1784
AciI CCGC 1 cut(s) 764
AclWI GGATC 3 cut(s) 1335, 1522, 1550
AcsI RAATTY 3 cut(s) 131, 483, 1482
AcuI CTGAAG 3 cut(s) 158, 1572, 1739
AcyI GRCGYC 1 cut(s) 362
AdeI CACNNNGTG 1 cut(s) 1732
AfaI GTAC 3 cut(s) 122, 1699, 1745
AfiI CCNNNNNNNGG 3 cut(s) 1735, 1759, 1781
AflIII ACRYGT 2 cut(s) 379, 1619
AgeI ACCGGT 1 cut(s) 1781
AjiI CACGTC 1 cut(s) 382
AjnI CCWGG 2 cut(s) 322, 1728
Alw26I GTCTC 5 cut(s) 334, 639, 782, 833, 857
AlwI GGATC 3 cut(s) 1335, 1522, 1550
AlwNI CAGNNNCTG 2 cut(s) 1068, 1295
Ama87I CYCGRG 2 cut(s) 1791, 1859
AoxI GGCC 5 cut(s) 105, 254, 355, 1037, 1906
ApeKI GCWGC 3 cut(s) 403, 970, 1272
ApoI RAATTY 3 cut(s) 131, 483, 1482
ArsI GACNNNNNNTTYG 2 cut(s) 807, 839
AsiGI ACCGGT 1 cut(s) 1781
Asp700I GAANNNNTTC 2 cut(s) 48, 188
AspA2I CCTAGG 1 cut(s) 365
AspLEI GCGC 1 cut(s) 1218
AspS9I GGNCC 1 cut(s) 1767
AsuHPI GGTGA 4 cut(s) 1667, 1718, 1774, 1882
AsuII TTCGAA 2 cut(s) 269, 894
AvaI CYCGRG 2 cut(s) 1791, 1859
AvaII GGWCC 1 cut(s) 1767
AvrII CCTAGG 1 cut(s) 365
AxyI CCTNAGG 1 cut(s) 102
BanI GGYRCC 1 cut(s) 1784
BbsI GAAGAC 3 cut(s) 618, 1292, 1577
BbvCI CCTCAGC 1 cut(s) 1187
BbvI GCAGC 3 cut(s) 415, 957, 1259
BccI CCATC 3 cut(s) 289, 872, 1175
BcgI CGANNNNNNTGC 6 cut(s) 249, 259, 283, 293, 1033, 1067
BciT130I CCWGG 2 cut(s) 324, 1730
BciVI GTATCC 1 cut(s) 158
BcoDI GTCTC 5 cut(s) 334, 639, 782, 833, 857
BfaI CTAG 4 cut(s) 366, 875, 888, 1055
BfmI CTRYAG 2 cut(s) 294, 1693
BfoI RGCGCY 1 cut(s) 1219
BfuAI ACCTGC 1 cut(s) 624
BfuI GTATCC 1 cut(s) 158
BglII AGATCT 4 cut(s) 214, 421, 854, 909
BisI GCNGC 3 cut(s) 404, 971, 1273
BlnI CCTAGG 1 cut(s) 365
BlsI GCNGC 3 cut(s) 405, 972, 1274
Bme1390I CCNGG 2 cut(s) 324, 1730
Bme18I GGWCC 1 cut(s) 1767
BmeT110I CYCGRG 2 cut(s) 1791, 1859
BmgBI CACGTC 1 cut(s) 382
BmgT120I GGNCC 1 cut(s) 1767
BmiI GGNNCC 4 cut(s) 918, 955, 1141, 1786
BmrFI CCNGG 2 cut(s) 324, 1730
BmsI GCATC 9 cut(s) 696, 872, 1017, 1035, 1107, 1120, 1187, 1252, 1399
BoxI GACNNNNGTC 1 cut(s) 12
BpiI GAAGAC 3 cut(s) 618, 1292, 1577
BplI GAGNNNNNCTC 8 cut(s) 764, 796, 959, 991, 1756, 1788, 1842, 1874
BpmI CTGGAG 2 cut(s) 320, 953
Bpu10I CCTNAGC 1 cut(s) 1187
Bpu14I TTCGAA 2 cut(s) 269, 894
BpuEI CTTGAG 3 cut(s) 621, 881, 1887
BsaBI GATNNNNATC 2 cut(s) 1413, 1526
BsaHI GRCGYC 1 cut(s) 362
BsaI GGTCTC 2 cut(s) 639, 857
BsaJI CCNNGG 2 cut(s) 179, 365
BsaWI WCCGGW 1 cut(s) 1781
BsaXI ACNNNNNCTCC 2 cut(s) 1221, 1251
Bsc4I CCNNNNNNNGG 3 cut(s) 1735, 1759, 1781
Bse118I RCCGGY 1 cut(s) 1781
Bse21I CCTNAGG 1 cut(s) 102
Bse8I GATNNNNATC 2 cut(s) 1413, 1526
BseBI CCWGG 2 cut(s) 324, 1730
BseDI CCNNGG 2 cut(s) 179, 365
BseGI GGATG 4 cut(s) 711, 887, 1384, 1411
BseJI GATNNNNATC 2 cut(s) 1413, 1526
BseLI CCNNNNNNNGG 3 cut(s) 1735, 1759, 1781
BseMII CTCAG 9 cut(s) 89, 116, 262, 300, 403, 573, 897, 1075, 1178
BseRI GAGGAG 2 cut(s) 90, 1405
BseXI GCAGC 3 cut(s) 415, 957, 1259
BsgI GTGCAG 2 cut(s) 1054, 1293
BshFI GGCC 5 cut(s) 107, 256, 357, 1039, 1908
BshNI GGYRCC 1 cut(s) 1784
BshTI ACCGGT 1 cut(s) 1781
BsiHKCI CYCGRG 2 cut(s) 1791, 1859
BsiSI CCGG 1 cut(s) 1782
BslI CCNNNNNNNGG 3 cut(s) 1735, 1759, 1781
BsmAI GTCTC 5 cut(s) 334, 639, 782, 833, 857
BsmI GAATGC 2 cut(s) 260, 1390
BsnI GGCC 5 cut(s) 107, 256, 357, 1039, 1908
Bso31I GGTCTC 2 cut(s) 639, 857
BsoBI CYCGRG 2 cut(s) 1791, 1859
Bsp119I TTCGAA 2 cut(s) 269, 894
Bsp1407I TGTACA 1 cut(s) 120
BspACI CCGC 1 cut(s) 764
BspANI GGCC 5 cut(s) 107, 256, 357, 1039, 1908
BspCNI CTCAG 9 cut(s) 88, 115, 261, 301, 402, 572, 898, 1074, 1179
BspLI GGNNCC 4 cut(s) 918, 955, 1141, 1786
BspMAI CTGCAG 1 cut(s) 298
BspMI ACCTGC 1 cut(s) 624
BspPI GGATC 3 cut(s) 1335, 1522, 1550
BspT104I TTCGAA 2 cut(s) 269, 894
BspT107I GGYRCC 1 cut(s) 1784
BspTNI GGTCTC 2 cut(s) 639, 857
BsrFI RCCGGY 1 cut(s) 1781
BsrGI TGTACA 1 cut(s) 120
BssAI RCCGGY 1 cut(s) 1781
BssECI CCNNGG 2 cut(s) 179, 365
BssNI GRCGYC 1 cut(s) 362
BssT1I CCWWGG 1 cut(s) 365
Bst2UI CCWGG 2 cut(s) 324, 1730
Bst4CI ACNGT 1 cut(s) 1291
BstACI GRCGYC 1 cut(s) 362
BstAPI GCANNNNNTGC 1 cut(s) 1613
BstAUI TGTACA 1 cut(s) 120
BstBI TTCGAA 2 cut(s) 269, 894
BstC8I GCNNGC 3 cut(s) 254, 258, 1214
BstENI CCTNNNNNAGG 1 cut(s) 1757
BstF5I GGATG 4 cut(s) 711, 887, 1384, 1411
BstH2I RGCGCY 1 cut(s) 1219
BstHHI GCGC 1 cut(s) 1218
BstMAI GTCTC 5 cut(s) 334, 639, 782, 833, 857
BstMWI GCNNNNNNNGC 7 cut(s) 319, 1005, 1045, 1104, 1113, 1613, 1793
BstNI CCWGG 2 cut(s) 324, 1730
BstNSI RCATGY 1 cut(s) 1623
BstPAI GACNNNNGTC 1 cut(s) 12
BstSCI CCNGG 2 cut(s) 322, 1728
BstSFI CTRYAG 2 cut(s) 294, 1693
BstV1I GCAGC 3 cut(s) 415, 957, 1259
BstV2I GAAGAC 3 cut(s) 618, 1292, 1577
BstX2I RGATCY 6 cut(s) 214, 421, 854, 909, 1514, 1555
BstXI CCANNNNNNTGG 1 cut(s) 406
BstYI RGATCY 6 cut(s) 214, 421, 854, 909, 1514, 1555
Bsu36I CCTNAGG 1 cut(s) 102
BsuI GTATCC 1 cut(s) 158
BsuRI GGCC 5 cut(s) 107, 256, 357, 1039, 1908
BtrI CACGTC 1 cut(s) 382
BtsCI GGATG 4 cut(s) 711, 887, 1384, 1411
BtsIMutI CAGTG 1 cut(s) 1069
BveI ACCTGC 1 cut(s) 624
Cac8I GCNNGC 3 cut(s) 254, 258, 1214
CaiI CAGNNNCTG 2 cut(s) 1068, 1295
CfoI GCGC 1 cut(s) 1218
Cfr10I RCCGGY 1 cut(s) 1781
Cfr13I GGNCC 1 cut(s) 1767
CseI GACGC 1 cut(s) 370
CsiI ACCWGGT 1 cut(s) 1728
Csp6I GTAC 3 cut(s) 121, 1698, 1744
CspAI ACCGGT 1 cut(s) 1781
CspCI CAANNNNNGTGG 2 cut(s) 1476, 1511
CviAII CATG 3 cut(s) 17, 1144, 1620
CviQI GTAC 3 cut(s) 121, 1698, 1744
DraIII CACNNNGTG 1 cut(s) 1732
Eco130I CCWWGG 1 cut(s) 365
Eco147I AGGCCT 1 cut(s) 107
Eco31I GGTCTC 2 cut(s) 639, 857
Eco32I GATATC 2 cut(s) 1337, 1528
Eco47I GGWCC 1 cut(s) 1767
Eco57I CTGAAG 3 cut(s) 158, 1572, 1739
Eco81I CCTNAGG 1 cut(s) 102
Eco88I CYCGRG 2 cut(s) 1791, 1859
EcoNI CCTNNNNNAGG 1 cut(s) 1757
EcoRII CCWGG 2 cut(s) 322, 1728
EcoRV GATATC 2 cut(s) 1337, 1528
EcoT14I CCWWGG 1 cut(s) 365
ErhI CCWWGG 1 cut(s) 365
FaeI CATG 3 cut(s) 20, 1147, 1623
FalI AAGNNNNNCTT 6 cut(s) 630, 662, 1144, 1176, 1324, 1356
FatI CATG 3 cut(s) 16, 1143, 1619
FauI CCCGC 1 cut(s) 771
Fnu4HI GCNGC 3 cut(s) 404, 971, 1273
FokI GGATG 4 cut(s) 718, 894, 1391, 1418
Fsp4HI GCNGC 3 cut(s) 404, 971, 1273
FspBI CTAG 4 cut(s) 366, 875, 888, 1055
GlaI GCGC 1 cut(s) 1217
GluI GCNGC 3 cut(s) 404, 971, 1273
GsuI CTGGAG 2 cut(s) 320, 953
HaeII RGCGCY 1 cut(s) 1219
HaeIII GGCC 5 cut(s) 107, 256, 357, 1039, 1908
HapII CCGG 1 cut(s) 1782
HgaI GACGC 1 cut(s) 370
HhaI GCGC 1 cut(s) 1218
Hin1I GRCGYC 1 cut(s) 362
Hin1II CATG 3 cut(s) 20, 1147, 1623
Hin6I GCGC 1 cut(s) 1216
HinP1I GCGC 1 cut(s) 1216
HincII GTYRAC 1 cut(s) 1594
HindII GTYRAC 1 cut(s) 1594
HindIII AAGCTT 2 cut(s) 1372, 1841
HinfI GANTC 8 cut(s) 301, 342, 544, 658, 937, 1223, 1631, 1748
HpaII CCGG 1 cut(s) 1782
HphI GGTGA 4 cut(s) 1667, 1718, 1774, 1882
Hpy166II GTNNAC 5 cut(s) 439, 1302, 1594, 1770, 1830
Hpy8I GTNNAC 5 cut(s) 439, 1302, 1594, 1770, 1830
Hpy99I CGWCG 1 cut(s) 386
HpyCH4III ACNGT 1 cut(s) 1291
HpyCH4IV ACGT 2 cut(s) 381, 990
HpyF10VI GCNNNNNNNGC 7 cut(s) 319, 1005, 1045, 1104, 1113, 1613, 1793
HpySE526I ACGT 2 cut(s) 381, 990
Hsp92I GRCGYC 1 cut(s) 362
Hsp92II CATG 3 cut(s) 20, 1147, 1623
HspAI GCGC 1 cut(s) 1216
LmnI GCTCC 2 cut(s) 916, 1242
Lsp1109I GCAGC 3 cut(s) 415, 957, 1259
LweI GCATC 9 cut(s) 696, 872, 1017, 1035, 1107, 1120, 1187, 1252, 1399
MabI ACCWGGT 1 cut(s) 1728
MaeI CTAG 4 cut(s) 366, 875, 888, 1055
MaeII ACGT 2 cut(s) 381, 990
MaeIII GTNAC 2 cut(s) 392, 1064
MboII GAAGA 7 cut(s) 200, 623, 1094, 1297, 1509, 1565, 1577
MflI RGATCY 6 cut(s) 214, 421, 854, 909, 1514, 1555
MlyI GAGTC 2 cut(s) 336, 946
MmeI TCCRAC 1 cut(s) 578
MroXI GAANNNNTTC 2 cut(s) 48, 188
MseI TTAA 7 cut(s) 95, 204, 374, 663, 681, 788, 1359
MslI CAYNNNNRTG 1 cut(s) 704
MspA1I CMGCKG 2 cut(s) 252, 406
MspI CCGG 1 cut(s) 1782
MspR9I CCNGG 2 cut(s) 324, 1730
Mva1269I GAATGC 2 cut(s) 260, 1390
MvaI CCWGG 2 cut(s) 324, 1730
MwoI GCNNNNNNNGC 7 cut(s) 319, 1005, 1045, 1104, 1113, 1613, 1793
NlaIII CATG 3 cut(s) 20, 1147, 1623
NlaIV GGNNCC 4 cut(s) 918, 955, 1141, 1786
NmeAIII GCCGAG 1 cut(s) 1162
NmuCI GTSAC 2 cut(s) 392, 1064
NspI RCATGY 1 cut(s) 1623
NspV TTCGAA 2 cut(s) 269, 894
PaeR7I CTCGAG 2 cut(s) 1791, 1859
PceI AGGCCT 1 cut(s) 107
PciI ACATGT 1 cut(s) 1619
PctI GAATGC 2 cut(s) 260, 1390
PdmI GAANNNNTTC 2 cut(s) 48, 188
PfeI GAWTC 6 cut(s) 301, 544, 658, 1223, 1631, 1748
PinAI ACCGGT 1 cut(s) 1781
PkrI GCNGC 3 cut(s) 405, 972, 1274
PleI GAGTC 2 cut(s) 336, 945
PpsI GAGTC 2 cut(s) 336, 945
PscI ACATGT 1 cut(s) 1619
PshAI GACNNNNGTC 1 cut(s) 12
Psp6I CCWGG 2 cut(s) 322, 1728
PspGI CCWGG 2 cut(s) 322, 1728
PspN4I GGNNCC 4 cut(s) 918, 955, 1141, 1786
PspPI GGNCC 1 cut(s) 1767
PspXI VCTCGAGB 2 cut(s) 1791, 1859
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 2 cut(s) 1068, 1295
PsuI RGATCY 6 cut(s) 214, 421, 854, 909, 1514, 1555
PvuII CAGCTG 2 cut(s) 252, 406
RsaI GTAC 3 cut(s) 122, 1699, 1745
RsaNI GTAC 3 cut(s) 121, 1698, 1744
RseI CAYNNNNRTG 1 cut(s) 704
SaqAI TTAA 7 cut(s) 95, 204, 374, 663, 681, 788, 1359
SatI GCNGC 3 cut(s) 404, 971, 1273
Sau96I GGNCC 1 cut(s) 1767
SchI GAGTC 2 cut(s) 336, 946
ScrFI CCNGG 2 cut(s) 324, 1730
SexAI ACCWGGT 1 cut(s) 1728
SfaNI GCATC 9 cut(s) 696, 872, 1017, 1035, 1107, 1120, 1187, 1252, 1399
SfcI CTRYAG 2 cut(s) 294, 1693
Sfr274I CTCGAG 2 cut(s) 1791, 1859
SfuI TTCGAA 2 cut(s) 269, 894
SinI GGWCC 1 cut(s) 1767
SlaI CTCGAG 2 cut(s) 1791, 1859
SmiMI CAYNNNNRTG 1 cut(s) 704
SmlI CTYRAG 5 cut(s) 636, 860, 1791, 1859, 1902
SmoI CTYRAG 5 cut(s) 636, 860, 1791, 1859, 1902
SseBI AGGCCT 1 cut(s) 107
SsiI CCGC 1 cut(s) 764
SspI AATATT 1 cut(s) 275
SspMI CTAG 4 cut(s) 366, 875, 888, 1055
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 322, 1728
StyI CCWWGG 1 cut(s) 365
TaaI ACNGT 1 cut(s) 1291
TaiI ACGT 2 cut(s) 384, 993
TaqI TCGA 8 cut(s) 269, 384, 771, 894, 1043, 1520, 1792, 1860
TaqII GACCGA 1 cut(s) 1015
TatI WGTACW 1 cut(s) 120
TfiI GAWTC 6 cut(s) 301, 544, 658, 1223, 1631, 1748
Tru1I TTAA 7 cut(s) 95, 204, 374, 663, 681, 788, 1359
Tru9I TTAA 7 cut(s) 95, 204, 374, 663, 681, 788, 1359
TscAI CASTG 1 cut(s) 1069
TseFI GTSAC 2 cut(s) 392, 1064
TseI GCWGC 3 cut(s) 403, 970, 1272
Tsp45I GTSAC 2 cut(s) 392, 1064
TspDTI ATGAA 5 cut(s) 366, 612, 1793, 1835, 1853
TspGWI ACGGA 1 cut(s) 1589
TspRI CASTG 1 cut(s) 1069
VpaK11BI GGWCC 1 cut(s) 1767
XagI CCTNNNNNAGG 1 cut(s) 1757
XapI RAATTY 3 cut(s) 131, 483, 1482
XbaI TCTAGA 1 cut(s) 874
XceI RCATGY 1 cut(s) 1623
XcmI CCANNNNNNNNNTGG 1 cut(s) 699
XhoI CTCGAG 2 cut(s) 1791, 1859
XmaJI CCTAGG 1 cut(s) 365
XmnI GAANNNNTTC 2 cut(s) 48, 188
XspI CTAG 4 cut(s) 366, 875, 888, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.