Rroxscaffold_2G00100990

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
22982506 .. 22985419
2914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00100990.1

Sequence Viewer

Length: 2421 bp
ATGGCCTCCTCTTCTGCTTCTTCTTCCTCTGACATCCCCCCAAAAGAGAAGTATGATGTCTTTCTCAGCTTCAGAGGCACCGATACCCGCAAGACTTTTACCAGCCATCTCTACAAGGCTTTGGATGAGAAGAAGATTGACACCTACATAGATTACAATCTTGAGCGGGGAGATGAAATCGCACCTGCCCTTTTAAAAGCAATCGAGGGATCAATGATTTCCGTAATCGTTTTCTCAGAAAACTATGCTTCTTCTCGATGGTGCTTGGACGAACTTGTGCATATACTGGAATGCAGGGAAAAGTATGGTCAACATGTGATACCCATATTTTACAATACAGTTGTATCAGATATACGACACCAGAGCGGGAGTTATGAACTTGAAGAACATTTCAAGGATAGAACAGAGTCTGAGCGTGTTAAATGGAAGGTTGCTTTGACAAAAGCAGCTAATCTTTCTGGGTTTGAATCAACTTCAACCAGGGATGATTCCGATTTGATTCAGCAAGTTGTGCAGTTTATTTTGACGAATTTGAGTTATGAGTCCTCGAGTTATGAATTAAATGGCTTCGTTGGAGTTGGAAGTCGAGTTCAGCAAATTGAATCATTACTATGTATTGTTCCTCGAGATGATCGTGTTCGCTCCACCACCCTTGCTGATGCTGTTTTTCACCGTCTCTCTTCACAATTCGATGCTTGCTGCTTTCTTGCAGATGTTAGAGAAGGTTCTGGGACCCAGAAAGGACTAAAAGACTTGCGAAACAAGCTTCTTCGTGAATTATTAGGGGACAAAACTCTTGATATCCAGAACAAAACTACAGACCGTTCTACGGCAGTGAAACTTAGCCGTAGAAAAGTCTTCATTGTTCTTGATGATGTTGACAGGTCAAGCCAATTAGAGATGTTAGCTGGACGTGATGTTACGTTTGGCCCAGGAAGTAGAATCATAATAACAACTAGAGATATGCAACGAGTTAGAGAGATAGAAGTACTGAGGAAAGGAGGTAACCATGATGTTAAGATATATGAGGTTGAGAAATTAAATGATGATGAAGCTCGTCAGCTCTTCAATTTGAATGCCTGCACTGGTATCTATTCTGAAGTAGATTCTACGAATTTGTTAACAATCATGGTAGCTTATGCTGCAGGCATCCCCTTGGCCCTTAAAATTTGGAGTTCCTTATCCCATAAACTTTCATGGGACAAGATGACAAAGTTTCTCAACGAAGACATGGGGAGCATTTATAGAGTGAGTTATGATGTCTTGAGAAAAAATGAGAAGGAAATATTTCTTGACATTGCTTGTTTCCACAAAGGGAAGAAAATAAATGATGTAAGAGGACATTTAAATTGCCGTGGTTTATCTGTGGATAGCGGAATTGATGATCTTATTGGTAGGTCTCTCATAGAACTAAGAGATAATTATCTATGGATGCACGATGTGATACAAGAAATGGGCCGGGAAATTGTCAACGAAAAATGTCCTGAAGAGCCCGGAAACCGCACTAGGTTGTACACTTCTAAGGACATCTGTCATGTATTGCAAAATGATACGGGAACTGCAACAATTGAAACCATGTCCAGGCACCGCTATGACATTATGTTTGCTAGGATAAACTTGACCCCTCAAGTCTTTGGAAGGATGTATAATCTAACATTCCTAAACCTTGATGGGTTTGGCTTCGAATTGGAACTTCCTGAAGGTGGTCTCGAGTCTCTTCCTAATGTCCTTAGATATCTGTCCTGGCCGTATTATCCTTTGGGAACTTTGCCATCAAAGTTTTCTCCAAGCTGTCTTGTTGAGCTTCATATGCCCCGTAGCCAACTCCATACACTTTGGAATAAAGACCAGAACCCTGGGCACCTAAAAAAGATCGATCTTAGCTACTCAACGAAGCTGGTTGATGTTCCATACCTCACAGCGTGTCTTGAGAGTATAAATCTTCAAGGATGTGAAAGTTTGGTTCAAGTTCCAAATCTCTCAGAGAGTCTAAATATTGTGAGTATAAACCTTCAAGAGTGCAAGAAGTTGGTTGAAGTTCCTTCGTATTTTGAAAATCTTTACAAGCTTACTGTTCTGAATCTGTGGGGGTGCCGGCTTCTAAAATGTATTCCAGAGATGCCAAGCAACATGGAATTCTTACTTATAGGTGGTCAGATATCAATGCTAGATTACAAGGGAACGATGGAATTGTCTGGATTGCCTTCATCAATCTGGTCTCTTAAGAAACTTGTCAAATTGGATCTTAAAGGGTGTTACCACATTGAGAATCTTCCAAGCAGCAATTGGATGTTGAATTCCCTCACATCTCTTGATTTGTCTTATACGAGTTTAAATTATCTGCCCTCATCAATTGAGTGTCTTTCTAGGATTGTTTCAATTGAAATGCGAAATTGCTATAGGCTTGTGAGTCTTTTGTAA

Protein Analysis

806

Amino Acids

91.77

Weight (kDa)

5.95

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 17 - 191 4.4e-54 TIR domain
TIR_2 PF13676 20 - 113 1.3e-13 TIR domain
NB-ARC PF00931 216 - 360 9.8e-07 NB-ARC domain
WHD_ROQ1 PF23282 424 - 493 2e-19 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 193
Acc36I ACCTGC 1 cut(s) 193
AccB1I GGYRCC 4 cut(s) 77, 1584, 1860, 2091
AccBSI CCGCTC 2 cut(s) 166, 366
AciI CCGC 6 cut(s) 88, 166, 366, 1374, 1501, 1588
AclWI GGATC 2 cut(s) 217, 2250
AcoI YGGCCR 1 cut(s) 1745
AcsI RAATTY 5 cut(s) 529, 1114, 1167, 2135, 2296
AcuI CTGAAG 4 cut(s) 55, 1119, 1506, 1719
AdeI CACNNNGTG 2 cut(s) 1441, 1923
AfaI GTAC 2 cut(s) 990, 1514
AfiI CCNNNNNNNGG 3 cut(s) 829, 1581, 1703
AflII CTTAAG 1 cut(s) 2222
AflIII ACRYGT 1 cut(s) 313
AjiI CACGTC 1 cut(s) 914
AjnI CCWGG 5 cut(s) 479, 931, 1580, 1742, 1855
AloI GAACNNNNNNTCC 2 cut(s) 573, 605
Alw26I GTCTC 5 cut(s) 680, 1404, 1712, 1719, 2223
AlwI GGATC 2 cut(s) 217, 2250
AlwNI CAGNNNCTG 1 cut(s) 410
Ama87I CYCGRG 3 cut(s) 547, 624, 1709
AoxI GGCC 5 cut(s) 3, 928, 1158, 1456, 1745
ApeKI GCWGC 4 cut(s) 446, 699, 1142, 2280
ApoI RAATTY 5 cut(s) 529, 1114, 1167, 2135, 2296
ArsI GACNNNNNNTTYG 2 cut(s) 1586, 1618
Asp700I GAANNNNTTC 1 cut(s) 1287
AspS9I GGNCC 4 cut(s) 732, 929, 1159, 1456
AsuC2I CCSGG 2 cut(s) 1460, 1494
AsuHPI GGTGA 1 cut(s) 662
AsuII TTCGAA 1 cut(s) 1683
AvaI CYCGRG 3 cut(s) 547, 624, 1709
AvaII GGWCC 1 cut(s) 732
BaeGI GKGCMC 1 cut(s) 1863
BaeI ACNNNNGTAYC 2 cut(s) 327, 360
BanI GGYRCC 4 cut(s) 77, 1584, 1860, 2091
BanII GRGCYC 1 cut(s) 1494
BbsI GAAGAC 2 cut(s) 850, 1233
BbvI GCAGC 4 cut(s) 458, 686, 1129, 2292
BccI CCATC 5 cut(s) 114, 252, 1664, 1780, 2179
BceAI ACGGC 4 cut(s) 831, 846, 1338, 1732
BciT130I CCWGG 5 cut(s) 481, 933, 1582, 1744, 1857
BcnI CCSGG 2 cut(s) 1460, 1494
BcoDI GTCTC 5 cut(s) 680, 1404, 1712, 1719, 2223
BfaI CTAG 5 cut(s) 957, 1506, 1608, 2168, 2367
BfmI CTRYAG 3 cut(s) 816, 1143, 2398
BfrI CTTAAG 1 cut(s) 2222
BfuAI ACCTGC 1 cut(s) 193
BisI GCNGC 4 cut(s) 447, 700, 1143, 2281
BlsI GCNGC 4 cut(s) 448, 701, 1144, 2282
BmcAI AGTACT 1 cut(s) 990
Bme1390I CCNGG 7 cut(s) 481, 933, 1460, 1494, 1582, 1744, 1857
Bme18I GGWCC 1 cut(s) 732
BmeT110I CYCGRG 3 cut(s) 547, 624, 1709
BmgBI CACGTC 1 cut(s) 914
BmgT120I GGNCC 4 cut(s) 732, 929, 1159, 1456
BmiI GGNNCC 6 cut(s) 79, 733, 734, 1586, 1862, 2093
BmrFI CCNGG 7 cut(s) 481, 933, 1460, 1494, 1582, 1744, 1857
BmsI GCATC 5 cut(s) 649, 682, 1158, 1422, 2109
BoxI GACNNNNGTC 1 cut(s) 1530
BpiI GAAGAC 2 cut(s) 850, 1233
Bpu14I TTCGAA 1 cut(s) 1683
BpuEI CTTGAG 4 cut(s) 182, 1285, 1611, 1949
BpuMI CCSGG 2 cut(s) 1460, 1494
Bsa29I ATCGAT 1 cut(s) 1875
BsaBI GATNNNNATC 2 cut(s) 156, 1422
BsaI GGTCTC 3 cut(s) 1404, 1712, 2223
BsaJI CCNNGG 6 cut(s) 480, 931, 1155, 1354, 1855, 1856
Bsc4I CCNNNNNNNGG 3 cut(s) 829, 1581, 1703
Bse118I RCCGGY 1 cut(s) 2094
Bse1I ACTGG 2 cut(s) 291, 1090
Bse3DI GCAATG 1 cut(s) 1296
Bse8I GATNNNNATC 2 cut(s) 156, 1422
BseBI CCWGG 5 cut(s) 481, 933, 1582, 1744, 1857
BseCI ATCGAT 1 cut(s) 1875
BseDI CCNNGG 6 cut(s) 480, 931, 1155, 1354, 1855, 1856
BseGI GGATG 8 cut(s) 33, 130, 490, 1149, 1437, 1647, 1955, 2295
BseJI GATNNNNATC 2 cut(s) 156, 1422
BseLI CCNNNNNNNGG 3 cut(s) 829, 1581, 1703
BseMI GCAATG 1 cut(s) 1296
BseMII CTCAG 5 cut(s) 79, 249, 402, 983, 1995
BseNI ACTGG 2 cut(s) 291, 1090
BseSI GKGCMC 1 cut(s) 1863
BseXI GCAGC 4 cut(s) 458, 686, 1129, 2292
BsgI GTGCAG 2 cut(s) 533, 1066
BshFI GGCC 5 cut(s) 5, 930, 1160, 1458, 1747
BshNI GGYRCC 4 cut(s) 77, 1584, 1860, 2091
BshVI ATCGAT 1 cut(s) 1875
BsiHKCI CYCGRG 3 cut(s) 547, 624, 1709
BsiSI CCGG 3 cut(s) 1459, 1494, 2095
BslFI GGGAC 3 cut(s) 745, 800, 1214
BslI CCNNNNNNNGG 3 cut(s) 829, 1581, 1703
BsmAI GTCTC 5 cut(s) 680, 1404, 1712, 1719, 2223
BsmBI CGTCTC 1 cut(s) 680
BsmFI GGGAC 3 cut(s) 745, 800, 1214
BsmI GAATGC 2 cut(s) 296, 1081
BsnI GGCC 5 cut(s) 5, 930, 1160, 1458, 1747
Bso31I GGTCTC 3 cut(s) 1404, 1712, 2223
BsoBI CYCGRG 3 cut(s) 547, 624, 1709
Bsp119I TTCGAA 1 cut(s) 1683
Bsp1286I GDGCHC 2 cut(s) 1494, 1863
Bsp1407I TGTACA 1 cut(s) 1512
Bsp143I GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
BspACI CCGC 6 cut(s) 88, 166, 366, 1374, 1501, 1588
BspANI GGCC 5 cut(s) 5, 930, 1160, 1458, 1747
BspCNI CTCAG 5 cut(s) 78, 248, 403, 984, 1994
BspDI ATCGAT 1 cut(s) 1875
BspLI GGNNCC 6 cut(s) 79, 733, 734, 1586, 1862, 2093
BspMAI CTGCAG 1 cut(s) 1147
BspMI ACCTGC 1 cut(s) 193
BspPI GGATC 2 cut(s) 217, 2250
BspQI GCTCTTC 2 cut(s) 1070, 1482
BspT104I TTCGAA 1 cut(s) 1683
BspT107I GGYRCC 4 cut(s) 77, 1584, 1860, 2091
BspTI CTTAAG 1 cut(s) 2222
BspTNI GGTCTC 3 cut(s) 1404, 1712, 2223
BsrBI CCGCTC 2 cut(s) 166, 366
BsrDI GCAATG 1 cut(s) 1296
BsrFI RCCGGY 1 cut(s) 2094
BsrGI TGTACA 1 cut(s) 1512
BsrI ACTGG 2 cut(s) 291, 1090
BssAI RCCGGY 1 cut(s) 2094
BssECI CCNNGG 6 cut(s) 480, 931, 1155, 1354, 1855, 1856
BssMI GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
BssT1I CCWWGG 1 cut(s) 1155
Bst2UI CCWGG 5 cut(s) 481, 933, 1582, 1744, 1857
Bst4CI ACNGT 4 cut(s) 340, 674, 824, 2074
Bst6I CTCTTC 5 cut(s) 16, 685, 1070, 1482, 1722
BstAFI CTTAAG 1 cut(s) 2222
BstAPI GCANNNNNTGC 1 cut(s) 511
BstAUI TGTACA 1 cut(s) 1512
BstBI TTCGAA 1 cut(s) 1683
BstC8I GCNNGC 4 cut(s) 697, 1081, 1147, 2096
BstDSI CCRYGG 1 cut(s) 1354
BstEII GGTNACC 1 cut(s) 1004
BstF5I GGATG 8 cut(s) 33, 130, 490, 1149, 1437, 1647, 1955, 2295
BstKTI GATC 6 cut(s) 212, 634, 1387, 1875, 1879, 2245
BstMAI GTCTC 5 cut(s) 680, 1404, 1712, 1719, 2223
BstMBI GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
BstMWI GCNNNNNNNGC 5 cut(s) 75, 511, 763, 1142, 1810
BstNI CCWGG 5 cut(s) 481, 933, 1582, 1744, 1857
BstNSI RCATGY 1 cut(s) 317
BstPAI GACNNNNGTC 1 cut(s) 1530
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 7 cut(s) 479, 931, 1458, 1492, 1580, 1742, 1855
BstSFI CTRYAG 3 cut(s) 816, 1143, 2398
BstSLI GKGCMC 1 cut(s) 1863
BstV1I GCAGC 4 cut(s) 458, 686, 1129, 2292
BstV2I GAAGAC 2 cut(s) 850, 1233
BstX2I RGATCY 1 cut(s) 2242
BstXI CCANNNNNNTGG 1 cut(s) 1856
BstYI RGATCY 1 cut(s) 2242
Bsu15I ATCGAT 1 cut(s) 1875
BsuRI GGCC 5 cut(s) 5, 930, 1160, 1458, 1747
BsuTUI ATCGAT 1 cut(s) 1875
BtgI CCRYGG 1 cut(s) 1354
BtrI CACGTC 1 cut(s) 914
BtsCI GGATG 8 cut(s) 33, 130, 490, 1149, 1437, 1647, 1955, 2295
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 2 cut(s) 840, 1083
BveI ACCTGC 1 cut(s) 193
Cac8I GCNNGC 4 cut(s) 697, 1081, 1147, 2096
CaiI CAGNNNCTG 1 cut(s) 410
Cfr10I RCCGGY 1 cut(s) 2094
Cfr13I GGNCC 4 cut(s) 732, 929, 1159, 1456
ClaI ATCGAT 1 cut(s) 1875
Csp6I GTAC 2 cut(s) 989, 1513
CspCI CAANNNNNGTGG 2 cut(s) 634, 669
CviAII CATG 8 cut(s) 314, 1010, 1129, 1197, 1231, 1535, 1576, 2131
CviQI GTAC 2 cut(s) 989, 1513
DpnI GATC 6 cut(s) 211, 633, 1386, 1874, 1878, 2244
DpnII GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
DraI TTTAAA 3 cut(s) 195, 1347, 2334
DraIII CACNNNGTG 2 cut(s) 1441, 1923
EaeI YGGCCR 1 cut(s) 1745
Eam1104I CTCTTC 5 cut(s) 16, 685, 1070, 1482, 1722
EarI CTCTTC 5 cut(s) 16, 685, 1070, 1482, 1722
Eco130I CCWWGG 1 cut(s) 1155
Eco24I GRGCYC 1 cut(s) 1494
Eco31I GGTCTC 3 cut(s) 1404, 1712, 2223
Eco32I GATATC 3 cut(s) 802, 1736, 2160
Eco47I GGWCC 1 cut(s) 732
Eco57I CTGAAG 4 cut(s) 55, 1119, 1506, 1719
Eco88I CYCGRG 3 cut(s) 547, 624, 1709
Eco91I GGTNACC 1 cut(s) 1004
EcoO109I RGGNCCY 1 cut(s) 732
EcoO65I GGTNACC 1 cut(s) 1004
EcoRI GAATTC 2 cut(s) 2135, 2296
EcoRII CCWGG 5 cut(s) 479, 931, 1580, 1742, 1855
EcoRV GATATC 3 cut(s) 802, 1736, 2160
EcoT14I CCWWGG 1 cut(s) 1155
EcoT38I GRGCYC 1 cut(s) 1494
ErhI CCWWGG 1 cut(s) 1155
Esp3I CGTCTC 1 cut(s) 680
FaeI CATG 8 cut(s) 317, 1013, 1132, 1200, 1234, 1538, 1579, 2134
FaqI GGGAC 3 cut(s) 745, 800, 1214
FatI CATG 8 cut(s) 313, 1009, 1128, 1196, 1230, 1534, 1575, 2130
FauI CCCGC 3 cut(s) 95, 159, 359
FauNDI CATATG 1 cut(s) 1809
Fnu4HI GCNGC 4 cut(s) 447, 700, 1143, 2281
FokI GGATG 8 cut(s) 20, 137, 497, 1136, 1444, 1654, 1962, 2302
FriOI GRGCYC 1 cut(s) 1494
Fsp4HI GCNGC 4 cut(s) 447, 700, 1143, 2281
FspBI CTAG 5 cut(s) 957, 1506, 1608, 2168, 2367
GluI GCNGC 4 cut(s) 447, 700, 1143, 2281
HaeIII GGCC 5 cut(s) 5, 930, 1160, 1458, 1747
HapII CCGG 3 cut(s) 1459, 1494, 2095
Hin1II CATG 8 cut(s) 317, 1013, 1132, 1200, 1234, 1538, 1579, 2134
HincII GTYRAC 4 cut(s) 311, 880, 1122, 1471
HindII GTYRAC 4 cut(s) 311, 880, 1122, 1471
HindIII AAGCTT 2 cut(s) 764, 2066
HpaI GTTAAC 1 cut(s) 1122
HpaII CCGG 3 cut(s) 1459, 1494, 2095
HphI GGTGA 1 cut(s) 662
Hpy166II GTNNAC 5 cut(s) 311, 880, 1122, 1471, 1515
Hpy8I GTNNAC 5 cut(s) 311, 880, 1122, 1471, 1515
HpyAV CCTTC 8 cut(s) 421, 716, 1273, 1632, 1694, 2021, 2052, 2214
HpyCH4III ACNGT 4 cut(s) 340, 674, 824, 2074
HpyCH4IV ACGT 2 cut(s) 913, 923
HpyF10VI GCNNNNNNNGC 5 cut(s) 75, 511, 763, 1142, 1810
HpySE526I ACGT 2 cut(s) 913, 923
Hsp92II CATG 8 cut(s) 317, 1013, 1132, 1200, 1234, 1538, 1579, 2134
KflI GGGWCCC 1 cut(s) 732
KroI GCCGGC 1 cut(s) 2094
KroNI GCCGGC 1 cut(s) 2096
KspAI GTTAAC 1 cut(s) 1122
Kzo9I GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
LguI GCTCTTC 2 cut(s) 1070, 1482
LmnI GCTCC 2 cut(s) 647, 1236
Lsp1109I GCAGC 4 cut(s) 458, 686, 1129, 2292
LweI GCATC 5 cut(s) 649, 682, 1158, 1422, 2109
MaeI CTAG 5 cut(s) 957, 1506, 1608, 2168, 2367
MaeII ACGT 2 cut(s) 913, 923
MaeIII GTNAC 3 cut(s) 919, 1004, 2255
MalI GATC 6 cut(s) 211, 633, 1386, 1874, 1878, 2244
MbiI CCGCTC 2 cut(s) 166, 366
MboI GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
MfeI CAATTG 4 cut(s) 1566, 2284, 2352, 2379
MflI RGATCY 1 cut(s) 2242
MhlI GDGCHC 2 cut(s) 1494, 1863
MlyI GAGTC 5 cut(s) 416, 551, 1721, 1996, 2419
MmeI TCCRAC 2 cut(s) 553, 559
MroNI GCCGGC 1 cut(s) 2094
MroXI GAANNNNTTC 1 cut(s) 1287
MslI CAYNNNNRTG 2 cut(s) 610, 1590
MspCI CTTAAG 1 cut(s) 2222
MspI CCGG 3 cut(s) 1459, 1494, 2095
MspR9I CCNGG 7 cut(s) 481, 933, 1460, 1494, 1582, 1744, 1857
MunI CAATTG 4 cut(s) 1566, 2284, 2352, 2379
Mva1269I GAATGC 2 cut(s) 296, 1081
MvaI CCWGG 5 cut(s) 481, 933, 1582, 1744, 1857
MwoI GCNNNNNNNGC 5 cut(s) 75, 511, 763, 1142, 1810
NaeI GCCGGC 1 cut(s) 2096
NciI CCSGG 2 cut(s) 1460, 1494
NdeI CATATG 1 cut(s) 1809
NdeII GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
NgoMIV GCCGGC 1 cut(s) 2094
NlaIII CATG 8 cut(s) 317, 1013, 1132, 1200, 1234, 1538, 1579, 2134
NlaIV GGNNCC 6 cut(s) 79, 733, 734, 1586, 1862, 2093
NspI RCATGY 1 cut(s) 317
NspV TTCGAA 1 cut(s) 1683
PaeR7I CTCGAG 3 cut(s) 547, 624, 1709
PaqCI CACCTGC 1 cut(s) 193
PasI CCCWGGG 1 cut(s) 1856
PciI ACATGT 1 cut(s) 313
PciSI GCTCTTC 2 cut(s) 1070, 1482
PcsI WCGNNNNNNNCGW 1 cut(s) 631
PctI GAATGC 2 cut(s) 296, 1081
PdiI GCCGGC 1 cut(s) 2096
PdmI GAANNNNTTC 1 cut(s) 1287
PfeI GAWTC 8 cut(s) 467, 488, 499, 602, 942, 1106, 2080, 2269
PkrI GCNGC 4 cut(s) 448, 701, 1144, 2282
PleI GAGTC 5 cut(s) 415, 550, 1720, 1995, 2418
PpsI GAGTC 5 cut(s) 415, 550, 1720, 1995, 2418
PpuMI RGGWCCY 1 cut(s) 732
PscI ACATGT 1 cut(s) 313
PshAI GACNNNNGTC 1 cut(s) 1530
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 5 cut(s) 479, 931, 1580, 1742, 1855
PspEI GGTNACC 1 cut(s) 1004
PspGI CCWGG 5 cut(s) 479, 931, 1580, 1742, 1855
PspN4I GGNNCC 6 cut(s) 79, 733, 734, 1586, 1862, 2093
PspPI GGNCC 4 cut(s) 732, 929, 1159, 1456
PspPPI RGGWCCY 1 cut(s) 732
PspXI VCTCGAGB 1 cut(s) 547
PstI CTGCAG 1 cut(s) 1147
PstNI CAGNNNCTG 1 cut(s) 410
PsuI RGATCY 1 cut(s) 2242
RsaI GTAC 2 cut(s) 990, 1514
RsaNI GTAC 2 cut(s) 989, 1513
RseI CAYNNNNRTG 2 cut(s) 610, 1590
SapI GCTCTTC 2 cut(s) 1070, 1482
SatI GCNGC 4 cut(s) 447, 700, 1143, 2281
Sau3AI GATC 6 cut(s) 209, 631, 1384, 1872, 1876, 2242
Sau96I GGNCC 4 cut(s) 732, 929, 1159, 1456
ScaI AGTACT 1 cut(s) 990
SchI GAGTC 5 cut(s) 416, 551, 1721, 1996, 2419
ScrFI CCNGG 7 cut(s) 481, 933, 1460, 1494, 1582, 1744, 1857
SduI GDGCHC 2 cut(s) 1494, 1863
SfaNI GCATC 5 cut(s) 649, 682, 1158, 1422, 2109
SfcI CTRYAG 3 cut(s) 816, 1143, 2398
Sfr274I CTCGAG 3 cut(s) 547, 624, 1709
SfuI TTCGAA 1 cut(s) 1683
SinI GGWCC 1 cut(s) 732
SlaI CTCGAG 3 cut(s) 547, 624, 1709
SmiI ATTTAAAT 1 cut(s) 1347
SmiMI CAYNNNNRTG 2 cut(s) 610, 1590
SmlI CTYRAG 8 cut(s) 161, 547, 624, 1264, 1626, 1709, 1928, 2222
SmoI CTYRAG 8 cut(s) 161, 547, 624, 1264, 1626, 1709, 1928, 2222
SsiI CCGC 6 cut(s) 88, 166, 366, 1374, 1501, 1588
SspI AATATT 2 cut(s) 1287, 1996
SspMI CTAG 5 cut(s) 957, 1506, 1608, 2168, 2367
StyD4I CCNGG 7 cut(s) 479, 931, 1458, 1492, 1580, 1742, 1855
StyI CCWWGG 1 cut(s) 1155
SwaI ATTTAAAT 1 cut(s) 1347
TaaI ACNGT 4 cut(s) 340, 674, 824, 2074
TaiI ACGT 2 cut(s) 916, 926
TaqI TCGA 9 cut(s) 204, 256, 548, 586, 625, 690, 1683, 1710, 1875
TatI WGTACW 2 cut(s) 988, 1512
TfiI GAWTC 8 cut(s) 467, 488, 499, 602, 942, 1106, 2080, 2269
TscAI CASTG 2 cut(s) 840, 1090
TseI GCWGC 4 cut(s) 446, 699, 1142, 2280
TspDTI ATGAA 8 cut(s) 189, 390, 570, 850, 1065, 1185, 1796, 2196
TspGWI ACGGA 1 cut(s) 211
TspRI CASTG 2 cut(s) 840, 1090
Vha464I CTTAAG 1 cut(s) 2222
VpaK11BI GGWCC 1 cut(s) 732
XapI RAATTY 5 cut(s) 529, 1114, 1167, 2135, 2296
XceI RCATGY 1 cut(s) 317
XcmI CCANNNNNNNNNTGG 1 cut(s) 2283
XhoI CTCGAG 3 cut(s) 547, 624, 1709
XmnI GAANNNNTTC 1 cut(s) 1287
XspI CTAG 5 cut(s) 957, 1506, 1608, 2168, 2367
ZrmI AGTACT 1 cut(s) 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.