TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1004, 1365, 1713 |
| AccI | GTMKAC | 1 cut(s) | 2591 |
| AccII | CGCG | 2 cut(s) | 108, 615 |
| AccIII | TCCGGA | 2 cut(s) | 144, 1969 |
| AciI | CCGC | 7 cut(s) | 26, 106, 204, 373, 613, 1410, 1427 |
| AclI | AACGTT | 1 cut(s) | 421 |
| AclWI | GGATC | 4 cut(s) | 353, 580, 932, 1980 |
| AcsI | RAATTY | 7 cut(s) | 740, 1284, 1707, 1838, 2003, 2271, 2501 |
| AcuI | CTGAAG | 2 cut(s) | 1076, 1923 |
| AdeI | CACNNNGTG | 1 cut(s) | 76 |
| AfaI | GTAC | 4 cut(s) | 1754, 2017, 2216, 2370 |
| AfeI | AGCGCT | 1 cut(s) | 1742 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 62, 97, 457, 619, 907 |
| AflII | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| AflIII | ACRYGT | 4 cut(s) | 75, 367, 1449, 1635 |
| AjiI | CACGTC | 2 cut(s) | 76, 1638 |
| AjnI | CCWGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| Alw21I | GWGCWC | 1 cut(s) | 237 |
| AlwI | GGATC | 4 cut(s) | 353, 580, 932, 1980 |
| Ama87I | CYCGRG | 2 cut(s) | 179, 2471 |
| Aor13HI | TCCGGA | 2 cut(s) | 144, 1969 |
| Aor51HI | AGCGCT | 1 cut(s) | 1742 |
| AoxI | GGCC | 3 cut(s) | 592, 1765, 2735 |
| ApoI | RAATTY | 7 cut(s) | 740, 1284, 1707, 1838, 2003, 2271, 2501 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1089, 1269, 2817 |
| AspLEI | GCGC | 2 cut(s) | 450, 1743 |
| AspS9I | GGNCC | 6 cut(s) | 200, 592, 910, 983, 2181, 2686 |
| AsuHPI | GGTGA | 3 cut(s) | 109, 1733, 1836 |
| AvaI | CYCGRG | 2 cut(s) | 179, 2471 |
| AvaII | GGWCC | 5 cut(s) | 200, 910, 983, 2181, 2686 |
| AxyI | CCTNAGG | 1 cut(s) | 1533 |
| BaeGI | GKGCMC | 1 cut(s) | 860 |
| BanII | GRGCYC | 2 cut(s) | 237, 2400 |
| BauI | CACGAG | 1 cut(s) | 711 |
| BbsI | GAAGAC | 2 cut(s) | 1443, 1911 |
| Bbv12I | GWGCWC | 1 cut(s) | 237 |
| BbvCI | CCTCAGC | 1 cut(s) | 1569 |
| BccI | CCATC | 7 cut(s) | 370, 735, 1172, 1307, 1802, 1840, 2687 |
| BceAI | ACGGC | 1 cut(s) | 885 |
| BciT130I | CCWGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| BciVI | GTATCC | 1 cut(s) | 1396 |
| BfaI | CTAG | 3 cut(s) | 653, 1011, 2603 |
| BfmI | CTRYAG | 1 cut(s) | 666 |
| BfoI | RGCGCY | 1 cut(s) | 1744 |
| BfrI | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| BfuI | GTATCC | 1 cut(s) | 1396 |
| Bme1390I | CCNGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| Bme18I | GGWCC | 5 cut(s) | 200, 910, 983, 2181, 2686 |
| BmeT110I | CYCGRG | 2 cut(s) | 179, 2471 |
| BmgBI | CACGTC | 2 cut(s) | 76, 1638 |
| BmgT120I | GGNCC | 6 cut(s) | 200, 592, 910, 983, 2181, 2686 |
| BmiI | GGNNCC | 5 cut(s) | 202, 1210, 1606, 2183, 2529 |
| BmrFI | CCNGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| BmrI | ACTGGG | 1 cut(s) | 1813 |
| BmsI | GCATC | 7 cut(s) | 317, 451, 961, 1414, 1476, 2180, 2548 |
| BmuI | ACTGGG | 1 cut(s) | 1813 |
| BpiI | GAAGAC | 2 cut(s) | 1443, 1911 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2467, 2499, 3018, 3050, 3020, 3052 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1569 |
| BpuEI | CTTGAG | 3 cut(s) | 197, 1367, 2074 |
| BsaAI | YACGTR | 2 cut(s) | 355, 2144 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1812 |
| BsaJI | CCNNGG | 4 cut(s) | 61, 91, 2321, 2656 |
| BsaWI | WCCGGW | 6 cut(s) | 144, 1607, 1846, 1969, 2646, 2796 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 62, 97, 457, 619, 907 |
| Bse1I | ACTGG | 7 cut(s) | 120, 579, 1266, 1583, 1808, 2117, 2418 |
| Bse21I | CCTNAGG | 1 cut(s) | 1533 |
| Bse3DI | GCAATG | 1 cut(s) | 1826 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1812 |
| BseAI | TCCGGA | 2 cut(s) | 144, 1969 |
| BseBI | CCWGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| BseDI | CCNNGG | 4 cut(s) | 61, 91, 2321, 2656 |
| BseGI | GGATG | 8 cut(s) | 292, 332, 466, 575, 609, 1297, 1491, 1813 |
| BseJI | GATNNNNATC | 1 cut(s) | 1812 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 62, 97, 457, 619, 907 |
| BseMI | GCAATG | 1 cut(s) | 1826 |
| BseMII | CTCAG | 7 cut(s) | 97, 507, 989, 1560, 1725, 1994, 2722 |
| BseNI | ACTGG | 7 cut(s) | 120, 579, 1266, 1583, 1808, 2117, 2418 |
| BseRI | GAGGAG | 2 cut(s) | 201, 1053 |
| BseSI | GKGCMC | 1 cut(s) | 860 |
| BsgI | GTGCAG | 1 cut(s) | 1689 |
| Bsh1236I | CGCG | 2 cut(s) | 108, 615 |
| BshFI | GGCC | 3 cut(s) | 594, 1767, 2737 |
| BsiHKAI | GWGCWC | 1 cut(s) | 237 |
| BsiHKCI | CYCGRG | 2 cut(s) | 179, 2471 |
| BsiSI | CCGG | 6 cut(s) | 145, 1608, 1847, 1970, 2647, 2797 |
| BslFI | GGGAC | 5 cut(s) | 186, 2018, 2167, 2365, 2639 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 62, 97, 457, 619, 907 |
| BsmBI | CGTCTC | 2 cut(s) | 183, 1779 |
| BsmFI | GGGAC | 5 cut(s) | 186, 2018, 2167, 2365, 2639 |
| BsmI | GAATGC | 1 cut(s) | 1182 |
| BsnI | GGCC | 3 cut(s) | 594, 1767, 2737 |
| BsoBI | CYCGRG | 2 cut(s) | 179, 2471 |
| Bsp1286I | GDGCHC | 3 cut(s) | 237, 860, 2400 |
| Bsp13I | TCCGGA | 2 cut(s) | 144, 1969 |
| Bsp1407I | TGTACA | 1 cut(s) | 2015 |
| Bsp143I | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| BspACI | CCGC | 7 cut(s) | 26, 106, 204, 373, 613, 1410, 1427 |
| BspANI | GGCC | 3 cut(s) | 594, 1767, 2737 |
| BspCNI | CTCAG | 7 cut(s) | 96, 508, 988, 1561, 1726, 1993, 2721 |
| BspEI | TCCGGA | 2 cut(s) | 144, 1969 |
| BspFNI | CGCG | 2 cut(s) | 108, 615 |
| BspLI | GGNNCC | 5 cut(s) | 202, 1210, 1606, 2183, 2529 |
| BspPI | GGATC | 4 cut(s) | 353, 580, 932, 1980 |
| BspQI | GCTCTTC | 1 cut(s) | 2571 |
| BspTI | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| BsrDI | GCAATG | 1 cut(s) | 1826 |
| BsrGI | TGTACA | 1 cut(s) | 2015 |
| BsrI | ACTGG | 7 cut(s) | 120, 579, 1266, 1583, 1808, 2117, 2418 |
| BssECI | CCNNGG | 4 cut(s) | 61, 91, 2321, 2656 |
| BssMI | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| BssSI | CACGAG | 1 cut(s) | 711 |
| Bst2BI | CACGAG | 1 cut(s) | 711 |
| Bst2UI | CCWGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| Bst4CI | ACNGT | 5 cut(s) | 113, 667, 2015, 2219, 2683 |
| Bst6I | CTCTTC | 5 cut(s) | 43, 274, 1782, 2154, 2571 |
| BstAFI | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2250 |
| BstAUI | TGTACA | 1 cut(s) | 2015 |
| BstBAI | YACGTR | 2 cut(s) | 355, 2144 |
| BstC8I | GCNNGC | 1 cut(s) | 2169 |
| BstF5I | GGATG | 8 cut(s) | 292, 332, 466, 575, 609, 1297, 1491, 1813 |
| BstFNI | CGCG | 2 cut(s) | 108, 615 |
| BstH2I | RGCGCY | 1 cut(s) | 1744 |
| BstHHI | GCGC | 2 cut(s) | 450, 1743 |
| BstKTI | GATC | 7 cut(s) | 361, 575, 875, 940, 1975, 3070, 3109 |
| BstMBI | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 404, 1040, 1870, 2250, 2536, 2734 |
| BstNI | CCWGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| BstNSI | RCATGY | 4 cut(s) | 371, 1359, 1453, 1687 |
| BstSCI | CCNGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| BstSFI | CTRYAG | 1 cut(s) | 666 |
| BstSLI | GKGCMC | 1 cut(s) | 860 |
| BstUI | CGCG | 2 cut(s) | 108, 615 |
| BstV2I | GAAGAC | 2 cut(s) | 1443, 1911 |
| BstX2I | RGATCY | 2 cut(s) | 358, 1972 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1916, 2276, 3016 |
| BstYI | RGATCY | 2 cut(s) | 358, 1972 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1533 |
| BsuI | GTATCC | 1 cut(s) | 1396 |
| BsuRI | GGCC | 3 cut(s) | 594, 1767, 2737 |
| BtrI | CACGTC | 2 cut(s) | 76, 1638 |
| BtsCI | GGATG | 8 cut(s) | 292, 332, 466, 575, 609, 1297, 1491, 1813 |
| BtsI | GCAGTG | 2 cut(s) | 42, 1219 |
| BtsIMutI | CAGTG | 4 cut(s) | 42, 586, 1219, 2124 |
| Cac8I | GCNNGC | 1 cut(s) | 2169 |
| CfoI | GCGC | 2 cut(s) | 450, 1743 |
| Cfr13I | GGNCC | 6 cut(s) | 200, 592, 910, 983, 2181, 2686 |
| CseI | GACGC | 1 cut(s) | 2446 |
| Csp6I | GTAC | 4 cut(s) | 1753, 2016, 2215, 2369 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1143, 1178 |
| CviQI | GTAC | 4 cut(s) | 1753, 2016, 2215, 2369 |
| DpnI | GATC | 7 cut(s) | 360, 574, 874, 939, 1974, 3069, 3108 |
| DpnII | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| DraI | TTTAAA | 1 cut(s) | 2553 |
| DraIII | CACNNNGTG | 1 cut(s) | 76 |
| Eam1104I | CTCTTC | 5 cut(s) | 43, 274, 1782, 2154, 2571 |
| EarI | CTCTTC | 5 cut(s) | 43, 274, 1782, 2154, 2571 |
| Ecl136II | GAGCTC | 1 cut(s) | 235 |
| Eco147I | AGGCCT | 2 cut(s) | 1767, 2737 |
| Eco24I | GRGCYC | 2 cut(s) | 237, 2400 |
| Eco32I | GATATC | 4 cut(s) | 196, 1576, 1814, 3014 |
| Eco47I | GGWCC | 5 cut(s) | 200, 910, 983, 2181, 2686 |
| Eco47III | AGCGCT | 1 cut(s) | 1742 |
| Eco53kI | GAGCTC | 1 cut(s) | 235 |
| Eco57I | CTGAAG | 2 cut(s) | 1076, 1923 |
| Eco81I | CCTNAGG | 1 cut(s) | 1533 |
| Eco88I | CYCGRG | 2 cut(s) | 179, 2471 |
| EcoICRI | GAGCTC | 1 cut(s) | 235 |
| EcoO109I | RGGNCCY | 2 cut(s) | 592, 910 |
| EcoRI | GAATTC | 1 cut(s) | 1284 |
| EcoRII | CCWGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| EcoRV | GATATC | 4 cut(s) | 196, 1576, 1814, 3014 |
| EcoT22I | ATGCAT | 2 cut(s) | 1491, 1689 |
| EcoT38I | GRGCYC | 2 cut(s) | 237, 2400 |
| Esp3I | CGTCTC | 2 cut(s) | 183, 1779 |
| FaqI | GGGAC | 5 cut(s) | 186, 2018, 2167, 2365, 2639 |
| FauI | CCCGC | 3 cut(s) | 113, 211, 1420 |
| FauNDI | CATATG | 2 cut(s) | 674, 1869 |
| FblI | GTMKAC | 1 cut(s) | 2591 |
| FokI | GGATG | 8 cut(s) | 299, 339, 473, 562, 616, 1304, 1498, 1820 |
| FriOI | GRGCYC | 2 cut(s) | 237, 2400 |
| FspBI | CTAG | 3 cut(s) | 653, 1011, 2603 |
| GlaI | GCGC | 2 cut(s) | 449, 1742 |
| HaeII | RGCGCY | 1 cut(s) | 1744 |
| HaeIII | GGCC | 3 cut(s) | 594, 1767, 2737 |
| HapII | CCGG | 6 cut(s) | 145, 1608, 1847, 1970, 2647, 2797 |
| HgaI | GACGC | 1 cut(s) | 2446 |
| HhaI | GCGC | 2 cut(s) | 450, 1743 |
| Hin6I | GCGC | 2 cut(s) | 448, 1741 |
| HinP1I | GCGC | 2 cut(s) | 448, 1741 |
| HincII | GTYRAC | 2 cut(s) | 947, 2592 |
| HindII | GTYRAC | 2 cut(s) | 947, 2592 |
| HindIII | AAGCTT | 4 cut(s) | 747, 1652, 2060, 2192 |
| HpaII | CCGG | 6 cut(s) | 145, 1608, 1847, 1970, 2647, 2797 |
| HphI | GGTGA | 3 cut(s) | 109, 1733, 1836 |
| Hpy166II | GTNNAC | 2 cut(s) | 947, 2592 |
| Hpy8I | GTNNAC | 2 cut(s) | 947, 2592 |
| Hpy99I | CGWCG | 2 cut(s) | 77, 113 |
| HpyAV | CCTTC | 7 cut(s) | 583, 901, 1100, 1684, 1757, 1766, 1923 |
| HpyCH4III | ACNGT | 5 cut(s) | 113, 667, 2015, 2219, 2683 |
| HpyCH4IV | ACGT | 6 cut(s) | 75, 354, 421, 1637, 2143, 2743 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 404, 1040, 1870, 2250, 2536, 2734 |
| HpySE526I | ACGT | 6 cut(s) | 75, 354, 421, 1637, 2143, 2743 |
| HspAI | GCGC | 2 cut(s) | 448, 1741 |
| Kpn2I | TCCGGA | 2 cut(s) | 144, 1969 |
| Kzo9I | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| LguI | GCTCTTC | 1 cut(s) | 2571 |
| LmnI | GCTCC | 6 cut(s) | 1040, 1537, 2527, 2536, 2623, 2725 |
| LweI | GCATC | 7 cut(s) | 317, 451, 961, 1414, 1476, 2180, 2548 |
| MaeI | CTAG | 3 cut(s) | 653, 1011, 2603 |
| MaeII | ACGT | 6 cut(s) | 75, 354, 421, 1637, 2143, 2743 |
| MalI | GATC | 7 cut(s) | 360, 574, 874, 939, 1974, 3069, 3108 |
| MboI | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| MfeI | CAATTG | 2 cut(s) | 1518, 2358 |
| MflI | RGATCY | 2 cut(s) | 358, 1972 |
| MhlI | GDGCHC | 3 cut(s) | 237, 860, 2400 |
| MlyI | GAGTC | 4 cut(s) | 171, 527, 641, 1993 |
| MmeI | TCCRAC | 5 cut(s) | 943, 1380, 2601, 2681, 2703 |
| Mph1103I | ATGCAT | 2 cut(s) | 1491, 1689 |
| MroI | TCCGGA | 2 cut(s) | 144, 1969 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1089, 1269, 2817 |
| MslI | CAYNNNNRTG | 3 cut(s) | 129, 1107, 1640 |
| MspA1I | CMGCKG | 1 cut(s) | 398 |
| MspCI | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| MspI | CCGG | 6 cut(s) | 145, 1608, 1847, 1970, 2647, 2797 |
| MspR9I | CCNGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| MunI | CAATTG | 2 cut(s) | 1518, 2358 |
| Mva1269I | GAATGC | 1 cut(s) | 1182 |
| MvaI | CCWGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| MvnI | CGCG | 2 cut(s) | 108, 615 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 404, 1040, 1870, 2250, 2536, 2734 |
| NdeI | CATATG | 2 cut(s) | 674, 1869 |
| NdeII | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| NlaIV | GGNNCC | 5 cut(s) | 202, 1210, 1606, 2183, 2529 |
| NsiI | ATGCAT | 2 cut(s) | 1491, 1689 |
| NspI | RCATGY | 4 cut(s) | 371, 1359, 1453, 1687 |
| PaeR7I | CTCGAG | 2 cut(s) | 179, 2471 |
| PceI | AGGCCT | 2 cut(s) | 1767, 2737 |
| PciI | ACATGT | 2 cut(s) | 367, 1449 |
| PciSI | GCTCTTC | 1 cut(s) | 2571 |
| PctI | GAATGC | 1 cut(s) | 1182 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1089, 1269, 2817 |
| PfoI | TCCNGGA | 1 cut(s) | 985 |
| PleI | GAGTC | 4 cut(s) | 171, 526, 641, 1992 |
| PpsI | GAGTC | 4 cut(s) | 171, 526, 641, 1992 |
| Ppu21I | YACGTR | 2 cut(s) | 355, 2144 |
| PpuMI | RGGWCCY | 1 cut(s) | 910 |
| PscI | ACATGT | 2 cut(s) | 367, 1449 |
| PsiI | TTATAA | 3 cut(s) | 1004, 1365, 1713 |
| Psp124BI | GAGCTC | 1 cut(s) | 237 |
| Psp1406I | AACGTT | 1 cut(s) | 421 |
| Psp5II | RGGWCCY | 1 cut(s) | 910 |
| Psp6I | CCWGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| PspGI | CCWGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| PspN4I | GGNNCC | 5 cut(s) | 202, 1210, 1606, 2183, 2529 |
| PspPI | GGNCC | 6 cut(s) | 200, 592, 910, 983, 2181, 2686 |
| PspPPI | RGGWCCY | 1 cut(s) | 910 |
| PsuI | RGATCY | 2 cut(s) | 358, 1972 |
| PvuII | CAGCTG | 1 cut(s) | 398 |
| RsaI | GTAC | 4 cut(s) | 1754, 2017, 2216, 2370 |
| RsaNI | GTAC | 4 cut(s) | 1753, 2016, 2215, 2369 |
| RseI | CAYNNNNRTG | 3 cut(s) | 129, 1107, 1640 |
| SacI | GAGCTC | 1 cut(s) | 237 |
| SalI | GTCGAC | 1 cut(s) | 2590 |
| SapI | GCTCTTC | 1 cut(s) | 2571 |
| Sau3AI | GATC | 7 cut(s) | 358, 572, 872, 937, 1972, 3067, 3106 |
| Sau96I | GGNCC | 6 cut(s) | 200, 592, 910, 983, 2181, 2686 |
| SchI | GAGTC | 4 cut(s) | 171, 527, 641, 1993 |
| ScrFI | CCNGG | 5 cut(s) | 596, 987, 2258, 2323, 2658 |
| SduI | GDGCHC | 3 cut(s) | 237, 860, 2400 |
| SfaNI | GCATC | 7 cut(s) | 317, 451, 961, 1414, 1476, 2180, 2548 |
| SfcI | CTRYAG | 1 cut(s) | 666 |
| Sfr274I | CTCGAG | 2 cut(s) | 179, 2471 |
| SinI | GGWCC | 5 cut(s) | 200, 910, 983, 2181, 2686 |
| SlaI | CTCGAG | 2 cut(s) | 179, 2471 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 129, 1107, 1640 |
| SmlI | CTYRAG | 8 cut(s) | 179, 212, 1028, 1196, 1346, 2089, 2228, 2471 |
| SmoI | CTYRAG | 8 cut(s) | 179, 212, 1028, 1196, 1346, 2089, 2228, 2471 |
| SseBI | AGGCCT | 2 cut(s) | 1767, 2737 |
| SsiI | CCGC | 7 cut(s) | 26, 106, 204, 373, 613, 1410, 1427 |
| SspI | AATATT | 1 cut(s) | 2420 |
| SspMI | CTAG | 3 cut(s) | 653, 1011, 2603 |
| SstI | GAGCTC | 1 cut(s) | 237 |
| StuI | AGGCCT | 2 cut(s) | 1767, 2737 |
| StyD4I | CCNGG | 5 cut(s) | 594, 985, 2256, 2321, 2656 |
| TaaI | ACNGT | 5 cut(s) | 113, 667, 2015, 2219, 2683 |
| TaiI | ACGT | 6 cut(s) | 78, 357, 424, 1640, 2146, 2746 |
| TaqI | TCGA | 6 cut(s) | 156, 180, 1761, 2472, 2591, 2691 |
| TaqII | GACCGA | 1 cut(s) | 188 |
| TatI | WGTACW | 2 cut(s) | 2015, 2214 |
| TauI | GCSGC | 3 cut(s) | 29, 615, 1413 |
| TscAI | CASTG | 4 cut(s) | 49, 586, 1226, 2124 |
| TspDTI | ATGAA | 9 cut(s) | 119, 620, 920, 1074, 1091, 1092, 1098, 1646, 1740 |
| TspGWI | ACGGA | 2 cut(s) | 904, 1176 |
| TspRI | CASTG | 4 cut(s) | 49, 586, 1226, 2124 |
| Vha464I | CTTAAG | 3 cut(s) | 1028, 1196, 2228 |
| VpaK11BI | GGWCC | 5 cut(s) | 200, 910, 983, 2181, 2686 |
| XapI | RAATTY | 7 cut(s) | 740, 1284, 1707, 1838, 2003, 2271, 2501 |
| XbaI | TCTAGA | 1 cut(s) | 652 |
| XceI | RCATGY | 4 cut(s) | 371, 1359, 1453, 1687 |
| XhoI | CTCGAG | 2 cut(s) | 179, 2471 |
| XmiI | GTMKAC | 1 cut(s) | 2591 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1089, 1269, 2817 |
| XspI | CTAG | 3 cut(s) | 653, 1011, 2603 |
| Zsp2I | ATGCAT | 2 cut(s) | 1491, 1689 |