pycom05g13230

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
16806660 .. 16811859
5200 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13230.5

Sequence Viewer

Length: 3894 bp
ATGGAATGCAACAAAAAAAGAGAAGGCCAGTTCGTGATACCCATTTTTTACCACACCGATGTATCGGATGTACGAGACCAACAGGGGAGTTATGCGGCTGGATTTGCTCAACACCAAAGTATCGACAAGGTGGACAAGTGGAAAGAGGCTTTGAAGAATGCAGCCAATATATCTGGGTTTCCTCATCCAAAAAATGCAGGGATGGATACCGATTTAATTAAGAAAGTTGTAAAGGATATTTGGACCAAACTGGGTCGCGAATCATCCTGCGATTTAGAGGGCCTGGTTGGAATTCAAAGCAGCATCAAGAAAGTTGAAGAGCTATTGGACATTCATTCAAAGGACGGTTGCATTGCTGTAGGTATTTGGGGAATGGGTGGTATTGGCAAGACCACCCTTGCTGAAGCCGTATTTCACAAACACTCTTCTAAATTCGATGCCTGTTGTTTTCTTAGAAATGTTACAGAAAAAGAACAAAAAGATGGGCTAGAGAACTTGGAAAAAACACTTCTTAAGGATATATTAAAGGAAGAAGGTCTATCCATAGGATCAGATATTGTTCGACGTGGGCTCAGCCGTACAAAGGTCCTCATTGTTCTTGATGATGTAAGTGATTCAACGAAAATGGAACGTTTAGCTGGCAAGGGTCTTCGGTATGGCACTGGAAGTAGAATCATTATCACAAGTAGAGATAGGAGAACACTTACTGTTGAAGAAGGTAAGATCTACAAGGTTGAGGGATTAAAACCAGAAAAGGCTCTTCAGTTCTTCTATTTGCGTGCTTTCAAAAATAACAGTACTCCGGGAACATATTTTAAGGAGTTGGCAGAAAAGGCGGTTTATTACGCCAGAGGCGTTCCTTTAGCTCTTAAGCTTTTGGGGTCCTCATTCCTATATTGCGAGAGCATAGAAGACTGGAAAGATGAATTGGACAAATTGGAAGAAAGTCCCAATGAAGATGTTCAAAGAGTGTTGAAACTAAGTTATGATCGATTGGGAAGTATTGAGAAGGAGATATTTTTGGATATAGCATGTTTTCATAGAGGGATGGATGTGAATGAGGTAAAAAAAAGGTTAGCTATCCGTACACACTCTGTGGCAGCCAGAATTAAAGTTCTCATTGATATGTCTCTCATATCAGTTCATTCAAAACAGGGACGAGAAACTATAGAGATACATGATCTGCTTGAAGAAATGGGAAGGACAATTGTTCTGAAACAAGGTATTGAAGATCCTTGTAAACGTAGTAGGTTGTTCAACGATGAGGATGTTTTTAATGTATTGAAAAGTAACAAGGAGACTCCAAATGTTCAAGCCATAAAGTTTAATTGGTCTCAGTGTGAAGAGCAACCATTTGAACCTGCAGACTTCAAAGTGATGTCTAACCTAAAATTGCTAATTGTTGATTACTATCCTGGCCATCCCCGCAAATTCACAACTTCTCTAGACCTTCCCAATTCTCTTCGTTATCTTCACTGGTGGGGATATCTACTGGAATCTTTGCCATCAAAATTTTCTCCGGAAAATCTAGTTGAGCTTCATATGCCATATAGCCAAGTTAAGAAGCTTTGGAAAAAAGATGAGAGACTTGTGAACTTAGAAGTGATCGATCTGCATGACTCTATGTATCTAATGGAGGTCCCAAATCTCTTTGGGAGTCCAAAAATTGGGCACATAAATCTTTCAAACTGGAGAAGTTTGGTTGACATTCCTTCGTATTTTCAACATCTCCACAAGCTTACTCATCTTCATCTTCGACACTGCACCTGTCTCGAGTATCTTCCAGAGATGCCAAGAAGTATTAAATACTTAGACTTACAAAGTAGTGGTATAAAGGAGTTGCATGAATCAGTTTGGTCTAACGAAAATATTTCCTACTTGAATATAAGTCATTGCAAAGACCTTGAGAAACTGCCAAGCAACAGGTGTAAACTGAAAGTCTCTGGTTGTTTTAGTCTAGATGGCTGCACATCTCTTGGCGAGTTTTCTGAGCTTCCCAGGGATATAACTGAATTATCATTGGTTCGTTGCAGCAGTATTGTGAGTCTACCAATCAACATTTGGAAGTTGAAATATCTTAAGAAACTCAATCTCGATGGGTGCTCTGAATTTGAACATTTCCCGGAGATCTTGGAGCCAATAGAACATTTGGTGTCTCTTAGTTTGCGAGGGACAGCTGTACAAAAGCTTCCTTCGTCATTTGGAAATCTAATTGGGCTTCAAACTTTAGACCTTAGTGGCTGCAAGCACCTTAAGGTTGTCCCAACAAGAGATGTTGTAGCTGATTCTACTGCTGTTGTTGATGATGTCTCCCCAGAAGAGTATGATGTGTTTATCAGCTTCAGAGGTGAGGACACCCGCTTTGGTATTACCAGCCATCTTCATGTTGCCTTACTTCAGAAGAAAATTGAAACCTACATCGACAATAGACTTCAGAGAGGAGAAGAAATTGGACCTGCCCTTCTAGAAACAATCGAGAAATCCAAGATTTTGGTTATCATTTTCTCACAAAACTATGCGTCTTCCACATGGTGTTTGGATGAGCTTCTGCATATACTCAAATGCAGGGAAAGATATGGCCACATGGTCGTACCAGTATTCTACGACATCAATCCATCTGATGTACGAAAACAACACGGAACTTATGCGGATGCATTTGCTCAACTTGAAGAACGTTTTAAGGACAATATCGATAAGGTGTGCACGTGGAGGGCTGCTTTGACGAATGCAGCCAATCTATCTGGGTTTGATTATTCAAACAAATTCGGGAGGGAGGCAGATCTAATTAAGAATGTTGTCAATCATGTTTGGGCCAAAGTGATTTGTGAATCATCATGGGATTTAGAGGGCCCGGTTGGAATTGCAAGCCGCATTCAGCAAATTGAAGAGCTATTGGGCATTCATTCACAAGACGCTTGCATCATTGTTGGTATTTGGGGAATGGGTGGTATTGGCAAGACCACCCTTGCTGAAGTCGTATTTAACAAACTCTCTTCTAAATTCGAAGCCTGTTGTTTTCTTAGAAATGTTAGGGAGACAGAACAAAAAGGTGGGCTAGAACACTTGCAAAATAAACTTCTCAGTCAGATATTAGAGGAAGAAGGTCTATCCATAGGATCAACTTTTGTTCGAGCTAGGCTTAGCCGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAAATGGAAGGTTTAGTTGGCAATCGTCTTCGGTTTGGCACTGGAAGTAGAATCATTATCACAAGCAGAAATAGGGGCACACTTGGGCAAATTGTTGAAGGGGATAAAATCTACGAGGTTGGGAGATTAAAACCGGATGATGCTCGTCGGCTCTTCTATTTGCATGCTTCCAAGAGTATTCGTATAACAGATTATAAGGAGTTGGCAGAAAAGGCGATGCATTATGCCGGAGGCATTCCTTTAGCTCTTATACTTCTGGGGTCCTCATTCCTAAATTGCAAGAGCAAAGAAGACTTGGAAGATGAATTGGACAAATTGAAACAATTTCCCAATGAAAATATCCGGAGAGTATTGAGACTAAGTTATGATGGATTGGGAATAGCTGAGAAGGAGATATTTTTGGATATAGCATGTTTTTATAAAGGGGAGAATGTGAAGAAGGTAAAACAATTGTTAGATTTTCGTGAATTCCATGCGACAATTGGAATTAGAATTCTCATTGATAGGTCTCTCATATCAATTGATTCAAGATGGGGACAGGAAACCATCGAGATGCATGATCTGCTTGAAGAAATGGGAAGGGCAATTGTTCAGGAACAATGTATAGACGATCCCGGTAAGCGGAGTAGGTTGTTCAACGATGAGGATGTTTATCATGTATTGAAAAGTAACACGGAAACTTCAAATGTTGAAAAAGATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1298

Amino Acids

147.51

Weight (kDa)

6.3

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3384, 3609
Acc36I ACCTGC 2 cut(s) 1369, 2464
AccB7I CCANNNNNTGG 1 cut(s) 1667
AccI GTMKAC 1 cut(s) 2047
AccII CGCG 1 cut(s) 258
AccIII TCCGGA 2 cut(s) 1519, 3531
AciI CCGC 7 cut(s) 95, 836, 1426, 2359, 2648, 2869, 3811
AclI AACGTT 2 cut(s) 631, 2674
AclWI GGATC 4 cut(s) 556, 1226, 3124, 3794
AcoI YGGCCR 2 cut(s) 1417, 2578
AcsI RAATTY 9 cut(s) 291, 431, 1430, 1511, 2108, 2762, 2999, 3656, 3681
AcuI CTGAAG 6 cut(s) 423, 746, 2326, 2381, 2417, 2991
AcvI CACGTG 1 cut(s) 2706
AdeI CACNNNGTG 2 cut(s) 1096, 2532
AfaI GTAC 8 cut(s) 72, 580, 799, 1087, 2181, 2592, 2625, 3148
AfiI CCNNNNNNNGG 4 cut(s) 583, 1667, 3151, 3810
AflII CTTAAG 4 cut(s) 512, 869, 2078, 2252
AjiI CACGTC 1 cut(s) 566
AjnI CCWGG 3 cut(s) 282, 1414, 1997
AjuI GAANNNNNNNTTGG 4 cut(s) 911, 943, 3189, 3221
Alw21I GWGCWC 2 cut(s) 2105, 2705
Alw44I GTGCAC 1 cut(s) 2701
AlwI GGATC 4 cut(s) 556, 1226, 3124, 3794
Ama87I CYCGRG 1 cut(s) 1772
Aor13HI TCCGGA 2 cut(s) 1519, 3531
AoxI GGCC 6 cut(s) 25, 280, 1417, 2578, 2811, 2848
ApaI GGGCCC 1 cut(s) 2852
ApaLI GTGCAC 1 cut(s) 2701
ApeKI GCWGC 8 cut(s) 161, 300, 1100, 1965, 2031, 2241, 2714, 2729
ApoI RAATTY 9 cut(s) 291, 431, 1430, 1511, 2108, 2762, 2999, 3656, 3681
ArsI GACNNNNNNTTYG 2 cut(s) 2345, 2377
Asp700I GAANNNNTTC 1 cut(s) 960
AsuC2I CCSGG 4 cut(s) 804, 2123, 2852, 3804
AsuHPI GGTGA 1 cut(s) 2360
AsuII TTCGAA 1 cut(s) 3003
AvaI CYCGRG 1 cut(s) 1772
AvaII GGWCC 7 cut(s) 243, 586, 882, 1639, 2453, 3154, 3450
BaeGI GKGCMC 4 cut(s) 1674, 2705, 2852, 3269
BaeI ACNNNNGTAYC 4 cut(s) 45, 78, 103, 136
BalI TGGCCA 2 cut(s) 1419, 2580
BanII GRGCYC 2 cut(s) 573, 2852
BarI GAAGNNNNNNTAC 2 cut(s) 2172, 2204
BbrPI CACGTG 1 cut(s) 2706
BbsI GAAGAC 5 cut(s) 641, 918, 2514, 3209, 3486
Bbv12I GWGCWC 2 cut(s) 2105, 2705
BbvI GCAGC 8 cut(s) 173, 312, 1112, 1952, 2043, 2228, 2701, 2741
BceAI ACGGC 3 cut(s) 392, 561, 3129
BcgI CGANNNNNNTGC 2 cut(s) 1753, 1787
BciT130I CCWGG 3 cut(s) 284, 1416, 1999
BciVI GTATCC 1 cut(s) 199
BcnI CCSGG 4 cut(s) 804, 2123, 2852, 3804
BfaI CTAG 7 cut(s) 488, 1445, 1529, 1958, 2465, 3056, 3135
BfmI CTRYAG 3 cut(s) 357, 1167, 1362
BfrI CTTAAG 4 cut(s) 512, 869, 2078, 2252
BfuAI ACCTGC 2 cut(s) 1369, 2464
BfuI GTATCC 1 cut(s) 199
BglII AGATCT 3 cut(s) 723, 2127, 2779
BlpI GCTNAGC 2 cut(s) 572, 3140
BmcAI AGTACT 1 cut(s) 799
Bme1390I CCNGG 7 cut(s) 284, 804, 1416, 1999, 2123, 2852, 3804
Bme18I GGWCC 7 cut(s) 243, 586, 882, 1639, 2453, 3154, 3450
BmeT110I CYCGRG 1 cut(s) 1772
BmgBI CACGTC 1 cut(s) 566
BmiI GGNNCC 5 cut(s) 883, 1641, 2136, 2850, 3451
BmrFI CCNGG 7 cut(s) 284, 804, 1416, 1999, 2123, 2852, 3804
BmrI ACTGGG 1 cut(s) 260
BmsI GCATC 8 cut(s) 312, 427, 1779, 2641, 2928, 3319, 3396, 3732
BmuI ACTGGG 1 cut(s) 260
BpiI GAAGAC 5 cut(s) 641, 918, 2514, 3209, 3486
BpmI CTGGAG 1 cut(s) 1711
Bpu1102I GCTNAGC 2 cut(s) 572, 3140
Bpu14I TTCGAA 1 cut(s) 3003
BpuEI CTTGAG 1 cut(s) 1925
BpuMI CCSGG 4 cut(s) 804, 2123, 2852, 3804
Bsa29I ATCGAT 3 cut(s) 991, 1608, 2691
BsaAI YACGTR 1 cut(s) 2706
BsaBI GATNNNNATC 2 cut(s) 1410, 3840
BsaI GGTCTC 3 cut(s) 69, 1338, 3702
BsaJI CCNNGG 2 cut(s) 1997, 1998
BsaWI WCCGGW 3 cut(s) 1519, 3322, 3531
Bsc4I CCNNNNNNNGG 4 cut(s) 583, 1667, 3151, 3810
Bse1I ACTGG 9 cut(s) 28, 255, 667, 920, 1481, 1497, 1694, 2594, 3235
Bse3DI GCAATG 2 cut(s) 351, 1891
Bse8I GATNNNNATC 2 cut(s) 1410, 3840
BseAI TCCGGA 2 cut(s) 1519, 3531
BseBI CCWGG 3 cut(s) 284, 1416, 1999
BseCI ATCGAT 3 cut(s) 991, 1608, 2691
BseDI CCNNGG 2 cut(s) 1997, 1998
BseJI GATNNNNATC 2 cut(s) 1410, 3840
BseLI CCNNNNNNNGG 4 cut(s) 583, 1667, 3151, 3810
BseMI GCAATG 2 cut(s) 351, 1891
BseMII CTCAG 5 cut(s) 586, 1349, 1980, 3094, 3564
BseNI ACTGG 9 cut(s) 28, 255, 667, 920, 1481, 1497, 1694, 2594, 3235
BseRI GAGGAG 1 cut(s) 2454
BseSI GKGCMC 4 cut(s) 1674, 2705, 2852, 3269
BseXI GCAGC 8 cut(s) 173, 312, 1112, 1952, 2043, 2228, 2701, 2741
BsgI GTGCAG 2 cut(s) 1747, 1951
Bsh1236I CGCG 1 cut(s) 258
BshFI GGCC 6 cut(s) 27, 282, 1419, 2580, 2813, 2850
BshVI ATCGAT 3 cut(s) 991, 1608, 2691
BsiHKAI GWGCWC 2 cut(s) 2105, 2705
BsiHKCI CYCGRG 1 cut(s) 1772
BsiSI CCGG 8 cut(s) 803, 1520, 2123, 2852, 3323, 3417, 3532, 3804
BslFI GGGAC 6 cut(s) 933, 1170, 1625, 2185, 2246, 3738
BslI CCNNNNNNNGG 4 cut(s) 583, 1667, 3151, 3810
BsmFI GGGAC 6 cut(s) 933, 1170, 1625, 2185, 2246, 3738
BsmI GAATGC 6 cut(s) 11, 163, 2731, 2871, 2898, 3423
BsnI GGCC 6 cut(s) 27, 282, 1419, 2580, 2813, 2850
Bso31I GGTCTC 3 cut(s) 69, 1338, 3702
BsoBI CYCGRG 1 cut(s) 1772
Bsp119I TTCGAA 1 cut(s) 3003
Bsp120I GGGCCC 1 cut(s) 2848
Bsp1286I GDGCHC 6 cut(s) 573, 1674, 2105, 2705, 2852, 3269
Bsp13I TCCGGA 2 cut(s) 1519, 3531
Bsp1407I TGTACA 1 cut(s) 2179
Bsp1720I GCTNAGC 2 cut(s) 572, 3140
Bsp68I TCGCGA 1 cut(s) 258
BspACI CCGC 7 cut(s) 95, 836, 1426, 2359, 2648, 2869, 3811
BspANI GGCC 6 cut(s) 27, 282, 1419, 2580, 2813, 2850
BspCNI CTCAG 5 cut(s) 585, 1348, 1981, 3093, 3565
BspDI ATCGAT 3 cut(s) 991, 1608, 2691
BspEI TCCGGA 2 cut(s) 1519, 3531
BspFNI CGCG 1 cut(s) 258
BspLI GGNNCC 5 cut(s) 883, 1641, 2136, 2850, 3451
BspMAI CTGCAG 1 cut(s) 1366
BspMI ACCTGC 2 cut(s) 1369, 2464
BspPI GGATC 4 cut(s) 556, 1226, 3124, 3794
BspQI GCTCTTC 5 cut(s) 312, 765, 1338, 2880, 3347
BspT104I TTCGAA 1 cut(s) 3003
BspTI CTTAAG 4 cut(s) 512, 869, 2078, 2252
BspTNI GGTCTC 3 cut(s) 69, 1338, 3702
BsrDI GCAATG 2 cut(s) 351, 1891
BsrGI TGTACA 1 cut(s) 2179
BsrI ACTGG 9 cut(s) 28, 255, 667, 920, 1481, 1497, 1694, 2594, 3235
BssECI CCNNGG 2 cut(s) 1997, 1998
Bst2UI CCWGG 3 cut(s) 284, 1416, 1999
Bst4CI ACNGT 3 cut(s) 347, 709, 797
Bst6I CTCTTC 9 cut(s) 312, 430, 765, 1338, 1467, 2313, 2880, 2998, 3347
BstAFI CTTAAG 4 cut(s) 512, 869, 2078, 2252
BstAPI GCANNNNNTGC 1 cut(s) 3751
BstAUI TGTACA 1 cut(s) 2179
BstBAI YACGTR 1 cut(s) 2706
BstBI TTCGAA 1 cut(s) 3003
BstC8I GCNNGC 6 cut(s) 640, 780, 2246, 2866, 2917, 3354
BstFNI CGCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 6 cut(s) 104, 833, 1425, 1543, 3401, 3751
BstNI CCWGG 3 cut(s) 284, 1416, 1999
BstNSI RCATGY 3 cut(s) 1035, 3356, 3603
BstSCI CCNGG 7 cut(s) 282, 802, 1414, 1997, 2121, 2850, 3802
BstSFI CTRYAG 3 cut(s) 357, 1167, 1362
BstSLI GKGCMC 4 cut(s) 1674, 2705, 2852, 3269
BstUI CGCG 1 cut(s) 258
BstV1I GCAGC 8 cut(s) 173, 312, 1112, 1952, 2043, 2228, 2701, 2741
BstV2I GAAGAC 5 cut(s) 641, 918, 2514, 3209, 3486
BstX2I RGATCY 4 cut(s) 723, 1231, 2127, 2779
BstXI CCANNNNNNTGG 1 cut(s) 2491
BstYI RGATCY 4 cut(s) 723, 1231, 2127, 2779
Bsu15I ATCGAT 3 cut(s) 991, 1608, 2691
BsuI GTATCC 1 cut(s) 199
BsuRI GGCC 6 cut(s) 27, 282, 1419, 2580, 2813, 2850
BsuTUI ATCGAT 3 cut(s) 991, 1608, 2691
BtgZI GCGATG 1 cut(s) 3419
BtrI CACGTC 1 cut(s) 566
BtsI GCAGTG 1 cut(s) 1759
BtsIMutI CAGTG 5 cut(s) 660, 1343, 1474, 1759, 3228
BtuMI TCGCGA 1 cut(s) 258
BveI ACCTGC 2 cut(s) 1369, 2464
Cac8I GCNNGC 6 cut(s) 640, 780, 2246, 2866, 2917, 3354
ClaI ATCGAT 3 cut(s) 991, 1608, 2691
CseI GACGC 2 cut(s) 2508, 2921
Csp6I GTAC 8 cut(s) 71, 579, 798, 1086, 2180, 2591, 2624, 3147
CviQI GTAC 8 cut(s) 71, 579, 798, 1086, 2180, 2591, 2624, 3147
DraIII CACNNNGTG 2 cut(s) 1096, 2532
EaeI YGGCCR 2 cut(s) 1417, 2578
Eam1104I CTCTTC 9 cut(s) 312, 430, 765, 1338, 1467, 2313, 2880, 2998, 3347
EarI CTCTTC 9 cut(s) 312, 430, 765, 1338, 1467, 2313, 2880, 2998, 3347
Eco24I GRGCYC 2 cut(s) 573, 2852
Eco31I GGTCTC 3 cut(s) 69, 1338, 3702
Eco32I GATATC 1 cut(s) 1487
Eco47I GGWCC 7 cut(s) 243, 586, 882, 1639, 2453, 3154, 3450
Eco57I CTGAAG 6 cut(s) 423, 746, 2326, 2381, 2417, 2991
Eco72I CACGTG 1 cut(s) 2706
Eco88I CYCGRG 1 cut(s) 1772
EcoO109I RGGNCCY 7 cut(s) 280, 586, 882, 1639, 2848, 3154, 3450
EcoRI GAATTC 3 cut(s) 291, 3656, 3681
EcoRII CCWGG 3 cut(s) 282, 1414, 1997
EcoRV GATATC 1 cut(s) 1487
EcoT22I ATGCAT 3 cut(s) 2656, 3411, 3747
EcoT38I GRGCYC 2 cut(s) 573, 2852
FaqI GGGAC 6 cut(s) 933, 1170, 1625, 2185, 2246, 3738
FauI CCCGC 2 cut(s) 1433, 2366
FauNDI CATATG 1 cut(s) 1542
FblI GTMKAC 1 cut(s) 2047
FriOI GRGCYC 2 cut(s) 573, 2852
FspBI CTAG 7 cut(s) 488, 1445, 1529, 1958, 2465, 3056, 3135
GsuI CTGGAG 1 cut(s) 1711
HaeIII GGCC 6 cut(s) 27, 282, 1419, 2580, 2813, 2850
HapII CCGG 8 cut(s) 803, 1520, 2123, 2852, 3323, 3417, 3532, 3804
HgaI GACGC 2 cut(s) 2508, 2921
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HindIII AAGCTT 4 cut(s) 872, 1565, 1736, 2186
HpaII CCGG 8 cut(s) 803, 1520, 2123, 2852, 3323, 3417, 3532, 3804
HphI GGTGA 1 cut(s) 2360
Hpy166II GTNNAC 8 cut(s) 133, 1088, 1241, 1594, 1705, 1931, 2048, 2703
Hpy8I GTNNAC 8 cut(s) 133, 1088, 1241, 1594, 1705, 1931, 2048, 2703
Hpy99I CGWCG 2 cut(s) 567, 3339
HpyCH4III ACNGT 3 cut(s) 347, 709, 797
HpyCH4IV ACGT 5 cut(s) 565, 631, 1243, 2674, 2705
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 833, 1425, 1543, 3401, 3751
HpySE526I ACGT 5 cut(s) 565, 631, 1243, 2674, 2705
Kpn2I TCCGGA 2 cut(s) 1519, 3531
LguI GCTCTTC 5 cut(s) 312, 765, 1338, 2880, 3347
LmnI GCTCC 1 cut(s) 2134
Lsp1109I GCAGC 8 cut(s) 173, 312, 1112, 1952, 2043, 2228, 2701, 2741
LweI GCATC 8 cut(s) 312, 427, 1779, 2641, 2928, 3319, 3396, 3732
MaeI CTAG 7 cut(s) 488, 1445, 1529, 1958, 2465, 3056, 3135
MaeII ACGT 5 cut(s) 565, 631, 1243, 2674, 2705
MaeIII GTNAC 3 cut(s) 460, 1289, 3857
MfeI CAATTG 5 cut(s) 1206, 3638, 3669, 3708, 3774
MflI RGATCY 4 cut(s) 723, 1231, 2127, 2779
MhlI GDGCHC 6 cut(s) 573, 1674, 2105, 2705, 2852, 3269
MlsI TGGCCA 2 cut(s) 1419, 2580
MluNI TGGCCA 2 cut(s) 1419, 2580
MlyI GAGTC 4 cut(s) 1294, 1613, 1666, 2053
MmeI TCCRAC 2 cut(s) 268, 2836
Mox20I TGGCCA 2 cut(s) 1419, 2580
Mph1103I ATGCAT 3 cut(s) 2656, 3411, 3747
MroI TCCGGA 2 cut(s) 1519, 3531
MroXI GAANNNNTTC 1 cut(s) 960
MscI TGGCCA 2 cut(s) 1419, 2580
MslI CAYNNNNRTG 4 cut(s) 57, 1124, 2382, 3740
Msp20I TGGCCA 2 cut(s) 1419, 2580
MspA1I CMGCKG 1 cut(s) 2177
MspCI CTTAAG 4 cut(s) 512, 869, 2078, 2252
MspI CCGG 8 cut(s) 803, 1520, 2123, 2852, 3323, 3417, 3532, 3804
MspR9I CCNGG 7 cut(s) 284, 804, 1416, 1999, 2123, 2852, 3804
MunI CAATTG 5 cut(s) 1206, 3638, 3669, 3708, 3774
Mva1269I GAATGC 6 cut(s) 11, 163, 2731, 2871, 2898, 3423
MvaI CCWGG 3 cut(s) 284, 1416, 1999
MvnI CGCG 1 cut(s) 258
MwoI GCNNNNNNNGC 6 cut(s) 104, 833, 1425, 1543, 3401, 3751
NciI CCSGG 4 cut(s) 804, 2123, 2852, 3804
NdeI CATATG 1 cut(s) 1542
NlaIV GGNNCC 5 cut(s) 883, 1641, 2136, 2850, 3451
NruI TCGCGA 1 cut(s) 258
NsiI ATGCAT 3 cut(s) 2656, 3411, 3747
NspI RCATGY 3 cut(s) 1035, 3356, 3603
NspV TTCGAA 1 cut(s) 3003
PacI TTAATTAA 1 cut(s) 219
PaeI GCATGC 1 cut(s) 3356
PaeR7I CTCGAG 1 cut(s) 1772
PasI CCCWGGG 1 cut(s) 1998
PciSI GCTCTTC 5 cut(s) 312, 765, 1338, 2880, 3347
PcsI WCGNNNNNNNCGW 1 cut(s) 852
PctI GAATGC 6 cut(s) 11, 163, 2731, 2871, 2898, 3423
PdmI GAANNNNTTC 1 cut(s) 960
PflMI CCANNNNNTGG 1 cut(s) 1667
PfoI TCCNGGA 2 cut(s) 802, 2121
PleI GAGTC 4 cut(s) 1294, 1613, 1665, 2052
PmaCI CACGTG 1 cut(s) 2706
PmlI CACGTG 1 cut(s) 2706
PpsI GAGTC 4 cut(s) 1294, 1613, 1665, 2052
Ppu21I YACGTR 1 cut(s) 2706
PpuMI RGGWCCY 5 cut(s) 586, 882, 1639, 3154, 3450
PsiI TTATAA 2 cut(s) 3384, 3609
Psp1406I AACGTT 2 cut(s) 631, 2674
Psp5II RGGWCCY 5 cut(s) 586, 882, 1639, 3154, 3450
Psp6I CCWGG 3 cut(s) 282, 1414, 1997
PspCI CACGTG 1 cut(s) 2706
PspGI CCWGG 3 cut(s) 282, 1414, 1997
PspN4I GGNNCC 5 cut(s) 883, 1641, 2136, 2850, 3451
PspOMI GGGCCC 1 cut(s) 2848
PspPPI RGGWCCY 5 cut(s) 586, 882, 1639, 3154, 3450
PstI CTGCAG 1 cut(s) 1366
PsuI RGATCY 4 cut(s) 723, 1231, 2127, 2779
PvuII CAGCTG 1 cut(s) 2177
RruI TCGCGA 1 cut(s) 258
RsaI GTAC 8 cut(s) 72, 580, 799, 1087, 2181, 2592, 2625, 3148
RsaNI GTAC 8 cut(s) 71, 579, 798, 1086, 2180, 2591, 2624, 3147
RseI CAYNNNNRTG 4 cut(s) 57, 1124, 2382, 3740
SapI GCTCTTC 5 cut(s) 312, 765, 1338, 2880, 3347
ScaI AGTACT 1 cut(s) 799
SchI GAGTC 4 cut(s) 1294, 1613, 1666, 2053
ScrFI CCNGG 7 cut(s) 284, 804, 1416, 1999, 2123, 2852, 3804
SduI GDGCHC 6 cut(s) 573, 1674, 2105, 2705, 2852, 3269
SfaNI GCATC 8 cut(s) 312, 427, 1779, 2641, 2928, 3319, 3396, 3732
SfcI CTRYAG 3 cut(s) 357, 1167, 1362
Sfr274I CTCGAG 1 cut(s) 1772
SfuI TTCGAA 1 cut(s) 3003
SinI GGWCC 7 cut(s) 243, 586, 882, 1639, 2453, 3154, 3450
SlaI CTCGAG 1 cut(s) 1772
SmiMI CAYNNNNRTG 4 cut(s) 57, 1124, 2382, 3740
SmlI CTYRAG 6 cut(s) 512, 869, 1772, 1904, 2078, 2252
SmoI CTYRAG 6 cut(s) 512, 869, 1772, 1904, 2078, 2252
SphI GCATGC 1 cut(s) 3356
SsiI CCGC 7 cut(s) 95, 836, 1426, 2359, 2648, 2869, 3811
SspI AATATT 1 cut(s) 1870
SspMI CTAG 7 cut(s) 488, 1445, 1529, 1958, 2465, 3056, 3135
StyD4I CCNGG 7 cut(s) 282, 802, 1414, 1997, 2121, 2850, 3802
TaaI ACNGT 3 cut(s) 347, 709, 797
TaiI ACGT 5 cut(s) 568, 634, 1246, 2677, 2708
TatI WGTACW 2 cut(s) 797, 2179
TauI GCSGC 2 cut(s) 98, 2871
TscAI CASTG 5 cut(s) 667, 1343, 1481, 1766, 3235
TseI GCWGC 8 cut(s) 161, 300, 1100, 1965, 2031, 2241, 2714, 2729
TspGWI ACGGA 3 cut(s) 1073, 2652, 3878
TspRI CASTG 5 cut(s) 667, 1343, 1481, 1766, 3235
Van91I CCANNNNNTGG 1 cut(s) 1667
Vha464I CTTAAG 4 cut(s) 512, 869, 2078, 2252
VneI GTGCAC 1 cut(s) 2701
VpaK11BI GGWCC 7 cut(s) 243, 586, 882, 1639, 2453, 3154, 3450
XapI RAATTY 9 cut(s) 291, 431, 1430, 1511, 2108, 2762, 2999, 3656, 3681
XbaI TCTAGA 3 cut(s) 1444, 1957, 2464
XceI RCATGY 3 cut(s) 1035, 3356, 3603
XcmI CCANNNNNNNNNTGG 3 cut(s) 2058, 2533, 3668
XhoI CTCGAG 1 cut(s) 1772
XmiI GTMKAC 1 cut(s) 2047
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 7 cut(s) 488, 1445, 1529, 1958, 2465, 3056, 3135
ZrmI AGTACT 1 cut(s) 799
Zsp2I ATGCAT 3 cut(s) 2656, 3411, 3747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.