Disease resistance protein (TIR-NBS-LRR class)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1736 |
| Acc65I | GGTACC | 1 cut(s) | 776 |
| AccB1I | GGYRCC | 2 cut(s) | 424, 776 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1522 |
| AccII | CGCG | 2 cut(s) | 1082, 1542 |
| AccIII | TCCGGA | 1 cut(s) | 1435 |
| AciI | CCGC | 7 cut(s) | 183, 598, 901, 1082, 1149, 1492, 1540 |
| AclI | AACGTT | 1 cut(s) | 1676 |
| AclWI | GGATC | 4 cut(s) | 332, 1507, 1676, 1931 |
| AcsI | RAATTY | 5 cut(s) | 609, 1153, 1212, 1274, 1452 |
| AcuI | CTGAAG | 2 cut(s) | 1097, 1286 |
| AdeI | CACNNNGTG | 1 cut(s) | 258 |
| AfaI | GTAC | 6 cut(s) | 50, 351, 778, 907, 1147, 1313 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1442, 1522 |
| AflIII | ACRYGT | 1 cut(s) | 346 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 244 |
| AjiI | CACGTC | 1 cut(s) | 934 |
| AjnI | CCWGG | 3 cut(s) | 985, 1865, 1947 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 599, 631, 773, 805, 963, 995 |
| AleI | CACNNNNGTG | 1 cut(s) | 1587 |
| Alw26I | GTCTC | 4 cut(s) | 368, 1473, 1708, 1876 |
| AlwI | GGATC | 4 cut(s) | 332, 1507, 1676, 1931 |
| Ama87I | CYCGRG | 1 cut(s) | 1011 |
| Aor13HI | TCCGGA | 1 cut(s) | 1435 |
| AoxI | GGCC | 2 cut(s) | 982, 1897 |
| ApeKI | GCWGC | 4 cut(s) | 113, 455, 1187, 1418 |
| ApoI | RAATTY | 5 cut(s) | 609, 1153, 1212, 1274, 1452 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 642, 1110, 1767 |
| Asp718I | GGTACC | 1 cut(s) | 776 |
| AspLEI | GCGC | 1 cut(s) | 1572 |
| AspS9I | GGNCC | 3 cut(s) | 179, 983, 1945 |
| AsuC2I | CCSGG | 1 cut(s) | 1563 |
| AsuHPI | GGTGA | 1 cut(s) | 1601 |
| AsuII | TTCGAA | 2 cut(s) | 735, 1812 |
| AvaI | CYCGRG | 1 cut(s) | 1011 |
| AvaII | GGWCC | 2 cut(s) | 179, 1945 |
| BaeGI | GKGCMC | 1 cut(s) | 429 |
| BanI | GGYRCC | 2 cut(s) | 424, 776 |
| BbsI | GAAGAC | 1 cut(s) | 240 |
| BbvI | GCAGC | 4 cut(s) | 100, 467, 1174, 1405 |
| BccI | CCATC | 6 cut(s) | 111, 349, 355, 1322, 1436, 1831 |
| BceAI | ACGGC | 1 cut(s) | 888 |
| BciT130I | CCWGG | 3 cut(s) | 987, 1867, 1949 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BclI | TGATCA | 1 cut(s) | 222 |
| BcnI | CCSGG | 1 cut(s) | 1563 |
| BcoDI | GTCTC | 4 cut(s) | 368, 1473, 1708, 1876 |
| BfaI | CTAG | 5 cut(s) | 99, 464, 839, 1040, 1055 |
| BfmI | CTRYAG | 3 cut(s) | 873, 966, 1188 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BglII | AGATCT | 2 cut(s) | 1074, 1963 |
| BisI | GCNGC | 5 cut(s) | 114, 456, 598, 1188, 1419 |
| BlsI | GCNGC | 5 cut(s) | 115, 457, 599, 1189, 1420 |
| Bme1390I | CCNGG | 4 cut(s) | 987, 1563, 1867, 1949 |
| Bme18I | GGWCC | 2 cut(s) | 179, 1945 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 244 |
| BmeT110I | CYCGRG | 1 cut(s) | 1011 |
| BmgBI | CACGTC | 1 cut(s) | 934 |
| BmgT120I | GGNCC | 3 cut(s) | 179, 983, 1945 |
| BmiI | GGNNCC | 4 cut(s) | 181, 426, 778, 899 |
| BmrFI | CCNGG | 4 cut(s) | 987, 1563, 1867, 1949 |
| BmsI | GCATC | 5 cut(s) | 694, 1226, 1390, 1491, 1765 |
| BpiI | GAAGAC | 1 cut(s) | 240 |
| BpmI | CTGGAG | 1 cut(s) | 1888 |
| Bpu14I | TTCGAA | 2 cut(s) | 735, 1812 |
| BpuEI | CTTGAG | 4 cut(s) | 179, 1671, 1732, 1862 |
| BpuMI | CCSGG | 1 cut(s) | 1563 |
| BsaJI | CCNNGG | 3 cut(s) | 985, 1865, 1941 |
| BsaWI | WCCGGW | 1 cut(s) | 1435 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 159, 189 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1442, 1522 |
| Bse1I | ACTGG | 4 cut(s) | 288, 580, 949, 1025 |
| BseAI | TCCGGA | 1 cut(s) | 1435 |
| BseBI | CCWGG | 3 cut(s) | 987, 1867, 1949 |
| BseDI | CCNNGG | 3 cut(s) | 985, 1865, 1941 |
| BseGI | GGATG | 5 cut(s) | 271, 630, 1444, 1506, 1600 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1442, 1522 |
| BseMII | CTCAG | 2 cut(s) | 76, 1899 |
| BseNI | ACTGG | 4 cut(s) | 288, 580, 949, 1025 |
| BseRI | GAGGAG | 1 cut(s) | 180 |
| BseSI | GKGCMC | 1 cut(s) | 429 |
| BseXI | GCAGC | 4 cut(s) | 100, 467, 1174, 1405 |
| BseYI | CCCAGC | 1 cut(s) | 467 |
| Bsh1236I | CGCG | 2 cut(s) | 1082, 1542 |
| BshFI | GGCC | 2 cut(s) | 984, 1899 |
| BshNI | GGYRCC | 2 cut(s) | 424, 776 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1011 |
| BsiSI | CCGG | 2 cut(s) | 1436, 1562 |
| BslFI | GGGAC | 4 cut(s) | 732, 857, 959, 1400 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1442, 1522 |
| BsmAI | GTCTC | 4 cut(s) | 368, 1473, 1708, 1876 |
| BsmBI | CGTCTC | 1 cut(s) | 1473 |
| BsmFI | GGGAC | 4 cut(s) | 732, 857, 959, 1400 |
| BsmI | GAATGC | 4 cut(s) | 293, 1194, 1219, 1707 |
| BsnI | GGCC | 2 cut(s) | 984, 1899 |
| BsoBI | CYCGRG | 1 cut(s) | 1011 |
| Bsp119I | TTCGAA | 2 cut(s) | 735, 1812 |
| Bsp1286I | GDGCHC | 1 cut(s) | 429 |
| Bsp13I | TCCGGA | 1 cut(s) | 1435 |
| Bsp1407I | TGTACA | 1 cut(s) | 1311 |
| Bsp143I | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| Bsp19I | CCATGG | 1 cut(s) | 1941 |
| BspACI | CCGC | 7 cut(s) | 183, 598, 901, 1082, 1149, 1492, 1540 |
| BspANI | GGCC | 2 cut(s) | 984, 1899 |
| BspCNI | CTCAG | 2 cut(s) | 75, 1900 |
| BspEI | TCCGGA | 1 cut(s) | 1435 |
| BspFNI | CGCG | 2 cut(s) | 1082, 1542 |
| BspLI | GGNNCC | 4 cut(s) | 181, 426, 778, 899 |
| BspMAI | CTGCAG | 1 cut(s) | 1192 |
| BspPI | GGATC | 4 cut(s) | 332, 1507, 1676, 1931 |
| BspQI | GCTCTTC | 1 cut(s) | 1124 |
| BspT104I | TTCGAA | 2 cut(s) | 735, 1812 |
| BspT107I | GGYRCC | 2 cut(s) | 424, 776 |
| BsrGI | TGTACA | 1 cut(s) | 1311 |
| BsrI | ACTGG | 4 cut(s) | 288, 580, 949, 1025 |
| BssECI | CCNNGG | 3 cut(s) | 985, 1865, 1941 |
| BssMI | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| BssT1I | CCWWGG | 1 cut(s) | 1941 |
| Bst2UI | CCWGG | 3 cut(s) | 987, 1867, 1949 |
| Bst4CI | ACNGT | 3 cut(s) | 493, 746, 804 |
| Bst6I | CTCTTC | 5 cut(s) | 16, 35, 799, 1116, 1124 |
| BstAUI | TGTACA | 1 cut(s) | 1311 |
| BstBI | TTCGAA | 2 cut(s) | 735, 1812 |
| BstC8I | GCNNGC | 2 cut(s) | 699, 1192 |
| BstDEI | CTNAG | 3 cut(s) | 62, 1908, 1931 |
| BstDSI | CCRYGG | 1 cut(s) | 1941 |
| BstF5I | GGATG | 5 cut(s) | 271, 630, 1444, 1506, 1600 |
| BstFNI | CGCG | 2 cut(s) | 1082, 1542 |
| BstHHI | GCGC | 1 cut(s) | 1572 |
| BstKTI | GATC | 9 cut(s) | 225, 340, 773, 1077, 1183, 1515, 1684, 1926, 1966 |
| BstMAI | GTCTC | 4 cut(s) | 368, 1473, 1708, 1876 |
| BstMBI | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 464, 1567, 1650, 1861 |
| BstNI | CCWGG | 3 cut(s) | 987, 1867, 1949 |
| BstNSI | RCATGY | 2 cut(s) | 350, 1374 |
| BstSCI | CCNGG | 4 cut(s) | 985, 1561, 1865, 1947 |
| BstSFI | CTRYAG | 3 cut(s) | 873, 966, 1188 |
| BstSLI | GKGCMC | 1 cut(s) | 429 |
| BstUI | CGCG | 2 cut(s) | 1082, 1542 |
| BstV1I | GCAGC | 4 cut(s) | 100, 467, 1174, 1405 |
| BstV2I | GAAGAC | 1 cut(s) | 240 |
| BstX2I | RGATCY | 4 cut(s) | 337, 1074, 1681, 1963 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1948 |
| BstYI | RGATCY | 4 cut(s) | 337, 1074, 1681, 1963 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| BsuRI | GGCC | 2 cut(s) | 984, 1899 |
| BtgI | CCRYGG | 1 cut(s) | 1941 |
| BtrI | CACGTC | 1 cut(s) | 934 |
| BtsCI | GGATG | 5 cut(s) | 271, 630, 1444, 1506, 1600 |
| BtsIMutI | CAGTG | 1 cut(s) | 742 |
| Cac8I | GCNNGC | 2 cut(s) | 699, 1192 |
| CfoI | GCGC | 1 cut(s) | 1572 |
| Cfr13I | GGNCC | 3 cut(s) | 179, 983, 1945 |
| CseI | GACGC | 1 cut(s) | 234 |
| CsiI | ACCWGGT | 1 cut(s) | 1947 |
| Csp6I | GTAC | 6 cut(s) | 49, 350, 777, 906, 1146, 1312 |
| CviQI | GTAC | 6 cut(s) | 49, 350, 777, 906, 1146, 1312 |
| DdeI | CTNAG | 3 cut(s) | 62, 1908, 1931 |
| DpnI | GATC | 9 cut(s) | 224, 339, 772, 1076, 1182, 1514, 1683, 1925, 1965 |
| DpnII | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| DraI | TTTAAA | 2 cut(s) | 1167, 1279 |
| DraIII | CACNNNGTG | 1 cut(s) | 258 |
| DriI | GACNNNNNGTC | 1 cut(s) | 244 |
| Eam1104I | CTCTTC | 5 cut(s) | 16, 35, 799, 1116, 1124 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 244 |
| EarI | CTCTTC | 5 cut(s) | 16, 35, 799, 1116, 1124 |
| EciI | GGCGGA | 1 cut(s) | 890 |
| Eco130I | CCWWGG | 1 cut(s) | 1941 |
| Eco47I | GGWCC | 2 cut(s) | 179, 1945 |
| Eco57I | CTGAAG | 2 cut(s) | 1097, 1286 |
| Eco88I | CYCGRG | 1 cut(s) | 1011 |
| EcoRII | CCWGG | 3 cut(s) | 985, 1865, 1947 |
| EcoT14I | CCWWGG | 1 cut(s) | 1941 |
| EcoT22I | ATGCAT | 2 cut(s) | 1506, 1707 |
| ErhI | CCWWGG | 1 cut(s) | 1941 |
| Esp3I | CGTCTC | 1 cut(s) | 1473 |
| FaqI | GGGAC | 4 cut(s) | 732, 857, 959, 1400 |
| FauI | CCCGC | 1 cut(s) | 190 |
| FauNDI | CATATG | 2 cut(s) | 1496, 1860 |
| FbaI | TGATCA | 1 cut(s) | 222 |
| Fnu4HI | GCNGC | 5 cut(s) | 114, 456, 598, 1188, 1419 |
| FokI | GGATG | 5 cut(s) | 278, 617, 1451, 1513, 1607 |
| Fsp4HI | GCNGC | 5 cut(s) | 114, 456, 598, 1188, 1419 |
| FspBI | CTAG | 5 cut(s) | 99, 464, 839, 1040, 1055 |
| GlaI | GCGC | 1 cut(s) | 1571 |
| GluI | GCNGC | 5 cut(s) | 114, 456, 598, 1188, 1419 |
| GsaI | CCCAGC | 1 cut(s) | 471 |
| GsuI | CTGGAG | 1 cut(s) | 1888 |
| HaeIII | GGCC | 2 cut(s) | 984, 1899 |
| HapII | CCGG | 2 cut(s) | 1436, 1562 |
| HgaI | GACGC | 1 cut(s) | 234 |
| HhaI | GCGC | 1 cut(s) | 1572 |
| Hin6I | GCGC | 1 cut(s) | 1570 |
| HinP1I | GCGC | 1 cut(s) | 1570 |
| HindIII | AAGCTT | 2 cut(s) | 441, 1689 |
| HpaII | CCGG | 2 cut(s) | 1436, 1562 |
| HphI | GGTGA | 1 cut(s) | 1601 |
| Hpy166II | GTNNAC | 3 cut(s) | 886, 1312, 1981 |
| Hpy188I | TCNGA | 5 cut(s) | 71, 530, 799, 1159, 1305 |
| Hpy188III | TCNNGA | 9 cut(s) | 554, 926, 1013, 1436, 1742, 1760, 1772, 1879, 1907 |
| Hpy8I | GTNNAC | 3 cut(s) | 886, 1312, 1981 |
| Hpy99I | CGWCG | 1 cut(s) | 935 |
| HpyAV | CCTTC | 7 cut(s) | 197, 430, 1042, 1165, 1377, 1608, 1790 |
| HpyCH4III | ACNGT | 3 cut(s) | 493, 746, 804 |
| HpyCH4IV | ACGT | 3 cut(s) | 933, 1466, 1676 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 464, 1567, 1650, 1861 |
| HpyF3I | CTNAG | 3 cut(s) | 62, 1908, 1931 |
| HpySE526I | ACGT | 3 cut(s) | 933, 1466, 1676 |
| HspAI | GCGC | 1 cut(s) | 1570 |
| Kpn2I | TCCGGA | 1 cut(s) | 1435 |
| KpnI | GGTACC | 1 cut(s) | 780 |
| Ksp22I | TGATCA | 1 cut(s) | 222 |
| Kzo9I | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| LguI | GCTCTTC | 1 cut(s) | 1124 |
| LmnI | GCTCC | 4 cut(s) | 785, 903, 1138, 1869 |
| Lsp1109I | GCAGC | 4 cut(s) | 100, 467, 1174, 1405 |
| LweI | GCATC | 5 cut(s) | 694, 1226, 1390, 1491, 1765 |
| MabI | ACCWGGT | 1 cut(s) | 1947 |
| MaeI | CTAG | 5 cut(s) | 99, 464, 839, 1040, 1055 |
| MaeII | ACGT | 3 cut(s) | 933, 1466, 1676 |
| MaeIII | GTNAC | 2 cut(s) | 1802, 1934 |
| MalI | GATC | 9 cut(s) | 224, 339, 772, 1076, 1182, 1514, 1683, 1925, 1965 |
| MboI | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| MflI | RGATCY | 4 cut(s) | 337, 1074, 1681, 1963 |
| MhlI | GDGCHC | 1 cut(s) | 429 |
| MlyI | GAGTC | 2 cut(s) | 714, 1710 |
| MmeI | TCCRAC | 1 cut(s) | 157 |
| Mph1103I | ATGCAT | 2 cut(s) | 1506, 1707 |
| MroI | TCCGGA | 1 cut(s) | 1435 |
| MroXI | GAANNNNTTC | 3 cut(s) | 642, 1110, 1767 |
| MslI | CAYNNNNRTG | 4 cut(s) | 108, 1499, 1587, 1700 |
| MspI | CCGG | 2 cut(s) | 1436, 1562 |
| MspR9I | CCNGG | 4 cut(s) | 987, 1563, 1867, 1949 |
| Mva1269I | GAATGC | 4 cut(s) | 293, 1194, 1219, 1707 |
| MvaI | CCWGG | 3 cut(s) | 987, 1867, 1949 |
| MvnI | CGCG | 2 cut(s) | 1082, 1542 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 464, 1567, 1650, 1861 |
| NciI | CCSGG | 1 cut(s) | 1563 |
| NcoI | CCATGG | 1 cut(s) | 1941 |
| NdeI | CATATG | 2 cut(s) | 1496, 1860 |
| NdeII | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| NlaIV | GGNNCC | 4 cut(s) | 181, 426, 778, 899 |
| NsiI | ATGCAT | 2 cut(s) | 1506, 1707 |
| NspI | RCATGY | 2 cut(s) | 350, 1374 |
| NspV | TTCGAA | 2 cut(s) | 735, 1812 |
| OliI | CACNNNNGTG | 1 cut(s) | 1587 |
| PaeR7I | CTCGAG | 1 cut(s) | 1011 |
| PciI | ACATGT | 1 cut(s) | 346 |
| PciSI | GCTCTTC | 1 cut(s) | 1124 |
| PctI | GAATGC | 4 cut(s) | 293, 1194, 1219, 1707 |
| PdmI | GAANNNNTTC | 3 cut(s) | 642, 1110, 1767 |
| PfeI | GAWTC | 9 cut(s) | 206, 476, 550, 557, 941, 1106, 1446, 1814, 1903 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1522 |
| PkrI | GCNGC | 5 cut(s) | 115, 457, 599, 1189, 1420 |
| PleI | GAGTC | 2 cut(s) | 714, 1710 |
| PpsI | GAGTC | 2 cut(s) | 714, 1710 |
| PscI | ACATGT | 1 cut(s) | 346 |
| PsiI | TTATAA | 1 cut(s) | 1736 |
| Psp1406I | AACGTT | 1 cut(s) | 1676 |
| Psp6I | CCWGG | 3 cut(s) | 985, 1865, 1947 |
| PspFI | CCCAGC | 1 cut(s) | 467 |
| PspGI | CCWGG | 3 cut(s) | 985, 1865, 1947 |
| PspN4I | GGNNCC | 4 cut(s) | 181, 426, 778, 899 |
| PspPI | GGNCC | 3 cut(s) | 179, 983, 1945 |
| PstI | CTGCAG | 1 cut(s) | 1192 |
| PsuI | RGATCY | 4 cut(s) | 337, 1074, 1681, 1963 |
| RsaI | GTAC | 6 cut(s) | 50, 351, 778, 907, 1147, 1313 |
| RsaNI | GTAC | 6 cut(s) | 49, 350, 777, 906, 1146, 1312 |
| RseI | CAYNNNNRTG | 4 cut(s) | 108, 1499, 1587, 1700 |
| SapI | GCTCTTC | 1 cut(s) | 1124 |
| SatI | GCNGC | 5 cut(s) | 114, 456, 598, 1188, 1419 |
| Sau3AI | GATC | 9 cut(s) | 222, 337, 770, 1074, 1180, 1512, 1681, 1923, 1963 |
| Sau96I | GGNCC | 3 cut(s) | 179, 983, 1945 |
| SchI | GAGTC | 2 cut(s) | 714, 1710 |
| ScrFI | CCNGG | 4 cut(s) | 987, 1563, 1867, 1949 |
| SduI | GDGCHC | 1 cut(s) | 429 |
| SexAI | ACCWGGT | 1 cut(s) | 1947 |
| SfaNI | GCATC | 5 cut(s) | 694, 1226, 1390, 1491, 1765 |
| SfcI | CTRYAG | 3 cut(s) | 873, 966, 1188 |
| Sfr274I | CTCGAG | 1 cut(s) | 1011 |
| SfuI | TTCGAA | 2 cut(s) | 735, 1812 |
| SinI | GGWCC | 2 cut(s) | 179, 1945 |
| SlaI | CTCGAG | 1 cut(s) | 1011 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 108, 1499, 1587, 1700 |
| SmlI | CTYRAG | 5 cut(s) | 158, 1011, 1686, 1711, 1877 |
| SmoI | CTYRAG | 5 cut(s) | 158, 1011, 1686, 1711, 1877 |
| SsiI | CCGC | 7 cut(s) | 183, 598, 901, 1082, 1149, 1492, 1540 |
| SspI | AATATT | 1 cut(s) | 957 |
| SspMI | CTAG | 5 cut(s) | 99, 464, 839, 1040, 1055 |
| StyD4I | CCNGG | 4 cut(s) | 985, 1561, 1865, 1947 |
| StyI | CCWWGG | 1 cut(s) | 1941 |
| TaaI | ACNGT | 3 cut(s) | 493, 746, 804 |
| TaiI | ACGT | 3 cut(s) | 936, 1469, 1679 |
| TaqI | TCGA | 7 cut(s) | 735, 868, 1012, 1234, 1554, 1783, 1812 |
| TatI | WGTACW | 1 cut(s) | 1311 |
| TauI | GCSGC | 1 cut(s) | 600 |
| TfiI | GAWTC | 9 cut(s) | 206, 476, 550, 557, 941, 1106, 1446, 1814, 1903 |
| TscAI | CASTG | 1 cut(s) | 749 |
| TseI | GCWGC | 4 cut(s) | 113, 455, 1187, 1418 |
| TspDTI | ATGAA | 7 cut(s) | 98, 186, 282, 408, 834, 1061, 1847 |
| TspGWI | ACGGA | 3 cut(s) | 208, 431, 1112 |
| TspRI | CASTG | 1 cut(s) | 749 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1522 |
| VpaK11BI | GGWCC | 2 cut(s) | 179, 1945 |
| XapI | RAATTY | 5 cut(s) | 609, 1153, 1212, 1274, 1452 |
| XceI | RCATGY | 2 cut(s) | 350, 1374 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 259 |
| XhoI | CTCGAG | 1 cut(s) | 1011 |
| XmnI | GAANNNNTTC | 3 cut(s) | 642, 1110, 1767 |
| XspI | CTAG | 5 cut(s) | 99, 464, 839, 1040, 1055 |
| Zsp2I | ATGCAT | 2 cut(s) | 1506, 1707 |