TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 195 | 1.6e-56 | TIR domain |
| TIR_2 | PF13676 | 18 - 127 | 6.6e-14 | TIR domain |
| NB-ARC | PF00931 | 197 - 370 | 1.5e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 507 | 2.5e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 1051 - 1209 | 5.5e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 187 |
| Acc36I | ACCTGC | 1 cut(s) | 187 |
| AccBSI | CCGCTC | 1 cut(s) | 2271 |
| AccI | GTMKAC | 1 cut(s) | 86 |
| AccII | CGCG | 1 cut(s) | 1842 |
| AciI | CCGC | 2 cut(s) | 2269, 3718 |
| AclI | AACGTT | 2 cut(s) | 397, 1462 |
| AclWI | GGATC | 4 cut(s) | 329, 1629, 2988, 3051 |
| AcoI | YGGCCR | 3 cut(s) | 488, 837, 1608 |
| AcsI | RAATTY | 9 cut(s) | 1386, 1425, 1519, 1974, 2076, 2236, 3005, 3165, 3446 |
| AcvI | CACGTG | 1 cut(s) | 2193 |
| AfaI | GTAC | 7 cut(s) | 348, 886, 1588, 1699, 2321, 2711, 3136 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 2972, 3551, 3579 |
| AflII | CTTAAG | 1 cut(s) | 2204 |
| AflIII | ACRYGT | 3 cut(s) | 595, 2190, 2192 |
| AjiI | CACGTC | 2 cut(s) | 2928, 3113 |
| AjnI | CCWGG | 5 cut(s) | 576, 1729, 1929, 2092, 2712 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 533, 565, 3618, 3650 |
| Alw21I | GWGCWC | 5 cut(s) | 276, 426, 1083, 1929, 3055 |
| Alw44I | GTGCAC | 2 cut(s) | 272, 3051 |
| AlwI | GGATC | 4 cut(s) | 329, 1629, 2988, 3051 |
| Ama87I | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| ApaLI | GTGCAC | 2 cut(s) | 272, 3051 |
| ApeKI | GCWGC | 8 cut(s) | 5, 8, 452, 735, 2220, 2265, 2887, 2922 |
| ApoI | RAATTY | 9 cut(s) | 1386, 1425, 1519, 1974, 2076, 2236, 3005, 3165, 3446 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 398, 3450 |
| AspLEI | GCGC | 2 cut(s) | 1842, 2308 |
| AspS9I | GGNCC | 6 cut(s) | 123, 406, 574, 892, 968, 1753 |
| AsuC2I | CCSGG | 7 cut(s) | 82, 972, 1118, 1119, 1702, 1703, 3156 |
| AsuHPI | GGTGA | 3 cut(s) | 962, 1133, 3595 |
| AsuII | TTCGAA | 2 cut(s) | 726, 1659 |
| AvaI | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| AvaII | GGWCC | 1 cut(s) | 406 |
| AxyI | CCTNAGG | 1 cut(s) | 1749 |
| BaeGI | GKGCMC | 2 cut(s) | 276, 3055 |
| BalI | TGGCCA | 2 cut(s) | 839, 1610 |
| BanII | GRGCYC | 2 cut(s) | 1083, 1196 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 826, 858, 2303, 2335 |
| BbrPI | CACGTG | 1 cut(s) | 2193 |
| BbsI | GAAGAC | 3 cut(s) | 1233, 1599, 2204 |
| Bbv12I | GWGCWC | 5 cut(s) | 276, 426, 1083, 1929, 3055 |
| BbvCI | CCTCAGC | 1 cut(s) | 693 |
| BbvI | GCAGC | 6 cut(s) | 464, 722, 2232, 2252, 2874, 2909 |
| BccI | CCATC | 8 cut(s) | 108, 326, 346, 1298, 1660, 1764, 3304, 3345 |
| BceAI | ACGGC | 3 cut(s) | 329, 1783, 3731 |
| BciT130I | CCWGG | 5 cut(s) | 578, 1731, 1931, 2094, 2714 |
| BclI | TGATCA | 3 cut(s) | 2523, 2589, 2853 |
| BcnI | CCSGG | 7 cut(s) | 82, 972, 1118, 1119, 1702, 1703, 3156 |
| BfaI | CTAG | 4 cut(s) | 945, 1685, 2900, 2933 |
| BfmI | CTRYAG | 1 cut(s) | 2648 |
| BfrI | CTTAAG | 1 cut(s) | 2204 |
| BfuAI | ACCTGC | 1 cut(s) | 187 |
| BglII | AGATCT | 2 cut(s) | 292, 1687 |
| BisI | GCNGC | 9 cut(s) | 6, 9, 453, 736, 2221, 2266, 2269, 2888, 2923 |
| BlsI | GCNGC | 9 cut(s) | 7, 10, 454, 737, 2222, 2267, 2270, 2889, 2924 |
| Bme18I | GGWCC | 1 cut(s) | 406 |
| BmeT110I | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| BmgBI | CACGTC | 2 cut(s) | 2928, 3113 |
| BmgT120I | GGNCC | 6 cut(s) | 123, 406, 574, 892, 968, 1753 |
| BmiI | GGNNCC | 4 cut(s) | 408, 970, 1195, 3666 |
| BmrI | ACTGGG | 2 cut(s) | 1240, 3126 |
| BmsI | GCATC | 7 cut(s) | 364, 1467, 1661, 2079, 3064, 3116, 3503 |
| BmuI | ACTGGG | 2 cut(s) | 1240, 3126 |
| BpiI | GAAGAC | 3 cut(s) | 1233, 1599, 2204 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2444, 2476, 2927, 2959 |
| BpmI | CTGGAG | 5 cut(s) | 836, 1182, 1713, 2471, 2726 |
| Bpu10I | CCTNAGC | 2 cut(s) | 425, 693 |
| Bpu14I | TTCGAA | 2 cut(s) | 726, 1659 |
| BpuEI | CTTGAG | 8 cut(s) | 1097, 1874, 2297, 2344, 2740, 2759, 2929, 2985 |
| BpuMI | CCSGG | 7 cut(s) | 82, 972, 1118, 1119, 1702, 1703, 3156 |
| Bsa29I | ATCGAT | 1 cut(s) | 1908 |
| BsaAI | YACGTR | 2 cut(s) | 1247, 2193 |
| BsaBI | GATNNNNATC | 3 cut(s) | 825, 957, 3209 |
| BsaI | GGTCTC | 1 cut(s) | 2163 |
| BsaJI | CCNNGG | 9 cut(s) | 35, 970, 1116, 1117, 1701, 1702, 1981, 2891, 3498 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 2972, 3551, 3579 |
| Bse1I | ACTGG | 6 cut(s) | 639, 819, 1235, 2454, 2910, 3132 |
| Bse21I | CCTNAGG | 1 cut(s) | 1749 |
| Bse3DI | GCAATG | 3 cut(s) | 687, 741, 1210 |
| Bse8I | GATNNNNATC | 3 cut(s) | 825, 957, 3209 |
| BseBI | CCWGG | 5 cut(s) | 578, 1731, 1931, 2094, 2714 |
| BseCI | ATCGAT | 1 cut(s) | 1908 |
| BseDI | CCNNGG | 9 cut(s) | 35, 970, 1116, 1117, 1701, 1702, 1981, 2891, 3498 |
| BseGI | GGATG | 8 cut(s) | 30, 268, 643, 826, 1652, 3183, 3203, 3494 |
| BseJI | GATNNNNATC | 3 cut(s) | 825, 957, 3209 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 2972, 3551, 3579 |
| BseMI | GCAATG | 3 cut(s) | 687, 741, 1210 |
| BseMII | CTCAG | 5 cut(s) | 439, 684, 1740, 1757, 3748 |
| BseNI | ACTGG | 6 cut(s) | 639, 819, 1235, 2454, 2910, 3132 |
| BseRI | GAGGAG | 2 cut(s) | 177, 3213 |
| BseSI | GKGCMC | 2 cut(s) | 276, 3055 |
| BseXI | GCAGC | 6 cut(s) | 464, 722, 2232, 2252, 2874, 2909 |
| BseYI | CCCAGC | 1 cut(s) | 2358 |
| BsgI | GTGCAG | 3 cut(s) | 1898, 2908, 2946 |
| Bsh1236I | CGCG | 1 cut(s) | 1842 |
| BshVI | ATCGAT | 1 cut(s) | 1908 |
| BsiHKAI | GWGCWC | 5 cut(s) | 276, 426, 1083, 1929, 3055 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| BsiSI | CCGG | 6 cut(s) | 82, 491, 972, 1118, 1702, 3155 |
| BsiWI | CGTACG | 1 cut(s) | 346 |
| BslFI | GGGAC | 3 cut(s) | 839, 2137, 3734 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 2972, 3551, 3579 |
| BsmBI | CGTCTC | 2 cut(s) | 3119, 3706 |
| BsmFI | GGGAC | 3 cut(s) | 839, 2137, 3734 |
| Bso31I | GGTCTC | 1 cut(s) | 2163 |
| BsoBI | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| Bsp119I | TTCGAA | 2 cut(s) | 726, 1659 |
| Bsp1286I | GDGCHC | 6 cut(s) | 276, 426, 1083, 1196, 1929, 3055 |
| Bsp19I | CCATGG | 1 cut(s) | 2891 |
| BspACI | CCGC | 2 cut(s) | 2269, 3718 |
| BspCNI | CTCAG | 5 cut(s) | 438, 685, 1741, 1758, 3747 |
| BspDI | ATCGAT | 1 cut(s) | 1908 |
| BspFNI | CGCG | 1 cut(s) | 1842 |
| BspLI | GGNNCC | 4 cut(s) | 408, 970, 1195, 3666 |
| BspMAI | CTGCAG | 1 cut(s) | 2652 |
| BspMI | ACCTGC | 1 cut(s) | 187 |
| BspPI | GGATC | 4 cut(s) | 329, 1629, 2988, 3051 |
| BspQI | GCTCTTC | 1 cut(s) | 2193 |
| BspT104I | TTCGAA | 2 cut(s) | 726, 1659 |
| BspTI | CTTAAG | 1 cut(s) | 2204 |
| BspTNI | GGTCTC | 1 cut(s) | 2163 |
| BsrBI | CCGCTC | 1 cut(s) | 2271 |
| BsrDI | GCAATG | 3 cut(s) | 687, 741, 1210 |
| BsrI | ACTGG | 6 cut(s) | 639, 819, 1235, 2454, 2910, 3132 |
| BssECI | CCNNGG | 9 cut(s) | 35, 970, 1116, 1117, 1701, 1702, 1981, 2891, 3498 |
| BssNAI | GTATAC | 1 cut(s) | 87 |
| BssT1I | CCWWGG | 2 cut(s) | 1981, 2891 |
| Bst1107I | GTATAC | 1 cut(s) | 87 |
| Bst2UI | CCWGG | 5 cut(s) | 578, 1731, 1931, 2094, 2714 |
| Bst4CI | ACNGT | 5 cut(s) | 306, 1697, 2669, 2941, 3577 |
| Bst6I | CTCTTC | 3 cut(s) | 721, 2193, 2438 |
| BstAFI | CTTAAG | 1 cut(s) | 2204 |
| BstBAI | YACGTR | 2 cut(s) | 1247, 2193 |
| BstBI | TTCGAA | 2 cut(s) | 726, 1659 |
| BstC8I | GCNNGC | 4 cut(s) | 733, 1877, 2355, 3754 |
| BstDSI | CCRYGG | 1 cut(s) | 2891 |
| BstF5I | GGATG | 8 cut(s) | 30, 268, 643, 826, 1652, 3183, 3203, 3494 |
| BstFNI | CGCG | 1 cut(s) | 1842 |
| BstHHI | GCGC | 2 cut(s) | 1842, 2308 |
| BstNI | CCWGG | 5 cut(s) | 578, 1731, 1931, 2094, 2714 |
| BstSFI | CTRYAG | 1 cut(s) | 2648 |
| BstSLI | GKGCMC | 2 cut(s) | 276, 3055 |
| BstSNI | TACGTA | 1 cut(s) | 1247 |
| BstUI | CGCG | 1 cut(s) | 1842 |
| BstV1I | GCAGC | 6 cut(s) | 464, 722, 2232, 2252, 2874, 2909 |
| BstV2I | GAAGAC | 3 cut(s) | 1233, 1599, 2204 |
| BstX2I | RGATCY | 4 cut(s) | 292, 334, 1621, 1687 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1618 |
| BstYI | RGATCY | 4 cut(s) | 292, 334, 1621, 1687 |
| BstZ17I | GTATAC | 1 cut(s) | 87 |
| Bsu15I | ATCGAT | 1 cut(s) | 1908 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1749 |
| BsuTUI | ATCGAT | 1 cut(s) | 1908 |
| BtgI | CCRYGG | 1 cut(s) | 2891 |
| BtrI | CACGTC | 2 cut(s) | 2928, 3113 |
| BtsCI | GGATG | 8 cut(s) | 30, 268, 643, 826, 1652, 3183, 3203, 3494 |
| BtsIMutI | CAGTG | 4 cut(s) | 205, 632, 3573, 3742 |
| BveI | ACCTGC | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 4 cut(s) | 733, 1877, 2355, 3754 |
| CfoI | GCGC | 2 cut(s) | 1842, 2308 |
| Cfr13I | GGNCC | 6 cut(s) | 123, 406, 574, 892, 968, 1753 |
| Cfr9I | CCCGGG | 2 cut(s) | 1117, 1701 |
| ClaI | ATCGAT | 1 cut(s) | 1908 |
| CseI | GACGC | 1 cut(s) | 1831 |
| Csp6I | GTAC | 7 cut(s) | 347, 885, 1587, 1698, 2320, 2710, 3135 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1128, 1163 |
| CviQI | GTAC | 7 cut(s) | 347, 885, 1587, 1698, 2320, 2710, 3135 |
| EaeI | YGGCCR | 3 cut(s) | 488, 837, 1608 |
| Eam1104I | CTCTTC | 3 cut(s) | 721, 2193, 2438 |
| EarI | CTCTTC | 3 cut(s) | 721, 2193, 2438 |
| Ecl136II | GAGCTC | 1 cut(s) | 1081 |
| Eco105I | TACGTA | 1 cut(s) | 1247 |
| Eco130I | CCWWGG | 2 cut(s) | 1981, 2891 |
| Eco147I | AGGCCT | 2 cut(s) | 3378, 3503 |
| Eco24I | GRGCYC | 2 cut(s) | 1083, 1196 |
| Eco31I | GGTCTC | 1 cut(s) | 2163 |
| Eco32I | GATATC | 2 cut(s) | 1342, 3694 |
| Eco47I | GGWCC | 1 cut(s) | 406 |
| Eco53kI | GAGCTC | 1 cut(s) | 1081 |
| Eco72I | CACGTG | 1 cut(s) | 2193 |
| Eco81I | CCTNAGG | 1 cut(s) | 1749 |
| Eco88I | CYCGRG | 4 cut(s) | 1117, 1701, 1967, 2162 |
| EcoICRI | GAGCTC | 1 cut(s) | 1081 |
| EcoO109I | RGGNCCY | 4 cut(s) | 406, 574, 892, 1753 |
| EcoRI | GAATTC | 3 cut(s) | 1974, 2236, 3005 |
| EcoRII | CCWGG | 5 cut(s) | 576, 1729, 1929, 2092, 2712 |
| EcoRV | GATATC | 2 cut(s) | 1342, 3694 |
| EcoT14I | CCWWGG | 2 cut(s) | 1981, 2891 |
| EcoT22I | ATGCAT | 4 cut(s) | 379, 1243, 1482, 3266 |
| EcoT38I | GRGCYC | 2 cut(s) | 1083, 1196 |
| ErhI | CCWWGG | 2 cut(s) | 1981, 2891 |
| Esp3I | CGTCTC | 2 cut(s) | 3119, 3706 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 597, 629, 2209, 2241 |
| FaqI | GGGAC | 3 cut(s) | 839, 2137, 3734 |
| FauI | CCCGC | 1 cut(s) | 3711 |
| FauNDI | CATATG | 2 cut(s) | 1639, 1836 |
| FbaI | TGATCA | 3 cut(s) | 2523, 2589, 2853 |
| FblI | GTMKAC | 1 cut(s) | 86 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 9, 453, 736, 2221, 2266, 2269, 2888, 2923 |
| FokI | GGATG | 8 cut(s) | 17, 275, 650, 833, 1639, 3190, 3210, 3481 |
| FriOI | GRGCYC | 2 cut(s) | 1083, 1196 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 9, 453, 736, 2221, 2266, 2269, 2888, 2923 |
| FspBI | CTAG | 4 cut(s) | 945, 1685, 2900, 2933 |
| GlaI | GCGC | 2 cut(s) | 1841, 2307 |
| GluI | GCNGC | 9 cut(s) | 6, 9, 453, 736, 2221, 2266, 2269, 2888, 2923 |
| GsaI | CCCAGC | 1 cut(s) | 2362 |
| GsuI | CTGGAG | 5 cut(s) | 836, 1182, 1713, 2471, 2726 |
| HapII | CCGG | 6 cut(s) | 82, 491, 972, 1118, 1702, 3155 |
| HgaI | GACGC | 1 cut(s) | 1831 |
| HhaI | GCGC | 2 cut(s) | 1842, 2308 |
| Hin6I | GCGC | 2 cut(s) | 1840, 2306 |
| HinP1I | GCGC | 2 cut(s) | 1840, 2306 |
| HincII | GTYRAC | 2 cut(s) | 1711, 2992 |
| HindII | GTYRAC | 2 cut(s) | 1711, 2992 |
| HindIII | AAGCTT | 6 cut(s) | 209, 729, 2036, 2168, 3215, 3754 |
| HpaII | CCGG | 6 cut(s) | 82, 491, 972, 1118, 1702, 3155 |
| HphI | GGTGA | 3 cut(s) | 962, 1133, 3595 |
| Hpy166II | GTNNAC | 7 cut(s) | 87, 274, 809, 1460, 1711, 2992, 3053 |
| Hpy8I | GTNNAC | 7 cut(s) | 87, 274, 809, 1460, 1711, 2992, 3053 |
| Hpy99I | CGWCG | 3 cut(s) | 123, 1566, 1804 |
| HpyCH4III | ACNGT | 5 cut(s) | 306, 1697, 2669, 2941, 3577 |
| HspAI | GCGC | 2 cut(s) | 1840, 2306 |
| Ksp22I | TGATCA | 3 cut(s) | 2523, 2589, 2853 |
| LguI | GCTCTTC | 1 cut(s) | 2193 |
| LmnI | GCTCC | 5 cut(s) | 1199, 1893, 2069, 2247, 3057 |
| Lsp1109I | GCAGC | 6 cut(s) | 464, 722, 2232, 2252, 2874, 2909 |
| LweI | GCATC | 7 cut(s) | 364, 1467, 1661, 2079, 3064, 3116, 3503 |
| MaeI | CTAG | 4 cut(s) | 945, 1685, 2900, 2933 |
| MaeIII | GTNAC | 5 cut(s) | 988, 1916, 2928, 3251, 3356 |
| MbiI | CCGCTC | 1 cut(s) | 2271 |
| MfeI | CAATTG | 1 cut(s) | 2857 |
| MflI | RGATCY | 4 cut(s) | 292, 334, 1621, 1687 |
| MhlI | GDGCHC | 6 cut(s) | 276, 426, 1083, 1196, 1929, 3055 |
| MlsI | TGGCCA | 2 cut(s) | 839, 1610 |
| MluNI | TGGCCA | 2 cut(s) | 839, 1610 |
| MmeI | TCCRAC | 1 cut(s) | 562 |
| Mox20I | TGGCCA | 2 cut(s) | 839, 1610 |
| Mph1103I | ATGCAT | 4 cut(s) | 379, 1243, 1482, 3266 |
| MroXI | GAANNNNTTC | 2 cut(s) | 398, 3450 |
| MscI | TGGCCA | 2 cut(s) | 839, 1610 |
| MseI | TTAA | 8 cut(s) | 507, 1050, 1515, 1629, 1758, 2187, 2205, 2910 |
| MslI | CAYNNNNRTG | 3 cut(s) | 105, 1610, 1616 |
| Msp20I | TGGCCA | 2 cut(s) | 839, 1610 |
| MspCI | CTTAAG | 1 cut(s) | 2204 |
| MspI | CCGG | 6 cut(s) | 82, 491, 972, 1118, 1702, 3155 |
| MunI | CAATTG | 1 cut(s) | 2857 |
| MvaI | CCWGG | 5 cut(s) | 578, 1731, 1931, 2094, 2714 |
| MvnI | CGCG | 1 cut(s) | 1842 |
| NciI | CCSGG | 7 cut(s) | 82, 972, 1118, 1119, 1702, 1703, 3156 |
| NcoI | CCATGG | 1 cut(s) | 2891 |
| NdeI | CATATG | 2 cut(s) | 1639, 1836 |
| NlaIV | GGNNCC | 4 cut(s) | 408, 970, 1195, 3666 |
| NmuCI | GTSAC | 2 cut(s) | 2928, 3356 |
| NsiI | ATGCAT | 4 cut(s) | 379, 1243, 1482, 3266 |
| NspV | TTCGAA | 2 cut(s) | 726, 1659 |
| PaeR7I | CTCGAG | 2 cut(s) | 1967, 2162 |
| PaqCI | CACCTGC | 1 cut(s) | 187 |
| PceI | AGGCCT | 2 cut(s) | 3378, 3503 |
| PciSI | GCTCTTC | 1 cut(s) | 2193 |
| PdmI | GAANNNNTTC | 2 cut(s) | 398, 3450 |
| Pfl23II | CGTACG | 1 cut(s) | 346 |
| PfoI | TCCNGGA | 1 cut(s) | 3154 |
| PkrI | GCNGC | 9 cut(s) | 7, 10, 454, 737, 2222, 2267, 2270, 2889, 2924 |
| PmaCI | CACGTG | 1 cut(s) | 2193 |
| PmlI | CACGTG | 1 cut(s) | 2193 |
| Ppu21I | YACGTR | 2 cut(s) | 1247, 2193 |
| PpuMI | RGGWCCY | 1 cut(s) | 406 |
| Psp124BI | GAGCTC | 1 cut(s) | 1083 |
| Psp1406I | AACGTT | 2 cut(s) | 397, 1462 |
| Psp5II | RGGWCCY | 1 cut(s) | 406 |
| Psp6I | CCWGG | 5 cut(s) | 576, 1729, 1929, 2092, 2712 |
| PspCI | CACGTG | 1 cut(s) | 2193 |
| PspFI | CCCAGC | 1 cut(s) | 2358 |
| PspGI | CCWGG | 5 cut(s) | 576, 1729, 1929, 2092, 2712 |
| PspLI | CGTACG | 1 cut(s) | 346 |
| PspN4I | GGNNCC | 4 cut(s) | 408, 970, 1195, 3666 |
| PspPI | GGNCC | 6 cut(s) | 123, 406, 574, 892, 968, 1753 |
| PspPPI | RGGWCCY | 1 cut(s) | 406 |
| PstI | CTGCAG | 1 cut(s) | 2652 |
| PsuI | RGATCY | 4 cut(s) | 292, 334, 1621, 1687 |
| RsaI | GTAC | 7 cut(s) | 348, 886, 1588, 1699, 2321, 2711, 3136 |
| RsaNI | GTAC | 7 cut(s) | 347, 885, 1587, 1698, 2320, 2710, 3135 |
| RseI | CAYNNNNRTG | 3 cut(s) | 105, 1610, 1616 |
| SacI | GAGCTC | 1 cut(s) | 1083 |
| SapI | GCTCTTC | 1 cut(s) | 2193 |
| SaqAI | TTAA | 8 cut(s) | 507, 1050, 1515, 1629, 1758, 2187, 2205, 2910 |
| SatI | GCNGC | 9 cut(s) | 6, 9, 453, 736, 2221, 2266, 2269, 2888, 2923 |
| Sau96I | GGNCC | 6 cut(s) | 123, 406, 574, 892, 968, 1753 |
| SduI | GDGCHC | 6 cut(s) | 276, 426, 1083, 1196, 1929, 3055 |
| SfaNI | GCATC | 7 cut(s) | 364, 1467, 1661, 2079, 3064, 3116, 3503 |
| SfcI | CTRYAG | 1 cut(s) | 2648 |
| Sfr274I | CTCGAG | 2 cut(s) | 1967, 2162 |
| SfuI | TTCGAA | 2 cut(s) | 726, 1659 |
| SinI | GGWCC | 1 cut(s) | 406 |
| SlaI | CTCGAG | 2 cut(s) | 1967, 2162 |
| SmaI | CCCGGG | 2 cut(s) | 1119, 1703 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 105, 1610, 1616 |
| SnaBI | TACGTA | 1 cut(s) | 1247 |
| SseBI | AGGCCT | 2 cut(s) | 3378, 3503 |
| SsiI | CCGC | 2 cut(s) | 2269, 3718 |
| SspI | AATATT | 2 cut(s) | 1203, 3145 |
| SspMI | CTAG | 4 cut(s) | 945, 1685, 2900, 2933 |
| SstI | GAGCTC | 1 cut(s) | 1083 |
| StuI | AGGCCT | 2 cut(s) | 3378, 3503 |
| StyI | CCWWGG | 2 cut(s) | 1981, 2891 |
| TaaI | ACNGT | 5 cut(s) | 306, 1697, 2669, 2941, 3577 |
| TatI | WGTACW | 2 cut(s) | 884, 2319 |
| TauI | GCSGC | 1 cut(s) | 2271 |
| Tru1I | TTAA | 8 cut(s) | 507, 1050, 1515, 1629, 1758, 2187, 2205, 2910 |
| Tru9I | TTAA | 8 cut(s) | 507, 1050, 1515, 1629, 1758, 2187, 2205, 2910 |
| TscAI | CASTG | 4 cut(s) | 205, 639, 3580, 3742 |
| TseFI | GTSAC | 2 cut(s) | 2928, 3356 |
| TseI | GCWGC | 8 cut(s) | 5, 8, 452, 735, 2220, 2265, 2887, 2922 |
| Tsp45I | GTSAC | 2 cut(s) | 2928, 3356 |
| TspGWI | ACGGA | 3 cut(s) | 1186, 1441, 3070 |
| TspMI | CCCGGG | 2 cut(s) | 1117, 1701 |
| TspRI | CASTG | 4 cut(s) | 205, 639, 3580, 3742 |
| Vha464I | CTTAAG | 1 cut(s) | 2204 |
| VneI | GTGCAC | 2 cut(s) | 272, 3051 |
| VpaK11BI | GGWCC | 1 cut(s) | 406 |
| XapI | RAATTY | 9 cut(s) | 1386, 1425, 1519, 1974, 2076, 2236, 3005, 3165, 3446 |
| XbaI | TCTAGA | 1 cut(s) | 2899 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2366 |
| XhoI | CTCGAG | 2 cut(s) | 1967, 2162 |
| XmaI | CCCGGG | 2 cut(s) | 1117, 1701 |
| XmiI | GTMKAC | 1 cut(s) | 86 |
| XmnI | GAANNNNTTC | 2 cut(s) | 398, 3450 |
| XspI | CTAG | 4 cut(s) | 945, 1685, 2900, 2933 |
| Zsp2I | ATGCAT | 4 cut(s) | 379, 1243, 1482, 3266 |