RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 97 - 167 | 2.8e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 424 - 604 | 2.9e-09 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 430 - 523 | 2.8e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 507 - 592 | 2.2e-07 | Leucine-rich repeat region |
| C-JID | PF20160 | 673 - 820 | 6.6e-18 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 279, 1977 |
| AarI | CACCTGC | 1 cut(s) | 1707 |
| Acc36I | ACCTGC | 1 cut(s) | 1707 |
| AccB1I | GGYRCC | 1 cut(s) | 895 |
| AccI | GTMKAC | 1 cut(s) | 1249 |
| AciI | CCGC | 3 cut(s) | 1161, 1179, 1753 |
| AclI | AACGTT | 2 cut(s) | 1499, 1972 |
| AclWI | GGATC | 2 cut(s) | 649, 2068 |
| AcuI | CTGAAG | 6 cut(s) | 41, 452, 786, 990, 1439, 1983 |
| AcvI | CACGTG | 1 cut(s) | 2278 |
| AcyI | GRCGYC | 1 cut(s) | 896 |
| AdeI | CACNNNGTG | 1 cut(s) | 1606 |
| AfaI | GTAC | 6 cut(s) | 255, 505, 746, 2015, 2101, 2255 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1879 |
| AflIII | ACRYGT | 3 cut(s) | 609, 2277, 2423 |
| AgeI | ACCGGT | 1 cut(s) | 1440 |
| AjiI | CACGTC | 1 cut(s) | 612 |
| AjnI | CCWGG | 2 cut(s) | 1616, 1823 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 387, 419 |
| Alw21I | GWGCWC | 2 cut(s) | 1559, 1743 |
| Alw26I | GTCTC | 9 cut(s) | 96, 262, 423, 783, 1202, 1211, 1279, 1529, 1698 |
| AlwI | GGATC | 2 cut(s) | 649, 2068 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 562, 581 |
| AoxI | GGCC | 1 cut(s) | 2361 |
| ApeKI | GCWGC | 2 cut(s) | 1750, 1773 |
| AsiGI | ACCGGT | 1 cut(s) | 1440 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 54, 1041, 1452 |
| AspLEI | GCGC | 3 cut(s) | 898, 1704, 1948 |
| AspS9I | GGNCC | 2 cut(s) | 811, 2268 |
| AsuC2I | CCSGG | 1 cut(s) | 516 |
| AsuHPI | GGTGA | 7 cut(s) | 20, 139, 1150, 1255, 1688, 2213, 2347 |
| AsuII | TTCGAA | 2 cut(s) | 871, 2471 |
| AvaII | GGWCC | 2 cut(s) | 811, 2268 |
| BanI | GGYRCC | 1 cut(s) | 895 |
| BanII | GRGCYC | 3 cut(s) | 516, 541, 1743 |
| BauI | CACGAG | 2 cut(s) | 1604, 1717 |
| BbrPI | CACGTG | 1 cut(s) | 2278 |
| BbsI | GAAGAC | 1 cut(s) | 210 |
| Bbv12I | GWGCWC | 2 cut(s) | 1559, 1743 |
| BbvI | GCAGC | 2 cut(s) | 1737, 1760 |
| BccI | CCATC | 6 cut(s) | 334, 844, 1957, 2055, 2081, 2397 |
| BceAI | ACGGC | 1 cut(s) | 2193 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1390, 1424 |
| BciT130I | CCWGG | 2 cut(s) | 1618, 1825 |
| BcnI | CCSGG | 1 cut(s) | 516 |
| BcoDI | GTCTC | 9 cut(s) | 96, 262, 423, 783, 1202, 1211, 1279, 1529, 1698 |
| BfaI | CTAG | 5 cut(s) | 243, 615, 1989, 2265, 2384 |
| BfmI | CTRYAG | 2 cut(s) | 880, 1784 |
| BfoI | RGCGCY | 1 cut(s) | 899 |
| BfuAI | ACCTGC | 1 cut(s) | 1707 |
| BglII | AGATCT | 3 cut(s) | 681, 979, 1633 |
| BisI | GCNGC | 2 cut(s) | 1751, 1774 |
| BlsI | GCNGC | 2 cut(s) | 1752, 1775 |
| Bme1390I | CCNGG | 3 cut(s) | 516, 1618, 1825 |
| Bme18I | GGWCC | 2 cut(s) | 811, 2268 |
| BmgBI | CACGTC | 1 cut(s) | 612 |
| BmgT120I | GGNCC | 2 cut(s) | 811, 2268 |
| BmiI | GGNNCC | 5 cut(s) | 540, 812, 897, 1338, 1645 |
| BmrFI | CCNGG | 3 cut(s) | 516, 1618, 1825 |
| BmrI | ACTGGG | 3 cut(s) | 217, 817, 1739 |
| BmsI | GCATC | 8 cut(s) | 444, 648, 715, 1113, 1190, 1482, 2318, 2443 |
| BmuI | ACTGGG | 3 cut(s) | 217, 817, 1739 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2400 |
| BpiI | GAAGAC | 1 cut(s) | 210 |
| BpmI | CTGGAG | 3 cut(s) | 525, 584, 2070 |
| Bpu14I | TTCGAA | 2 cut(s) | 871, 2471 |
| BpuEI | CTTGAG | 6 cut(s) | 662, 794, 911, 1301, 1540, 2433 |
| BpuMI | CCSGG | 1 cut(s) | 516 |
| Bsa29I | ATCGAT | 2 cut(s) | 942, 1400 |
| BsaAI | YACGTR | 1 cut(s) | 2278 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1632 |
| BsaHI | GRCGYC | 1 cut(s) | 896 |
| BsaI | GGTCTC | 1 cut(s) | 1211 |
| BsaJI | CCNNGG | 4 cut(s) | 1201, 1616, 1824, 2358 |
| BsaWI | WCCGGW | 1 cut(s) | 1440 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1725, 1755 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1879 |
| Bse118I | RCCGGY | 1 cut(s) | 1440 |
| Bse1I | ACTGG | 5 cut(s) | 212, 812, 1745, 1884, 2271 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1632 |
| BseBI | CCWGG | 2 cut(s) | 1618, 1825 |
| BseCI | ATCGAT | 2 cut(s) | 942, 1400 |
| BseDI | CCNNGG | 4 cut(s) | 1201, 1616, 1824, 2358 |
| BseGI | GGATG | 8 cut(s) | 217, 345, 349, 514, 553, 644, 1888, 1949 |
| BseJI | GATNNNNATC | 1 cut(s) | 1632 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1879 |
| BseMII | CTCAG | 6 cut(s) | 684, 1133, 1214, 1561, 1700, 1886 |
| BseNI | ACTGG | 5 cut(s) | 212, 812, 1745, 1884, 2271 |
| BseXI | GCAGC | 2 cut(s) | 1737, 1760 |
| BshFI | GGCC | 1 cut(s) | 2363 |
| BshNI | GGYRCC | 1 cut(s) | 895 |
| BshTI | ACCGGT | 1 cut(s) | 1440 |
| BshVI | ATCGAT | 2 cut(s) | 942, 1400 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1559, 1743 |
| BsiSI | CCGG | 2 cut(s) | 516, 1441 |
| BslFI | GGGAC | 4 cut(s) | 824, 1104, 1448, 2008 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1879 |
| BsmAI | GTCTC | 9 cut(s) | 96, 262, 423, 783, 1202, 1211, 1279, 1529, 1698 |
| BsmFI | GGGAC | 4 cut(s) | 824, 1104, 1448, 2008 |
| BsmI | GAATGC | 3 cut(s) | 311, 879, 1413 |
| BsnI | GGCC | 1 cut(s) | 2363 |
| Bso31I | GGTCTC | 1 cut(s) | 1211 |
| Bsp119I | TTCGAA | 2 cut(s) | 871, 2471 |
| Bsp1286I | GDGCHC | 4 cut(s) | 516, 541, 1559, 1743 |
| BspACI | CCGC | 3 cut(s) | 1161, 1179, 1753 |
| BspANI | GGCC | 1 cut(s) | 2363 |
| BspCNI | CTCAG | 6 cut(s) | 685, 1132, 1215, 1560, 1699, 1887 |
| BspDI | ATCGAT | 2 cut(s) | 942, 1400 |
| BspHI | TCATGA | 1 cut(s) | 721 |
| BspLI | GGNNCC | 5 cut(s) | 540, 812, 897, 1338, 1645 |
| BspMAI | CTGCAG | 1 cut(s) | 1788 |
| BspMI | ACCTGC | 1 cut(s) | 1707 |
| BspPI | GGATC | 2 cut(s) | 649, 2068 |
| BspQI | GCTCTTC | 1 cut(s) | 1380 |
| BspT104I | TTCGAA | 2 cut(s) | 871, 2471 |
| BspT107I | GGYRCC | 1 cut(s) | 895 |
| BspTNI | GGTCTC | 1 cut(s) | 1211 |
| BsrFI | RCCGGY | 1 cut(s) | 1440 |
| BsrI | ACTGG | 5 cut(s) | 212, 812, 1745, 1884, 2271 |
| BssAI | RCCGGY | 1 cut(s) | 1440 |
| BssECI | CCNNGG | 4 cut(s) | 1201, 1616, 1824, 2358 |
| BssNI | GRCGYC | 1 cut(s) | 896 |
| BssSI | CACGAG | 2 cut(s) | 1604, 1717 |
| BssT1I | CCWWGG | 2 cut(s) | 1201, 2358 |
| Bst2BI | CACGAG | 2 cut(s) | 1604, 1717 |
| Bst2UI | CCWGG | 2 cut(s) | 1618, 1825 |
| Bst4CI | ACNGT | 3 cut(s) | 1097, 1481, 1792 |
| Bst6I | CTCTTC | 4 cut(s) | 210, 837, 1380, 2304 |
| BstACI | GRCGYC | 1 cut(s) | 896 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 463 |
| BstBAI | YACGTR | 1 cut(s) | 2278 |
| BstBI | TTCGAA | 2 cut(s) | 871, 2471 |
| BstC8I | GCNNGC | 3 cut(s) | 75, 325, 1179 |
| BstF5I | GGATG | 8 cut(s) | 217, 345, 349, 514, 553, 644, 1888, 1949 |
| BstH2I | RGCGCY | 1 cut(s) | 899 |
| BstHHI | GCGC | 3 cut(s) | 898, 1704, 1948 |
| BstMAI | GTCTC | 9 cut(s) | 96, 262, 423, 783, 1202, 1211, 1279, 1529, 1698 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 463, 874, 1417, 1747, 2453 |
| BstNI | CCWGG | 2 cut(s) | 1618, 1825 |
| BstNSI | RCATGY | 2 cut(s) | 77, 327 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2400 |
| BstSCI | CCNGG | 3 cut(s) | 514, 1616, 1823 |
| BstSFI | CTRYAG | 2 cut(s) | 880, 1784 |
| BstV1I | GCAGC | 2 cut(s) | 1737, 1760 |
| BstV2I | GAAGAC | 1 cut(s) | 210 |
| BstX2I | RGATCY | 4 cut(s) | 681, 979, 1633, 2060 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 923 |
| BstYI | RGATCY | 4 cut(s) | 681, 979, 1633, 2060 |
| Bsu15I | ATCGAT | 2 cut(s) | 942, 1400 |
| BsuRI | GGCC | 1 cut(s) | 2363 |
| BsuTUI | ATCGAT | 2 cut(s) | 942, 1400 |
| BtrI | CACGTC | 1 cut(s) | 612 |
| BtsCI | GGATG | 8 cut(s) | 217, 345, 349, 514, 553, 644, 1888, 1949 |
| BtsI | GCAGTG | 2 cut(s) | 187, 1781 |
| BtsIMutI | CAGTG | 8 cut(s) | 187, 1093, 1199, 1296, 1752, 1781, 1892, 1915 |
| BveI | ACCTGC | 1 cut(s) | 1707 |
| Cac8I | GCNNGC | 3 cut(s) | 75, 325, 1179 |
| CaiI | CAGNNNCTG | 2 cut(s) | 562, 581 |
| CciI | TCATGA | 1 cut(s) | 721 |
| CfoI | GCGC | 3 cut(s) | 898, 1704, 1948 |
| Cfr10I | RCCGGY | 1 cut(s) | 1440 |
| Cfr13I | GGNCC | 2 cut(s) | 811, 2268 |
| ClaI | ATCGAT | 2 cut(s) | 942, 1400 |
| CseI | GACGC | 2 cut(s) | 1660, 1922 |
| Csp6I | GTAC | 6 cut(s) | 254, 504, 745, 2014, 2100, 2254 |
| CspAI | ACCGGT | 1 cut(s) | 1440 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2407, 2442 |
| CviAII | CATG | 4 cut(s) | 74, 324, 458, 722 |
| CviQI | GTAC | 6 cut(s) | 254, 504, 745, 2014, 2100, 2254 |
| DinI | GGCGCC | 1 cut(s) | 897 |
| DraI | TTTAAA | 4 cut(s) | 1315, 1368, 1485, 1536 |
| DraIII | CACNNNGTG | 1 cut(s) | 1606 |
| Eam1104I | CTCTTC | 4 cut(s) | 210, 837, 1380, 2304 |
| EarI | CTCTTC | 4 cut(s) | 210, 837, 1380, 2304 |
| Ecl136II | GAGCTC | 1 cut(s) | 1741 |
| Eco130I | CCWWGG | 2 cut(s) | 1201, 2358 |
| Eco147I | AGGCCT | 1 cut(s) | 2363 |
| Eco24I | GRGCYC | 3 cut(s) | 516, 541, 1743 |
| Eco31I | GGTCTC | 1 cut(s) | 1211 |
| Eco32I | GATATC | 1 cut(s) | 319 |
| Eco47I | GGWCC | 2 cut(s) | 811, 2268 |
| Eco53kI | GAGCTC | 1 cut(s) | 1741 |
| Eco57I | CTGAAG | 6 cut(s) | 41, 452, 786, 990, 1439, 1983 |
| Eco72I | CACGTG | 1 cut(s) | 2278 |
| EcoICRI | GAGCTC | 1 cut(s) | 1741 |
| EcoRI | GAATTC | 3 cut(s) | 396, 672, 1139 |
| EcoRII | CCWGG | 2 cut(s) | 1616, 1823 |
| EcoRV | GATATC | 1 cut(s) | 319 |
| EcoT14I | CCWWGG | 2 cut(s) | 1201, 2358 |
| EcoT22I | ATGCAT | 3 cut(s) | 75, 459, 599 |
| EcoT38I | GRGCYC | 3 cut(s) | 516, 541, 1743 |
| EgeI | GGCGCC | 1 cut(s) | 897 |
| EheI | GGCGCC | 1 cut(s) | 897 |
| ErhI | CCWWGG | 2 cut(s) | 1201, 2358 |
| FaeI | CATG | 4 cut(s) | 77, 327, 461, 725 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 293, 325 |
| FaqI | GGGAC | 4 cut(s) | 824, 1104, 1448, 2008 |
| FatI | CATG | 4 cut(s) | 73, 323, 457, 721 |
| FauI | CCCGC | 1 cut(s) | 1186 |
| FblI | GTMKAC | 1 cut(s) | 1249 |
| Fnu4HI | GCNGC | 2 cut(s) | 1751, 1774 |
| FokI | GGATG | 8 cut(s) | 224, 352, 356, 521, 560, 631, 1895, 1936 |
| FriOI | GRGCYC | 3 cut(s) | 516, 541, 1743 |
| Fsp4HI | GCNGC | 2 cut(s) | 1751, 1774 |
| FspBI | CTAG | 5 cut(s) | 243, 615, 1989, 2265, 2384 |
| GlaI | GCGC | 3 cut(s) | 897, 1703, 1947 |
| GluI | GCNGC | 2 cut(s) | 1751, 1774 |
| GsuI | CTGGAG | 3 cut(s) | 525, 584, 2070 |
| HaeII | RGCGCY | 1 cut(s) | 899 |
| HaeIII | GGCC | 1 cut(s) | 2363 |
| HapII | CCGG | 2 cut(s) | 516, 1441 |
| HgaI | GACGC | 2 cut(s) | 1660, 1922 |
| HhaI | GCGC | 3 cut(s) | 898, 1704, 1948 |
| Hin1I | GRCGYC | 1 cut(s) | 896 |
| Hin1II | CATG | 4 cut(s) | 77, 327, 461, 725 |
| Hin6I | GCGC | 3 cut(s) | 896, 1702, 1946 |
| HinP1I | GCGC | 3 cut(s) | 896, 1702, 1946 |
| HincII | GTYRAC | 2 cut(s) | 607, 2070 |
| HindII | GTYRAC | 2 cut(s) | 607, 2070 |
| HindIII | AAGCTT | 3 cut(s) | 1070, 1680, 2078 |
| HinfI | GANTC | 8 cut(s) | 350, 776, 919, 1042, 1246, 1522, 1778, 2430 |
| HpaI | GTTAAC | 1 cut(s) | 2070 |
| HpaII | CCGG | 2 cut(s) | 516, 1441 |
| HphI | GGTGA | 7 cut(s) | 20, 139, 1150, 1255, 1688, 2213, 2347 |
| Hpy166II | GTNNAC | 5 cut(s) | 607, 745, 1250, 2014, 2070 |
| Hpy188I | TCNGA | 8 cut(s) | 483, 694, 766, 990, 1107, 1122, 1353, 2327 |
| Hpy8I | GTNNAC | 5 cut(s) | 607, 745, 1250, 2014, 2070 |
| HpyAV | CCTTC | 9 cut(s) | 65, 194, 295, 658, 761, 1056, 1463, 1674, 1733 |
| HpyCH4III | ACNGT | 3 cut(s) | 1097, 1481, 1792 |
| HpyCH4IV | ACGT | 7 cut(s) | 523, 603, 611, 1499, 1972, 2277, 2423 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 463, 874, 1417, 1747, 2453 |
| HpySE526I | ACGT | 7 cut(s) | 523, 603, 611, 1499, 1972, 2277, 2423 |
| Hsp92I | GRCGYC | 1 cut(s) | 896 |
| Hsp92II | CATG | 4 cut(s) | 77, 327, 461, 725 |
| HspAI | GCGC | 3 cut(s) | 896, 1702, 1946 |
| KasI | GGCGCC | 1 cut(s) | 895 |
| KspAI | GTTAAC | 1 cut(s) | 2070 |
| LguI | GCTCTTC | 1 cut(s) | 1380 |
| LmnI | GCTCC | 4 cut(s) | 544, 1336, 1746, 2336 |
| Lsp1109I | GCAGC | 2 cut(s) | 1737, 1760 |
| LweI | GCATC | 8 cut(s) | 444, 648, 715, 1113, 1190, 1482, 2318, 2443 |
| MaeI | CTAG | 5 cut(s) | 243, 615, 1989, 2265, 2384 |
| MaeII | ACGT | 7 cut(s) | 523, 603, 611, 1499, 1972, 2277, 2423 |
| MaeIII | GTNAC | 8 cut(s) | 1620, 1779, 1910, 2219, 2273, 2353, 2393, 2402 |
| MboII | GAAGA | 9 cut(s) | 212, 215, 227, 302, 824, 1073, 1397, 2055, 2321 |
| MfeI | CAATTG | 2 cut(s) | 1711, 2304 |
| MflI | RGATCY | 4 cut(s) | 681, 979, 1633, 2060 |
| MhlI | GDGCHC | 4 cut(s) | 516, 541, 1559, 1743 |
| Mly113I | GGCGCC | 1 cut(s) | 896 |
| MlyI | GAGTC | 4 cut(s) | 785, 1255, 1531, 1787 |
| MmeI | TCCRAC | 1 cut(s) | 1977 |
| Mph1103I | ATGCAT | 3 cut(s) | 75, 459, 599 |
| MroXI | GAANNNNTTC | 3 cut(s) | 54, 1041, 1452 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2052 |
| MspI | CCGG | 2 cut(s) | 516, 1441 |
| MspR9I | CCNGG | 3 cut(s) | 516, 1618, 1825 |
| MunI | CAATTG | 2 cut(s) | 1711, 2304 |
| Mva1269I | GAATGC | 3 cut(s) | 311, 879, 1413 |
| MvaI | CCWGG | 2 cut(s) | 1618, 1825 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 463, 874, 1417, 1747, 2453 |
| NarI | GGCGCC | 1 cut(s) | 896 |
| NciI | CCSGG | 1 cut(s) | 516 |
| NlaIII | CATG | 4 cut(s) | 77, 327, 461, 725 |
| NlaIV | GGNNCC | 5 cut(s) | 540, 812, 897, 1338, 1645 |
| NmeAIII | GCCGAG | 1 cut(s) | 2482 |
| NmuCI | GTSAC | 6 cut(s) | 1779, 1910, 2273, 2353, 2393, 2402 |
| NsiI | ATGCAT | 3 cut(s) | 75, 459, 599 |
| NspI | RCATGY | 2 cut(s) | 77, 327 |
| NspV | TTCGAA | 2 cut(s) | 871, 2471 |
| PaeI | GCATGC | 2 cut(s) | 77, 327 |
| PagI | TCATGA | 1 cut(s) | 721 |
| PaqCI | CACCTGC | 1 cut(s) | 1707 |
| PceI | AGGCCT | 1 cut(s) | 2363 |
| PciSI | GCTCTTC | 1 cut(s) | 1380 |
| PctI | GAATGC | 3 cut(s) | 311, 879, 1413 |
| PdmI | GAANNNNTTC | 3 cut(s) | 54, 1041, 1452 |
| PfeI | GAWTC | 4 cut(s) | 350, 919, 1042, 2430 |
| PinAI | ACCGGT | 1 cut(s) | 1440 |
| PkrI | GCNGC | 2 cut(s) | 1752, 1775 |
| PleI | GAGTC | 4 cut(s) | 784, 1254, 1530, 1786 |
| PluTI | GGCGCC | 1 cut(s) | 899 |
| PmaCI | CACGTG | 1 cut(s) | 2278 |
| PmlI | CACGTG | 1 cut(s) | 2278 |
| PpsI | GAGTC | 4 cut(s) | 784, 1254, 1530, 1786 |
| Ppu21I | YACGTR | 1 cut(s) | 2278 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2400 |
| PsiI | TTATAA | 2 cut(s) | 279, 1977 |
| Psp124BI | GAGCTC | 1 cut(s) | 1743 |
| Psp1406I | AACGTT | 2 cut(s) | 1499, 1972 |
| Psp6I | CCWGG | 2 cut(s) | 1616, 1823 |
| PspCI | CACGTG | 1 cut(s) | 2278 |
| PspGI | CCWGG | 2 cut(s) | 1616, 1823 |
| PspN4I | GGNNCC | 5 cut(s) | 540, 812, 897, 1338, 1645 |
| PspPI | GGNCC | 2 cut(s) | 811, 2268 |
| PstI | CTGCAG | 1 cut(s) | 1788 |
| PstNI | CAGNNNCTG | 2 cut(s) | 562, 581 |
| PsuI | RGATCY | 4 cut(s) | 681, 979, 1633, 2060 |
| RsaI | GTAC | 6 cut(s) | 255, 505, 746, 2015, 2101, 2255 |
| RsaNI | GTAC | 6 cut(s) | 254, 504, 745, 2014, 2100, 2254 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2052 |
| SacI | GAGCTC | 1 cut(s) | 1743 |
| SapI | GCTCTTC | 1 cut(s) | 1380 |
| SatI | GCNGC | 2 cut(s) | 1751, 1774 |
| Sau96I | GGNCC | 2 cut(s) | 811, 2268 |
| SchI | GAGTC | 4 cut(s) | 785, 1255, 1531, 1787 |
| ScrFI | CCNGG | 3 cut(s) | 516, 1618, 1825 |
| SduI | GDGCHC | 4 cut(s) | 516, 541, 1559, 1743 |
| SfaNI | GCATC | 8 cut(s) | 444, 648, 715, 1113, 1190, 1482, 2318, 2443 |
| SfcI | CTRYAG | 2 cut(s) | 880, 1784 |
| SfoI | GGCGCC | 1 cut(s) | 897 |
| SfuI | TTCGAA | 2 cut(s) | 871, 2471 |
| SinI | GGWCC | 2 cut(s) | 811, 2268 |
| SmiI | ATTTAAAT | 2 cut(s) | 1315, 1536 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2052 |
| SmlI | CTYRAG | 6 cut(s) | 677, 773, 890, 1280, 1519, 2448 |
| SmoI | CTYRAG | 6 cut(s) | 677, 773, 890, 1280, 1519, 2448 |
| SphI | GCATGC | 2 cut(s) | 77, 327 |
| SseBI | AGGCCT | 1 cut(s) | 2363 |
| SsiI | CCGC | 3 cut(s) | 1161, 1179, 1753 |
| SspDI | GGCGCC | 1 cut(s) | 895 |
| SspI | AATATT | 1 cut(s) | 1651 |
| SspMI | CTAG | 5 cut(s) | 243, 615, 1989, 2265, 2384 |
| SstI | GAGCTC | 1 cut(s) | 1743 |
| StuI | AGGCCT | 1 cut(s) | 2363 |
| StyD4I | CCNGG | 3 cut(s) | 514, 1616, 1823 |
| StyI | CCWWGG | 2 cut(s) | 1201, 2358 |
| SwaI | ATTTAAAT | 2 cut(s) | 1315, 1536 |
| TaaI | ACNGT | 3 cut(s) | 1097, 1481, 1792 |
| TaiI | ACGT | 7 cut(s) | 526, 606, 614, 1502, 1975, 2280, 2426 |
| TaqI | TCGA | 8 cut(s) | 376, 871, 942, 1400, 1726, 1846, 2136, 2471 |
| TaqII | GACCGA | 1 cut(s) | 828 |
| TatI | WGTACW | 2 cut(s) | 253, 744 |
| TfiI | GAWTC | 4 cut(s) | 350, 919, 1042, 2430 |
| TscAI | CASTG | 8 cut(s) | 194, 1100, 1199, 1303, 1752, 1788, 1899, 1915 |
| TseFI | GTSAC | 6 cut(s) | 1779, 1910, 2273, 2353, 2393, 2402 |
| TseI | GCWGC | 2 cut(s) | 1750, 1773 |
| Tsp45I | GTSAC | 6 cut(s) | 1779, 1910, 2273, 2353, 2393, 2402 |
| TspDTI | ATGAA | 6 cut(s) | 228, 710, 1038, 1073, 1386, 2040 |
| TspGWI | ACGGA | 4 cut(s) | 408, 521, 1054, 2226 |
| TspRI | CASTG | 8 cut(s) | 194, 1100, 1199, 1303, 1752, 1788, 1899, 1915 |
| VpaK11BI | GGWCC | 2 cut(s) | 811, 2268 |
| XceI | RCATGY | 2 cut(s) | 77, 327 |
| XmiI | GTMKAC | 1 cut(s) | 1249 |
| XmnI | GAANNNNTTC | 3 cut(s) | 54, 1041, 1452 |
| XspI | CTAG | 5 cut(s) | 243, 615, 1989, 2265, 2384 |
| Zsp2I | ATGCAT | 3 cut(s) | 75, 459, 599 |