TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 332, 696 |
| AatII | GACGTC | 1 cut(s) | 1493 |
| Acc36I | ACCTGC | 2 cut(s) | 1828, 1916 |
| AccB1I | GGYRCC | 1 cut(s) | 1656 |
| AccI | GTMKAC | 2 cut(s) | 1686, 2190 |
| AccII | CGCG | 1 cut(s) | 315 |
| AccIII | TCCGGA | 1 cut(s) | 2482 |
| AciI | CCGC | 9 cut(s) | 313, 315, 752, 1514, 1581, 1677, 1734, 2467, 2470 |
| AclWI | GGATC | 2 cut(s) | 208, 230 |
| AcsI | RAATTY | 6 cut(s) | 68, 281, 599, 615, 1445, 2554 |
| AcuI | CTGAAG | 3 cut(s) | 924, 1964, 2319 |
| AcyI | GRCGYC | 1 cut(s) | 1490 |
| AfaI | GTAC | 6 cut(s) | 961, 1216, 1454, 1510, 2234, 2258 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 197, 235, 358, 2044 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 190 |
| AhlI | ACTAGT | 1 cut(s) | 2425 |
| AjiI | CACGTC | 1 cut(s) | 1938 |
| AjnI | CCWGG | 2 cut(s) | 1265, 1652 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 267, 273, 299, 305 |
| AluBI | AGCT | 9 cut(s) | 77, 416, 521, 1261, 1278, 1838, 1897, 2095, 2399 |
| AluI | AGCT | 9 cut(s) | 77, 416, 521, 1261, 1278, 1838, 1897, 2095, 2399 |
| Alw21I | GWGCWC | 1 cut(s) | 1899 |
| Alw26I | GTCTC | 9 cut(s) | 459, 625, 1085, 1131, 1213, 1335, 1346, 1388, 1497 |
| AlwI | GGATC | 2 cut(s) | 208, 230 |
| Ama87I | CYCGRG | 1 cut(s) | 213 |
| Aor13HI | TCCGGA | 1 cut(s) | 2482 |
| AoxI | GGCC | 3 cut(s) | 237, 2412, 2436 |
| ApeKI | GCWGC | 5 cut(s) | 1029, 1233, 1371, 1838, 1909 |
| ApoI | RAATTY | 6 cut(s) | 68, 281, 599, 615, 1445, 2554 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 599, 615 |
| AspS9I | GGNCC | 3 cut(s) | 238, 536, 1585 |
| AsuHPI | GGTGA | 2 cut(s) | 305, 2291 |
| AsuII | TTCGAA | 2 cut(s) | 444, 1558 |
| AvaI | CYCGRG | 1 cut(s) | 213 |
| AvaII | GGWCC | 2 cut(s) | 536, 1585 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1791, 1824 |
| BanI | GGYRCC | 1 cut(s) | 1656 |
| BanII | GRGCYC | 1 cut(s) | 1899 |
| BbsI | GAAGAC | 2 cut(s) | 573, 1842 |
| Bbv12I | GWGCWC | 1 cut(s) | 1899 |
| BbvI | GCAGC | 5 cut(s) | 1016, 1220, 1383, 1825, 1896 |
| BccI | CCATC | 3 cut(s) | 697, 1581, 2307 |
| BceAI | ACGGC | 6 cut(s) | 213, 1246, 1300, 1831, 2021, 2427 |
| BciT130I | CCWGG | 2 cut(s) | 1267, 1654 |
| BciVI | GTATCC | 2 cut(s) | 2219, 2328 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BcoDI | GTCTC | 9 cut(s) | 459, 625, 1085, 1131, 1213, 1335, 1346, 1388, 1497 |
| BcuI | ACTAGT | 1 cut(s) | 2425 |
| BfaI | CTAG | 7 cut(s) | 278, 339, 812, 1130, 1283, 2271, 2426 |
| BfmI | CTRYAG | 1 cut(s) | 1612 |
| BfuAI | ACCTGC | 2 cut(s) | 1828, 1916 |
| BfuI | GTATCC | 2 cut(s) | 2219, 2328 |
| BglII | AGATCT | 3 cut(s) | 172, 946, 1567 |
| BisI | GCNGC | 7 cut(s) | 313, 1030, 1234, 1372, 1839, 1910, 2470 |
| BlpI | GCTNAGC | 1 cut(s) | 1842 |
| BlsI | GCNGC | 7 cut(s) | 314, 1031, 1235, 1373, 1840, 1911, 2471 |
| BmcAI | AGTACT | 1 cut(s) | 1454 |
| Bme1390I | CCNGG | 2 cut(s) | 1267, 1654 |
| Bme18I | GGWCC | 2 cut(s) | 536, 1585 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 190 |
| BmeT110I | CYCGRG | 1 cut(s) | 213 |
| BmgBI | CACGTC | 1 cut(s) | 1938 |
| BmgT120I | GGNCC | 3 cut(s) | 238, 536, 1585 |
| BmiI | GGNNCC | 9 cut(s) | 350, 537, 538, 863, 978, 1473, 1586, 1651, 1658 |
| BmrFI | CCNGG | 2 cut(s) | 1267, 1654 |
| BmrI | ACTGGG | 1 cut(s) | 580 |
| BmuI | ACTGGG | 1 cut(s) | 580 |
| BpiI | GAAGAC | 2 cut(s) | 573, 1842 |
| BpmI | CTGGAG | 1 cut(s) | 1490 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1842 |
| Bpu14I | TTCGAA | 2 cut(s) | 444, 1558 |
| BpuEI | CTTGAG | 7 cut(s) | 377, 956, 1193, 1436, 1610, 1901, 2030 |
| Bsa29I | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1572 |
| BsaHI | GRCGYC | 1 cut(s) | 1490 |
| BsaI | GGTCTC | 2 cut(s) | 1131, 1346 |
| BsaJI | CCNNGG | 5 cut(s) | 313, 1265, 1660, 2003, 2409 |
| BsaWI | WCCGGW | 3 cut(s) | 1211, 1802, 2482 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 197, 235, 358, 2044 |
| Bse1I | ACTGG | 3 cut(s) | 575, 1450, 1473 |
| Bse3DI | GCAATG | 4 cut(s) | 771, 1904, 1919, 2281 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1572 |
| BseAI | TCCGGA | 1 cut(s) | 2482 |
| BseBI | CCWGG | 2 cut(s) | 1267, 1654 |
| BseCI | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BseDI | CCNNGG | 5 cut(s) | 313, 1265, 1660, 2003, 2409 |
| BseGI | GGATG | 5 cut(s) | 708, 2039, 2053, 2255, 2299 |
| BseJI | GATNNNNATC | 1 cut(s) | 1572 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 197, 235, 358, 2044 |
| BseMI | GCAATG | 4 cut(s) | 771, 1904, 1919, 2281 |
| BseNI | ACTGG | 3 cut(s) | 575, 1450, 1473 |
| BseRI | GAGGAG | 2 cut(s) | 1989, 2027 |
| BseXI | GCAGC | 5 cut(s) | 1016, 1220, 1383, 1825, 1896 |
| BsgI | GTGCAG | 1 cut(s) | 1953 |
| Bsh1236I | CGCG | 1 cut(s) | 315 |
| BshFI | GGCC | 3 cut(s) | 239, 2414, 2438 |
| BshNI | GGYRCC | 1 cut(s) | 1656 |
| BshVI | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1899 |
| BsiHKCI | CYCGRG | 1 cut(s) | 213 |
| BsiSI | CCGG | 3 cut(s) | 1212, 1803, 2483 |
| BslFI | GGGAC | 6 cut(s) | 390, 522, 766, 1583, 1598, 2000 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 197, 235, 358, 2044 |
| BsmAI | GTCTC | 9 cut(s) | 459, 625, 1085, 1131, 1213, 1335, 1346, 1388, 1497 |
| BsmBI | CGTCTC | 1 cut(s) | 1497 |
| BsmFI | GGGAC | 6 cut(s) | 390, 522, 766, 1583, 1598, 2000 |
| BsmI | GAATGC | 3 cut(s) | 510, 1395, 2059 |
| BsnI | GGCC | 3 cut(s) | 239, 2414, 2438 |
| Bso31I | GGTCTC | 2 cut(s) | 1131, 1346 |
| BsoBI | CYCGRG | 1 cut(s) | 213 |
| Bsp119I | TTCGAA | 2 cut(s) | 444, 1558 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1899 |
| Bsp13I | TCCGGA | 1 cut(s) | 2482 |
| Bsp1407I | TGTACA | 1 cut(s) | 959 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1842 |
| BspACI | CCGC | 9 cut(s) | 313, 315, 752, 1514, 1581, 1677, 1734, 2467, 2470 |
| BspANI | GGCC | 3 cut(s) | 239, 2414, 2438 |
| BspDI | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BspEI | TCCGGA | 1 cut(s) | 2482 |
| BspFNI | CGCG | 1 cut(s) | 315 |
| BspLI | GGNNCC | 9 cut(s) | 350, 537, 538, 863, 978, 1473, 1586, 1651, 1658 |
| BspMI | ACCTGC | 2 cut(s) | 1828, 1916 |
| BspPI | GGATC | 2 cut(s) | 208, 230 |
| BspT104I | TTCGAA | 2 cut(s) | 444, 1558 |
| BspT107I | GGYRCC | 1 cut(s) | 1656 |
| BspTNI | GGTCTC | 2 cut(s) | 1131, 1346 |
| BsrDI | GCAATG | 4 cut(s) | 771, 1904, 1919, 2281 |
| BsrGI | TGTACA | 1 cut(s) | 959 |
| BsrI | ACTGG | 3 cut(s) | 575, 1450, 1473 |
| BssECI | CCNNGG | 5 cut(s) | 313, 1265, 1660, 2003, 2409 |
| BssNAI | GTATAC | 1 cut(s) | 2191 |
| BssNI | GRCGYC | 1 cut(s) | 1490 |
| BssT1I | CCWWGG | 1 cut(s) | 1660 |
| Bst1107I | GTATAC | 1 cut(s) | 2191 |
| Bst2UI | CCWGG | 2 cut(s) | 1267, 1654 |
| Bst4CI | ACNGT | 6 cut(s) | 743, 1193, 1607, 1616, 2222, 2316 |
| Bst6I | CTCTTC | 1 cut(s) | 1340 |
| BstACI | GRCGYC | 1 cut(s) | 1490 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 826 |
| BstAUI | TGTACA | 1 cut(s) | 959 |
| BstBI | TTCGAA | 2 cut(s) | 444, 1558 |
| BstC8I | GCNNGC | 4 cut(s) | 438, 893, 1825, 2209 |
| BstDSI | CCRYGG | 3 cut(s) | 313, 2003, 2409 |
| BstEII | GGTNACC | 1 cut(s) | 293 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 356 |
| BstF5I | GGATG | 5 cut(s) | 708, 2039, 2053, 2255, 2299 |
| BstFNI | CGCG | 1 cut(s) | 315 |
| BstMAI | GTCTC | 9 cut(s) | 459, 625, 1085, 1131, 1213, 1335, 1346, 1388, 1497 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 826, 1656, 2531 |
| BstNI | CCWGG | 2 cut(s) | 1267, 1654 |
| BstNSI | RCATGY | 1 cut(s) | 690 |
| BstPI | GGTNACC | 1 cut(s) | 293 |
| BstSCI | CCNGG | 2 cut(s) | 1265, 1652 |
| BstSFI | CTRYAG | 1 cut(s) | 1612 |
| BstUI | CGCG | 1 cut(s) | 315 |
| BstV1I | GCAGC | 5 cut(s) | 1016, 1220, 1383, 1825, 1896 |
| BstV2I | GAAGAC | 2 cut(s) | 573, 1842 |
| BstX2I | RGATCY | 3 cut(s) | 172, 946, 1567 |
| BstYI | RGATCY | 3 cut(s) | 172, 946, 1567 |
| BstZ17I | GTATAC | 1 cut(s) | 2191 |
| Bsu15I | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BsuI | GTATCC | 2 cut(s) | 2219, 2328 |
| BsuRI | GGCC | 3 cut(s) | 239, 2414, 2438 |
| BsuTUI | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| BtgI | CCRYGG | 3 cut(s) | 313, 2003, 2409 |
| BtrI | CACGTC | 1 cut(s) | 1938 |
| BtsCI | GGATG | 5 cut(s) | 708, 2039, 2053, 2255, 2299 |
| BtsI | GCAGTG | 1 cut(s) | 1576 |
| BtsIMutI | CAGTG | 4 cut(s) | 1576, 1940, 2430, 2453 |
| BveI | ACCTGC | 2 cut(s) | 1828, 1916 |
| Cac8I | GCNNGC | 4 cut(s) | 438, 893, 1825, 2209 |
| Cfr13I | GGNCC | 3 cut(s) | 238, 536, 1585 |
| Cfr42I | CCGCGG | 1 cut(s) | 316 |
| ClaI | ATCGAT | 3 cut(s) | 791, 876, 1535 |
| Csp6I | GTAC | 6 cut(s) | 960, 1215, 1453, 1509, 2233, 2257 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 471, 506 |
| CviAII | CATG | 7 cut(s) | 10, 119, 299, 687, 821, 1646, 2348 |
| CviQI | GTAC | 6 cut(s) | 960, 1215, 1453, 1509, 2233, 2257 |
| DraI | TTTAAA | 1 cut(s) | 2134 |
| DriI | GACNNNNNGTC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 1340 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 190 |
| EarI | CTCTTC | 1 cut(s) | 1340 |
| Ecl136II | GAGCTC | 1 cut(s) | 1897 |
| Eco130I | CCWWGG | 1 cut(s) | 1660 |
| Eco147I | AGGCCT | 1 cut(s) | 2438 |
| Eco24I | GRGCYC | 1 cut(s) | 1899 |
| Eco31I | GGTCTC | 2 cut(s) | 1131, 1346 |
| Eco47I | GGWCC | 2 cut(s) | 536, 1585 |
| Eco53kI | GAGCTC | 1 cut(s) | 1897 |
| Eco57I | CTGAAG | 3 cut(s) | 924, 1964, 2319 |
| Eco88I | CYCGRG | 1 cut(s) | 213 |
| Eco91I | GGTNACC | 1 cut(s) | 293 |
| EcoICRI | GAGCTC | 1 cut(s) | 1897 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 356 |
| EcoO109I | RGGNCCY | 3 cut(s) | 238, 536, 1585 |
| EcoO65I | GGTNACC | 1 cut(s) | 293 |
| EcoRII | CCWGG | 2 cut(s) | 1265, 1652 |
| EcoT14I | CCWWGG | 1 cut(s) | 1660 |
| EcoT22I | ATGCAT | 1 cut(s) | 822 |
| EcoT38I | GRGCYC | 1 cut(s) | 1899 |
| ErhI | CCWWGG | 1 cut(s) | 1660 |
| Esp3I | CGTCTC | 1 cut(s) | 1497 |
| FaeI | CATG | 7 cut(s) | 13, 122, 302, 690, 824, 1649, 2351 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2222, 2254, 2246, 2278 |
| FaqI | GGGAC | 6 cut(s) | 390, 522, 766, 1583, 1598, 2000 |
| FatI | CATG | 7 cut(s) | 9, 118, 298, 686, 820, 1645, 2347 |
| FauI | CCCGC | 2 cut(s) | 1574, 1684 |
| FauNDI | CATATG | 1 cut(s) | 2149 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| FblI | GTMKAC | 2 cut(s) | 1686, 2190 |
| Fnu4HI | GCNGC | 7 cut(s) | 313, 1030, 1234, 1372, 1839, 1910, 2470 |
| FokI | GGATG | 5 cut(s) | 715, 2046, 2060, 2262, 2286 |
| FriOI | GRGCYC | 1 cut(s) | 1899 |
| Fsp4HI | GCNGC | 7 cut(s) | 313, 1030, 1234, 1372, 1839, 1910, 2470 |
| FspBI | CTAG | 7 cut(s) | 278, 339, 812, 1130, 1283, 2271, 2426 |
| GluI | GCNGC | 7 cut(s) | 313, 1030, 1234, 1372, 1839, 1910, 2470 |
| GsuI | CTGGAG | 1 cut(s) | 1490 |
| HaeIII | GGCC | 3 cut(s) | 239, 2414, 2438 |
| HapII | CCGG | 3 cut(s) | 1212, 1803, 2483 |
| Hin1I | GRCGYC | 1 cut(s) | 1490 |
| Hin1II | CATG | 7 cut(s) | 13, 122, 302, 690, 824, 1649, 2351 |
| HincII | GTYRAC | 2 cut(s) | 1066, 2446 |
| HindII | GTYRAC | 2 cut(s) | 1066, 2446 |
| HindIII | AAGCTT | 1 cut(s) | 75 |
| HinfI | GANTC | 9 cut(s) | 1036, 1073, 1328, 1381, 1420, 1883, 2153, 2342, 2508 |
| HpaII | CCGG | 3 cut(s) | 1212, 1803, 2483 |
| HphI | GGTGA | 2 cut(s) | 305, 2291 |
| Hpy166II | GTNNAC | 5 cut(s) | 1066, 1625, 1687, 2191, 2446 |
| Hpy8I | GTNNAC | 5 cut(s) | 1066, 1625, 1687, 2191, 2446 |
| HpyAV | CCTTC | 6 cut(s) | 557, 990, 1122, 1385, 2187, 2425 |
| HpyCH4III | ACNGT | 6 cut(s) | 743, 1193, 1607, 1616, 2222, 2316 |
| HpyCH4IV | ACGT | 3 cut(s) | 1490, 1937, 1989 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 826, 1656, 2531 |
| HpySE526I | ACGT | 3 cut(s) | 1490, 1937, 1989 |
| Hsp92I | GRCGYC | 1 cut(s) | 1490 |
| Hsp92II | CATG | 7 cut(s) | 13, 122, 302, 690, 824, 1649, 2351 |
| KflI | GGGWCCC | 1 cut(s) | 536 |
| Kpn2I | TCCGGA | 1 cut(s) | 2482 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| KspI | CCGCGG | 1 cut(s) | 316 |
| LmnI | GCTCC | 7 cut(s) | 348, 1258, 1471, 1655, 1902, 2179, 2396 |
| Lsp1109I | GCAGC | 5 cut(s) | 1016, 1220, 1383, 1825, 1896 |
| MaeI | CTAG | 7 cut(s) | 278, 339, 812, 1130, 1283, 2271, 2426 |
| MaeII | ACGT | 3 cut(s) | 1490, 1937, 1989 |
| MaeIII | GTNAC | 6 cut(s) | 293, 638, 803, 884, 1938, 2428 |
| MflI | RGATCY | 3 cut(s) | 172, 946, 1567 |
| MhlI | GDGCHC | 1 cut(s) | 1899 |
| MlyI | GAGTC | 3 cut(s) | 1337, 1390, 1892 |
| MmeI | TCCRAC | 4 cut(s) | 2025, 2047, 2196, 2469 |
| Mph1103I | ATGCAT | 1 cut(s) | 822 |
| MroI | TCCGGA | 1 cut(s) | 2482 |
| MroXI | GAANNNNTTC | 2 cut(s) | 599, 615 |
| MspA1I | CMGCKG | 2 cut(s) | 315, 1514 |
| MspI | CCGG | 3 cut(s) | 1212, 1803, 2483 |
| MspR9I | CCNGG | 2 cut(s) | 1267, 1654 |
| Mva1269I | GAATGC | 3 cut(s) | 510, 1395, 2059 |
| MvaI | CCWGG | 2 cut(s) | 1267, 1654 |
| MvnI | CGCG | 1 cut(s) | 315 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 826, 1656, 2531 |
| NdeI | CATATG | 1 cut(s) | 2149 |
| NlaIII | CATG | 7 cut(s) | 13, 122, 302, 690, 824, 1649, 2351 |
| NlaIV | GGNNCC | 9 cut(s) | 350, 537, 538, 863, 978, 1473, 1586, 1651, 1658 |
| NmuCI | GTSAC | 3 cut(s) | 293, 1938, 2428 |
| NsiI | ATGCAT | 1 cut(s) | 822 |
| NspI | RCATGY | 1 cut(s) | 690 |
| NspV | TTCGAA | 2 cut(s) | 444, 1558 |
| PaeR7I | CTCGAG | 1 cut(s) | 213 |
| PceI | AGGCCT | 1 cut(s) | 2438 |
| PctI | GAATGC | 3 cut(s) | 510, 1395, 2059 |
| PdmI | GAANNNNTTC | 2 cut(s) | 599, 615 |
| PfeI | GAWTC | 6 cut(s) | 1036, 1073, 1420, 2153, 2342, 2508 |
| PflFI | GACNNNGTC | 1 cut(s) | 1691 |
| PkrI | GCNGC | 7 cut(s) | 314, 1031, 1235, 1373, 1840, 1911, 2471 |
| PleI | GAGTC | 3 cut(s) | 1336, 1389, 1891 |
| PpsI | GAGTC | 3 cut(s) | 1336, 1389, 1891 |
| PpuMI | RGGWCCY | 2 cut(s) | 536, 1585 |
| PsiI | TTATAA | 2 cut(s) | 332, 696 |
| Psp124BI | GAGCTC | 1 cut(s) | 1899 |
| Psp5II | RGGWCCY | 2 cut(s) | 536, 1585 |
| Psp6I | CCWGG | 2 cut(s) | 1265, 1652 |
| PspEI | GGTNACC | 1 cut(s) | 293 |
| PspGI | CCWGG | 2 cut(s) | 1265, 1652 |
| PspN4I | GGNNCC | 9 cut(s) | 350, 537, 538, 863, 978, 1473, 1586, 1651, 1658 |
| PspPI | GGNCC | 3 cut(s) | 238, 536, 1585 |
| PspPPI | RGGWCCY | 2 cut(s) | 536, 1585 |
| PsuI | RGATCY | 3 cut(s) | 172, 946, 1567 |
| PsyI | GACNNNGTC | 1 cut(s) | 1691 |
| RsaI | GTAC | 6 cut(s) | 961, 1216, 1454, 1510, 2234, 2258 |
| RsaNI | GTAC | 6 cut(s) | 960, 1215, 1453, 1509, 2233, 2257 |
| SacI | GAGCTC | 1 cut(s) | 1899 |
| SacII | CCGCGG | 1 cut(s) | 316 |
| SatI | GCNGC | 7 cut(s) | 313, 1030, 1234, 1372, 1839, 1910, 2470 |
| Sau96I | GGNCC | 3 cut(s) | 238, 536, 1585 |
| ScaI | AGTACT | 1 cut(s) | 1454 |
| SchI | GAGTC | 3 cut(s) | 1337, 1390, 1892 |
| ScrFI | CCNGG | 2 cut(s) | 1267, 1654 |
| SduI | GDGCHC | 1 cut(s) | 1899 |
| SfcI | CTRYAG | 1 cut(s) | 1612 |
| Sfr274I | CTCGAG | 1 cut(s) | 213 |
| Sfr303I | CCGCGG | 1 cut(s) | 316 |
| SfuI | TTCGAA | 2 cut(s) | 444, 1558 |
| SgrBI | CCGCGG | 1 cut(s) | 316 |
| SinI | GGWCC | 2 cut(s) | 536, 1585 |
| SlaI | CTCGAG | 1 cut(s) | 213 |
| SmlI | CTYRAG | 8 cut(s) | 213, 356, 935, 1172, 1415, 1589, 1880, 2009 |
| SmoI | CTYRAG | 8 cut(s) | 213, 356, 935, 1172, 1415, 1589, 1880, 2009 |
| SpeI | ACTAGT | 1 cut(s) | 2425 |
| SseBI | AGGCCT | 1 cut(s) | 2438 |
| SsiI | CCGC | 9 cut(s) | 313, 315, 752, 1514, 1581, 1677, 1734, 2467, 2470 |
| SspMI | CTAG | 7 cut(s) | 278, 339, 812, 1130, 1283, 2271, 2426 |
| SstI | GAGCTC | 1 cut(s) | 1899 |
| StuI | AGGCCT | 1 cut(s) | 2438 |
| StyD4I | CCNGG | 2 cut(s) | 1265, 1652 |
| StyI | CCWWGG | 1 cut(s) | 1660 |
| TaaI | ACNGT | 6 cut(s) | 743, 1193, 1607, 1616, 2222, 2316 |
| TaiI | ACGT | 3 cut(s) | 1493, 1940, 1992 |
| TaqI | TCGA | 9 cut(s) | 183, 214, 444, 678, 791, 876, 1535, 1558, 2241 |
| TaqII | GACCGA | 1 cut(s) | 1328 |
| TatI | WGTACW | 5 cut(s) | 959, 1452, 1508, 2232, 2256 |
| TauI | GCSGC | 2 cut(s) | 315, 2472 |
| TfiI | GAWTC | 6 cut(s) | 1036, 1073, 1420, 2153, 2342, 2508 |
| TscAI | CASTG | 4 cut(s) | 1583, 1947, 2437, 2460 |
| TseFI | GTSAC | 3 cut(s) | 293, 1938, 2428 |
| TseI | GCWGC | 5 cut(s) | 1029, 1233, 1371, 1838, 1909 |
| Tsp45I | GTSAC | 3 cut(s) | 293, 1938, 2428 |
| TspDTI | ATGAA | 3 cut(s) | 426, 1104, 1634 |
| TspGWI | ACGGA | 2 cut(s) | 180, 2310 |
| TspRI | CASTG | 4 cut(s) | 1583, 1947, 2437, 2460 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1691 |
| VpaK11BI | GGWCC | 2 cut(s) | 536, 1585 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 356 |
| XapI | RAATTY | 6 cut(s) | 68, 281, 599, 615, 1445, 2554 |
| XbaI | TCTAGA | 1 cut(s) | 1129 |
| XceI | RCATGY | 1 cut(s) | 690 |
| XhoI | CTCGAG | 1 cut(s) | 213 |
| XmiI | GTMKAC | 2 cut(s) | 1686, 2190 |
| XmnI | GAANNNNTTC | 2 cut(s) | 599, 615 |
| XspI | CTAG | 7 cut(s) | 278, 339, 812, 1130, 1283, 2271, 2426 |
| ZraI | GACGTC | 1 cut(s) | 1491 |
| ZrmI | AGTACT | 1 cut(s) | 1454 |
| Zsp2I | ATGCAT | 1 cut(s) | 822 |