RchiOBHm_Chr3g0451471
NBS-LRR Family

Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
2525226 .. 2527582
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41873

Sequence Viewer

Length: 2076 bp
ATGCCCAGCAGCAAACTCAAGAGACTTTGGAAAAAAGGCCAGAATCCTAAGAAATTGGAAAGGATCGATCTTAGTTACTCCAGGGACCTGGCAGATGTTGGAGAGCTGTCAAATAGTGTGTATATTGAGAGTATAAATCTTCAAGGCTGTAAAAGTTTGGTTCAAGTTCCGGATTTGTCGAAGTGCGTATACATTAAGAGTATAAATCTCCACGGCTGTGTAAGTTTGGTTCAAGTTCCAGACCTGTCAAAGAGTGTAAACATTGAGAGTATAAATCTTCAAAGCTGTGCAGATTTGGTTCAAGTTCCTTCATACTTTCAGAAGTTCACAAGGCTTACTCATCTGAGTTTGGGAGGTTGCTCTAAAATTAGTATTCTACCAAAGATACCAAGCAAGATGGAATTCTTAGATTTAAGTGAAACTGCAGTAGTAGAATTGCCTCCATCAATTTGGTCTCTTGAGAAACTTCTTGAATTGAATCTTGATTGCTGTAGCTCCATCGAGAATTTTTCGGGCAGTCCATGGAAGATGAAATCCCTCAATCATCTTTCCTTGAGCGAGACAAATATAGAAACAGTGCCCTCATCGTCATTCACGTGTATGACTGGGATCATTTCACTTGAGCTGAGAGATTGTCATCGCCTTGTCAGTCTCCCAACCGATATTTGTAAGTTGAAATCTCTTGAGAGGCTTGATCTCTCTGGTTGCTCTAGTTTCACAACATTTCCGGAAATTGCGGAGCCTATGAAGCATCTGCAGTATCTTAATTTAAGAGGGACAAAAATTGAAGAGCTGCCGTCATCGGTTGGGAATCTTGTTGGGCTCAAGAAATTAGATGTAACTGACTGCACAAGCCTTGAATTACTCCCAAATAGCTTCGACAATTTAAACCTTCTCGAGTGGTTCTCACTTGGAGGATGTGTCAAGCTAAAAAAATTGCCTCTCTCGTTCATTTTGTGCTCTTTGGTAAATCTAAACCTCGGAGGCTGCACATTGTTAGAAGAAATTCCCGATTGCTTTACTAGCTTTCCCGCATTGCAAGTGTTAGATCTAAGGGGCACCAGGATTGAGACCGTACCTCCCAGCATCAAACAAGTTTCAAGGCTCAAGCATCTGTTCCTAAATCGTTGCAAGCTGCTTCAATCTTTGCCAGTGCTTCCATGTCTTCTAGAAGAATTGGTCGCAGAAGGGTGCACGAGACTCGAGACTGTGTCAGTTTCAGTGACTGCACAGACACAATGTTTGGATCAAATACTTCCTGGGAAGAGGACCGAGAGACATACATACCCAGGTTGCGTTAATTTGGATGAAAATGCACGGAGCAACATAATGGATGATGCACGCTTCAGAATTATGCGAATGGCAACTGCTTGTAATCATGAACGTTTATCATCTGGTAAAGTAGAGTTCATGTGTCCGGGAAATGAAATTCCACAATGGTTTAGCTGTCAAACGGAGGGATCTTCAATGAATATTAAGCTTCCTCCGCATTGGTCTGATGATTCAAACTTCTTGGGTATTGCTCTCTGCTCTGTTTTTGCATTCAGTGGCAATTGTCATCATCTTGAGCCTCAATGTAGGATGATTGTCAAAAAGGACTCTGGTGAAACCCATATTGACAACTTGGGAAGTAGGGGGTGCTACGAGACTGATGACCCAACGGCTGAAACAGATCATGTGTCGGTGTGGTATTATCATACAGCCGGTGTAATTTCAGATGAAGCAAAATGGTCTACGGAAGCCTTTTTTGACTTCTATACAGAAAGCAAGCGTAAACCGTTAAATATCGTGAAACGGTGTGGGGTCTGCTTTCTGTATGACCAAGGCCAAGATGACGATGCTCTGAAATTTGAAGTCATTTGTCCACAGCAGCTTAGTGGTGAGTATGATTGGGGAAGTAGTGAGCGTGATTTGGTGAGAATGATTGGGGAGGCACTGAGTATGATTGGGGAATATGATTGGGGAAGTGAAACATATGGTGAGTATGACTGGGGAAGCGGTGAGTATGATAGTGGAATTGAACTTTCTCCCTTTTTTTTTTTTTGTTCATGTTCTTTTTTCTTAACTATTACATAA

Protein Analysis

691

Amino Acids

77.38

Weight (kDa)

5.2

Isoelectric Point (pI)

48.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_13 PF23286 225 - 406 3.8e-12 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 250 - 310 4e-09 Leucine-rich repeat region
C-JID PF20160 472 - 608 6.3e-16 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1058
AccI GTMKAC 2 cut(s) 189, 1733
AccIII TCCGGA 2 cut(s) 169, 727
AciI CCGC 4 cut(s) 737, 1032, 1487, 1998
AclI AACGTT 1 cut(s) 1384
AclWI GGATC 4 cut(s) 71, 617, 1254, 1468
AcsI RAATTY 5 cut(s) 401, 505, 1005, 1428, 1847
AcuI CTGAAG 1 cut(s) 1330
AcvI CACGTG 1 cut(s) 597
AfaI GTAC 1 cut(s) 1077
AflIII ACRYGT 1 cut(s) 596
AjnI CCWGG 5 cut(s) 80, 87, 1061, 1258, 1288
AleI CACNNNNGTG 1 cut(s) 216
Alw21I GWGCWC 2 cut(s) 962, 1196
Alw26I GTCTC 9 cut(s) 16, 459, 554, 656, 1064, 1192, 1199, 1270, 1640
Alw44I GTGCAC 1 cut(s) 1192
AlwI GGATC 4 cut(s) 71, 617, 1254, 1468
AlwNI CAGNNNCTG 1 cut(s) 1226
Ama87I CYCGRG 2 cut(s) 896, 1202
Aor13HI TCCGGA 2 cut(s) 169, 727
AoxI GGCC 2 cut(s) 37, 1825
ApaLI GTGCAC 1 cut(s) 1192
ApeKI GCWGC 5 cut(s) 9, 793, 987, 1135, 1870
ApoI RAATTY 5 cut(s) 401, 505, 1005, 1428, 1847
ArsI GACNNNNNNTTYG 2 cut(s) 1225, 1257
Asp700I GAANNNNTTC 1 cut(s) 1005
AspS9I GGNCC 2 cut(s) 85, 1269
AsuC2I CCSGG 1 cut(s) 1419
AsuHPI GGTGA 5 cut(s) 1616, 1892, 1927, 1991, 2012
AvaI CYCGRG 2 cut(s) 896, 1202
AvaII GGWCC 2 cut(s) 85, 1269
BaeGI GKGCMC 3 cut(s) 582, 1061, 1196
BanI GGYRCC 1 cut(s) 1058
BanII GRGCYC 1 cut(s) 825
BarI GAAGNNNNNNTAC 2 cut(s) 173, 205
BauI CACGAG 1 cut(s) 1195
BbrPI CACGTG 1 cut(s) 597
BbsI GAAGAC 1 cut(s) 1157
Bbv12I GWGCWC 2 cut(s) 962, 1196
BbvI GCAGC 5 cut(s) 21, 780, 974, 1122, 1882
BccI CCATC 3 cut(s) 391, 451, 506
BceAI ACGGC 3 cut(s) 229, 781, 1677
BcgI CGANNNNNNTGC 2 cut(s) 1183, 1217
BciT130I CCWGG 5 cut(s) 82, 89, 1063, 1260, 1290
BcnI CCSGG 1 cut(s) 1419
BcoDI GTCTC 9 cut(s) 16, 459, 554, 656, 1064, 1192, 1199, 1270, 1640
BfaI CTAG 3 cut(s) 711, 1023, 1169
BfmI CTRYAG 3 cut(s) 423, 490, 755
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 5 cut(s) 10, 794, 988, 1136, 1871
BlsI GCNGC 5 cut(s) 11, 795, 989, 1137, 1872
Bme1390I CCNGG 6 cut(s) 82, 89, 1063, 1260, 1290, 1419
Bme18I GGWCC 2 cut(s) 85, 1269
BmeT110I CYCGRG 2 cut(s) 896, 1202
BmgT120I GGNCC 2 cut(s) 85, 1269
BmiI GGNNCC 3 cut(s) 86, 741, 1060
BmrFI CCNGG 6 cut(s) 82, 89, 1063, 1260, 1290, 1419
BmrI ACTGGG 2 cut(s) 615, 1999
BmsI GCATC 5 cut(s) 760, 1095, 1120, 1327, 1828
BmuI ACTGGG 2 cut(s) 615, 1999
BpiI GAAGAC 1 cut(s) 1157
BplI GAGNNNNNCTC 2 cut(s) 890, 922
BpmI CTGGAG 1 cut(s) 64
BpuEI CTTGAG 7 cut(s) 479, 574, 641, 704, 809, 1091, 1586
BpuMI CCSGG 1 cut(s) 1419
Bsa29I ATCGAT 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 597
BsaBI GATNNNNATC 1 cut(s) 636
BsaI GGTCTC 2 cut(s) 459, 1064
BsaJI CCNNGG 7 cut(s) 81, 211, 521, 979, 1259, 1288, 1822
BsaWI WCCGGW 2 cut(s) 169, 727
BsaXI ACNNNNNCTCC 4 cut(s) 906, 936, 1063, 1093
Bse118I RCCGGY 1 cut(s) 1703
Bse1I ACTGG 3 cut(s) 610, 1151, 1994
Bse3DI GCAATG 1 cut(s) 1034
Bse8I GATNNNNATC 1 cut(s) 636
BseAI TCCGGA 2 cut(s) 169, 727
BseBI CCWGG 5 cut(s) 82, 89, 1063, 1260, 1290
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 7 cut(s) 81, 211, 521, 979, 1259, 1288, 1822
BseGI GGATG 4 cut(s) 923, 1312, 1339, 1587
BseJI GATNNNNATC 1 cut(s) 636
BseMI GCAATG 1 cut(s) 1034
BseMII CTCAG 3 cut(s) 335, 617, 1928
BseNI ACTGG 3 cut(s) 610, 1151, 1994
BseSI GKGCMC 3 cut(s) 582, 1061, 1196
BseXI GCAGC 5 cut(s) 21, 780, 974, 1122, 1882
BseYI CCCAGC 2 cut(s) 5, 1082
BsgI GTGCAG 4 cut(s) 309, 832, 973, 1212
BshFI GGCC 2 cut(s) 39, 1827
BshNI GGYRCC 1 cut(s) 1058
BshVI ATCGAT 1 cut(s) 66
BsiHKAI GWGCWC 2 cut(s) 962, 1196
BsiHKCI CYCGRG 2 cut(s) 896, 1202
BsiSI CCGG 4 cut(s) 170, 728, 1418, 1704
BslFI GGGAC 2 cut(s) 98, 790
BsmAI GTCTC 9 cut(s) 16, 459, 554, 656, 1064, 1192, 1199, 1270, 1640
BsmFI GGGAC 2 cut(s) 98, 790
BsmI GAATGC 1 cut(s) 1541
BsnI GGCC 2 cut(s) 39, 1827
Bso31I GGTCTC 2 cut(s) 459, 1064
BsoBI CYCGRG 2 cut(s) 896, 1202
Bsp1286I GDGCHC 5 cut(s) 582, 825, 962, 1061, 1196
Bsp13I TCCGGA 2 cut(s) 169, 727
Bsp143I GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
Bsp19I CCATGG 1 cut(s) 521
BspACI CCGC 4 cut(s) 737, 1032, 1487, 1998
BspANI GGCC 2 cut(s) 39, 1827
BspCNI CTCAG 3 cut(s) 336, 618, 1929
BspDI ATCGAT 1 cut(s) 66
BspEI TCCGGA 2 cut(s) 169, 727
BspHI TCATGA 1 cut(s) 1378
BspLI GGNNCC 3 cut(s) 86, 741, 1060
BspMAI CTGCAG 2 cut(s) 427, 759
BspPI GGATC 4 cut(s) 71, 617, 1254, 1468
BspQI GCTCTTC 1 cut(s) 783
BspT107I GGYRCC 1 cut(s) 1058
BspTNI GGTCTC 2 cut(s) 459, 1064
BsrDI GCAATG 1 cut(s) 1034
BsrFI RCCGGY 1 cut(s) 1703
BsrI ACTGG 3 cut(s) 610, 1151, 1994
BssAI RCCGGY 1 cut(s) 1703
BssECI CCNNGG 7 cut(s) 81, 211, 521, 979, 1259, 1288, 1822
BssMI GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
BssNAI GTATAC 1 cut(s) 190
BssSI CACGAG 1 cut(s) 1195
BssT1I CCWWGG 2 cut(s) 521, 1822
Bst1107I GTATAC 1 cut(s) 190
Bst2BI CACGAG 1 cut(s) 1195
Bst2UI CCWGG 5 cut(s) 82, 89, 1063, 1260, 1290
Bst4CI ACNGT 5 cut(s) 577, 1075, 1210, 1779, 1797
Bst6I CTCTTC 2 cut(s) 783, 1259
BstBAI YACGTR 1 cut(s) 597
BstC8I GCNNGC 3 cut(s) 1133, 1342, 1769
BstDEI CTNAG 8 cut(s) 48, 71, 344, 406, 626, 1052, 1874, 1937
BstDSI CCRYGG 2 cut(s) 211, 521
BstF5I GGATG 4 cut(s) 923, 1312, 1339, 1587
BstKTI GATC 8 cut(s) 66, 70, 612, 697, 1051, 1249, 1463, 1675
BstMAI GTCTC 9 cut(s) 16, 459, 554, 656, 1064, 1192, 1199, 1270, 1640
BstMBI GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
BstMWI GCNNNNNNNGC 3 cut(s) 748, 1023, 1486
BstNI CCWGG 5 cut(s) 82, 89, 1063, 1260, 1290
BstSCI CCNGG 6 cut(s) 80, 87, 1061, 1258, 1288, 1417
BstSFI CTRYAG 3 cut(s) 423, 490, 755
BstSLI GKGCMC 3 cut(s) 582, 1061, 1196
BstV1I GCAGC 5 cut(s) 21, 780, 974, 1122, 1882
BstV2I GAAGAC 1 cut(s) 1157
BstX2I RGATCY 2 cut(s) 1048, 1460
BstXI CCANNNNNNTGG 2 cut(s) 88, 450
BstYI RGATCY 2 cut(s) 1048, 1460
BstZ17I GTATAC 1 cut(s) 190
Bsu15I ATCGAT 1 cut(s) 66
BsuRI GGCC 2 cut(s) 39, 1827
BsuTUI ATCGAT 1 cut(s) 66
BtgI CCRYGG 2 cut(s) 211, 521
BtgZI GCGATG 1 cut(s) 623
BtsCI GGATG 4 cut(s) 923, 1312, 1339, 1587
BtsIMutI CAGTG 5 cut(s) 582, 1158, 1227, 1552, 1934
Cac8I GCNNGC 3 cut(s) 1133, 1342, 1769
CaiI CAGNNNCTG 1 cut(s) 1226
CciI TCATGA 1 cut(s) 1378
Cfr10I RCCGGY 1 cut(s) 1703
Cfr13I GGNCC 2 cut(s) 85, 1269
ClaI ATCGAT 1 cut(s) 66
Csp6I GTAC 1 cut(s) 1076
CviAII CATG 6 cut(s) 522, 1161, 1379, 1411, 1676, 2049
CviQI GTAC 1 cut(s) 1076
DdeI CTNAG 8 cut(s) 48, 71, 344, 406, 626, 1052, 1874, 1937
DpnI GATC 8 cut(s) 65, 69, 611, 696, 1050, 1248, 1462, 1674
DpnII GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
DraI TTTAAA 1 cut(s) 888
Eam1104I CTCTTC 2 cut(s) 783, 1259
EarI CTCTTC 2 cut(s) 783, 1259
Eco130I CCWWGG 2 cut(s) 521, 1822
Eco24I GRGCYC 1 cut(s) 825
Eco31I GGTCTC 2 cut(s) 459, 1064
Eco47I GGWCC 2 cut(s) 85, 1269
Eco57I CTGAAG 1 cut(s) 1330
Eco72I CACGTG 1 cut(s) 597
Eco88I CYCGRG 2 cut(s) 896, 1202
EcoO109I RGGNCCY 1 cut(s) 85
EcoRI GAATTC 1 cut(s) 401
EcoRII CCWGG 5 cut(s) 80, 87, 1061, 1258, 1288
EcoT14I CCWWGG 2 cut(s) 521, 1822
EcoT38I GRGCYC 1 cut(s) 825
ErhI CCWWGG 2 cut(s) 521, 1822
FaeI CATG 6 cut(s) 525, 1164, 1382, 1414, 1679, 2052
FaqI GGGAC 2 cut(s) 98, 790
FatI CATG 6 cut(s) 521, 1160, 1378, 1410, 1675, 2048
FauI CCCGC 1 cut(s) 1039
FauNDI CATATG 1 cut(s) 1975
FblI GTMKAC 2 cut(s) 189, 1733
Fnu4HI GCNGC 5 cut(s) 10, 794, 988, 1136, 1871
FokI GGATG 4 cut(s) 930, 1319, 1346, 1594
FriOI GRGCYC 1 cut(s) 825
Fsp4HI GCNGC 5 cut(s) 10, 794, 988, 1136, 1871
FspBI CTAG 3 cut(s) 711, 1023, 1169
GluI GCNGC 5 cut(s) 10, 794, 988, 1136, 1871
GsaI CCCAGC 2 cut(s) 9, 1086
GsuI CTGGAG 1 cut(s) 64
HaeIII GGCC 2 cut(s) 39, 1827
HapII CCGG 4 cut(s) 170, 728, 1418, 1704
Hin1II CATG 6 cut(s) 525, 1164, 1382, 1414, 1679, 2052
HindIII AAGCTT 1 cut(s) 1478
HinfI GANTC 6 cut(s) 43, 478, 811, 1200, 1502, 1598
HpaII CCGG 4 cut(s) 170, 728, 1418, 1704
HphI GGTGA 5 cut(s) 1616, 1892, 1927, 1991, 2012
Hpy166II GTNNAC 7 cut(s) 190, 259, 327, 1194, 1734, 1775, 1865
Hpy188I TCNGA 7 cut(s) 321, 345, 983, 1349, 1498, 1717, 1845
Hpy8I GTNNAC 7 cut(s) 190, 259, 327, 1194, 1734, 1775, 1865
HpyAV CCTTC 3 cut(s) 318, 902, 1181
HpyCH4III ACNGT 5 cut(s) 577, 1075, 1210, 1779, 1797
HpyCH4IV ACGT 2 cut(s) 596, 1384
HpyF10VI GCNNNNNNNGC 3 cut(s) 748, 1023, 1486
HpyF3I CTNAG 8 cut(s) 48, 71, 344, 406, 626, 1052, 1874, 1937
HpySE526I ACGT 2 cut(s) 596, 1384
Hsp92II CATG 6 cut(s) 525, 1164, 1382, 1414, 1679, 2052
Kpn2I TCCGGA 2 cut(s) 169, 727
Kzo9I GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
LguI GCTCTTC 1 cut(s) 783
LmnI GCTCC 3 cut(s) 500, 739, 1320
Lsp1109I GCAGC 5 cut(s) 21, 780, 974, 1122, 1882
LweI GCATC 5 cut(s) 760, 1095, 1120, 1327, 1828
MaeI CTAG 3 cut(s) 711, 1023, 1169
MaeII ACGT 2 cut(s) 596, 1384
MaeIII GTNAC 3 cut(s) 74, 838, 1222
MalI GATC 8 cut(s) 65, 69, 611, 696, 1050, 1248, 1462, 1674
MboI GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
MboII GAAGA 9 cut(s) 131, 269, 538, 800, 1013, 1157, 1184, 1276, 1455
MfeI CAATTG 1 cut(s) 1552
MflI RGATCY 2 cut(s) 1048, 1460
MhlI GDGCHC 5 cut(s) 582, 825, 962, 1061, 1196
MlyI GAGTC 2 cut(s) 1194, 1592
MmeI TCCRAC 1 cut(s) 79
MroI TCCGGA 2 cut(s) 169, 727
MroXI GAANNNNTTC 1 cut(s) 1005
MseI TTAA 9 cut(s) 195, 413, 765, 770, 887, 1299, 1476, 1781, 2063
MslI CAYNNNNRTG 3 cut(s) 216, 595, 599
MspI CCGG 4 cut(s) 170, 728, 1418, 1704
MspR9I CCNGG 6 cut(s) 82, 89, 1063, 1260, 1290, 1419
MunI CAATTG 1 cut(s) 1552
Mva1269I GAATGC 1 cut(s) 1541
MvaI CCWGG 5 cut(s) 82, 89, 1063, 1260, 1290
MwoI GCNNNNNNNGC 3 cut(s) 748, 1023, 1486
NciI CCSGG 1 cut(s) 1419
NcoI CCATGG 1 cut(s) 521
NdeI CATATG 1 cut(s) 1975
NdeII GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
NlaIII CATG 6 cut(s) 525, 1164, 1382, 1414, 1679, 2052
NlaIV GGNNCC 3 cut(s) 86, 741, 1060
NmuCI GTSAC 1 cut(s) 1222
OliI CACNNNNGTG 1 cut(s) 216
PaeR7I CTCGAG 2 cut(s) 896, 1202
PagI TCATGA 1 cut(s) 1378
PciSI GCTCTTC 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 593
PctI GAATGC 1 cut(s) 1541
PdmI GAANNNNTTC 1 cut(s) 1005
PfeI GAWTC 4 cut(s) 43, 478, 811, 1502
PflFI GACNNNGTC 1 cut(s) 1210
PfoI TCCNGGA 1 cut(s) 1417
PkrI GCNGC 5 cut(s) 11, 795, 989, 1137, 1872
PleI GAGTC 2 cut(s) 1194, 1592
PmaCI CACGTG 1 cut(s) 597
PmlI CACGTG 1 cut(s) 597
PpsI GAGTC 2 cut(s) 1194, 1592
Ppu21I YACGTR 1 cut(s) 597
PpuMI RGGWCCY 1 cut(s) 85
Psp1406I AACGTT 1 cut(s) 1384
Psp5II RGGWCCY 1 cut(s) 85
Psp6I CCWGG 5 cut(s) 80, 87, 1061, 1258, 1288
PspCI CACGTG 1 cut(s) 597
PspFI CCCAGC 2 cut(s) 5, 1082
PspGI CCWGG 5 cut(s) 80, 87, 1061, 1258, 1288
PspN4I GGNNCC 3 cut(s) 86, 741, 1060
PspPI GGNCC 2 cut(s) 85, 1269
PspPPI RGGWCCY 1 cut(s) 85
PsrI GAACNNNNNNTAC 2 cut(s) 213, 245
PstI CTGCAG 2 cut(s) 427, 759
PstNI CAGNNNCTG 1 cut(s) 1226
PsuI RGATCY 2 cut(s) 1048, 1460
PsyI GACNNNGTC 1 cut(s) 1210
RsaI GTAC 1 cut(s) 1077
RsaNI GTAC 1 cut(s) 1076
RseI CAYNNNNRTG 3 cut(s) 216, 595, 599
SapI GCTCTTC 1 cut(s) 783
SaqAI TTAA 9 cut(s) 195, 413, 765, 770, 887, 1299, 1476, 1781, 2063
SatI GCNGC 5 cut(s) 10, 794, 988, 1136, 1871
Sau3AI GATC 8 cut(s) 63, 67, 609, 694, 1048, 1246, 1460, 1672
Sau96I GGNCC 2 cut(s) 85, 1269
SchI GAGTC 2 cut(s) 1194, 1592
ScrFI CCNGG 6 cut(s) 82, 89, 1063, 1260, 1290, 1419
SduI GDGCHC 5 cut(s) 582, 825, 962, 1061, 1196
SfaNI GCATC 5 cut(s) 760, 1095, 1120, 1327, 1828
SfcI CTRYAG 3 cut(s) 423, 490, 755
Sfr274I CTCGAG 2 cut(s) 896, 1202
SinI GGWCC 2 cut(s) 85, 1269
SlaI CTCGAG 2 cut(s) 896, 1202
SmiMI CAYNNNNRTG 3 cut(s) 216, 595, 599
SsiI CCGC 4 cut(s) 737, 1032, 1487, 1998
SspI AATATT 1 cut(s) 1474
SspMI CTAG 3 cut(s) 711, 1023, 1169
StyD4I CCNGG 6 cut(s) 80, 87, 1061, 1258, 1288, 1417
StyI CCWWGG 2 cut(s) 521, 1822
TaaI ACNGT 5 cut(s) 577, 1075, 1210, 1779, 1797
TaiI ACGT 2 cut(s) 599, 1387
TaqI TCGA 6 cut(s) 66, 179, 501, 879, 897, 1203
TaqII GACCGA 1 cut(s) 1286
TfiI GAWTC 4 cut(s) 43, 478, 811, 1502
Tru1I TTAA 9 cut(s) 195, 413, 765, 770, 887, 1299, 1476, 1781, 2063
Tru9I TTAA 9 cut(s) 195, 413, 765, 770, 887, 1299, 1476, 1781, 2063
TscAI CASTG 5 cut(s) 582, 1158, 1227, 1552, 1941
TseFI GTSAC 1 cut(s) 1222
TseI GCWGC 5 cut(s) 9, 793, 987, 1135, 1870
Tsp45I GTSAC 1 cut(s) 1222
TspGWI ACGGA 3 cut(s) 1333, 1469, 1751
TspRI CASTG 5 cut(s) 582, 1158, 1227, 1552, 1941
Tth111I GACNNNGTC 1 cut(s) 1210
VneI GTGCAC 1 cut(s) 1192
VpaK11BI GGWCC 2 cut(s) 85, 1269
XapI RAATTY 5 cut(s) 401, 505, 1005, 1428, 1847
XbaI TCTAGA 1 cut(s) 1168
XhoI CTCGAG 2 cut(s) 896, 1202
XmiI GTMKAC 2 cut(s) 189, 1733
XmnI GAANNNNTTC 1 cut(s) 1005
XspI CTAG 3 cut(s) 711, 1023, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.