Toll - interleukin 1 - resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 62 - 242 | 1.1e-56 | TIR domain |
| TIR_2 | PF13676 | 65 - 174 | 1e-15 | TIR domain |
| NB-ARC | PF00931 | 244 - 411 | 7.2e-21 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 480 - 554 | 6.1e-15 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 840 - 923 | 4e-06 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 943 - 1046 | 4.7e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 1128 - 1260 | 1.9e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1476 |
| Acc16I | TGCGCA | 2 cut(s) | 566, 1443 |
| AccI | GTMKAC | 3 cut(s) | 98, 1512, 3629 |
| AccII | CGCG | 1 cut(s) | 3585 |
| AciI | CCGC | 6 cut(s) | 733, 1263, 1544, 2784, 2949, 3317 |
| AclI | AACGTT | 1 cut(s) | 538 |
| AclWI | GGATC | 4 cut(s) | 1809, 2145, 3397, 3839 |
| AcoI | YGGCCR | 1 cut(s) | 1519 |
| AcuI | CTGAAG | 6 cut(s) | 317, 1725, 3176, 3570, 3591, 3870 |
| AdeI | CACNNNGTG | 2 cut(s) | 396, 1798 |
| AfaI | GTAC | 8 cut(s) | 456, 1009, 1131, 1500, 1629, 2766, 2931, 3414 |
| AflII | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| AflIII | ACRYGT | 2 cut(s) | 1869, 3531 |
| AjnI | CCWGG | 6 cut(s) | 301, 714, 1786, 1934, 2251, 2456 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1545, 1577 |
| Alw21I | GWGCWC | 4 cut(s) | 1370, 2067, 2133, 3114 |
| AlwI | GGATC | 4 cut(s) | 1809, 2145, 3397, 3839 |
| Ama87I | CYCGRG | 2 cut(s) | 2110, 2966 |
| AoxI | GGCC | 6 cut(s) | 442, 639, 712, 1519, 1784, 2038 |
| ApeKI | GCWGC | 9 cut(s) | 119, 251, 593, 2424, 2427, 3084, 3144, 3270, 3827 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 269, 1395, 1749, 2238, 3213 |
| AspLEI | GCGC | 3 cut(s) | 567, 1444, 3585 |
| AspS9I | GGNCC | 4 cut(s) | 317, 1773, 1784, 3663 |
| AsuC2I | CCSGG | 2 cut(s) | 1677, 3387 |
| AsuHPI | GGTGA | 6 cut(s) | 224, 370, 2480, 2530, 3266, 3854 |
| AsuII | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| AvaI | CYCGRG | 2 cut(s) | 2110, 2966 |
| AvaII | GGWCC | 3 cut(s) | 317, 1773, 3663 |
| AxyI | CCTNAGG | 1 cut(s) | 2802 |
| BaeGI | GKGCMC | 1 cut(s) | 1794 |
| BalI | TGGCCA | 1 cut(s) | 1521 |
| BanII | GRGCYC | 4 cut(s) | 1677, 3001, 3114, 3366 |
| BauI | CACGAG | 1 cut(s) | 3088 |
| BbsI | GAAGAC | 4 cut(s) | 378, 3122, 3164, 3348 |
| Bbv12I | GWGCWC | 4 cut(s) | 1370, 2067, 2133, 3114 |
| BbvCI | CCTCAGC | 1 cut(s) | 2892 |
| BbvI | GCAGC | 9 cut(s) | 106, 238, 605, 2411, 2414, 3071, 3131, 3282, 3839 |
| BceAI | ACGGC | 2 cut(s) | 990, 2287 |
| BciT130I | CCWGG | 6 cut(s) | 303, 716, 1788, 1936, 2253, 2458 |
| BcnI | CCSGG | 2 cut(s) | 1677, 3387 |
| BfaI | CTAG | 2 cut(s) | 1239, 2768 |
| BfmI | CTRYAG | 6 cut(s) | 591, 789, 972, 1084, 1875, 3825 |
| BfrI | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| BglII | AGATCT | 1 cut(s) | 954 |
| BlpI | GCTNAGC | 2 cut(s) | 1001, 2690 |
| BmcAI | AGTACT | 2 cut(s) | 2766, 2931 |
| Bme1390I | CCNGG | 8 cut(s) | 303, 716, 1677, 1788, 1936, 2253, 2458, 3387 |
| Bme18I | GGWCC | 3 cut(s) | 317, 1773, 3663 |
| BmeT110I | CYCGRG | 2 cut(s) | 2110, 2966 |
| BmgT120I | GGNCC | 4 cut(s) | 317, 1773, 1784, 3663 |
| BmiI | GGNNCC | 4 cut(s) | 319, 1318, 2851, 3016 |
| BmrFI | CCNGG | 8 cut(s) | 303, 716, 1677, 1788, 1936, 2253, 2458, 3387 |
| BpiI | GAAGAC | 4 cut(s) | 378, 3122, 3164, 3348 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 984, 1016, 2513, 2545 |
| BpmI | CTGGAG | 3 cut(s) | 1066, 1089, 1305 |
| Bpu10I | CCTNAGC | 2 cut(s) | 834, 2892 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1001, 2690 |
| Bpu14I | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| BpuEI | CTTGAG | 3 cut(s) | 2630, 2857, 3022 |
| BpuMI | CCSGG | 2 cut(s) | 1677, 3387 |
| Bsa29I | ATCGAT | 1 cut(s) | 1586 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1713 |
| BsaI | GGTCTC | 4 cut(s) | 1581, 2322, 2487, 3700 |
| BsaJI | CCNNGG | 7 cut(s) | 1787, 2337, 2456, 2457, 2582, 2967, 3245 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2288, 2318, 2578, 2608, 3096, 3126 |
| Bse1I | ACTGG | 7 cut(s) | 1049, 1302, 2632, 2740, 2905, 3665, 3855 |
| Bse21I | CCTNAGG | 1 cut(s) | 2802 |
| Bse3DI | GCAATG | 1 cut(s) | 895 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1713 |
| BseBI | CCWGG | 6 cut(s) | 303, 716, 1788, 1936, 2253, 2458 |
| BseCI | ATCGAT | 1 cut(s) | 1586 |
| BseDI | CCNNGG | 7 cut(s) | 1787, 2337, 2456, 2457, 2582, 2967, 3245 |
| BseGI | GGATG | 4 cut(s) | 1501, 1949, 2038, 2153 |
| BseJI | GATNNNNATC | 1 cut(s) | 1713 |
| BseMI | GCAATG | 1 cut(s) | 895 |
| BseNI | ACTGG | 7 cut(s) | 1049, 1302, 2632, 2740, 2905, 3665, 3855 |
| BseRI | GAGGAG | 2 cut(s) | 2128, 2880 |
| BseSI | GKGCMC | 1 cut(s) | 1794 |
| BseXI | GCAGC | 9 cut(s) | 106, 238, 605, 2411, 2414, 3071, 3131, 3282, 3839 |
| BsgI | GTGCAG | 3 cut(s) | 1827, 2079, 3070 |
| Bsh1236I | CGCG | 1 cut(s) | 3585 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3682 |
| BshFI | GGCC | 6 cut(s) | 444, 641, 714, 1521, 1786, 2040 |
| BshVI | ATCGAT | 1 cut(s) | 1586 |
| BsiEI | CGRYCG | 1 cut(s) | 3682 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1370, 2067, 2133, 3114 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2110, 2966 |
| BsiSI | CCGG | 2 cut(s) | 1677, 3386 |
| BslFI | GGGAC | 1 cut(s) | 67 |
| BsmBI | CGTCTC | 3 cut(s) | 300, 2234, 2531 |
| BsmFI | GGGAC | 1 cut(s) | 67 |
| BsmI | GAATGC | 1 cut(s) | 1290 |
| BsnI | GGCC | 6 cut(s) | 444, 641, 714, 1521, 1786, 2040 |
| Bso31I | GGTCTC | 4 cut(s) | 1581, 2322, 2487, 3700 |
| BsoBI | CYCGRG | 2 cut(s) | 2110, 2966 |
| Bsp119I | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1370, 1677, 1794, 2067, 2133, 3001, 3114, 3366 |
| Bsp1407I | TGTACA | 1 cut(s) | 1498 |
| Bsp143I | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1001, 2690 |
| BspACI | CCGC | 6 cut(s) | 733, 1263, 1544, 2784, 2949, 3317 |
| BspANI | GGCC | 6 cut(s) | 444, 641, 714, 1521, 1786, 2040 |
| BspDI | ATCGAT | 1 cut(s) | 1586 |
| BspFNI | CGCG | 1 cut(s) | 3585 |
| BspHI | TCATGA | 3 cut(s) | 1134, 2320, 3730 |
| BspLI | GGNNCC | 4 cut(s) | 319, 1318, 2851, 3016 |
| BspMAI | CTGCAG | 2 cut(s) | 595, 3829 |
| BspPI | GGATC | 4 cut(s) | 1809, 2145, 3397, 3839 |
| BspQI | GCTCTTC | 2 cut(s) | 1203, 1665 |
| BspT104I | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| BspTI | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| BspTNI | GGTCTC | 4 cut(s) | 1581, 2322, 2487, 3700 |
| BsrDI | GCAATG | 1 cut(s) | 895 |
| BsrGI | TGTACA | 1 cut(s) | 1498 |
| BsrI | ACTGG | 7 cut(s) | 1049, 1302, 2632, 2740, 2905, 3665, 3855 |
| BssECI | CCNNGG | 7 cut(s) | 1787, 2337, 2456, 2457, 2582, 2967, 3245 |
| BssMI | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| BssNAI | GTATAC | 1 cut(s) | 3630 |
| BssSI | CACGAG | 1 cut(s) | 3088 |
| BssT1I | CCWWGG | 2 cut(s) | 2337, 3245 |
| Bst1107I | GTATAC | 1 cut(s) | 3630 |
| Bst2BI | CACGAG | 1 cut(s) | 3088 |
| Bst2UI | CCWGG | 6 cut(s) | 303, 716, 1788, 1936, 2253, 2458 |
| Bst4CI | ACNGT | 6 cut(s) | 551, 790, 969, 2705, 3163, 3683 |
| BstAFI | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2385 |
| BstAUI | TGTACA | 1 cut(s) | 1498 |
| BstBI | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| BstC8I | GCNNGC | 4 cut(s) | 1468, 2225, 2390, 3825 |
| BstDSI | CCRYGG | 1 cut(s) | 2582 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 833, 1768 |
| BstF5I | GGATG | 4 cut(s) | 1501, 1949, 2038, 2153 |
| BstFNI | CGCG | 1 cut(s) | 3585 |
| BstHHI | GCGC | 3 cut(s) | 567, 1444, 3585 |
| BstKTI | GATC | 9 cut(s) | 80, 957, 1804, 2140, 2212, 2623, 3392, 3730, 3847 |
| BstMBI | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| BstMCI | CGRYCG | 1 cut(s) | 3682 |
| BstNI | CCWGG | 6 cut(s) | 303, 716, 1788, 1936, 2253, 2458 |
| BstNSI | RCATGY | 4 cut(s) | 70, 1470, 1873, 3535 |
| BstSCI | CCNGG | 8 cut(s) | 301, 714, 1675, 1786, 1934, 2251, 2456, 3385 |
| BstSFI | CTRYAG | 6 cut(s) | 591, 789, 972, 1084, 1875, 3825 |
| BstSLI | GKGCMC | 1 cut(s) | 1794 |
| BstUI | CGCG | 1 cut(s) | 3585 |
| BstV1I | GCAGC | 9 cut(s) | 106, 238, 605, 2411, 2414, 3071, 3131, 3282, 3839 |
| BstV2I | GAAGAC | 4 cut(s) | 378, 3122, 3164, 3348 |
| BstX2I | RGATCY | 3 cut(s) | 954, 2137, 3389 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1529 |
| BstYI | RGATCY | 3 cut(s) | 954, 2137, 3389 |
| BstZ17I | GTATAC | 1 cut(s) | 3630 |
| Bsu15I | ATCGAT | 1 cut(s) | 1586 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2802 |
| BsuRI | GGCC | 6 cut(s) | 444, 641, 714, 1521, 1786, 2040 |
| BsuTUI | ATCGAT | 1 cut(s) | 1586 |
| BtgI | CCRYGG | 1 cut(s) | 2582 |
| BtgZI | GCGATG | 5 cut(s) | 28, 1104, 3600, 3906, 3933 |
| BtsCI | GGATG | 4 cut(s) | 1501, 1949, 2038, 2153 |
| BtsI | GCAGTG | 1 cut(s) | 2290 |
| BtsIMutI | CAGTG | 8 cut(s) | 786, 1295, 1370, 2290, 2625, 3152, 3168, 3862 |
| Cac8I | GCNNGC | 4 cut(s) | 1468, 2225, 2390, 3825 |
| CciI | TCATGA | 3 cut(s) | 1134, 2320, 3730 |
| CfoI | GCGC | 3 cut(s) | 567, 1444, 3585 |
| Cfr13I | GGNCC | 4 cut(s) | 317, 1773, 1784, 3663 |
| ClaI | ATCGAT | 1 cut(s) | 1586 |
| CseI | GACGC | 3 cut(s) | 372, 2216, 2513 |
| Csp6I | GTAC | 8 cut(s) | 455, 1008, 1130, 1499, 1628, 2765, 2930, 3413 |
| CviQI | GTAC | 8 cut(s) | 455, 1008, 1130, 1499, 1628, 2765, 2930, 3413 |
| DpnI | GATC | 9 cut(s) | 79, 956, 1803, 2139, 2211, 2622, 3391, 3729, 3846 |
| DpnII | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| DraI | TTTAAA | 3 cut(s) | 1183, 1816, 2182 |
| DraIII | CACNNNGTG | 2 cut(s) | 396, 1798 |
| EaeI | YGGCCR | 1 cut(s) | 1519 |
| Ecl136II | GAGCTC | 1 cut(s) | 3112 |
| Eco130I | CCWWGG | 2 cut(s) | 2337, 3245 |
| Eco24I | GRGCYC | 4 cut(s) | 1677, 3001, 3114, 3366 |
| Eco31I | GGTCTC | 4 cut(s) | 1581, 2322, 2487, 3700 |
| Eco47I | GGWCC | 3 cut(s) | 317, 1773, 3663 |
| Eco53kI | GAGCTC | 1 cut(s) | 3112 |
| Eco57I | CTGAAG | 6 cut(s) | 317, 1725, 3176, 3570, 3591, 3870 |
| Eco81I | CCTNAGG | 1 cut(s) | 2802 |
| Eco88I | CYCGRG | 2 cut(s) | 2110, 2966 |
| EcoICRI | GAGCTC | 1 cut(s) | 3112 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 833, 1768 |
| EcoRI | GAATTC | 2 cut(s) | 723, 2264 |
| EcoRII | CCWGG | 6 cut(s) | 301, 714, 1786, 1934, 2251, 2456 |
| EcoT14I | CCWWGG | 2 cut(s) | 2337, 3245 |
| EcoT22I | ATGCAT | 3 cut(s) | 520, 1530, 1620 |
| EcoT38I | GRGCYC | 4 cut(s) | 1677, 3001, 3114, 3366 |
| ErhI | CCWWGG | 2 cut(s) | 2337, 3245 |
| Esp3I | CGTCTC | 3 cut(s) | 300, 2234, 2531 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2368, 2400, 3210, 3242 |
| FaqI | GGGAC | 1 cut(s) | 67 |
| FauNDI | CATATG | 2 cut(s) | 700, 2001 |
| FblI | GTMKAC | 3 cut(s) | 98, 1512, 3629 |
| FokI | GGATG | 4 cut(s) | 1508, 1956, 2045, 2160 |
| FriOI | GRGCYC | 4 cut(s) | 1677, 3001, 3114, 3366 |
| FspBI | CTAG | 2 cut(s) | 1239, 2768 |
| FspI | TGCGCA | 2 cut(s) | 566, 1443 |
| GlaI | GCGC | 3 cut(s) | 566, 1443, 3584 |
| GsuI | CTGGAG | 3 cut(s) | 1066, 1089, 1305 |
| HaeIII | GGCC | 6 cut(s) | 444, 641, 714, 1521, 1786, 2040 |
| HapII | CCGG | 2 cut(s) | 1677, 3386 |
| HgaI | GACGC | 3 cut(s) | 372, 2216, 2513 |
| HhaI | GCGC | 3 cut(s) | 567, 1444, 3585 |
| Hin6I | GCGC | 3 cut(s) | 565, 1442, 3583 |
| HinP1I | GCGC | 3 cut(s) | 565, 1442, 3583 |
| HincII | GTYRAC | 1 cut(s) | 99 |
| HindII | GTYRAC | 1 cut(s) | 99 |
| HindIII | AAGCTT | 3 cut(s) | 579, 870, 3051 |
| HpaII | CCGG | 2 cut(s) | 1677, 3386 |
| HphI | GGTGA | 6 cut(s) | 224, 370, 2480, 2530, 3266, 3854 |
| Hpy166II | GTNNAC | 6 cut(s) | 99, 407, 1513, 3537, 3630, 3703 |
| Hpy8I | GTNNAC | 6 cut(s) | 99, 407, 1513, 3537, 3630, 3703 |
| Hpy99I | CGWCG | 2 cut(s) | 100, 3950 |
| HpyAV | CCTTC | 6 cut(s) | 1231, 1933, 2840, 3005, 3464, 3615 |
| HpyCH4III | ACNGT | 6 cut(s) | 551, 790, 969, 2705, 3163, 3683 |
| HpyCH4IV | ACGT | 7 cut(s) | 95, 538, 688, 1406, 1449, 1684, 1797 |
| HpySE526I | ACGT | 7 cut(s) | 95, 538, 688, 1406, 1449, 1684, 1797 |
| HspAI | GCGC | 3 cut(s) | 565, 1442, 3583 |
| Kzo9I | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| LguI | GCTCTTC | 2 cut(s) | 1203, 1665 |
| Lsp1109I | GCAGC | 9 cut(s) | 106, 238, 605, 2411, 2414, 3071, 3131, 3282, 3839 |
| MaeI | CTAG | 2 cut(s) | 1239, 2768 |
| MaeII | ACGT | 7 cut(s) | 95, 538, 688, 1406, 1449, 1684, 1797 |
| MaeIII | GTNAC | 8 cut(s) | 1040, 1108, 2017, 2699, 3150, 3442, 3499, 3685 |
| MalI | GATC | 9 cut(s) | 79, 956, 1803, 2139, 2211, 2622, 3391, 3729, 3846 |
| MboI | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| MfeI | CAATTG | 2 cut(s) | 1647, 3574 |
| MflI | RGATCY | 3 cut(s) | 954, 2137, 3389 |
| MhlI | GDGCHC | 8 cut(s) | 1370, 1677, 1794, 2067, 2133, 3001, 3114, 3366 |
| MlsI | TGGCCA | 1 cut(s) | 1521 |
| MluNI | TGGCCA | 1 cut(s) | 1521 |
| MlyI | GAGTC | 7 cut(s) | 49, 846, 930, 2025, 2125, 3362, 3974 |
| MmeI | TCCRAC | 4 cut(s) | 700, 2687, 3176, 3733 |
| Mox20I | TGGCCA | 1 cut(s) | 1521 |
| Mph1103I | ATGCAT | 3 cut(s) | 520, 1530, 1620 |
| MroXI | GAANNNNTTC | 5 cut(s) | 269, 1395, 1749, 2238, 3213 |
| MscI | TGGCCA | 1 cut(s) | 1521 |
| MslI | CAYNNNNRTG | 4 cut(s) | 246, 1613, 3305, 3420 |
| Msp20I | TGGCCA | 1 cut(s) | 1521 |
| MspA1I | CMGCKG | 3 cut(s) | 2784, 2949, 3061 |
| MspCI | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| MspI | CCGG | 2 cut(s) | 1677, 3386 |
| MspR9I | CCNGG | 8 cut(s) | 303, 716, 1677, 1788, 1936, 2253, 2458, 3387 |
| MunI | CAATTG | 2 cut(s) | 1647, 3574 |
| Mva1269I | GAATGC | 1 cut(s) | 1290 |
| MvaI | CCWGG | 6 cut(s) | 303, 716, 1788, 1936, 2253, 2458 |
| MvnI | CGCG | 1 cut(s) | 3585 |
| NciI | CCSGG | 2 cut(s) | 1677, 3387 |
| NdeI | CATATG | 2 cut(s) | 700, 2001 |
| NdeII | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| NlaIV | GGNNCC | 4 cut(s) | 319, 1318, 2851, 3016 |
| NmuCI | GTSAC | 5 cut(s) | 1040, 2017, 3150, 3442, 3685 |
| NsbI | TGCGCA | 2 cut(s) | 566, 1443 |
| NsiI | ATGCAT | 3 cut(s) | 520, 1530, 1620 |
| NspI | RCATGY | 4 cut(s) | 70, 1470, 1873, 3535 |
| NspV | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| PaeI | GCATGC | 1 cut(s) | 1470 |
| PaeR7I | CTCGAG | 1 cut(s) | 2110 |
| PagI | TCATGA | 3 cut(s) | 1134, 2320, 3730 |
| PasI | CCCWGGG | 1 cut(s) | 2457 |
| PciI | ACATGT | 2 cut(s) | 1869, 3531 |
| PciSI | GCTCTTC | 2 cut(s) | 1203, 1665 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2713 |
| PctI | GAATGC | 1 cut(s) | 1290 |
| PdmI | GAANNNNTTC | 5 cut(s) | 269, 1395, 1749, 2238, 3213 |
| PfeI | GAWTC | 9 cut(s) | 749, 770, 977, 1101, 1592, 2044, 3297, 3869, 3896 |
| PflFI | GACNNNGTC | 2 cut(s) | 3163, 3683 |
| PfoI | TCCNGGA | 2 cut(s) | 1934, 3385 |
| PleI | GAGTC | 7 cut(s) | 49, 846, 929, 2024, 2124, 3361, 3973 |
| PpsI | GAGTC | 7 cut(s) | 49, 846, 929, 2024, 2124, 3361, 3973 |
| PscI | ACATGT | 2 cut(s) | 1869, 3531 |
| PsiI | TTATAA | 1 cut(s) | 1476 |
| Psp124BI | GAGCTC | 1 cut(s) | 3114 |
| Psp1406I | AACGTT | 1 cut(s) | 538 |
| Psp6I | CCWGG | 6 cut(s) | 301, 714, 1786, 1934, 2251, 2456 |
| PspGI | CCWGG | 6 cut(s) | 301, 714, 1786, 1934, 2251, 2456 |
| PspN4I | GGNNCC | 4 cut(s) | 319, 1318, 2851, 3016 |
| PspPI | GGNCC | 4 cut(s) | 317, 1773, 1784, 3663 |
| PstI | CTGCAG | 2 cut(s) | 595, 3829 |
| PsuI | RGATCY | 3 cut(s) | 954, 2137, 3389 |
| PsyI | GACNNNGTC | 2 cut(s) | 3163, 3683 |
| PvuII | CAGCTG | 1 cut(s) | 3061 |
| RsaI | GTAC | 8 cut(s) | 456, 1009, 1131, 1500, 1629, 2766, 2931, 3414 |
| RsaNI | GTAC | 8 cut(s) | 455, 1008, 1130, 1499, 1628, 2765, 2930, 3413 |
| RseI | CAYNNNNRTG | 4 cut(s) | 246, 1613, 3305, 3420 |
| SacI | GAGCTC | 1 cut(s) | 3114 |
| SalI | GTCGAC | 1 cut(s) | 97 |
| SapI | GCTCTTC | 2 cut(s) | 1203, 1665 |
| Sau3AI | GATC | 9 cut(s) | 77, 954, 1801, 2137, 2209, 2620, 3389, 3727, 3844 |
| Sau96I | GGNCC | 4 cut(s) | 317, 1773, 1784, 3663 |
| ScaI | AGTACT | 2 cut(s) | 2766, 2931 |
| SchI | GAGTC | 7 cut(s) | 49, 846, 930, 2025, 2125, 3362, 3974 |
| ScrFI | CCNGG | 8 cut(s) | 303, 716, 1677, 1788, 1936, 2253, 2458, 3387 |
| SduI | GDGCHC | 8 cut(s) | 1370, 1677, 1794, 2067, 2133, 3001, 3114, 3366 |
| SfcI | CTRYAG | 6 cut(s) | 591, 789, 972, 1084, 1875, 3825 |
| Sfr274I | CTCGAG | 1 cut(s) | 2110 |
| SfuI | TTCGAA | 3 cut(s) | 273, 867, 2716 |
| SinI | GGWCC | 3 cut(s) | 317, 1773, 3663 |
| SlaI | CTCGAG | 1 cut(s) | 2110 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 246, 1613, 3305, 3420 |
| SmlI | CTYRAG | 8 cut(s) | 2110, 2269, 2363, 2609, 2837, 2872, 3002, 3037 |
| SmoI | CTYRAG | 8 cut(s) | 2110, 2269, 2363, 2609, 2837, 2872, 3002, 3037 |
| SphI | GCATGC | 1 cut(s) | 1470 |
| SsiI | CCGC | 6 cut(s) | 733, 1263, 1544, 2784, 2949, 3317 |
| SspI | AATATT | 2 cut(s) | 601, 2260 |
| SspMI | CTAG | 2 cut(s) | 1239, 2768 |
| SstI | GAGCTC | 1 cut(s) | 3114 |
| StyD4I | CCNGG | 8 cut(s) | 301, 714, 1675, 1786, 1934, 2251, 2456, 3385 |
| StyI | CCWWGG | 2 cut(s) | 2337, 3245 |
| TaaI | ACNGT | 6 cut(s) | 551, 790, 969, 2705, 3163, 3683 |
| TaiI | ACGT | 7 cut(s) | 98, 541, 691, 1409, 1452, 1687, 1800 |
| TatI | WGTACW | 3 cut(s) | 1498, 2764, 2929 |
| TauI | GCSGC | 3 cut(s) | 735, 1547, 3320 |
| TfiI | GAWTC | 9 cut(s) | 749, 770, 977, 1101, 1592, 2044, 3297, 3869, 3896 |
| TscAI | CASTG | 8 cut(s) | 793, 1302, 1377, 2290, 2632, 3159, 3168, 3862 |
| TseFI | GTSAC | 5 cut(s) | 1040, 2017, 3150, 3442, 3685 |
| TseI | GCWGC | 9 cut(s) | 119, 251, 593, 2424, 2427, 3084, 3144, 3270, 3827 |
| Tsp45I | GTSAC | 5 cut(s) | 1040, 2017, 3150, 3442, 3685 |
| TspGWI | ACGGA | 4 cut(s) | 650, 1556, 1832, 2599 |
| TspRI | CASTG | 8 cut(s) | 793, 1302, 1377, 2290, 2632, 3159, 3168, 3862 |
| Tth111I | GACNNNGTC | 2 cut(s) | 3163, 3683 |
| Vha464I | CTTAAG | 4 cut(s) | 2269, 2363, 2837, 3002 |
| VpaK11BI | GGWCC | 3 cut(s) | 317, 1773, 3663 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 833, 1768 |
| XceI | RCATGY | 4 cut(s) | 70, 1470, 1873, 3535 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1529, 2515 |
| XhoI | CTCGAG | 1 cut(s) | 2110 |
| XmiI | GTMKAC | 3 cut(s) | 98, 1512, 3629 |
| XmnI | GAANNNNTTC | 5 cut(s) | 269, 1395, 1749, 2238, 3213 |
| XspI | CTAG | 2 cut(s) | 1239, 2768 |
| ZrmI | AGTACT | 2 cut(s) | 2766, 2931 |
| Zsp2I | ATGCAT | 3 cut(s) | 520, 1530, 1620 |