RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 19 - 188 | 2.7e-22 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 255 - 324 | 2.2e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 636 - 707 | 2.3e-08 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 637 - 739 | 2.2e-15 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 707 - 891 | 1.1e-16 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 733 - 807 | 5.5e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 957 - 1113 | 4.6e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 443, 638, 2378 |
| AccII | CGCG | 1 cut(s) | 2770 |
| AccIII | TCCGGA | 2 cut(s) | 1552, 2897 |
| AciI | CCGC | 7 cut(s) | 247, 426, 1113, 2770, 2816, 3275, 3316 |
| AclWI | GGATC | 2 cut(s) | 2713, 2923 |
| AcuI | CTGAAG | 5 cut(s) | 171, 515, 1196, 1224, 2009 |
| AcvI | CACGTG | 1 cut(s) | 3157 |
| AcyI | GRCGYC | 2 cut(s) | 2819, 3312 |
| AdeI | CACNNNGTG | 1 cut(s) | 2830 |
| AfaI | GTAC | 8 cut(s) | 255, 343, 351, 1196, 1923, 2327, 2613, 2679 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 308, 346, 3190 |
| AflII | CTTAAG | 1 cut(s) | 467 |
| AflIII | ACRYGT | 1 cut(s) | 3156 |
| AjnI | CCWGG | 3 cut(s) | 1647, 2605, 2872 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 378, 384, 410, 416, 2247, 2279 |
| AleI | CACNNNNGTG | 1 cut(s) | 3222 |
| Alw21I | GWGCWC | 3 cut(s) | 2604, 2905, 3199 |
| AlwI | GGATC | 2 cut(s) | 2713, 2923 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1052, 1595 |
| Ama87I | CYCGRG | 2 cut(s) | 2597, 2723 |
| Aor13HI | TCCGGA | 2 cut(s) | 1552, 2897 |
| AoxI | GGCC | 2 cut(s) | 1314, 1348 |
| ApeKI | GCWGC | 6 cut(s) | 1115, 1185, 1689, 1734, 2239, 2319 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1863, 1895, 3143, 3175 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 528, 960, 1209 |
| AspA2I | CCTAGG | 1 cut(s) | 1766 |
| AspLEI | GCGC | 1 cut(s) | 2770 |
| AspS9I | GGNCC | 3 cut(s) | 1315, 2895, 3151 |
| AsuC2I | CCSGG | 1 cut(s) | 987 |
| AsuHPI | GGTGA | 6 cut(s) | 81, 155, 416, 1637, 3119, 3131 |
| AsuII | TTCGAA | 1 cut(s) | 2800 |
| AvaI | CYCGRG | 2 cut(s) | 2597, 2723 |
| AvaII | GGWCC | 2 cut(s) | 2895, 3151 |
| AvrII | CCTAGG | 1 cut(s) | 1766 |
| BanII | GRGCYC | 4 cut(s) | 650, 987, 2604, 2905 |
| BbrPI | CACGTG | 1 cut(s) | 3157 |
| BbsI | GAAGAC | 2 cut(s) | 1202, 2927 |
| Bbv12I | GWGCWC | 3 cut(s) | 2604, 2905, 3199 |
| BbvI | GCAGC | 6 cut(s) | 1127, 1197, 1676, 1721, 2226, 2331 |
| BccI | CCATC | 6 cut(s) | 310, 749, 808, 1282, 2354, 2837 |
| BceAI | ACGGC | 2 cut(s) | 324, 3148 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1858, 1892 |
| BciT130I | CCWGG | 3 cut(s) | 1649, 2607, 2874 |
| BciVI | GTATCC | 2 cut(s) | 1247, 2514 |
| BcnI | CCSGG | 1 cut(s) | 987 |
| BfaI | CTAG | 7 cut(s) | 398, 450, 629, 920, 1167, 1767, 2201 |
| BfmI | CTRYAG | 3 cut(s) | 306, 1690, 2155 |
| BfrI | CTTAAG | 1 cut(s) | 467 |
| BfuI | GTATCC | 2 cut(s) | 1247, 2514 |
| BglII | AGATCT | 6 cut(s) | 283, 1152, 1414, 1669, 2281, 2494 |
| BisI | GCNGC | 8 cut(s) | 1113, 1116, 1186, 1690, 1735, 2240, 2320, 2817 |
| BlnI | CCTAGG | 1 cut(s) | 1766 |
| BlpI | GCTNAGC | 1 cut(s) | 335 |
| BlsI | GCNGC | 8 cut(s) | 1114, 1117, 1187, 1691, 1736, 2241, 2321, 2818 |
| Bme1390I | CCNGG | 4 cut(s) | 987, 1649, 2607, 2874 |
| Bme18I | GGWCC | 2 cut(s) | 2895, 3151 |
| BmeT110I | CYCGRG | 2 cut(s) | 2597, 2723 |
| BmgT120I | GGNCC | 3 cut(s) | 1315, 2895, 3151 |
| BmiI | GGNNCC | 5 cut(s) | 649, 984, 1974, 2187, 2506 |
| BmrFI | CCNGG | 4 cut(s) | 987, 1649, 2607, 2874 |
| BmrI | ACTGGG | 2 cut(s) | 691, 1255 |
| BmsI | GCATC | 5 cut(s) | 258, 472, 1520, 2541, 3245 |
| BmuI | ACTGGG | 2 cut(s) | 691, 1255 |
| BpiI | GAAGAC | 2 cut(s) | 1202, 2927 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 318, 350, 1007, 1039, 1721, 1753, 2228, 2260 |
| BpmI | CTGGAG | 2 cut(s) | 1169, 2666 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 335 |
| Bpu14I | TTCGAA | 1 cut(s) | 2800 |
| BpuEI | CTTGAG | 3 cut(s) | 1694, 1937, 2324 |
| BpuMI | CCSGG | 1 cut(s) | 987 |
| BsaAI | YACGTR | 1 cut(s) | 3157 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2927, 3037 |
| BsaHI | GRCGYC | 2 cut(s) | 2819, 3312 |
| BsaJI | CCNNGG | 5 cut(s) | 1766, 2508, 2605, 2606, 3115 |
| BsaWI | WCCGGW | 3 cut(s) | 1552, 2438, 2897 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2586, 2616, 2639, 2669 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 308, 346, 3190 |
| Bse1I | ACTGG | 4 cut(s) | 686, 957, 1250, 1939 |
| Bse3DI | GCAATG | 1 cut(s) | 1811 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2927, 3037 |
| BseAI | TCCGGA | 2 cut(s) | 1552, 2897 |
| BseBI | CCWGG | 3 cut(s) | 1649, 2607, 2874 |
| BseDI | CCNNGG | 5 cut(s) | 1766, 2508, 2605, 2606, 3115 |
| BseGI | GGATG | 8 cut(s) | 819, 1024, 1535, 2390, 2764, 2791, 2848, 3038 |
| BseJI | GATNNNNATC | 2 cut(s) | 2927, 3037 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 308, 346, 3190 |
| BseMI | GCAATG | 1 cut(s) | 1811 |
| BseMII | CTCAG | 8 cut(s) | 349, 1130, 1304, 1415, 1514, 2365, 2443, 3222 |
| BseNI | ACTGG | 4 cut(s) | 686, 957, 1250, 1939 |
| BseRI | GAGGAG | 4 cut(s) | 230, 995, 1028, 1278 |
| BseXI | GCAGC | 6 cut(s) | 1127, 1197, 1676, 1721, 2226, 2331 |
| BsgI | GTGCAG | 1 cut(s) | 1204 |
| Bsh1236I | CGCG | 1 cut(s) | 2770 |
| BshFI | GGCC | 2 cut(s) | 1316, 1350 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2604, 2905, 3199 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2597, 2723 |
| BsiSI | CCGG | 5 cut(s) | 615, 987, 1553, 2439, 2898 |
| BslFI | GGGAC | 3 cut(s) | 963, 1810, 2297 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 308, 346, 3190 |
| BsmFI | GGGAC | 3 cut(s) | 963, 1810, 2297 |
| BsmI | GAATGC | 4 cut(s) | 1070, 1114, 1958, 2770 |
| BsnI | GGCC | 2 cut(s) | 1316, 1350 |
| BsoBI | CYCGRG | 2 cut(s) | 2597, 2723 |
| Bsp119I | TTCGAA | 1 cut(s) | 2800 |
| Bsp1286I | GDGCHC | 5 cut(s) | 650, 987, 2604, 2905, 3199 |
| Bsp13I | TCCGGA | 2 cut(s) | 1552, 2897 |
| Bsp1407I | TGTACA | 2 cut(s) | 2325, 2677 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 335 |
| Bsp19I | CCATGG | 1 cut(s) | 2508 |
| BspACI | CCGC | 7 cut(s) | 247, 426, 1113, 2770, 2816, 3275, 3316 |
| BspANI | GGCC | 2 cut(s) | 1316, 1350 |
| BspCNI | CTCAG | 8 cut(s) | 348, 1131, 1303, 1416, 1515, 2364, 2442, 3223 |
| BspEI | TCCGGA | 2 cut(s) | 1552, 2897 |
| BspFNI | CGCG | 1 cut(s) | 2770 |
| BspHI | TCATGA | 2 cut(s) | 2091, 3265 |
| BspLI | GGNNCC | 5 cut(s) | 649, 984, 1974, 2187, 2506 |
| BspMAI | CTGCAG | 1 cut(s) | 1694 |
| BspPI | GGATC | 2 cut(s) | 2713, 2923 |
| BspQI | GCTCTTC | 3 cut(s) | 534, 2099, 3219 |
| BspT104I | TTCGAA | 1 cut(s) | 2800 |
| BspTI | CTTAAG | 1 cut(s) | 467 |
| BsrDI | GCAATG | 1 cut(s) | 1811 |
| BsrGI | TGTACA | 2 cut(s) | 2325, 2677 |
| BsrI | ACTGG | 4 cut(s) | 686, 957, 1250, 1939 |
| BssECI | CCNNGG | 5 cut(s) | 1766, 2508, 2605, 2606, 3115 |
| BssNI | GRCGYC | 2 cut(s) | 2819, 3312 |
| BssT1I | CCWWGG | 3 cut(s) | 1766, 2508, 3115 |
| Bst2UI | CCWGG | 3 cut(s) | 1649, 2607, 2874 |
| Bst4CI | ACNGT | 8 cut(s) | 106, 722, 1060, 1322, 2168, 2339, 3102, 3292 |
| Bst6I | CTCTTC | 5 cut(s) | 534, 1224, 2099, 2988, 3219 |
| BstACI | GRCGYC | 2 cut(s) | 2819, 3312 |
| BstAFI | CTTAAG | 1 cut(s) | 467 |
| BstAUI | TGTACA | 2 cut(s) | 2325, 2677 |
| BstBAI | YACGTR | 1 cut(s) | 3157 |
| BstBI | TTCGAA | 1 cut(s) | 2800 |
| BstC8I | GCNNGC | 3 cut(s) | 549, 1700, 2530 |
| BstDSI | CCRYGG | 1 cut(s) | 2508 |
| BstF5I | GGATG | 8 cut(s) | 819, 1024, 1535, 2390, 2764, 2791, 2848, 3038 |
| BstFNI | CGCG | 1 cut(s) | 2770 |
| BstHHI | GCGC | 1 cut(s) | 2770 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1695, 2469 |
| BstNI | CCWGG | 3 cut(s) | 1649, 2607, 2874 |
| BstNSI | RCATGY | 2 cut(s) | 801, 2326 |
| BstSCI | CCNGG | 4 cut(s) | 985, 1647, 2605, 2872 |
| BstSFI | CTRYAG | 3 cut(s) | 306, 1690, 2155 |
| BstUI | CGCG | 1 cut(s) | 2770 |
| BstV1I | GCAGC | 6 cut(s) | 1127, 1197, 1676, 1721, 2226, 2331 |
| BstV2I | GAAGAC | 2 cut(s) | 1202, 2927 |
| BstX2I | RGATCY | 7 cut(s) | 283, 1152, 1414, 1669, 2281, 2494, 2915 |
| BstYI | RGATCY | 7 cut(s) | 283, 1152, 1414, 1669, 2281, 2494, 2915 |
| BsuI | GTATCC | 2 cut(s) | 1247, 2514 |
| BsuRI | GGCC | 2 cut(s) | 1316, 1350 |
| BtgI | CCRYGG | 1 cut(s) | 2508 |
| BtsCI | GGATG | 8 cut(s) | 819, 1024, 1535, 2390, 2764, 2791, 2848, 3038 |
| BtsI | GCAGTG | 2 cut(s) | 661, 977 |
| BtsIMutI | CAGTG | 7 cut(s) | 102, 661, 977, 1243, 1932, 3228, 3297 |
| Cac8I | GCNNGC | 3 cut(s) | 549, 1700, 2530 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1052, 1595 |
| CciI | TCATGA | 2 cut(s) | 2091, 3265 |
| CfoI | GCGC | 1 cut(s) | 2770 |
| Cfr13I | GGNCC | 3 cut(s) | 1315, 2895, 3151 |
| CseI | GACGC | 3 cut(s) | 2798, 2808, 3301 |
| Csp6I | GTAC | 8 cut(s) | 254, 342, 350, 1195, 1922, 2326, 2612, 2678 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 582, 617 |
| CviQI | GTAC | 8 cut(s) | 254, 342, 350, 1195, 1922, 2326, 2612, 2678 |
| DraI | TTTAAA | 2 cut(s) | 1368, 2334 |
| DraIII | CACNNNGTG | 1 cut(s) | 2830 |
| Eam1104I | CTCTTC | 5 cut(s) | 534, 1224, 2099, 2988, 3219 |
| EarI | CTCTTC | 5 cut(s) | 534, 1224, 2099, 2988, 3219 |
| EciI | GGCGGA | 1 cut(s) | 3305 |
| Ecl136II | GAGCTC | 2 cut(s) | 2602, 2903 |
| Eco130I | CCWWGG | 3 cut(s) | 1766, 2508, 3115 |
| Eco24I | GRGCYC | 4 cut(s) | 650, 987, 2604, 2905 |
| Eco32I | GATATC | 1 cut(s) | 1654 |
| Eco47I | GGWCC | 2 cut(s) | 2895, 3151 |
| Eco53kI | GAGCTC | 2 cut(s) | 2602, 2903 |
| Eco57I | CTGAAG | 5 cut(s) | 171, 515, 1196, 1224, 2009 |
| Eco72I | CACGTG | 1 cut(s) | 3157 |
| Eco88I | CYCGRG | 2 cut(s) | 2597, 2723 |
| EcoICRI | GAGCTC | 2 cut(s) | 2602, 2903 |
| EcoRII | CCWGG | 3 cut(s) | 1647, 2605, 2872 |
| EcoRV | GATATC | 1 cut(s) | 1654 |
| EcoT14I | CCWWGG | 3 cut(s) | 1766, 2508, 3115 |
| EcoT22I | ATGCAT | 3 cut(s) | 83, 930, 1070 |
| EcoT38I | GRGCYC | 4 cut(s) | 650, 987, 2604, 2905 |
| ErhI | CCWWGG | 3 cut(s) | 1766, 2508, 3115 |
| FaqI | GGGAC | 3 cut(s) | 963, 1810, 2297 |
| FauNDI | CATATG | 1 cut(s) | 1898 |
| Fnu4HI | GCNGC | 8 cut(s) | 1113, 1116, 1186, 1690, 1735, 2240, 2320, 2817 |
| FokI | GGATG | 8 cut(s) | 826, 1031, 1542, 2377, 2771, 2798, 2855, 3045 |
| FriOI | GRGCYC | 4 cut(s) | 650, 987, 2604, 2905 |
| Fsp4HI | GCNGC | 8 cut(s) | 1113, 1116, 1186, 1690, 1735, 2240, 2320, 2817 |
| FspBI | CTAG | 7 cut(s) | 398, 450, 629, 920, 1167, 1767, 2201 |
| GlaI | GCGC | 1 cut(s) | 2769 |
| GluI | GCNGC | 8 cut(s) | 1113, 1116, 1186, 1690, 1735, 2240, 2320, 2817 |
| GsuI | CTGGAG | 2 cut(s) | 1169, 2666 |
| HaeIII | GGCC | 2 cut(s) | 1316, 1350 |
| HapII | CCGG | 5 cut(s) | 615, 987, 1553, 2439, 2898 |
| HgaI | GACGC | 3 cut(s) | 2798, 2808, 3301 |
| HhaI | GCGC | 1 cut(s) | 2770 |
| Hin1I | GRCGYC | 2 cut(s) | 2819, 3312 |
| Hin6I | GCGC | 1 cut(s) | 2768 |
| HinP1I | GCGC | 1 cut(s) | 2768 |
| HincII | GTYRAC | 1 cut(s) | 1303 |
| HindII | GTYRAC | 1 cut(s) | 1303 |
| HindIII | AAGCTT | 3 cut(s) | 2135, 2300, 2541 |
| HpaI | GTTAAC | 1 cut(s) | 1303 |
| HpaII | CCGG | 5 cut(s) | 615, 987, 1553, 2439, 2898 |
| HphI | GGTGA | 6 cut(s) | 81, 155, 416, 1637, 3119, 3131 |
| Hpy166II | GTNNAC | 1 cut(s) | 1303 |
| Hpy8I | GTNNAC | 1 cut(s) | 1303 |
| HpyCH4III | ACNGT | 8 cut(s) | 106, 722, 1060, 1322, 2168, 2339, 3102, 3292 |
| HpyCH4IV | ACGT | 4 cut(s) | 823, 2197, 2614, 3156 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1695, 2469 |
| HpySE526I | ACGT | 4 cut(s) | 823, 2197, 2614, 3156 |
| Hsp92I | GRCGYC | 2 cut(s) | 2819, 3312 |
| HspAI | GCGC | 1 cut(s) | 2768 |
| Kpn2I | TCCGGA | 2 cut(s) | 1552, 2897 |
| KspAI | GTTAAC | 1 cut(s) | 1303 |
| LguI | GCTCTTC | 3 cut(s) | 534, 2099, 3219 |
| LmnI | GCTCC | 8 cut(s) | 653, 982, 1759, 1972, 2185, 2607, 2900, 3194 |
| Lsp1109I | GCAGC | 6 cut(s) | 1127, 1197, 1676, 1721, 2226, 2331 |
| LweI | GCATC | 5 cut(s) | 258, 472, 1520, 2541, 3245 |
| MaeI | CTAG | 7 cut(s) | 398, 450, 629, 920, 1167, 1767, 2201 |
| MaeII | ACGT | 4 cut(s) | 823, 2197, 2614, 3156 |
| MaeIII | GTNAC | 4 cut(s) | 749, 2820, 2857, 3226 |
| MfeI | CAATTG | 3 cut(s) | 386, 692, 1824 |
| MflI | RGATCY | 7 cut(s) | 283, 1152, 1414, 1669, 2281, 2494, 2915 |
| MhlI | GDGCHC | 5 cut(s) | 650, 987, 2604, 2905, 3199 |
| MlyI | GAGTC | 6 cut(s) | 162, 227, 557, 1435, 2104, 2662 |
| MmeI | TCCRAC | 1 cut(s) | 2820 |
| Mph1103I | ATGCAT | 3 cut(s) | 83, 930, 1070 |
| MroI | TCCGGA | 2 cut(s) | 1552, 2897 |
| MroXI | GAANNNNTTC | 3 cut(s) | 528, 960, 1209 |
| MslI | CAYNNNNRTG | 4 cut(s) | 76, 1107, 1310, 3222 |
| MspA1I | CMGCKG | 1 cut(s) | 1702 |
| MspCI | CTTAAG | 1 cut(s) | 467 |
| MspI | CCGG | 5 cut(s) | 615, 987, 1553, 2439, 2898 |
| MspR9I | CCNGG | 4 cut(s) | 987, 1649, 2607, 2874 |
| MunI | CAATTG | 3 cut(s) | 386, 692, 1824 |
| Mva1269I | GAATGC | 4 cut(s) | 1070, 1114, 1958, 2770 |
| MvaI | CCWGG | 3 cut(s) | 1649, 2607, 2874 |
| MvnI | CGCG | 1 cut(s) | 2770 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1695, 2469 |
| NciI | CCSGG | 1 cut(s) | 987 |
| NcoI | CCATGG | 1 cut(s) | 2508 |
| NdeI | CATATG | 1 cut(s) | 1898 |
| NlaIV | GGNNCC | 5 cut(s) | 649, 984, 1974, 2187, 2506 |
| NmeAIII | GCCGAG | 1 cut(s) | 2527 |
| NmuCI | GTSAC | 2 cut(s) | 2820, 3226 |
| NsiI | ATGCAT | 3 cut(s) | 83, 930, 1070 |
| NspI | RCATGY | 2 cut(s) | 801, 2326 |
| NspV | TTCGAA | 1 cut(s) | 2800 |
| OliI | CACNNNNGTG | 1 cut(s) | 3222 |
| PagI | TCATGA | 2 cut(s) | 2091, 3265 |
| PasI | CCCWGGG | 1 cut(s) | 2606 |
| PciSI | GCTCTTC | 3 cut(s) | 534, 2099, 3219 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2806 |
| PctI | GAATGC | 4 cut(s) | 1070, 1114, 1958, 2770 |
| PdmI | GAANNNNTTC | 3 cut(s) | 528, 960, 1209 |
| PfoI | TCCNGGA | 1 cut(s) | 2872 |
| PkrI | GCNGC | 8 cut(s) | 1114, 1117, 1187, 1691, 1736, 2241, 2321, 2818 |
| PleI | GAGTC | 6 cut(s) | 162, 226, 557, 1434, 2103, 2662 |
| PmaCI | CACGTG | 1 cut(s) | 3157 |
| PmlI | CACGTG | 1 cut(s) | 3157 |
| PpsI | GAGTC | 6 cut(s) | 162, 226, 557, 1434, 2103, 2662 |
| Ppu21I | YACGTR | 1 cut(s) | 3157 |
| PsiI | TTATAA | 3 cut(s) | 443, 638, 2378 |
| Psp124BI | GAGCTC | 2 cut(s) | 2604, 2905 |
| Psp6I | CCWGG | 3 cut(s) | 1647, 2605, 2872 |
| PspCI | CACGTG | 1 cut(s) | 3157 |
| PspGI | CCWGG | 3 cut(s) | 1647, 2605, 2872 |
| PspN4I | GGNNCC | 5 cut(s) | 649, 984, 1974, 2187, 2506 |
| PspPI | GGNCC | 3 cut(s) | 1315, 2895, 3151 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 342, 374 |
| PstI | CTGCAG | 1 cut(s) | 1694 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1052, 1595 |
| PsuI | RGATCY | 7 cut(s) | 283, 1152, 1414, 1669, 2281, 2494, 2915 |
| PvuII | CAGCTG | 1 cut(s) | 1702 |
| RsaI | GTAC | 8 cut(s) | 255, 343, 351, 1196, 1923, 2327, 2613, 2679 |
| RsaNI | GTAC | 8 cut(s) | 254, 342, 350, 1195, 1922, 2326, 2612, 2678 |
| RseI | CAYNNNNRTG | 4 cut(s) | 76, 1107, 1310, 3222 |
| SacI | GAGCTC | 2 cut(s) | 2604, 2905 |
| SapI | GCTCTTC | 3 cut(s) | 534, 2099, 3219 |
| SatI | GCNGC | 8 cut(s) | 1113, 1116, 1186, 1690, 1735, 2240, 2320, 2817 |
| Sau96I | GGNCC | 3 cut(s) | 1315, 2895, 3151 |
| SchI | GAGTC | 6 cut(s) | 162, 227, 557, 1435, 2104, 2662 |
| ScrFI | CCNGG | 4 cut(s) | 987, 1649, 2607, 2874 |
| SduI | GDGCHC | 5 cut(s) | 650, 987, 2604, 2905, 3199 |
| SfaNI | GCATC | 5 cut(s) | 258, 472, 1520, 2541, 3245 |
| SfcI | CTRYAG | 3 cut(s) | 306, 1690, 2155 |
| SfuI | TTCGAA | 1 cut(s) | 2800 |
| SinI | GGWCC | 2 cut(s) | 2895, 3151 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 76, 1107, 1310, 3222 |
| SmlI | CTYRAG | 4 cut(s) | 467, 1673, 1916, 2303 |
| SmoI | CTYRAG | 4 cut(s) | 467, 1673, 1916, 2303 |
| SsiI | CCGC | 7 cut(s) | 247, 426, 1113, 2770, 2816, 3275, 3316 |
| SspI | AATATT | 2 cut(s) | 292, 1268 |
| SspMI | CTAG | 7 cut(s) | 398, 450, 629, 920, 1167, 1767, 2201 |
| SstI | GAGCTC | 2 cut(s) | 2604, 2905 |
| StyD4I | CCNGG | 4 cut(s) | 985, 1647, 2605, 2872 |
| StyI | CCWWGG | 3 cut(s) | 1766, 2508, 3115 |
| TaaI | ACNGT | 8 cut(s) | 106, 722, 1060, 1322, 2168, 2339, 3102, 3292 |
| TaiI | ACGT | 4 cut(s) | 826, 2200, 2617, 3159 |
| TatI | WGTACW | 3 cut(s) | 253, 2325, 2677 |
| TauI | GCSGC | 2 cut(s) | 1115, 2819 |
| TscAI | CASTG | 7 cut(s) | 109, 668, 977, 1250, 1939, 3235, 3297 |
| TseFI | GTSAC | 2 cut(s) | 2820, 3226 |
| TseI | GCWGC | 6 cut(s) | 1115, 1185, 1689, 1734, 2239, 2319 |
| Tsp45I | GTSAC | 2 cut(s) | 2820, 3226 |
| TspGWI | ACGGA | 2 cut(s) | 2276, 2921 |
| TspRI | CASTG | 7 cut(s) | 109, 668, 977, 1250, 1939, 3235, 3297 |
| Vha464I | CTTAAG | 1 cut(s) | 467 |
| VpaK11BI | GGWCC | 2 cut(s) | 2895, 3151 |
| XbaI | TCTAGA | 1 cut(s) | 2200 |
| XceI | RCATGY | 2 cut(s) | 801, 2326 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 37, 2613 |
| XmaJI | CCTAGG | 1 cut(s) | 1766 |
| XmnI | GAANNNNTTC | 3 cut(s) | 528, 960, 1209 |
| XspI | CTAG | 7 cut(s) | 398, 450, 629, 920, 1167, 1767, 2201 |
| Zsp2I | ATGCAT | 3 cut(s) | 83, 930, 1070 |