RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 188 | 5.3e-54 | TIR domain |
| TIR_2 | PF13676 | 21 - 138 | 5.7e-16 | TIR domain |
| NB-ARC | PF00931 | 200 - 369 | 1.3e-16 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 438 - 509 | 3.7e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 982 - 1114 | 1.2e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1299 |
| AarI | CACCTGC | 1 cut(s) | 2716 |
| AatII | GACGTC | 1 cut(s) | 2747 |
| Acc36I | ACCTGC | 1 cut(s) | 2716 |
| AccB1I | GGYRCC | 1 cut(s) | 1005 |
| AccBSI | CCGCTC | 1 cut(s) | 3399 |
| AccI | GTMKAC | 1 cut(s) | 1743 |
| AccII | CGCG | 1 cut(s) | 91 |
| AccIII | TCCGGA | 1 cut(s) | 2959 |
| AciI | CCGC | 8 cut(s) | 9, 130, 649, 675, 3322, 3351, 3387, 3399 |
| AclI | AACGTT | 1 cut(s) | 412 |
| AclWI | GGATC | 4 cut(s) | 338, 2759, 3313, 3326 |
| AcuI | CTGAAG | 6 cut(s) | 1182, 1400, 1812, 2061, 2654, 3509 |
| AcyI | GRCGYC | 2 cut(s) | 1006, 2744 |
| AfaI | GTAC | 5 cut(s) | 357, 742, 889, 1531, 1763 |
| AfeI | AGCGCT | 1 cut(s) | 2682 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 258, 759, 857, 1002, 1418, 2293, 3151, 3163, 3204 |
| AflIII | ACRYGT | 2 cut(s) | 352, 3086 |
| AjiI | CACGTC | 1 cut(s) | 2715 |
| AjnI | CCWGG | 2 cut(s) | 1275, 3355 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2484, 2516 |
| AleI | CACNNNNGTG | 1 cut(s) | 3114 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1413, 1445 |
| Alw21I | GWGCWC | 7 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714 |
| Alw26I | GTCTC | 3 cut(s) | 1315, 1449, 1788 |
| Alw44I | GTGCAC | 2 cut(s) | 1407, 2710 |
| AlwI | GGATC | 4 cut(s) | 338, 2759, 3313, 3326 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2933 |
| Ama87I | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| Aor13HI | TCCGGA | 1 cut(s) | 2959 |
| Aor51HI | AGCGCT | 1 cut(s) | 2682 |
| AoxI | GGCC | 5 cut(s) | 574, 1749, 1795, 2620, 3352 |
| ApaLI | GTGCAC | 2 cut(s) | 1407, 2710 |
| ApeKI | GCWGC | 4 cut(s) | 29, 458, 2683, 2722 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1097, 1851, 2115, 2784, 3175 |
| AspLEI | GCGC | 5 cut(s) | 93, 193, 1008, 2683, 3059 |
| AspS9I | GGNCC | 5 cut(s) | 495, 574, 3154, 3195, 3353 |
| AsuC2I | CCSGG | 6 cut(s) | 1541, 1542, 2324, 2945, 2946, 3205 |
| AsuHPI | GGTGA | 4 cut(s) | 704, 1060, 3128, 3238 |
| AvaI | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| AvaII | GGWCC | 3 cut(s) | 495, 3154, 3195 |
| BaeGI | GKGCMC | 3 cut(s) | 1411, 2714, 3567 |
| BamHI | GGATCC | 1 cut(s) | 3318 |
| BanI | GGYRCC | 1 cut(s) | 1005 |
| BanII | GRGCYC | 2 cut(s) | 807, 2676 |
| BauI | CACGAG | 1 cut(s) | 899 |
| BbsI | GAAGAC | 2 cut(s) | 1552, 2580 |
| Bbv12I | GWGCWC | 7 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714 |
| BbvI | GCAGC | 4 cut(s) | 16, 470, 2670, 2734 |
| BccI | CCATC | 7 cut(s) | 355, 859, 1100, 1495, 1811, 1849, 2699 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1906, 1940 |
| BciT130I | CCWGG | 2 cut(s) | 1277, 3357 |
| BciVI | GTATCC | 3 cut(s) | 1178, 1814, 3122 |
| BcnI | CCSGG | 6 cut(s) | 1541, 1542, 2324, 2945, 2946, 3205 |
| BcoDI | GTCTC | 3 cut(s) | 1315, 1449, 1788 |
| BfaI | CTAG | 5 cut(s) | 258, 1641, 2447, 2570, 2687 |
| BfmI | CTRYAG | 2 cut(s) | 456, 855 |
| BfoI | RGCGCY | 2 cut(s) | 1009, 2684 |
| BfuAI | ACCTGC | 1 cut(s) | 2716 |
| BfuI | GTATCC | 3 cut(s) | 1178, 1814, 3122 |
| BglII | AGATCT | 4 cut(s) | 1945, 1981, 2188, 2221 |
| BisI | GCNGC | 6 cut(s) | 30, 459, 2684, 2723, 3352, 3388 |
| BlsI | GCNGC | 6 cut(s) | 31, 460, 2685, 2724, 3353, 3389 |
| Bme1390I | CCNGG | 8 cut(s) | 1277, 1541, 1542, 2324, 2945, 2946, 3205, 3357 |
| Bme18I | GGWCC | 3 cut(s) | 495, 3154, 3195 |
| BmeT110I | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| BmgBI | CACGTC | 1 cut(s) | 2715 |
| BmgT120I | GGNCC | 5 cut(s) | 495, 574, 3154, 3195, 3353 |
| BmiI | GGNNCC | 5 cut(s) | 575, 1007, 1195, 3229, 3320 |
| BmrFI | CCNGG | 8 cut(s) | 1277, 1541, 1542, 2324, 2945, 2946, 3205, 3357 |
| BmrI | ACTGGG | 1 cut(s) | 1822 |
| BmuI | ACTGGG | 1 cut(s) | 1822 |
| BoxI | GACNNNNGTC | 2 cut(s) | 831, 1780 |
| BpiI | GAAGAC | 2 cut(s) | 1552, 2580 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3219, 3251 |
| BpmI | CTGGAG | 1 cut(s) | 2997 |
| BpuEI | CTTGAG | 4 cut(s) | 1061, 1714, 1755, 2051 |
| BpuMI | CCSGG | 6 cut(s) | 1541, 1542, 2324, 2945, 2946, 3205 |
| Bsa29I | ATCGAT | 1 cut(s) | 2908 |
| BsaAI | YACGTR | 3 cut(s) | 887, 1859, 2852 |
| BsaBI | GATNNNNATC | 4 cut(s) | 551, 1032, 1578, 3133 |
| BsaHI | GRCGYC | 2 cut(s) | 1006, 2744 |
| BsaJI | CCNNGG | 5 cut(s) | 498, 1540, 2944, 3204, 3355 |
| BsaWI | WCCGGW | 1 cut(s) | 2959 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2658, 2688, 3523, 3553 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 258, 759, 857, 1002, 1418, 2293, 3151, 3163, 3204 |
| Bse1I | ACTGG | 2 cut(s) | 1606, 1817 |
| Bse3DI | GCAATG | 2 cut(s) | 2344, 2717 |
| Bse8I | GATNNNNATC | 4 cut(s) | 551, 1032, 1578, 3133 |
| BseAI | TCCGGA | 1 cut(s) | 2959 |
| BseBI | CCWGG | 2 cut(s) | 1277, 3357 |
| BseCI | ATCGAT | 1 cut(s) | 2908 |
| BseDI | CCNNGG | 5 cut(s) | 498, 1540, 2944, 3204, 3355 |
| BseJI | GATNNNNATC | 4 cut(s) | 551, 1032, 1578, 3133 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 258, 759, 857, 1002, 1418, 2293, 3151, 3163, 3204 |
| BseMI | GCAATG | 2 cut(s) | 2344, 2717 |
| BseMII | CTCAG | 6 cut(s) | 1980, 2081, 2239, 2437, 2481, 3527 |
| BseNI | ACTGG | 2 cut(s) | 1606, 1817 |
| BseRI | GAGGAG | 2 cut(s) | 186, 779 |
| BseSI | GKGCMC | 3 cut(s) | 1411, 2714, 3567 |
| BseXI | GCAGC | 4 cut(s) | 16, 470, 2670, 2734 |
| BseYI | CCCAGC | 2 cut(s) | 2677, 3476 |
| BsgI | GTGCAG | 3 cut(s) | 2733, 3000, 3243 |
| Bsh1236I | CGCG | 1 cut(s) | 91 |
| BshFI | GGCC | 5 cut(s) | 576, 1751, 1797, 2622, 3354 |
| BshNI | GGYRCC | 1 cut(s) | 1005 |
| BshVI | ATCGAT | 1 cut(s) | 2908 |
| BsiHKAI | GWGCWC | 7 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| BsiSI | CCGG | 5 cut(s) | 1541, 2324, 2945, 2960, 3204 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 258, 759, 857, 1002, 1418, 2293, 3151, 3163, 3204 |
| BsmAI | GTCTC | 3 cut(s) | 1315, 1449, 1788 |
| BsmI | GAATGC | 2 cut(s) | 2297, 2651 |
| BsnI | GGCC | 5 cut(s) | 576, 1751, 1797, 2622, 3354 |
| BsoBI | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| Bsp1286I | GDGCHC | 8 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714, 3567 |
| Bsp13I | TCCGGA | 1 cut(s) | 2959 |
| Bsp1407I | TGTACA | 1 cut(s) | 740 |
| BspACI | CCGC | 8 cut(s) | 9, 130, 649, 675, 3322, 3351, 3387, 3399 |
| BspANI | GGCC | 5 cut(s) | 576, 1751, 1797, 2622, 3354 |
| BspCNI | CTCAG | 6 cut(s) | 1981, 2082, 2238, 2436, 2480, 3526 |
| BspDI | ATCGAT | 1 cut(s) | 2908 |
| BspEI | TCCGGA | 1 cut(s) | 2959 |
| BspFNI | CGCG | 1 cut(s) | 91 |
| BspHI | TCATGA | 2 cut(s) | 46, 397 |
| BspLI | GGNNCC | 5 cut(s) | 575, 1007, 1195, 3229, 3320 |
| BspMAI | CTGCAG | 1 cut(s) | 460 |
| BspMI | ACCTGC | 1 cut(s) | 2716 |
| BspPI | GGATC | 4 cut(s) | 338, 2759, 3313, 3326 |
| BspT107I | GGYRCC | 1 cut(s) | 1005 |
| BsrBI | CCGCTC | 1 cut(s) | 3399 |
| BsrDI | GCAATG | 2 cut(s) | 2344, 2717 |
| BsrGI | TGTACA | 1 cut(s) | 740 |
| BsrI | ACTGG | 2 cut(s) | 1606, 1817 |
| BssECI | CCNNGG | 5 cut(s) | 498, 1540, 2944, 3204, 3355 |
| BssNI | GRCGYC | 2 cut(s) | 1006, 2744 |
| BssSI | CACGAG | 1 cut(s) | 899 |
| Bst2BI | CACGAG | 1 cut(s) | 899 |
| Bst2UI | CCWGG | 2 cut(s) | 1277, 3357 |
| Bst4CI | ACNGT | 9 cut(s) | 716, 933, 1659, 1826, 2777, 2935, 3154, 3418, 3439 |
| Bst6I | CTCTTC | 6 cut(s) | 19, 259, 727, 1137, 1791, 3485 |
| BstACI | GRCGYC | 2 cut(s) | 1006, 2744 |
| BstAUI | TGTACA | 1 cut(s) | 740 |
| BstBAI | YACGTR | 3 cut(s) | 887, 1859, 2852 |
| BstC8I | GCNNGC | 4 cut(s) | 299, 3232, 3362, 3498 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 256 |
| BstFNI | CGCG | 1 cut(s) | 91 |
| BstH2I | RGCGCY | 2 cut(s) | 1009, 2684 |
| BstHHI | GCGC | 5 cut(s) | 93, 193, 1008, 2683, 3059 |
| BstMAI | GTCTC | 3 cut(s) | 1315, 1449, 1788 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 802, 2680, 3056, 3065, 3357, 3396 |
| BstNI | CCWGG | 2 cut(s) | 1277, 3357 |
| BstNSI | RCATGY | 3 cut(s) | 356, 1347, 3090 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 831, 1780 |
| BstSCI | CCNGG | 8 cut(s) | 1275, 1539, 1540, 2322, 2943, 2944, 3203, 3355 |
| BstSFI | CTRYAG | 2 cut(s) | 456, 855 |
| BstSLI | GKGCMC | 3 cut(s) | 1411, 2714, 3567 |
| BstUI | CGCG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 4 cut(s) | 16, 470, 2670, 2734 |
| BstV2I | GAAGAC | 2 cut(s) | 1552, 2580 |
| BstX2I | RGATCY | 7 cut(s) | 343, 1945, 1981, 2188, 2221, 2764, 3318 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3344 |
| BstYI | RGATCY | 7 cut(s) | 343, 1945, 1981, 2188, 2221, 2764, 3318 |
| Bsu15I | ATCGAT | 1 cut(s) | 2908 |
| BsuI | GTATCC | 3 cut(s) | 1178, 1814, 3122 |
| BsuRI | GGCC | 5 cut(s) | 576, 1751, 1797, 2622, 3354 |
| BsuTUI | ATCGAT | 1 cut(s) | 2908 |
| BtrI | CACGTC | 1 cut(s) | 2715 |
| BtsIMutI | CAGTG | 4 cut(s) | 1467, 2233, 3000, 3098 |
| BveI | ACCTGC | 1 cut(s) | 2716 |
| Cac8I | GCNNGC | 4 cut(s) | 299, 3232, 3362, 3498 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2933 |
| CciI | TCATGA | 2 cut(s) | 46, 397 |
| CfoI | GCGC | 5 cut(s) | 93, 193, 1008, 2683, 3059 |
| Cfr13I | GGNCC | 5 cut(s) | 495, 574, 3154, 3195, 3353 |
| Cfr9I | CCCGGG | 2 cut(s) | 1540, 2944 |
| ClaI | ATCGAT | 1 cut(s) | 2908 |
| CseI | GACGC | 4 cut(s) | 128, 638, 1557, 3252 |
| Csp6I | GTAC | 5 cut(s) | 356, 741, 888, 1530, 1762 |
| CviQI | GTAC | 5 cut(s) | 356, 741, 888, 1530, 1762 |
| DinI | GGCGCC | 1 cut(s) | 1007 |
| DraI | TTTAAA | 3 cut(s) | 126, 873, 1831 |
| Eam1104I | CTCTTC | 6 cut(s) | 19, 259, 727, 1137, 1791, 3485 |
| EarI | CTCTTC | 6 cut(s) | 19, 259, 727, 1137, 1791, 3485 |
| EciI | GGCGGA | 1 cut(s) | 638 |
| Ecl136II | GAGCTC | 2 cut(s) | 805, 2674 |
| Eco147I | AGGCCT | 1 cut(s) | 1797 |
| Eco24I | GRGCYC | 2 cut(s) | 807, 2676 |
| Eco32I | GATATC | 2 cut(s) | 532, 1805 |
| Eco47I | GGWCC | 3 cut(s) | 495, 3154, 3195 |
| Eco47III | AGCGCT | 1 cut(s) | 2682 |
| Eco53kI | GAGCTC | 2 cut(s) | 805, 2674 |
| Eco57I | CTGAAG | 6 cut(s) | 1182, 1400, 1812, 2061, 2654, 3509 |
| Eco88I | CYCGRG | 4 cut(s) | 1540, 1778, 2669, 2944 |
| EcoICRI | GAGCTC | 2 cut(s) | 805, 2674 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 256 |
| EcoO109I | RGGNCCY | 1 cut(s) | 574 |
| EcoRI | GAATTC | 1 cut(s) | 644 |
| EcoRII | CCWGG | 2 cut(s) | 1275, 3355 |
| EcoRV | GATATC | 2 cut(s) | 532, 1805 |
| EcoT22I | ATGCAT | 5 cut(s) | 388, 626, 1398, 1485, 1689 |
| EcoT38I | GRGCYC | 2 cut(s) | 807, 2676 |
| EgeI | GGCGCC | 1 cut(s) | 1007 |
| EheI | GGCGCC | 1 cut(s) | 1007 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1749, 1781, 2772, 2804 |
| FblI | GTMKAC | 1 cut(s) | 1743 |
| Fnu4HI | GCNGC | 6 cut(s) | 30, 459, 2684, 2723, 3352, 3388 |
| FriOI | GRGCYC | 2 cut(s) | 807, 2676 |
| Fsp4HI | GCNGC | 6 cut(s) | 30, 459, 2684, 2723, 3352, 3388 |
| FspBI | CTAG | 5 cut(s) | 258, 1641, 2447, 2570, 2687 |
| GlaI | GCGC | 5 cut(s) | 92, 192, 1007, 2682, 3058 |
| GluI | GCNGC | 6 cut(s) | 30, 459, 2684, 2723, 3352, 3388 |
| GsaI | CCCAGC | 2 cut(s) | 2681, 3480 |
| GsuI | CTGGAG | 1 cut(s) | 2997 |
| HaeII | RGCGCY | 2 cut(s) | 1009, 2684 |
| HaeIII | GGCC | 5 cut(s) | 576, 1751, 1797, 2622, 3354 |
| HapII | CCGG | 5 cut(s) | 1541, 2324, 2945, 2960, 3204 |
| HgaI | GACGC | 4 cut(s) | 128, 638, 1557, 3252 |
| HhaI | GCGC | 5 cut(s) | 93, 193, 1008, 2683, 3059 |
| Hin1I | GRCGYC | 2 cut(s) | 1006, 2744 |
| Hin6I | GCGC | 5 cut(s) | 91, 191, 1006, 2681, 3057 |
| HinP1I | GCGC | 5 cut(s) | 91, 191, 1006, 2681, 3057 |
| HincII | GTYRAC | 4 cut(s) | 453, 1633, 2916, 3084 |
| HindII | GTYRAC | 4 cut(s) | 453, 1633, 2916, 3084 |
| HindIII | AAGCTT | 5 cut(s) | 1095, 2032, 2276, 2371, 2654 |
| HpaI | GTTAAC | 1 cut(s) | 1633 |
| HpaII | CCGG | 5 cut(s) | 1541, 2324, 2945, 2960, 3204 |
| HphI | GGTGA | 4 cut(s) | 704, 1060, 3128, 3238 |
| HpyCH4III | ACNGT | 9 cut(s) | 716, 933, 1659, 1826, 2777, 2935, 3154, 3418, 3439 |
| HpyCH4IV | ACGT | 7 cut(s) | 313, 412, 886, 1858, 2714, 2744, 2851 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 802, 2680, 3056, 3065, 3357, 3396 |
| HpySE526I | ACGT | 7 cut(s) | 313, 412, 886, 1858, 2714, 2744, 2851 |
| Hsp92I | GRCGYC | 2 cut(s) | 1006, 2744 |
| HspAI | GCGC | 5 cut(s) | 91, 191, 1006, 2681, 3057 |
| KasI | GGCGCC | 1 cut(s) | 1005 |
| Kpn2I | TCCGGA | 1 cut(s) | 2959 |
| KspAI | GTTAAC | 1 cut(s) | 1633 |
| LmnI | GCTCC | 5 cut(s) | 1720, 2679, 2829, 3227, 3544 |
| Lsp1109I | GCAGC | 4 cut(s) | 16, 470, 2670, 2734 |
| MaeI | CTAG | 5 cut(s) | 258, 1641, 2447, 2570, 2687 |
| MaeII | ACGT | 7 cut(s) | 313, 412, 886, 1858, 2714, 2744, 2851 |
| MaeIII | GTNAC | 8 cut(s) | 716, 882, 1305, 1859, 2328, 2517, 2771, 2929 |
| MbiI | CCGCTC | 1 cut(s) | 3399 |
| MfeI | CAATTG | 2 cut(s) | 204, 1512 |
| MflI | RGATCY | 7 cut(s) | 343, 1945, 1981, 2188, 2221, 2764, 3318 |
| MhlI | GDGCHC | 8 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714, 3567 |
| Mly113I | GGCGCC | 1 cut(s) | 1006 |
| MlyI | GAGTC | 6 cut(s) | 601, 776, 1672, 1770, 1790, 2002 |
| MmeI | TCCRAC | 1 cut(s) | 750 |
| Mph1103I | ATGCAT | 5 cut(s) | 388, 626, 1398, 1485, 1689 |
| MroI | TCCGGA | 1 cut(s) | 2959 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1097, 1851, 2115, 2784, 3175 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1439, 3091, 3114, 3219 |
| MspI | CCGG | 5 cut(s) | 1541, 2324, 2945, 2960, 3204 |
| MspR9I | CCNGG | 8 cut(s) | 1277, 1541, 1542, 2324, 2945, 2946, 3205, 3357 |
| MunI | CAATTG | 2 cut(s) | 204, 1512 |
| Mva1269I | GAATGC | 2 cut(s) | 2297, 2651 |
| MvaI | CCWGG | 2 cut(s) | 1277, 3357 |
| MvnI | CGCG | 1 cut(s) | 91 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 802, 2680, 3056, 3065, 3357, 3396 |
| NarI | GGCGCC | 1 cut(s) | 1006 |
| NciI | CCSGG | 6 cut(s) | 1541, 1542, 2324, 2945, 2946, 3205 |
| NlaIV | GGNNCC | 5 cut(s) | 575, 1007, 1195, 3229, 3320 |
| NmuCI | GTSAC | 2 cut(s) | 716, 882 |
| NsiI | ATGCAT | 5 cut(s) | 388, 626, 1398, 1485, 1689 |
| NspI | RCATGY | 3 cut(s) | 356, 1347, 3090 |
| OliI | CACNNNNGTG | 1 cut(s) | 3114 |
| PaeR7I | CTCGAG | 1 cut(s) | 1778 |
| PagI | TCATGA | 2 cut(s) | 46, 397 |
| PaqCI | CACCTGC | 1 cut(s) | 2716 |
| PceI | AGGCCT | 1 cut(s) | 1797 |
| PciI | ACATGT | 2 cut(s) | 352, 3086 |
| PctI | GAATGC | 2 cut(s) | 2297, 2651 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1097, 1851, 2115, 2784, 3175 |
| PfoI | TCCNGGA | 2 cut(s) | 1275, 2322 |
| PkrI | GCNGC | 6 cut(s) | 31, 460, 2685, 2724, 3353, 3389 |
| PleI | GAGTC | 6 cut(s) | 600, 775, 1671, 1770, 1789, 2001 |
| PluTI | GGCGCC | 1 cut(s) | 1009 |
| PpsI | GAGTC | 6 cut(s) | 600, 775, 1671, 1770, 1789, 2001 |
| Ppu21I | YACGTR | 3 cut(s) | 887, 1859, 2852 |
| PscI | ACATGT | 2 cut(s) | 352, 3086 |
| PshAI | GACNNNNGTC | 2 cut(s) | 831, 1780 |
| PsiI | TTATAA | 1 cut(s) | 1299 |
| Psp124BI | GAGCTC | 2 cut(s) | 807, 2676 |
| Psp1406I | AACGTT | 1 cut(s) | 412 |
| Psp6I | CCWGG | 2 cut(s) | 1275, 3355 |
| PspFI | CCCAGC | 2 cut(s) | 2677, 3476 |
| PspGI | CCWGG | 2 cut(s) | 1275, 3355 |
| PspN4I | GGNNCC | 5 cut(s) | 575, 1007, 1195, 3229, 3320 |
| PspPI | GGNCC | 5 cut(s) | 495, 574, 3154, 3195, 3353 |
| PspXI | VCTCGAGB | 1 cut(s) | 1778 |
| PstI | CTGCAG | 1 cut(s) | 460 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2933 |
| PsuI | RGATCY | 7 cut(s) | 343, 1945, 1981, 2188, 2221, 2764, 3318 |
| RsaI | GTAC | 5 cut(s) | 357, 742, 889, 1531, 1763 |
| RsaNI | GTAC | 5 cut(s) | 356, 741, 888, 1530, 1762 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1439, 3091, 3114, 3219 |
| SacI | GAGCTC | 2 cut(s) | 807, 2676 |
| SatI | GCNGC | 6 cut(s) | 30, 459, 2684, 2723, 3352, 3388 |
| Sau96I | GGNCC | 5 cut(s) | 495, 574, 3154, 3195, 3353 |
| SchI | GAGTC | 6 cut(s) | 601, 776, 1672, 1770, 1790, 2002 |
| ScrFI | CCNGG | 8 cut(s) | 1277, 1541, 1542, 2324, 2945, 2946, 3205, 3357 |
| SduI | GDGCHC | 8 cut(s) | 432, 807, 900, 1411, 2483, 2676, 2714, 3567 |
| SfcI | CTRYAG | 2 cut(s) | 456, 855 |
| SfoI | GGCGCC | 1 cut(s) | 1007 |
| Sfr274I | CTCGAG | 1 cut(s) | 1778 |
| SinI | GGWCC | 3 cut(s) | 495, 3154, 3195 |
| SlaI | CTCGAG | 1 cut(s) | 1778 |
| SmaI | CCCGGG | 2 cut(s) | 1542, 2946 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1439, 3091, 3114, 3219 |
| SmlI | CTYRAG | 5 cut(s) | 1076, 1693, 1770, 1778, 2066 |
| SmoI | CTYRAG | 5 cut(s) | 1076, 1693, 1770, 1778, 2066 |
| SseBI | AGGCCT | 1 cut(s) | 1797 |
| SsiI | CCGC | 8 cut(s) | 9, 130, 649, 675, 3322, 3351, 3387, 3399 |
| SspDI | GGCGCC | 1 cut(s) | 1005 |
| SspI | AATATT | 4 cut(s) | 1248, 2002, 2209, 3303 |
| SspMI | CTAG | 5 cut(s) | 258, 1641, 2447, 2570, 2687 |
| SstI | GAGCTC | 2 cut(s) | 807, 2676 |
| StuI | AGGCCT | 1 cut(s) | 1797 |
| StyD4I | CCNGG | 8 cut(s) | 1275, 1539, 1540, 2322, 2943, 2944, 3203, 3355 |
| TaaI | ACNGT | 9 cut(s) | 716, 933, 1659, 1826, 2777, 2935, 3154, 3418, 3439 |
| TaiI | ACGT | 7 cut(s) | 316, 415, 889, 1861, 2717, 2747, 2854 |
| TaqI | TCGA | 8 cut(s) | 224, 560, 732, 1779, 2441, 2908, 3078, 3395 |
| TaqII | GACCGA | 2 cut(s) | 512, 2462 |
| TatI | WGTACW | 2 cut(s) | 740, 1529 |
| TauI | GCSGC | 2 cut(s) | 3354, 3390 |
| TscAI | CASTG | 4 cut(s) | 1467, 2233, 3000, 3098 |
| TseFI | GTSAC | 2 cut(s) | 716, 882 |
| TseI | GCWGC | 4 cut(s) | 29, 458, 2683, 2722 |
| Tsp45I | GTSAC | 2 cut(s) | 716, 882 |
| TspDTI | ATGAA | 9 cut(s) | 288, 414, 936, 1700, 2040, 2244, 2375, 2785, 2879 |
| TspGWI | ACGGA | 3 cut(s) | 373, 1193, 2933 |
| TspMI | CCCGGG | 2 cut(s) | 1540, 2944 |
| TspRI | CASTG | 4 cut(s) | 1467, 2233, 3000, 3098 |
| VneI | GTGCAC | 2 cut(s) | 1407, 2710 |
| VpaK11BI | GGWCC | 3 cut(s) | 495, 3154, 3195 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 256 |
| XbaI | TCTAGA | 1 cut(s) | 2569 |
| XceI | RCATGY | 3 cut(s) | 356, 1347, 3090 |
| XhoI | CTCGAG | 1 cut(s) | 1778 |
| XmaI | CCCGGG | 2 cut(s) | 1540, 2944 |
| XmiI | GTMKAC | 1 cut(s) | 1743 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1097, 1851, 2115, 2784, 3175 |
| XspI | CTAG | 5 cut(s) | 258, 1641, 2447, 2570, 2687 |
| ZraI | GACGTC | 1 cut(s) | 2745 |
| Zsp2I | ATGCAT | 5 cut(s) | 388, 626, 1398, 1485, 1689 |