Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 193 - 297 | 8.1e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 341 - 534 | 3.2e-14 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 365 - 426 | 1.1e-08 | Leucine-rich repeat region |
| C-JID | PF20160 | 588 - 654 | 8.4e-14 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 64 |
| AccBSI | CCGCTC | 1 cut(s) | 1122 |
| AccIII | TCCGGA | 1 cut(s) | 1075 |
| AciI | CCGC | 5 cut(s) | 1085, 1122, 1380, 1483, 2127 |
| AclI | AACGTT | 2 cut(s) | 161, 1732 |
| AclWI | GGATC | 6 cut(s) | 161, 416, 965, 1602, 1618, 1816 |
| AcsI | RAATTY | 8 cut(s) | 667, 691, 746, 850, 1114, 1353, 1660, 1776 |
| AcuI | CTGAAG | 1 cut(s) | 1678 |
| AcvI | CACGTG | 1 cut(s) | 2026 |
| AdeI | CACNNNGTG | 1 cut(s) | 1262 |
| AfaI | GTAC | 1 cut(s) | 1981 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1839 |
| AflII | CTTAAG | 1 cut(s) | 1550 |
| AflIII | ACRYGT | 1 cut(s) | 2025 |
| AjnI | CCWGG | 2 cut(s) | 350, 432 |
| Alw21I | GWGCWC | 1 cut(s) | 1310 |
| AlwI | GGATC | 6 cut(s) | 161, 416, 965, 1602, 1618, 1816 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1111 |
| Aor13HI | TCCGGA | 1 cut(s) | 1075 |
| AoxI | GGCC | 1 cut(s) | 382 |
| ApeKI | GCWGC | 2 cut(s) | 95, 1335 |
| ApoI | RAATTY | 8 cut(s) | 667, 691, 746, 850, 1114, 1353, 1660, 1776 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1573, 1605 |
| AseI | ATTAAT | 1 cut(s) | 1757 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1353 |
| AspLEI | GCGC | 1 cut(s) | 2004 |
| AspS9I | GGNCC | 1 cut(s) | 430 |
| AsuC2I | CCSGG | 1 cut(s) | 1767 |
| AsuHPI | GGTGA | 4 cut(s) | 1274, 1360, 1859, 1964 |
| AsuII | TTCGAA | 1 cut(s) | 297 |
| AvaII | GGWCC | 1 cut(s) | 430 |
| BaeGI | GKGCMC | 2 cut(s) | 69, 930 |
| BanI | GGYRCC | 1 cut(s) | 64 |
| BbrPI | CACGTG | 1 cut(s) | 2026 |
| Bbv12I | GWGCWC | 1 cut(s) | 1310 |
| BbvI | GCAGC | 2 cut(s) | 107, 1322 |
| BccI | CCATC | 7 cut(s) | 316, 736, 796, 1442, 1516, 2074, 2110 |
| BceAI | ACGGC | 1 cut(s) | 1590 |
| BciT130I | CCWGG | 2 cut(s) | 352, 434 |
| BclI | TGATCA | 1 cut(s) | 1915 |
| BcnI | CCSGG | 1 cut(s) | 1767 |
| BfaI | CTAG | 1 cut(s) | 1517 |
| BfmI | CTRYAG | 4 cut(s) | 771, 835, 1057, 1103 |
| BfrI | CTTAAG | 1 cut(s) | 1550 |
| BglII | AGATCT | 2 cut(s) | 448, 1396 |
| BisI | GCNGC | 3 cut(s) | 96, 1336, 1484 |
| BlsI | GCNGC | 3 cut(s) | 97, 1337, 1485 |
| Bme1390I | CCNGG | 3 cut(s) | 352, 434, 1767 |
| Bme18I | GGWCC | 1 cut(s) | 430 |
| BmgT120I | GGNCC | 1 cut(s) | 430 |
| BmiI | GGNNCC | 3 cut(s) | 66, 1089, 1408 |
| BmrFI | CCNGG | 3 cut(s) | 352, 434, 1767 |
| BmsI | GCATC | 2 cut(s) | 250, 1675 |
| BpmI | CTGGAG | 2 cut(s) | 373, 1265 |
| Bpu14I | TTCGAA | 1 cut(s) | 297 |
| BpuEI | CTTGAG | 6 cut(s) | 156, 217, 266, 347, 1052, 1439 |
| BpuMI | CCSGG | 1 cut(s) | 1767 |
| BsaAI | YACGTR | 1 cut(s) | 2026 |
| BsaI | GGTCTC | 3 cut(s) | 804, 1412, 1457 |
| BsaJI | CCNNGG | 3 cut(s) | 350, 426, 1327 |
| BsaWI | WCCGGW | 1 cut(s) | 1075 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1411, 1441 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1839 |
| Bse1I | ACTGG | 2 cut(s) | 1248, 1499 |
| Bse3DI | GCAATG | 1 cut(s) | 1382 |
| BseAI | TCCGGA | 1 cut(s) | 1075 |
| BseBI | CCWGG | 2 cut(s) | 352, 434 |
| BseDI | CCNNGG | 3 cut(s) | 350, 426, 1327 |
| BseGI | GGATG | 2 cut(s) | 1534, 1687 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1839 |
| BseMI | GCAATG | 1 cut(s) | 1382 |
| BseMII | CTCAG | 3 cut(s) | 384, 965, 1454 |
| BseNI | ACTGG | 2 cut(s) | 1248, 1499 |
| BseSI | GKGCMC | 2 cut(s) | 69, 930 |
| BseXI | GCAGC | 2 cut(s) | 107, 1322 |
| BsgI | GTGCAG | 1 cut(s) | 1180 |
| BshFI | GGCC | 1 cut(s) | 384 |
| BshNI | GGYRCC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1310 |
| BsiSI | CCGG | 2 cut(s) | 1076, 1766 |
| BslFI | GGGAC | 2 cut(s) | 1138, 2008 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1839 |
| BsmFI | GGGAC | 2 cut(s) | 1138, 2008 |
| BsmI | GAATGC | 1 cut(s) | 192 |
| BsnI | GGCC | 1 cut(s) | 384 |
| Bso31I | GGTCTC | 3 cut(s) | 804, 1412, 1457 |
| Bsp119I | TTCGAA | 1 cut(s) | 297 |
| Bsp1286I | GDGCHC | 3 cut(s) | 69, 930, 1310 |
| Bsp13I | TCCGGA | 1 cut(s) | 1075 |
| Bsp19I | CCATGG | 1 cut(s) | 426 |
| BspACI | CCGC | 5 cut(s) | 1085, 1122, 1380, 1483, 2127 |
| BspANI | GGCC | 1 cut(s) | 384 |
| BspCNI | CTCAG | 3 cut(s) | 385, 966, 1455 |
| BspEI | TCCGGA | 1 cut(s) | 1075 |
| BspLI | GGNNCC | 3 cut(s) | 66, 1089, 1408 |
| BspMAI | CTGCAG | 1 cut(s) | 1107 |
| BspPI | GGATC | 6 cut(s) | 161, 416, 965, 1602, 1618, 1816 |
| BspT104I | TTCGAA | 1 cut(s) | 297 |
| BspT107I | GGYRCC | 1 cut(s) | 64 |
| BspTI | CTTAAG | 1 cut(s) | 1550 |
| BspTNI | GGTCTC | 3 cut(s) | 804, 1412, 1457 |
| BsrBI | CCGCTC | 1 cut(s) | 1122 |
| BsrDI | GCAATG | 1 cut(s) | 1382 |
| BsrI | ACTGG | 2 cut(s) | 1248, 1499 |
| BssECI | CCNNGG | 3 cut(s) | 350, 426, 1327 |
| BssT1I | CCWWGG | 1 cut(s) | 426 |
| Bst2UI | CCWGG | 2 cut(s) | 352, 434 |
| Bst4CI | ACNGT | 5 cut(s) | 133, 893, 925, 1268, 1558 |
| Bst6I | CTCTTC | 2 cut(s) | 1518, 1607 |
| BstAFI | CTTAAG | 1 cut(s) | 1550 |
| BstBAI | YACGTR | 1 cut(s) | 2026 |
| BstBI | TTCGAA | 1 cut(s) | 297 |
| BstC8I | GCNNGC | 2 cut(s) | 1481, 1642 |
| BstDEI | CTNAG | 7 cut(s) | 393, 416, 974, 1393, 1400, 1463, 1536 |
| BstDSI | CCRYGG | 1 cut(s) | 426 |
| BstF5I | GGATG | 2 cut(s) | 1534, 1687 |
| BstHHI | GCGC | 1 cut(s) | 2004 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 346, 1371, 1834 |
| BstNI | CCWGG | 2 cut(s) | 352, 434 |
| BstSCI | CCNGG | 3 cut(s) | 350, 432, 1765 |
| BstSFI | CTRYAG | 4 cut(s) | 771, 835, 1057, 1103 |
| BstSLI | GKGCMC | 2 cut(s) | 69, 930 |
| BstV1I | GCAGC | 2 cut(s) | 107, 1322 |
| BstX2I | RGATCY | 5 cut(s) | 166, 448, 1396, 1623, 1808 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 433, 795 |
| BstYI | RGATCY | 5 cut(s) | 166, 448, 1396, 1623, 1808 |
| BsuRI | GGCC | 1 cut(s) | 384 |
| BtgI | CCRYGG | 1 cut(s) | 426 |
| BtsCI | GGATG | 2 cut(s) | 1534, 1687 |
| BtsI | GCAGTG | 2 cut(s) | 829, 1192 |
| BtsIMutI | CAGTG | 5 cut(s) | 829, 930, 1192, 1506, 1575 |
| Cac8I | GCNNGC | 2 cut(s) | 1481, 1642 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1111 |
| CfoI | GCGC | 1 cut(s) | 2004 |
| Cfr13I | GGNCC | 1 cut(s) | 430 |
| CsiI | ACCWGGT | 1 cut(s) | 432 |
| Csp6I | GTAC | 1 cut(s) | 1980 |
| CviAII | CATG | 8 cut(s) | 32, 139, 427, 867, 943, 1411, 1543, 2051 |
| CviQI | GTAC | 1 cut(s) | 1980 |
| DdeI | CTNAG | 7 cut(s) | 393, 416, 974, 1393, 1400, 1463, 1536 |
| DraI | TTTAAA | 1 cut(s) | 1236 |
| DraIII | CACNNNGTG | 1 cut(s) | 1262 |
| Eam1104I | CTCTTC | 2 cut(s) | 1518, 1607 |
| EarI | CTCTTC | 2 cut(s) | 1518, 1607 |
| Eco130I | CCWWGG | 1 cut(s) | 426 |
| Eco31I | GGTCTC | 3 cut(s) | 804, 1412, 1457 |
| Eco47I | GGWCC | 1 cut(s) | 430 |
| Eco57I | CTGAAG | 1 cut(s) | 1678 |
| Eco72I | CACGTG | 1 cut(s) | 2026 |
| EcoRII | CCWGG | 2 cut(s) | 350, 432 |
| EcoT14I | CCWWGG | 1 cut(s) | 426 |
| EcoT22I | ATGCAT | 1 cut(s) | 192 |
| ErhI | CCWWGG | 1 cut(s) | 426 |
| FaeI | CATG | 8 cut(s) | 35, 142, 430, 870, 946, 1414, 1546, 2054 |
| FaqI | GGGAC | 2 cut(s) | 1138, 2008 |
| FatI | CATG | 8 cut(s) | 31, 138, 426, 866, 942, 1410, 1542, 2050 |
| FauI | CCCGC | 2 cut(s) | 1115, 1387 |
| FauNDI | CATATG | 1 cut(s) | 345 |
| FbaI | TGATCA | 1 cut(s) | 1915 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 1336, 1484 |
| FokI | GGATG | 2 cut(s) | 1541, 1694 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 1336, 1484 |
| FspBI | CTAG | 1 cut(s) | 1517 |
| GlaI | GCGC | 1 cut(s) | 2003 |
| GluI | GCNGC | 3 cut(s) | 96, 1336, 1484 |
| GsuI | CTGGAG | 2 cut(s) | 373, 1265 |
| HaeIII | GGCC | 1 cut(s) | 384 |
| HapII | CCGG | 2 cut(s) | 1076, 1766 |
| HhaI | GCGC | 1 cut(s) | 2004 |
| Hin1II | CATG | 8 cut(s) | 35, 142, 430, 870, 946, 1414, 1546, 2054 |
| Hin6I | GCGC | 1 cut(s) | 2002 |
| HinP1I | GCGC | 1 cut(s) | 2002 |
| HindIII | AAGCTT | 5 cut(s) | 174, 677, 809, 1274, 1826 |
| HpaII | CCGG | 2 cut(s) | 1076, 1766 |
| HphI | GGTGA | 4 cut(s) | 1274, 1360, 1859, 1964 |
| Hpy166II | GTNNAC | 3 cut(s) | 466, 1736, 2122 |
| Hpy188I | TCNGA | 9 cut(s) | 517, 612, 690, 957, 1113, 1331, 1464, 1697, 2062 |
| Hpy8I | GTNNAC | 3 cut(s) | 466, 1736, 2122 |
| HpyAV | CCTTC | 3 cut(s) | 70, 275, 2060 |
| HpyCH4III | ACNGT | 5 cut(s) | 133, 893, 925, 1268, 1558 |
| HpyCH4IV | ACGT | 5 cut(s) | 161, 1603, 1732, 2025, 2135 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 346, 1371, 1834 |
| HpyF3I | CTNAG | 7 cut(s) | 393, 416, 974, 1393, 1400, 1463, 1536 |
| HpySE526I | ACGT | 5 cut(s) | 161, 1603, 1732, 2025, 2135 |
| Hsp92II | CATG | 8 cut(s) | 35, 142, 430, 870, 946, 1414, 1546, 2054 |
| HspAI | GCGC | 1 cut(s) | 2002 |
| Kpn2I | TCCGGA | 1 cut(s) | 1075 |
| Ksp22I | TGATCA | 1 cut(s) | 1915 |
| LmnI | GCTCC | 2 cut(s) | 354, 1087 |
| Lsp1109I | GCAGC | 2 cut(s) | 107, 1322 |
| LweI | GCATC | 2 cut(s) | 250, 1675 |
| MabI | ACCWGGT | 1 cut(s) | 432 |
| MaeI | CTAG | 1 cut(s) | 1517 |
| MaeII | ACGT | 5 cut(s) | 161, 1603, 1732, 2025, 2135 |
| MaeIII | GTNAC | 6 cut(s) | 287, 419, 533, 1262, 1570, 1670 |
| MbiI | CCGCTC | 1 cut(s) | 1122 |
| MflI | RGATCY | 5 cut(s) | 166, 448, 1396, 1623, 1808 |
| MhlI | GDGCHC | 3 cut(s) | 69, 930, 1310 |
| MlyI | GAGTC | 3 cut(s) | 195, 538, 946 |
| MmeI | TCCRAC | 1 cut(s) | 1506 |
| Mph1103I | ATGCAT | 1 cut(s) | 192 |
| MroI | TCCGGA | 1 cut(s) | 1075 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1353 |
| MslI | CAYNNNNRTG | 4 cut(s) | 185, 947, 1759, 1923 |
| MspCI | CTTAAG | 1 cut(s) | 1550 |
| MspI | CCGG | 2 cut(s) | 1076, 1766 |
| MspR9I | CCNGG | 3 cut(s) | 352, 434, 1767 |
| Mva1269I | GAATGC | 1 cut(s) | 192 |
| MvaI | CCWGG | 2 cut(s) | 352, 434 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 346, 1371, 1834 |
| NciI | CCSGG | 1 cut(s) | 1767 |
| NcoI | CCATGG | 1 cut(s) | 426 |
| NdeI | CATATG | 1 cut(s) | 345 |
| NlaIII | CATG | 8 cut(s) | 35, 142, 430, 870, 946, 1414, 1546, 2054 |
| NlaIV | GGNNCC | 3 cut(s) | 66, 1089, 1408 |
| NmuCI | GTSAC | 2 cut(s) | 1262, 1570 |
| NsiI | ATGCAT | 1 cut(s) | 192 |
| NspV | TTCGAA | 1 cut(s) | 297 |
| PctI | GAATGC | 1 cut(s) | 192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1353 |
| PfeI | GAWTC | 8 cut(s) | 80, 116, 299, 388, 823, 1159, 1850, 1933 |
| PflFI | GACNNNGTC | 2 cut(s) | 1268, 1558 |
| PfoI | TCCNGGA | 1 cut(s) | 1765 |
| PkrI | GCNGC | 3 cut(s) | 97, 1337, 1485 |
| PleI | GAGTC | 3 cut(s) | 195, 537, 946 |
| PmaCI | CACGTG | 1 cut(s) | 2026 |
| PmlI | CACGTG | 1 cut(s) | 2026 |
| PpsI | GAGTC | 3 cut(s) | 195, 537, 946 |
| Ppu21I | YACGTR | 1 cut(s) | 2026 |
| PshBI | ATTAAT | 1 cut(s) | 1757 |
| Psp1406I | AACGTT | 2 cut(s) | 161, 1732 |
| Psp6I | CCWGG | 2 cut(s) | 350, 432 |
| PspCI | CACGTG | 1 cut(s) | 2026 |
| PspGI | CCWGG | 2 cut(s) | 350, 432 |
| PspN4I | GGNNCC | 3 cut(s) | 66, 1089, 1408 |
| PspPI | GGNCC | 1 cut(s) | 430 |
| PstI | CTGCAG | 1 cut(s) | 1107 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1111 |
| PsuI | RGATCY | 5 cut(s) | 166, 448, 1396, 1623, 1808 |
| PsyI | GACNNNGTC | 2 cut(s) | 1268, 1558 |
| RsaI | GTAC | 1 cut(s) | 1981 |
| RsaNI | GTAC | 1 cut(s) | 1980 |
| RseI | CAYNNNNRTG | 4 cut(s) | 185, 947, 1759, 1923 |
| SatI | GCNGC | 3 cut(s) | 96, 1336, 1484 |
| Sau96I | GGNCC | 1 cut(s) | 430 |
| SchI | GAGTC | 3 cut(s) | 195, 538, 946 |
| ScrFI | CCNGG | 3 cut(s) | 352, 434, 1767 |
| SduI | GDGCHC | 3 cut(s) | 69, 930, 1310 |
| SexAI | ACCWGGT | 1 cut(s) | 432 |
| SfaNI | GCATC | 2 cut(s) | 250, 1675 |
| SfcI | CTRYAG | 4 cut(s) | 771, 835, 1057, 1103 |
| SfuI | TTCGAA | 1 cut(s) | 297 |
| SinI | GGWCC | 1 cut(s) | 430 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 185, 947, 1759, 1923 |
| SmlI | CTYRAG | 7 cut(s) | 171, 196, 245, 362, 1031, 1454, 1550 |
| SmoI | CTYRAG | 7 cut(s) | 171, 196, 245, 362, 1031, 1454, 1550 |
| SsiI | CCGC | 5 cut(s) | 1085, 1122, 1380, 1483, 2127 |
| SspI | AATATT | 2 cut(s) | 607, 1822 |
| SspMI | CTAG | 1 cut(s) | 1517 |
| StyD4I | CCNGG | 3 cut(s) | 350, 432, 1765 |
| StyI | CCWWGG | 1 cut(s) | 426 |
| TaaI | ACNGT | 5 cut(s) | 133, 893, 925, 1268, 1558 |
| TaiI | ACGT | 5 cut(s) | 164, 1606, 1735, 2028, 2138 |
| TaqI | TCGA | 7 cut(s) | 268, 297, 707, 857, 2078, 2094, 2114 |
| TatI | WGTACW | 1 cut(s) | 1979 |
| TauI | GCSGC | 1 cut(s) | 1486 |
| TfiI | GAWTC | 8 cut(s) | 80, 116, 299, 388, 823, 1159, 1850, 1933 |
| TscAI | CASTG | 5 cut(s) | 836, 930, 1199, 1506, 1575 |
| TseFI | GTSAC | 2 cut(s) | 1262, 1570 |
| TseI | GCWGC | 2 cut(s) | 95, 1335 |
| Tsp45I | GTSAC | 2 cut(s) | 1262, 1570 |
| TspGWI | ACGGA | 3 cut(s) | 71, 645, 1817 |
| TspRI | CASTG | 5 cut(s) | 836, 930, 1199, 1506, 1575 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1268, 1558 |
| Vha464I | CTTAAG | 1 cut(s) | 1550 |
| VpaK11BI | GGWCC | 1 cut(s) | 430 |
| VspI | ATTAAT | 1 cut(s) | 1757 |
| XapI | RAATTY | 8 cut(s) | 667, 691, 746, 850, 1114, 1353, 1660, 1776 |
| XbaI | TCTAGA | 1 cut(s) | 1516 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1353 |
| XspI | CTAG | 1 cut(s) | 1517 |
| Zsp2I | ATGCAT | 1 cut(s) | 192 |