RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 191 | 4.8e-56 | TIR domain |
| TIR_2 | PF13676 | 18 - 114 | 1e-13 | TIR domain |
| NB-ARC | PF00931 | 210 - 366 | 9.8e-17 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 441 - 508 | 9.4e-18 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 733 - 843 | 1.1e-10 | Leucine-rich repeat region |
| C-JID | PF20160 | 1015 - 1159 | 5.9e-11 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1046 |
| AarI | CACCTGC | 1 cut(s) | 187 |
| Acc16I | TGCGCA | 1 cut(s) | 33 |
| Acc36I | ACCTGC | 2 cut(s) | 187, 2196 |
| AccB1I | GGYRCC | 1 cut(s) | 3356 |
| AccII | CGCG | 1 cut(s) | 537 |
| AciI | CCGC | 3 cut(s) | 535, 1172, 1418 |
| AclWI | GGATC | 4 cut(s) | 833, 1036, 2907, 3122 |
| AcsI | RAATTY | 5 cut(s) | 1194, 1265, 1703, 2055, 3054 |
| AcuI | CTGAAG | 4 cut(s) | 1070, 1730, 3144, 3311 |
| AdeI | CACNNNGTG | 1 cut(s) | 3304 |
| AfaI | GTAC | 5 cut(s) | 348, 1161, 1694, 3271, 3317 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 358, 2721, 3307, 3331, 3353 |
| AflIII | ACRYGT | 3 cut(s) | 343, 1951, 3191 |
| AgeI | ACCGGT | 1 cut(s) | 3353 |
| AjiI | CACGTC | 1 cut(s) | 1954 |
| AjnI | CCWGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 918, 950 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1419, 1451 |
| Alw21I | GWGCWC | 2 cut(s) | 417, 1229 |
| Alw26I | GTCTC | 7 cut(s) | 356, 1455, 1906, 2211, 2354, 2405, 2429 |
| Alw44I | GTGCAC | 1 cut(s) | 413 |
| AlwI | GGATC | 4 cut(s) | 833, 1036, 2907, 3122 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2640, 2867 |
| Ama87I | CYCGRG | 2 cut(s) | 593, 3431 |
| AoxI | GGCC | 6 cut(s) | 1185, 1677, 1826, 1927, 2609, 3478 |
| ApaLI | GTGCAC | 1 cut(s) | 413 |
| ApeKI | GCWGC | 8 cut(s) | 5, 371, 374, 1122, 1169, 1975, 2542, 2844 |
| ApoI | RAATTY | 5 cut(s) | 1194, 1265, 1703, 2055, 3054 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2379, 2411 |
| AsiGI | ACCGGT | 1 cut(s) | 3353 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 624, 1083, 1265, 1620, 1760, 1797, 2076 |
| AspA2I | CCTAGG | 1 cut(s) | 1937 |
| AspLEI | GCGC | 4 cut(s) | 34, 539, 1557, 2790 |
| AspS9I | GGNCC | 3 cut(s) | 956, 1186, 3339 |
| AsuHPI | GGTGA | 6 cut(s) | 83, 950, 3239, 3290, 3346, 3454 |
| AsuII | TTCGAA | 2 cut(s) | 1841, 2466 |
| AvaI | CYCGRG | 2 cut(s) | 593, 3431 |
| AvaII | GGWCC | 2 cut(s) | 956, 3339 |
| AvrII | CCTAGG | 1 cut(s) | 1937 |
| AxyI | CCTNAGG | 1 cut(s) | 1674 |
| BaeGI | GKGCMC | 1 cut(s) | 417 |
| BanI | GGYRCC | 1 cut(s) | 3356 |
| BauI | CACGAG | 1 cut(s) | 873 |
| BbsI | GAAGAC | 3 cut(s) | 2190, 2864, 3149 |
| Bbv12I | GWGCWC | 2 cut(s) | 417, 1229 |
| BbvCI | CCTCAGC | 1 cut(s) | 2759 |
| BbvI | GCAGC | 7 cut(s) | 361, 383, 1109, 1156, 1987, 2529, 2831 |
| BccI | CCATC | 5 cut(s) | 844, 1506, 1861, 2444, 2747 |
| BceAI | ACGGC | 1 cut(s) | 1542 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1821, 1831, 1855, 1865, 2605, 2639 |
| BciT130I | CCWGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| BciVI | GTATCC | 1 cut(s) | 1730 |
| BclI | TGATCA | 2 cut(s) | 940, 1132 |
| BcoDI | GTCTC | 7 cut(s) | 356, 1455, 1906, 2211, 2354, 2405, 2429 |
| BfaI | CTAG | 8 cut(s) | 233, 452, 984, 1067, 1938, 2447, 2460, 2627 |
| BfmI | CTRYAG | 3 cut(s) | 1123, 1866, 3265 |
| BfoI | RGCGCY | 2 cut(s) | 1558, 2791 |
| BfuAI | ACCTGC | 2 cut(s) | 187, 2196 |
| BfuI | GTATCC | 1 cut(s) | 1730 |
| BglII | AGATCT | 4 cut(s) | 1786, 1993, 2426, 2481 |
| BisI | GCNGC | 9 cut(s) | 6, 372, 375, 535, 1123, 1170, 1976, 2543, 2845 |
| BlnI | CCTAGG | 1 cut(s) | 1937 |
| BlsI | GCNGC | 9 cut(s) | 7, 373, 376, 536, 1124, 1171, 1977, 2544, 2846 |
| Bme1390I | CCNGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| Bme18I | GGWCC | 2 cut(s) | 956, 3339 |
| BmeT110I | CYCGRG | 2 cut(s) | 593, 3431 |
| BmgBI | CACGTC | 1 cut(s) | 1954 |
| BmgT120I | GGNCC | 3 cut(s) | 956, 1186, 3339 |
| BmiI | GGNNCC | 5 cut(s) | 1204, 2490, 2527, 2713, 3358 |
| BmrFI | CCNGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1584 |
| BpiI | GAAGAC | 3 cut(s) | 2190, 2864, 3149 |
| BpmI | CTGGAG | 2 cut(s) | 1892, 2525 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2759 |
| Bpu14I | TTCGAA | 2 cut(s) | 1841, 2466 |
| BpuEI | CTTGAG | 4 cut(s) | 2193, 2453, 3348, 3459 |
| BsaBI | GATNNNNATC | 3 cut(s) | 993, 2985, 3098 |
| BsaI | GGTCTC | 2 cut(s) | 2211, 2429 |
| BsaJI | CCNNGG | 4 cut(s) | 1182, 1572, 1751, 1937 |
| BsaWI | WCCGGW | 1 cut(s) | 3353 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2793, 2823 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 358, 2721, 3307, 3331, 3353 |
| Bse118I | RCCGGY | 1 cut(s) | 3353 |
| Bse1I | ACTGG | 1 cut(s) | 96 |
| Bse21I | CCTNAGG | 1 cut(s) | 1674 |
| Bse8I | GATNNNNATC | 3 cut(s) | 993, 2985, 3098 |
| BseBI | CCWGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| BseDI | CCNNGG | 4 cut(s) | 1182, 1572, 1751, 1937 |
| BseJI | GATNNNNATC | 3 cut(s) | 993, 2985, 3098 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 358, 2721, 3307, 3331, 3353 |
| BseMII | CTCAG | 9 cut(s) | 1661, 1688, 1834, 1872, 1975, 2145, 2469, 2647, 2750 |
| BseNI | ACTGG | 1 cut(s) | 96 |
| BseRI | GAGGAG | 5 cut(s) | 12, 15, 177, 1662, 2977 |
| BseSI | GKGCMC | 1 cut(s) | 417 |
| BseXI | GCAGC | 7 cut(s) | 361, 383, 1109, 1156, 1987, 2529, 2831 |
| BseYI | CCCAGC | 1 cut(s) | 455 |
| BsgI | GTGCAG | 3 cut(s) | 293, 2626, 2865 |
| Bsh1236I | CGCG | 1 cut(s) | 537 |
| BshFI | GGCC | 6 cut(s) | 1187, 1679, 1828, 1929, 2611, 3480 |
| BshNI | GGYRCC | 1 cut(s) | 3356 |
| BshTI | ACCGGT | 1 cut(s) | 3353 |
| BsiHKAI | GWGCWC | 2 cut(s) | 417, 1229 |
| BsiHKCI | CYCGRG | 2 cut(s) | 593, 3431 |
| BsiSI | CCGG | 1 cut(s) | 3354 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 358, 2721, 3307, 3331, 3353 |
| BsmAI | GTCTC | 7 cut(s) | 356, 1455, 1906, 2211, 2354, 2405, 2429 |
| BsmI | GAATGC | 2 cut(s) | 290, 2962 |
| BsnI | GGCC | 6 cut(s) | 1187, 1679, 1828, 1929, 2611, 3480 |
| Bso31I | GGTCTC | 2 cut(s) | 2211, 2429 |
| BsoBI | CYCGRG | 2 cut(s) | 593, 3431 |
| Bsp119I | TTCGAA | 2 cut(s) | 1841, 2466 |
| Bsp1286I | GDGCHC | 2 cut(s) | 417, 1229 |
| Bsp1407I | TGTACA | 1 cut(s) | 1692 |
| Bsp19I | CCATGG | 1 cut(s) | 1572 |
| BspACI | CCGC | 3 cut(s) | 535, 1172, 1418 |
| BspANI | GGCC | 6 cut(s) | 1187, 1679, 1828, 1929, 2611, 3480 |
| BspCNI | CTCAG | 9 cut(s) | 1660, 1687, 1833, 1873, 1974, 2144, 2470, 2646, 2751 |
| BspFNI | CGCG | 1 cut(s) | 537 |
| BspHI | TCATGA | 1 cut(s) | 1072 |
| BspLI | GGNNCC | 5 cut(s) | 1204, 2490, 2527, 2713, 3358 |
| BspMAI | CTGCAG | 2 cut(s) | 1127, 1870 |
| BspMI | ACCTGC | 2 cut(s) | 187, 2196 |
| BspPI | GGATC | 4 cut(s) | 833, 1036, 2907, 3122 |
| BspQI | GCTCTTC | 1 cut(s) | 1097 |
| BspT104I | TTCGAA | 2 cut(s) | 1841, 2466 |
| BspT107I | GGYRCC | 1 cut(s) | 3356 |
| BspTNI | GGTCTC | 2 cut(s) | 2211, 2429 |
| BsrFI | RCCGGY | 1 cut(s) | 3353 |
| BsrGI | TGTACA | 1 cut(s) | 1692 |
| BsrI | ACTGG | 1 cut(s) | 96 |
| BssAI | RCCGGY | 1 cut(s) | 3353 |
| BssECI | CCNNGG | 4 cut(s) | 1182, 1572, 1751, 1937 |
| BssSI | CACGAG | 1 cut(s) | 873 |
| BssT1I | CCWWGG | 3 cut(s) | 1182, 1572, 1937 |
| Bst2BI | CACGAG | 1 cut(s) | 873 |
| Bst2UI | CCWGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| Bst4CI | ACNGT | 3 cut(s) | 640, 1475, 2863 |
| Bst6I | CTCTTC | 1 cut(s) | 1097 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1018, 3185 |
| BstAUI | TGTACA | 1 cut(s) | 1692 |
| BstBI | TTCGAA | 2 cut(s) | 1841, 2466 |
| BstC8I | GCNNGC | 4 cut(s) | 36, 1826, 1830, 2786 |
| BstDSI | CCRYGG | 1 cut(s) | 1572 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3329 |
| BstFNI | CGCG | 1 cut(s) | 537 |
| BstH2I | RGCGCY | 2 cut(s) | 1558, 2791 |
| BstHHI | GCGC | 4 cut(s) | 34, 539, 1557, 2790 |
| BstMAI | GTCTC | 7 cut(s) | 356, 1455, 1906, 2211, 2354, 2405, 2429 |
| BstNI | CCWGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| BstNSI | RCATGY | 5 cut(s) | 38, 347, 543, 1407, 3195 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1584 |
| BstSCI | CCNGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| BstSFI | CTRYAG | 3 cut(s) | 1123, 1866, 3265 |
| BstSLI | GKGCMC | 1 cut(s) | 417 |
| BstUI | CGCG | 1 cut(s) | 537 |
| BstV1I | GCAGC | 7 cut(s) | 361, 383, 1109, 1156, 1987, 2529, 2831 |
| BstV2I | GAAGAC | 3 cut(s) | 2190, 2864, 3149 |
| BstX2I | RGATCY | 5 cut(s) | 1786, 1993, 2426, 2481, 3127 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1978 |
| BstYI | RGATCY | 5 cut(s) | 1786, 1993, 2426, 2481, 3127 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1674 |
| BsuI | GTATCC | 1 cut(s) | 1730 |
| BsuRI | GGCC | 6 cut(s) | 1187, 1679, 1828, 1929, 2611, 3480 |
| BtgI | CCRYGG | 1 cut(s) | 1572 |
| BtrI | CACGTC | 1 cut(s) | 1954 |
| BtsI | GCAGTG | 1 cut(s) | 1387 |
| BtsIMutI | CAGTG | 3 cut(s) | 636, 1387, 2641 |
| BveI | ACCTGC | 2 cut(s) | 187, 2196 |
| Cac8I | GCNNGC | 4 cut(s) | 36, 1826, 1830, 2786 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2640, 2867 |
| CciI | TCATGA | 1 cut(s) | 1072 |
| CfoI | GCGC | 4 cut(s) | 34, 539, 1557, 2790 |
| Cfr10I | RCCGGY | 1 cut(s) | 3353 |
| Cfr13I | GGNCC | 3 cut(s) | 956, 1186, 3339 |
| CseI | GACGC | 1 cut(s) | 728 |
| CsiI | ACCWGGT | 1 cut(s) | 3300 |
| Csp6I | GTAC | 5 cut(s) | 347, 1160, 1693, 3270, 3316 |
| CspAI | ACCGGT | 1 cut(s) | 3353 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3048, 3083 |
| CviQI | GTAC | 5 cut(s) | 347, 1160, 1693, 3270, 3316 |
| DraI | TTTAAA | 1 cut(s) | 555 |
| DraIII | CACNNNGTG | 1 cut(s) | 3304 |
| Eam1104I | CTCTTC | 1 cut(s) | 1097 |
| EarI | CTCTTC | 1 cut(s) | 1097 |
| Eco130I | CCWWGG | 3 cut(s) | 1182, 1572, 1937 |
| Eco147I | AGGCCT | 1 cut(s) | 1679 |
| Eco31I | GGTCTC | 2 cut(s) | 2211, 2429 |
| Eco32I | GATATC | 2 cut(s) | 2909, 3100 |
| Eco47I | GGWCC | 2 cut(s) | 956, 3339 |
| Eco57I | CTGAAG | 4 cut(s) | 1070, 1730, 3144, 3311 |
| Eco81I | CCTNAGG | 1 cut(s) | 1674 |
| Eco88I | CYCGRG | 2 cut(s) | 593, 3431 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3329 |
| EcoRII | CCWGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| EcoRV | GATATC | 2 cut(s) | 2909, 3100 |
| EcoT14I | CCWWGG | 3 cut(s) | 1182, 1572, 1937 |
| EcoT22I | ATGCAT | 5 cut(s) | 611, 996, 1315, 1405, 1491 |
| ErhI | CCWWGG | 3 cut(s) | 1182, 1572, 1937 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2202, 2234, 2896, 2928 |
| FauI | CCCGC | 1 cut(s) | 1165 |
| FbaI | TGATCA | 2 cut(s) | 940, 1132 |
| Fnu4HI | GCNGC | 9 cut(s) | 6, 372, 375, 535, 1123, 1170, 1976, 2543, 2845 |
| Fsp4HI | GCNGC | 9 cut(s) | 6, 372, 375, 535, 1123, 1170, 1976, 2543, 2845 |
| FspBI | CTAG | 8 cut(s) | 233, 452, 984, 1067, 1938, 2447, 2460, 2627 |
| FspI | TGCGCA | 1 cut(s) | 33 |
| GlaI | GCGC | 4 cut(s) | 33, 538, 1556, 2789 |
| GluI | GCNGC | 9 cut(s) | 6, 372, 375, 535, 1123, 1170, 1976, 2543, 2845 |
| GsaI | CCCAGC | 1 cut(s) | 459 |
| GsuI | CTGGAG | 2 cut(s) | 1892, 2525 |
| HaeII | RGCGCY | 2 cut(s) | 1558, 2791 |
| HaeIII | GGCC | 6 cut(s) | 1187, 1679, 1828, 1929, 2611, 3480 |
| HapII | CCGG | 1 cut(s) | 3354 |
| HgaI | GACGC | 1 cut(s) | 728 |
| HhaI | GCGC | 4 cut(s) | 34, 539, 1557, 2790 |
| Hin6I | GCGC | 4 cut(s) | 32, 537, 1555, 2788 |
| HinP1I | GCGC | 4 cut(s) | 32, 537, 1555, 2788 |
| HincII | GTYRAC | 1 cut(s) | 3166 |
| HindII | GTYRAC | 1 cut(s) | 3166 |
| HindIII | AAGCTT | 4 cut(s) | 209, 2084, 2944, 3413 |
| HpaII | CCGG | 1 cut(s) | 3354 |
| HphI | GGTGA | 6 cut(s) | 83, 950, 3239, 3290, 3346, 3454 |
| Hpy166II | GTNNAC | 8 cut(s) | 415, 1529, 1569, 2011, 2874, 3166, 3342, 3402 |
| Hpy8I | GTNNAC | 8 cut(s) | 415, 1529, 1569, 2011, 2874, 3166, 3342, 3402 |
| Hpy99I | CGWCG | 2 cut(s) | 1958, 2599 |
| HpyCH4III | ACNGT | 3 cut(s) | 640, 1475, 2863 |
| HpyCH4IV | ACGT | 3 cut(s) | 1162, 1953, 2562 |
| HpySE526I | ACGT | 3 cut(s) | 1162, 1953, 2562 |
| HspAI | GCGC | 4 cut(s) | 32, 537, 1555, 2788 |
| Ksp22I | TGATCA | 2 cut(s) | 940, 1132 |
| LguI | GCTCTTC | 1 cut(s) | 1097 |
| LmnI | GCTCC | 3 cut(s) | 2488, 2724, 2814 |
| Lsp1109I | GCAGC | 7 cut(s) | 361, 383, 1109, 1156, 1987, 2529, 2831 |
| MabI | ACCWGGT | 1 cut(s) | 3300 |
| MaeI | CTAG | 8 cut(s) | 233, 452, 984, 1067, 1938, 2447, 2460, 2627 |
| MaeII | ACGT | 3 cut(s) | 1162, 1953, 2562 |
| MaeIII | GTNAC | 6 cut(s) | 83, 228, 520, 1475, 1964, 2636 |
| MfeI | CAATTG | 2 cut(s) | 195, 1518 |
| MflI | RGATCY | 5 cut(s) | 1786, 1993, 2426, 2481, 3127 |
| MhlI | GDGCHC | 2 cut(s) | 417, 1229 |
| MlyI | GAGTC | 4 cut(s) | 605, 696, 1908, 2518 |
| MmeI | TCCRAC | 2 cut(s) | 547, 2150 |
| Mph1103I | ATGCAT | 5 cut(s) | 611, 996, 1315, 1405, 1491 |
| MroXI | GAANNNNTTC | 7 cut(s) | 624, 1083, 1265, 1620, 1760, 1797, 2076 |
| MslI | CAYNNNNRTG | 3 cut(s) | 604, 1101, 2276 |
| MspA1I | CMGCKG | 4 cut(s) | 374, 1122, 1824, 1978 |
| MspI | CCGG | 1 cut(s) | 3354 |
| MspR9I | CCNGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| MunI | CAATTG | 2 cut(s) | 195, 1518 |
| Mva1269I | GAATGC | 2 cut(s) | 290, 2962 |
| MvaI | CCWGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| MvnI | CGCG | 1 cut(s) | 537 |
| NcoI | CCATGG | 1 cut(s) | 1572 |
| NlaIV | GGNNCC | 5 cut(s) | 1204, 2490, 2527, 2713, 3358 |
| NmeAIII | GCCGAG | 1 cut(s) | 2734 |
| NmuCI | GTSAC | 4 cut(s) | 228, 520, 1964, 2636 |
| NsbI | TGCGCA | 1 cut(s) | 33 |
| NsiI | ATGCAT | 5 cut(s) | 611, 996, 1315, 1405, 1491 |
| NspI | RCATGY | 5 cut(s) | 38, 347, 543, 1407, 3195 |
| NspV | TTCGAA | 2 cut(s) | 1841, 2466 |
| PaeI | GCATGC | 1 cut(s) | 38 |
| PaeR7I | CTCGAG | 2 cut(s) | 593, 3431 |
| PagI | TCATGA | 1 cut(s) | 1072 |
| PaqCI | CACCTGC | 1 cut(s) | 187 |
| PceI | AGGCCT | 1 cut(s) | 1679 |
| PciI | ACATGT | 2 cut(s) | 343, 3191 |
| PciSI | GCTCTTC | 1 cut(s) | 1097 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1437 |
| PctI | GAATGC | 2 cut(s) | 290, 2962 |
| PdmI | GAANNNNTTC | 7 cut(s) | 624, 1083, 1265, 1620, 1760, 1797, 2076 |
| PinAI | ACCGGT | 1 cut(s) | 3353 |
| PkrI | GCNGC | 9 cut(s) | 7, 373, 376, 536, 1124, 1171, 1977, 2544, 2846 |
| PleI | GAGTC | 4 cut(s) | 604, 696, 1908, 2517 |
| PpsI | GAGTC | 4 cut(s) | 604, 696, 1908, 2517 |
| PscI | ACATGT | 2 cut(s) | 343, 3191 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1584 |
| PsiI | TTATAA | 1 cut(s) | 1046 |
| Psp6I | CCWGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| PspFI | CCCAGC | 1 cut(s) | 455 |
| PspGI | CCWGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| PspN4I | GGNNCC | 5 cut(s) | 1204, 2490, 2527, 2713, 3358 |
| PspPI | GGNCC | 3 cut(s) | 956, 1186, 3339 |
| PspXI | VCTCGAGB | 2 cut(s) | 593, 3431 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 609, 641 |
| PstI | CTGCAG | 2 cut(s) | 1127, 1870 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2640, 2867 |
| PsuI | RGATCY | 5 cut(s) | 1786, 1993, 2426, 2481, 3127 |
| PvuII | CAGCTG | 4 cut(s) | 374, 1122, 1824, 1978 |
| RsaI | GTAC | 5 cut(s) | 348, 1161, 1694, 3271, 3317 |
| RsaNI | GTAC | 5 cut(s) | 347, 1160, 1693, 3270, 3316 |
| RseI | CAYNNNNRTG | 3 cut(s) | 604, 1101, 2276 |
| SapI | GCTCTTC | 1 cut(s) | 1097 |
| SatI | GCNGC | 9 cut(s) | 6, 372, 375, 535, 1123, 1170, 1976, 2543, 2845 |
| Sau96I | GGNCC | 3 cut(s) | 956, 1186, 3339 |
| SchI | GAGTC | 4 cut(s) | 605, 696, 1908, 2518 |
| ScrFI | CCNGG | 4 cut(s) | 960, 1548, 1896, 3302 |
| SduI | GDGCHC | 2 cut(s) | 417, 1229 |
| SexAI | ACCWGGT | 1 cut(s) | 3300 |
| SfcI | CTRYAG | 3 cut(s) | 1123, 1866, 3265 |
| Sfr274I | CTCGAG | 2 cut(s) | 593, 3431 |
| SfuI | TTCGAA | 2 cut(s) | 1841, 2466 |
| SinI | GGWCC | 2 cut(s) | 956, 3339 |
| SlaI | CTCGAG | 2 cut(s) | 593, 3431 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 604, 1101, 2276 |
| SmlI | CTYRAG | 6 cut(s) | 593, 2208, 2432, 3363, 3431, 3474 |
| SmoI | CTYRAG | 6 cut(s) | 593, 2208, 2432, 3363, 3431, 3474 |
| SphI | GCATGC | 1 cut(s) | 38 |
| SseBI | AGGCCT | 1 cut(s) | 1679 |
| SsiI | CCGC | 3 cut(s) | 535, 1172, 1418 |
| SspI | AATATT | 1 cut(s) | 1847 |
| SspMI | CTAG | 8 cut(s) | 233, 452, 984, 1067, 1938, 2447, 2460, 2627 |
| StuI | AGGCCT | 1 cut(s) | 1679 |
| StyD4I | CCNGG | 4 cut(s) | 958, 1546, 1894, 3300 |
| StyI | CCWWGG | 3 cut(s) | 1182, 1572, 1937 |
| TaaI | ACNGT | 3 cut(s) | 640, 1475, 2863 |
| TaiI | ACGT | 3 cut(s) | 1165, 1956, 2565 |
| TaqII | GACCGA | 1 cut(s) | 2587 |
| TatI | WGTACW | 1 cut(s) | 1692 |
| TauI | GCSGC | 1 cut(s) | 537 |
| TscAI | CASTG | 3 cut(s) | 643, 1387, 2641 |
| TseFI | GTSAC | 4 cut(s) | 228, 520, 1964, 2636 |
| TseI | GCWGC | 8 cut(s) | 5, 371, 374, 1122, 1169, 1975, 2542, 2844 |
| Tsp45I | GTSAC | 4 cut(s) | 228, 520, 1964, 2636 |
| TspGWI | ACGGA | 1 cut(s) | 3161 |
| TspRI | CASTG | 3 cut(s) | 643, 1387, 2641 |
| VneI | GTGCAC | 1 cut(s) | 413 |
| VpaK11BI | GGWCC | 2 cut(s) | 956, 3339 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3329 |
| XapI | RAATTY | 5 cut(s) | 1194, 1265, 1703, 2055, 3054 |
| XbaI | TCTAGA | 1 cut(s) | 2446 |
| XceI | RCATGY | 5 cut(s) | 38, 347, 543, 1407, 3195 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2271 |
| XhoI | CTCGAG | 2 cut(s) | 593, 3431 |
| XmaJI | CCTAGG | 1 cut(s) | 1937 |
| XmnI | GAANNNNTTC | 7 cut(s) | 624, 1083, 1265, 1620, 1760, 1797, 2076 |
| XspI | CTAG | 8 cut(s) | 233, 452, 984, 1067, 1938, 2447, 2460, 2627 |
| Zsp2I | ATGCAT | 5 cut(s) | 611, 996, 1315, 1405, 1491 |