TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WHD_ROQ1 | PF23282 | 22 - 90 | 1.5e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 327 - 401 | 4.4e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 392 - 585 | 1.4e-16 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 398 - 495 | 1.3e-11 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1588 |
| AccB1I | GGYRCC | 1 cut(s) | 1240 |
| AccII | CGCG | 1 cut(s) | 264 |
| AccIII | TCCGGA | 2 cut(s) | 823, 1569 |
| AciI | CCGC | 3 cut(s) | 161, 963, 1281 |
| AclI | AACGTT | 1 cut(s) | 483 |
| AclWI | GGATC | 3 cut(s) | 657, 736, 1561 |
| AcoI | YGGCCR | 1 cut(s) | 247 |
| AcsI | RAATTY | 5 cut(s) | 8, 551, 747, 1177, 1214 |
| AcuI | CTGAAG | 5 cut(s) | 696, 929, 1310, 1379, 1382 |
| AcyI | GRCGYC | 1 cut(s) | 1241 |
| AfaI | GTAC | 2 cut(s) | 126, 330 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 962, 1569, 1719 |
| AflIII | ACRYGT | 1 cut(s) | 378 |
| AgeI | ACCGGT | 1 cut(s) | 1344 |
| AjnI | CCWGG | 3 cut(s) | 515, 792, 832 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 156, 188 |
| Alw21I | GWGCWC | 3 cut(s) | 1254, 1466, 1659 |
| Alw26I | GTCTC | 4 cut(s) | 104, 1058, 1157, 1183 |
| AlwI | GGATC | 3 cut(s) | 657, 736, 1561 |
| Aor13HI | TCCGGA | 2 cut(s) | 823, 1569 |
| AoxI | GGCC | 2 cut(s) | 247, 619 |
| ApeKI | GCWGC | 3 cut(s) | 158, 1002, 1639 |
| ApoI | RAATTY | 5 cut(s) | 8, 551, 747, 1177, 1214 |
| AsiGI | ACCGGT | 1 cut(s) | 1344 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 258 |
| AspLEI | GCGC | 2 cut(s) | 1243, 1729 |
| AspS9I | GGNCC | 4 cut(s) | 235, 392, 940, 1549 |
| AsuC2I | CCSGG | 3 cut(s) | 251, 285, 1451 |
| AsuHPI | GGTGA | 2 cut(s) | 655, 1508 |
| AsuII | TTCGAA | 1 cut(s) | 580 |
| AvaII | GGWCC | 4 cut(s) | 235, 392, 940, 1549 |
| BanI | GGYRCC | 1 cut(s) | 1240 |
| BanII | GRGCYC | 3 cut(s) | 285, 1466, 1659 |
| Bbv12I | GWGCWC | 3 cut(s) | 1254, 1466, 1659 |
| BbvI | GCAGC | 3 cut(s) | 170, 989, 1626 |
| BccI | CCATC | 5 cut(s) | 47, 553, 640, 1658, 1742 |
| BceAI | ACGGC | 1 cut(s) | 341 |
| BciT130I | CCWGG | 3 cut(s) | 517, 794, 834 |
| BciVI | GTATCC | 2 cut(s) | 518, 791 |
| BclI | TGATCA | 1 cut(s) | 1513 |
| BcnI | CCSGG | 3 cut(s) | 251, 285, 1451 |
| BcoDI | GTCTC | 4 cut(s) | 104, 1058, 1157, 1183 |
| BfaI | CTAG | 1 cut(s) | 456 |
| BfmI | CTRYAG | 2 cut(s) | 558, 589 |
| BfoI | RGCGCY | 1 cut(s) | 1244 |
| BfuAI | ACCTGC | 1 cut(s) | 1588 |
| BfuI | GTATCC | 2 cut(s) | 518, 791 |
| BglII | AGATCT | 1 cut(s) | 685 |
| BisI | GCNGC | 3 cut(s) | 159, 1003, 1640 |
| BlsI | GCNGC | 3 cut(s) | 160, 1004, 1641 |
| Bme1390I | CCNGG | 6 cut(s) | 251, 285, 517, 794, 834, 1451 |
| Bme18I | GGWCC | 4 cut(s) | 235, 392, 940, 1549 |
| BmgT120I | GGNCC | 4 cut(s) | 235, 392, 940, 1549 |
| BmiI | GGNNCC | 3 cut(s) | 355, 1242, 1561 |
| BmrFI | CCNGG | 6 cut(s) | 251, 285, 517, 794, 834, 1451 |
| BmrI | ACTGGG | 1 cut(s) | 481 |
| BmsI | GCATC | 5 cut(s) | 130, 819, 1108, 1386, 1596 |
| BmuI | ACTGGG | 1 cut(s) | 481 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1088, 1120 |
| BpmI | CTGGAG | 1 cut(s) | 372 |
| Bpu14I | TTCGAA | 1 cut(s) | 580 |
| BpuEI | CTTGAG | 2 cut(s) | 1097, 1205 |
| BpuMI | CCSGG | 3 cut(s) | 251, 285, 1451 |
| BsaAI | YACGTR | 1 cut(s) | 328 |
| BsaBI | GATNNNNATC | 1 cut(s) | 321 |
| BsaHI | GRCGYC | 1 cut(s) | 1241 |
| BsaJI | CCNNGG | 3 cut(s) | 516, 793, 918 |
| BsaWI | WCCGGW | 4 cut(s) | 823, 1344, 1569, 1651 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 101, 131, 1641, 1671 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 962, 1569, 1719 |
| Bse118I | RCCGGY | 1 cut(s) | 1344 |
| Bse1I | ACTGG | 3 cut(s) | 355, 476, 1131 |
| Bse3DI | GCAATG | 1 cut(s) | 601 |
| Bse8I | GATNNNNATC | 1 cut(s) | 321 |
| BseAI | TCCGGA | 2 cut(s) | 823, 1569 |
| BseBI | CCWGG | 3 cut(s) | 517, 794, 834 |
| BseDI | CCNNGG | 3 cut(s) | 516, 793, 918 |
| BseGI | GGATG | 1 cut(s) | 319 |
| BseJI | GATNNNNATC | 1 cut(s) | 321 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 962, 1569, 1719 |
| BseMI | GCAATG | 1 cut(s) | 601 |
| BseMII | CTCAG | 6 cut(s) | 190, 375, 826, 1053, 1457, 1616 |
| BseNI | ACTGG | 3 cut(s) | 355, 476, 1131 |
| BseXI | GCAGC | 3 cut(s) | 170, 989, 1626 |
| BsgI | GTGCAG | 1 cut(s) | 177 |
| Bsh1236I | CGCG | 1 cut(s) | 264 |
| BshFI | GGCC | 2 cut(s) | 249, 621 |
| BshNI | GGYRCC | 1 cut(s) | 1240 |
| BshTI | ACCGGT | 1 cut(s) | 1344 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1254, 1466, 1659 |
| BsiSI | CCGG | 7 cut(s) | 250, 285, 824, 1345, 1450, 1570, 1652 |
| BslFI | GGGAC | 2 cut(s) | 172, 1352 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 962, 1569, 1719 |
| BsmAI | GTCTC | 4 cut(s) | 104, 1058, 1157, 1183 |
| BsmFI | GGGAC | 2 cut(s) | 172, 1352 |
| BsmI | GAATGC | 1 cut(s) | 588 |
| BsnI | GGCC | 2 cut(s) | 249, 621 |
| Bsp119I | TTCGAA | 1 cut(s) | 580 |
| Bsp1286I | GDGCHC | 4 cut(s) | 285, 1254, 1466, 1659 |
| Bsp13I | TCCGGA | 2 cut(s) | 823, 1569 |
| Bsp1407I | TGTACA | 1 cut(s) | 124 |
| Bsp143I | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| Bsp68I | TCGCGA | 1 cut(s) | 264 |
| BspACI | CCGC | 3 cut(s) | 161, 963, 1281 |
| BspANI | GGCC | 2 cut(s) | 249, 621 |
| BspCNI | CTCAG | 6 cut(s) | 189, 376, 825, 1054, 1456, 1615 |
| BspEI | TCCGGA | 2 cut(s) | 823, 1569 |
| BspFNI | CGCG | 1 cut(s) | 264 |
| BspHI | TCATGA | 1 cut(s) | 1744 |
| BspLI | GGNNCC | 3 cut(s) | 355, 1242, 1561 |
| BspMAI | CTGCAG | 1 cut(s) | 562 |
| BspMI | ACCTGC | 1 cut(s) | 1588 |
| BspPI | GGATC | 3 cut(s) | 657, 736, 1561 |
| BspQI | GCTCTTC | 1 cut(s) | 273 |
| BspT104I | TTCGAA | 1 cut(s) | 580 |
| BspT107I | GGYRCC | 1 cut(s) | 1240 |
| BsrDI | GCAATG | 1 cut(s) | 601 |
| BsrFI | RCCGGY | 1 cut(s) | 1344 |
| BsrGI | TGTACA | 1 cut(s) | 124 |
| BsrI | ACTGG | 3 cut(s) | 355, 476, 1131 |
| BssAI | RCCGGY | 1 cut(s) | 1344 |
| BssECI | CCNNGG | 3 cut(s) | 516, 793, 918 |
| BssMI | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| BssNI | GRCGYC | 1 cut(s) | 1241 |
| BssT1I | CCWWGG | 1 cut(s) | 918 |
| Bst2UI | CCWGG | 3 cut(s) | 517, 794, 834 |
| Bst4CI | ACNGT | 4 cut(s) | 784, 1056, 1493, 1773 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 495 |
| BstACI | GRCGYC | 1 cut(s) | 1241 |
| BstAUI | TGTACA | 1 cut(s) | 124 |
| BstBAI | YACGTR | 1 cut(s) | 328 |
| BstBI | TTCGAA | 1 cut(s) | 580 |
| BstC8I | GCNNGC | 2 cut(s) | 212, 1585 |
| BstF5I | GGATG | 1 cut(s) | 319 |
| BstFNI | CGCG | 1 cut(s) | 264 |
| BstH2I | RGCGCY | 1 cut(s) | 1244 |
| BstHHI | GCGC | 2 cut(s) | 1243, 1729 |
| BstKTI | GATC | 5 cut(s) | 652, 688, 731, 1516, 1569 |
| BstMAI | GTCTC | 4 cut(s) | 104, 1058, 1157, 1183 |
| BstMBI | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 583, 1249 |
| BstNI | CCWGG | 3 cut(s) | 517, 794, 834 |
| BstNSI | RCATGY | 4 cut(s) | 96, 214, 230, 382 |
| BstSCI | CCNGG | 6 cut(s) | 249, 283, 515, 792, 832, 1449 |
| BstSFI | CTRYAG | 2 cut(s) | 558, 589 |
| BstUI | CGCG | 1 cut(s) | 264 |
| BstV1I | GCAGC | 3 cut(s) | 170, 989, 1626 |
| BstX2I | RGATCY | 3 cut(s) | 649, 685, 728 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 245, 629, 670 |
| BstYI | RGATCY | 3 cut(s) | 649, 685, 728 |
| BsuI | GTATCC | 2 cut(s) | 518, 791 |
| BsuRI | GGCC | 2 cut(s) | 249, 621 |
| BtsCI | GGATG | 1 cut(s) | 319 |
| BtsI | GCAGTG | 1 cut(s) | 864 |
| BtsIMutI | CAGTG | 3 cut(s) | 184, 313, 864 |
| BtuMI | TCGCGA | 1 cut(s) | 264 |
| BveI | ACCTGC | 1 cut(s) | 1588 |
| Cac8I | GCNNGC | 2 cut(s) | 212, 1585 |
| CciI | TCATGA | 1 cut(s) | 1744 |
| CfoI | GCGC | 2 cut(s) | 1243, 1729 |
| Cfr10I | RCCGGY | 1 cut(s) | 1344 |
| Cfr13I | GGNCC | 4 cut(s) | 235, 392, 940, 1549 |
| CseI | GACGC | 1 cut(s) | 1698 |
| Csp6I | GTAC | 2 cut(s) | 125, 329 |
| CspAI | ACCGGT | 1 cut(s) | 1344 |
| CviAII | CATG | 6 cut(s) | 93, 211, 227, 379, 1564, 1745 |
| CviQI | GTAC | 2 cut(s) | 125, 329 |
| DinI | GGCGCC | 1 cut(s) | 1242 |
| DpnI | GATC | 5 cut(s) | 651, 687, 730, 1515, 1568 |
| DpnII | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| DraI | TTTAAA | 2 cut(s) | 1309, 1425 |
| EaeI | YGGCCR | 1 cut(s) | 247 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 495 |
| EarI | CTCTTC | 2 cut(s) | 273, 495 |
| Ecl136II | GAGCTC | 2 cut(s) | 1464, 1657 |
| Eco130I | CCWWGG | 1 cut(s) | 918 |
| Eco24I | GRGCYC | 3 cut(s) | 285, 1466, 1659 |
| Eco47I | GGWCC | 4 cut(s) | 235, 392, 940, 1549 |
| Eco53kI | GAGCTC | 2 cut(s) | 1464, 1657 |
| Eco57I | CTGAAG | 5 cut(s) | 696, 929, 1310, 1379, 1382 |
| EcoICRI | GAGCTC | 2 cut(s) | 1464, 1657 |
| EcoO109I | RGGNCCY | 1 cut(s) | 940 |
| EcoRII | CCWGG | 3 cut(s) | 515, 792, 832 |
| EcoT14I | CCWWGG | 1 cut(s) | 918 |
| EcoT22I | ATGCAT | 2 cut(s) | 228, 368 |
| EcoT38I | GRGCYC | 3 cut(s) | 285, 1466, 1659 |
| EgeI | GGCGCC | 1 cut(s) | 1242 |
| EheI | GGCGCC | 1 cut(s) | 1242 |
| ErhI | CCWWGG | 1 cut(s) | 918 |
| FaeI | CATG | 6 cut(s) | 96, 214, 230, 382, 1567, 1748 |
| FaqI | GGGAC | 2 cut(s) | 172, 1352 |
| FatI | CATG | 6 cut(s) | 92, 210, 226, 378, 1563, 1744 |
| FauI | CCCGC | 1 cut(s) | 154 |
| FbaI | TGATCA | 1 cut(s) | 1513 |
| Fnu4HI | GCNGC | 3 cut(s) | 159, 1003, 1640 |
| FokI | GGATG | 1 cut(s) | 326 |
| FriOI | GRGCYC | 3 cut(s) | 285, 1466, 1659 |
| Fsp4HI | GCNGC | 3 cut(s) | 159, 1003, 1640 |
| FspBI | CTAG | 1 cut(s) | 456 |
| GlaI | GCGC | 2 cut(s) | 1242, 1728 |
| GluI | GCNGC | 3 cut(s) | 159, 1003, 1640 |
| GsuI | CTGGAG | 1 cut(s) | 372 |
| HaeII | RGCGCY | 1 cut(s) | 1244 |
| HaeIII | GGCC | 2 cut(s) | 249, 621 |
| HapII | CCGG | 7 cut(s) | 250, 285, 824, 1345, 1450, 1570, 1652 |
| HgaI | GACGC | 1 cut(s) | 1698 |
| HhaI | GCGC | 2 cut(s) | 1243, 1729 |
| Hin1I | GRCGYC | 1 cut(s) | 1241 |
| Hin1II | CATG | 6 cut(s) | 96, 214, 230, 382, 1567, 1748 |
| Hin6I | GCGC | 2 cut(s) | 1241, 1727 |
| HinP1I | GCGC | 2 cut(s) | 1241, 1727 |
| HincII | GTYRAC | 1 cut(s) | 1059 |
| HindII | GTYRAC | 1 cut(s) | 1059 |
| HindIII | AAGCTT | 3 cut(s) | 626, 776, 1427 |
| HinfI | GANTC | 6 cut(s) | 400, 949, 1150, 1402, 1672, 1715 |
| HpaII | CCGG | 7 cut(s) | 250, 285, 824, 1345, 1450, 1570, 1652 |
| HphI | GGTGA | 2 cut(s) | 655, 1508 |
| Hpy166II | GTNNAC | 1 cut(s) | 1059 |
| Hpy8I | GTNNAC | 1 cut(s) | 1059 |
| Hpy99I | CGWCG | 2 cut(s) | 1764, 1773 |
| HpyAV | CCTTC | 6 cut(s) | 64, 611, 894, 953, 1448, 1625 |
| HpyCH4III | ACNGT | 4 cut(s) | 784, 1056, 1493, 1773 |
| HpyCH4IV | ACGT | 4 cut(s) | 327, 483, 1141, 1409 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 583, 1249 |
| HpySE526I | ACGT | 4 cut(s) | 327, 483, 1141, 1409 |
| Hsp92I | GRCGYC | 1 cut(s) | 1241 |
| Hsp92II | CATG | 6 cut(s) | 96, 214, 230, 382, 1567, 1748 |
| HspAI | GCGC | 2 cut(s) | 1241, 1727 |
| KasI | GGCGCC | 1 cut(s) | 1240 |
| Kpn2I | TCCGGA | 2 cut(s) | 823, 1569 |
| Ksp22I | TGATCA | 1 cut(s) | 1513 |
| Kzo9I | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| LguI | GCTCTTC | 1 cut(s) | 273 |
| LmnI | GCTCC | 6 cut(s) | 353, 1027, 1249, 1572, 1654, 1662 |
| Lsp1109I | GCAGC | 3 cut(s) | 170, 989, 1626 |
| LweI | GCATC | 5 cut(s) | 130, 819, 1108, 1386, 1596 |
| MaeI | CTAG | 1 cut(s) | 456 |
| MaeII | ACGT | 4 cut(s) | 327, 483, 1141, 1409 |
| MaeIII | GTNAC | 6 cut(s) | 47, 656, 968, 1050, 1487, 1536 |
| MalI | GATC | 5 cut(s) | 651, 687, 730, 1515, 1568 |
| MboI | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| MboII | GAAGA | 7 cut(s) | 278, 290, 482, 812, 944, 1484, 1590 |
| MflI | RGATCY | 3 cut(s) | 649, 685, 728 |
| MhlI | GDGCHC | 4 cut(s) | 285, 1254, 1466, 1659 |
| Mly113I | GGCGCC | 1 cut(s) | 1241 |
| MlyI | GAGTC | 2 cut(s) | 1159, 1396 |
| MmeI | TCCRAC | 1 cut(s) | 1527 |
| MnlI | CCTC | 7 cut(s) | 200, 868, 1096, 1208, 1309, 1452, 1543 |
| Mph1103I | ATGCAT | 2 cut(s) | 228, 368 |
| MroI | TCCGGA | 2 cut(s) | 823, 1569 |
| MroXI | GAANNNNTTC | 1 cut(s) | 258 |
| MslI | CAYNNNNRTG | 2 cut(s) | 419, 1738 |
| MspA1I | CMGCKG | 1 cut(s) | 161 |
| MspI | CCGG | 7 cut(s) | 250, 285, 824, 1345, 1450, 1570, 1652 |
| MspR9I | CCNGG | 6 cut(s) | 251, 285, 517, 794, 834, 1451 |
| Mva1269I | GAATGC | 1 cut(s) | 588 |
| MvaI | CCWGG | 3 cut(s) | 517, 794, 834 |
| MvnI | CGCG | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 583, 1249 |
| NarI | GGCGCC | 1 cut(s) | 1241 |
| NciI | CCSGG | 3 cut(s) | 251, 285, 1451 |
| NdeII | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| NlaIII | CATG | 6 cut(s) | 96, 214, 230, 382, 1567, 1748 |
| NlaIV | GGNNCC | 3 cut(s) | 355, 1242, 1561 |
| NruI | TCGCGA | 1 cut(s) | 264 |
| NsiI | ATGCAT | 2 cut(s) | 228, 368 |
| NspI | RCATGY | 4 cut(s) | 96, 214, 230, 382 |
| NspV | TTCGAA | 1 cut(s) | 580 |
| PaeI | GCATGC | 1 cut(s) | 214 |
| PagI | TCATGA | 1 cut(s) | 1744 |
| PciI | ACATGT | 1 cut(s) | 378 |
| PciSI | GCTCTTC | 1 cut(s) | 273 |
| PctI | GAATGC | 1 cut(s) | 588 |
| PdmI | GAANNNNTTC | 1 cut(s) | 258 |
| PfeI | GAWTC | 4 cut(s) | 400, 949, 1672, 1715 |
| PfoI | TCCNGGA | 1 cut(s) | 1449 |
| PinAI | ACCGGT | 1 cut(s) | 1344 |
| PkrI | GCNGC | 3 cut(s) | 160, 1004, 1641 |
| PleI | GAGTC | 2 cut(s) | 1158, 1396 |
| PluTI | GGCGCC | 1 cut(s) | 1244 |
| PpsI | GAGTC | 2 cut(s) | 1158, 1396 |
| Ppu21I | YACGTR | 1 cut(s) | 328 |
| PpuMI | RGGWCCY | 1 cut(s) | 940 |
| PscI | ACATGT | 1 cut(s) | 378 |
| Psp124BI | GAGCTC | 2 cut(s) | 1466, 1659 |
| Psp1406I | AACGTT | 1 cut(s) | 483 |
| Psp5II | RGGWCCY | 1 cut(s) | 940 |
| Psp6I | CCWGG | 3 cut(s) | 515, 792, 832 |
| PspGI | CCWGG | 3 cut(s) | 515, 792, 832 |
| PspN4I | GGNNCC | 3 cut(s) | 355, 1242, 1561 |
| PspPI | GGNCC | 4 cut(s) | 235, 392, 940, 1549 |
| PspPPI | RGGWCCY | 1 cut(s) | 940 |
| PstI | CTGCAG | 1 cut(s) | 562 |
| PsuI | RGATCY | 3 cut(s) | 649, 685, 728 |
| RruI | TCGCGA | 1 cut(s) | 264 |
| RsaI | GTAC | 2 cut(s) | 126, 330 |
| RsaNI | GTAC | 2 cut(s) | 125, 329 |
| RseI | CAYNNNNRTG | 2 cut(s) | 419, 1738 |
| SacI | GAGCTC | 2 cut(s) | 1466, 1659 |
| SapI | GCTCTTC | 1 cut(s) | 273 |
| SatI | GCNGC | 3 cut(s) | 159, 1003, 1640 |
| Sau3AI | GATC | 5 cut(s) | 649, 685, 728, 1513, 1566 |
| Sau96I | GGNCC | 4 cut(s) | 235, 392, 940, 1549 |
| SchI | GAGTC | 2 cut(s) | 1159, 1396 |
| ScrFI | CCNGG | 6 cut(s) | 251, 285, 517, 794, 834, 1451 |
| SduI | GDGCHC | 4 cut(s) | 285, 1254, 1466, 1659 |
| SfaNI | GCATC | 5 cut(s) | 130, 819, 1108, 1386, 1596 |
| SfcI | CTRYAG | 2 cut(s) | 558, 589 |
| SfoI | GGCGCC | 1 cut(s) | 1242 |
| SfuI | TTCGAA | 1 cut(s) | 580 |
| SinI | GGWCC | 4 cut(s) | 235, 392, 940, 1549 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 419, 1738 |
| SmlI | CTYRAG | 2 cut(s) | 1112, 1184 |
| SmoI | CTYRAG | 2 cut(s) | 1112, 1184 |
| SphI | GCATGC | 1 cut(s) | 214 |
| SsiI | CCGC | 3 cut(s) | 161, 963, 1281 |
| SspDI | GGCGCC | 1 cut(s) | 1240 |
| SspI | AATATT | 1 cut(s) | 1236 |
| SspMI | CTAG | 1 cut(s) | 456 |
| SstI | GAGCTC | 2 cut(s) | 1466, 1659 |
| StyD4I | CCNGG | 6 cut(s) | 249, 283, 515, 792, 832, 1449 |
| StyI | CCWWGG | 1 cut(s) | 918 |
| TaaI | ACNGT | 4 cut(s) | 784, 1056, 1493, 1773 |
| TaiI | ACGT | 4 cut(s) | 330, 486, 1144, 1412 |
| TaqI | TCGA | 3 cut(s) | 580, 708, 1095 |
| TatI | WGTACW | 1 cut(s) | 124 |
| TfiI | GAWTC | 4 cut(s) | 400, 949, 1672, 1715 |
| TscAI | CASTG | 3 cut(s) | 184, 313, 871 |
| TseI | GCWGC | 3 cut(s) | 158, 1002, 1639 |
| TspDTI | ATGAA | 5 cut(s) | 17, 32, 89, 630, 876 |
| TspRI | CASTG | 3 cut(s) | 184, 313, 871 |
| VpaK11BI | GGWCC | 4 cut(s) | 235, 392, 940, 1549 |
| XapI | RAATTY | 5 cut(s) | 8, 551, 747, 1177, 1214 |
| XceI | RCATGY | 4 cut(s) | 96, 214, 230, 382 |
| XmnI | GAANNNNTTC | 1 cut(s) | 258 |
| XspI | CTAG | 1 cut(s) | 456 |
| Zsp2I | ATGCAT | 2 cut(s) | 228, 368 |