TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 16 - 182 | 7.5e-54 | TIR domain |
| TIR_2 | PF13676 | 18 - 126 | 4.8e-13 | TIR domain |
| NB-ARC | PF00931 | 191 - 356 | 8.1e-19 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 426 - 494 | 1e-20 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 728 - 885 | 3.5e-16 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 534, 2323, 2502 |
| AccIII | TCCGGA | 2 cut(s) | 1225, 2161 |
| AciI | CCGC | 3 cut(s) | 532, 1373, 2323 |
| AclWI | GGATC | 6 cut(s) | 326, 841, 1487, 1589, 1602, 2172 |
| AcoI | YGGCCR | 1 cut(s) | 2324 |
| AcsI | RAATTY | 7 cut(s) | 704, 914, 1220, 1786, 2196, 2341, 2471 |
| AcuI | CTGAAG | 3 cut(s) | 1608, 1895, 2395 |
| AfaI | GTAC | 8 cut(s) | 345, 787, 792, 865, 1542, 1990, 2491, 2549 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 406, 830, 868, 1726, 1768, 2336, 2337, 2610 |
| AflII | CTTAAG | 1 cut(s) | 1658 |
| AflIII | ACRYGT | 1 cut(s) | 340 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1696 |
| AjnI | CCWGG | 4 cut(s) | 949, 1081, 1926, 2149 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2829, 2861 |
| Alw21I | GWGCWC | 3 cut(s) | 279, 1053, 1926 |
| Alw44I | GTGCAC | 1 cut(s) | 275 |
| AlwI | GGATC | 6 cut(s) | 326, 841, 1487, 1589, 1602, 2172 |
| Ama87I | CYCGRG | 2 cut(s) | 36, 1964 |
| Aor13HI | TCCGGA | 2 cut(s) | 1225, 2161 |
| AoxI | GGCC | 4 cut(s) | 1870, 2324, 2464, 2526 |
| ApaLI | GTGCAC | 1 cut(s) | 275 |
| ApeKI | GCWGC | 5 cut(s) | 5, 8, 440, 717, 2058 |
| ApoI | RAATTY | 7 cut(s) | 704, 914, 1220, 1786, 2196, 2341, 2471 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 89, 2475 |
| AspS9I | GGNCC | 1 cut(s) | 2465 |
| AsuC2I | CCSGG | 4 cut(s) | 82, 401, 1497, 2187 |
| AvaI | CYCGRG | 2 cut(s) | 36, 1964 |
| AxyI | CCTNAGG | 1 cut(s) | 1725 |
| BaeGI | GKGCMC | 1 cut(s) | 279 |
| BamHI | GGATCC | 1 cut(s) | 1594 |
| BanII | GRGCYC | 3 cut(s) | 1053, 1160, 1958 |
| BbsI | GAAGAC | 2 cut(s) | 1733, 2139 |
| Bbv12I | GWGCWC | 3 cut(s) | 279, 1053, 1926 |
| BbvI | GCAGC | 3 cut(s) | 452, 704, 2045 |
| BceAI | ACGGC | 2 cut(s) | 340, 453 |
| BciT130I | CCWGG | 4 cut(s) | 951, 1083, 1928, 2151 |
| BcnI | CCSGG | 4 cut(s) | 82, 401, 1497, 2187 |
| BfaI | CTAG | 3 cut(s) | 924, 1125, 1433 |
| BfrI | CTTAAG | 1 cut(s) | 1658 |
| BglII | AGATCT | 2 cut(s) | 1606, 2650 |
| BisI | GCNGC | 6 cut(s) | 6, 9, 441, 718, 2059, 2324 |
| BlsI | GCNGC | 6 cut(s) | 7, 10, 442, 719, 2060, 2325 |
| Bme1390I | CCNGG | 8 cut(s) | 82, 401, 951, 1083, 1497, 1928, 2151, 2187 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1696 |
| BmeT110I | CYCGRG | 2 cut(s) | 36, 1964 |
| BmgT120I | GGNCC | 1 cut(s) | 2465 |
| BmiI | GGNNCC | 3 cut(s) | 1159, 1596, 2697 |
| BmrFI | CCNGG | 8 cut(s) | 82, 401, 951, 1083, 1497, 1928, 2151, 2187 |
| BmrI | ACTGGG | 1 cut(s) | 1777 |
| BmuI | ACTGGG | 1 cut(s) | 1777 |
| BoxI | GACNNNNGTC | 2 cut(s) | 503, 1472 |
| BpiI | GAAGAC | 2 cut(s) | 1733, 2139 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 380, 412, 918, 950 |
| BpmI | CTGGAG | 1 cut(s) | 179 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1524, 1579 |
| BpuEI | CTTGAG | 5 cut(s) | 1067, 1548, 1718, 1731, 1871 |
| BpuMI | CCSGG | 4 cut(s) | 82, 401, 1497, 2187 |
| Bsa29I | ATCGAT | 2 cut(s) | 1905, 2769 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2240 |
| BsaI | GGTCTC | 2 cut(s) | 1736, 2048 |
| BsaJI | CCNNGG | 6 cut(s) | 35, 399, 1081, 1590, 2150, 2523 |
| BsaWI | WCCGGW | 2 cut(s) | 1225, 2161 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2673, 2703 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 406, 830, 868, 1726, 1768, 2336, 2337, 2610 |
| Bse1I | ACTGG | 3 cut(s) | 162, 1772, 2044 |
| Bse21I | CCTNAGG | 1 cut(s) | 1725 |
| Bse3DI | GCAATG | 3 cut(s) | 669, 1171, 2137 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2240 |
| BseAI | TCCGGA | 2 cut(s) | 1225, 2161 |
| BseBI | CCWGG | 4 cut(s) | 951, 1083, 1928, 2151 |
| BseCI | ATCGAT | 2 cut(s) | 1905, 2769 |
| BseDI | CCNNGG | 6 cut(s) | 35, 399, 1081, 1590, 2150, 2523 |
| BseGI | GGATG | 6 cut(s) | 625, 1777, 2214, 2234, 2519, 2877 |
| BseJI | GATNNNNATC | 1 cut(s) | 2240 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 406, 830, 868, 1726, 1768, 2336, 2337, 2610 |
| BseMI | GCAATG | 3 cut(s) | 669, 1171, 2137 |
| BseMII | CTCAG | 2 cut(s) | 229, 1739 |
| BseNI | ACTGG | 3 cut(s) | 162, 1772, 2044 |
| BseRI | GAGGAG | 2 cut(s) | 2244, 2590 |
| BseSI | GKGCMC | 1 cut(s) | 279 |
| BseXI | GCAGC | 3 cut(s) | 452, 704, 2045 |
| BseYI | CCCAGC | 1 cut(s) | 1191 |
| BsgI | GTGCAG | 1 cut(s) | 1748 |
| Bsh1236I | CGCG | 3 cut(s) | 534, 2323, 2502 |
| BshFI | GGCC | 4 cut(s) | 1872, 2326, 2466, 2528 |
| BshVI | ATCGAT | 2 cut(s) | 1905, 2769 |
| BsiHKAI | GWGCWC | 3 cut(s) | 279, 1053, 1926 |
| BsiHKCI | CYCGRG | 2 cut(s) | 36, 1964 |
| BsiSI | CCGG | 6 cut(s) | 82, 401, 1226, 1497, 2162, 2186 |
| BslFI | GGGAC | 2 cut(s) | 491, 1703 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 406, 830, 868, 1726, 1768, 2336, 2337, 2610 |
| BsmBI | CGTCTC | 2 cut(s) | 698, 743 |
| BsmFI | GGGAC | 2 cut(s) | 491, 1703 |
| BsmI | GAATGC | 2 cut(s) | 1580, 2306 |
| BsnI | GGCC | 4 cut(s) | 1872, 2326, 2466, 2528 |
| Bso31I | GGTCTC | 2 cut(s) | 1736, 2048 |
| BsoBI | CYCGRG | 2 cut(s) | 36, 1964 |
| Bsp1286I | GDGCHC | 5 cut(s) | 279, 1053, 1160, 1926, 1958 |
| Bsp13I | TCCGGA | 2 cut(s) | 1225, 2161 |
| Bsp1407I | TGTACA | 1 cut(s) | 1988 |
| Bsp19I | CCATGG | 1 cut(s) | 1590 |
| Bsp68I | TCGCGA | 1 cut(s) | 2502 |
| BspACI | CCGC | 3 cut(s) | 532, 1373, 2323 |
| BspANI | GGCC | 4 cut(s) | 1872, 2326, 2466, 2528 |
| BspCNI | CTCAG | 2 cut(s) | 228, 1738 |
| BspDI | ATCGAT | 2 cut(s) | 1905, 2769 |
| BspEI | TCCGGA | 2 cut(s) | 1225, 2161 |
| BspFNI | CGCG | 3 cut(s) | 534, 2323, 2502 |
| BspLI | GGNNCC | 3 cut(s) | 1159, 1596, 2697 |
| BspPI | GGATC | 6 cut(s) | 326, 841, 1487, 1589, 1602, 2172 |
| BspTI | CTTAAG | 1 cut(s) | 1658 |
| BspTNI | GGTCTC | 2 cut(s) | 1736, 2048 |
| BsrDI | GCAATG | 3 cut(s) | 669, 1171, 2137 |
| BsrGI | TGTACA | 1 cut(s) | 1988 |
| BsrI | ACTGG | 3 cut(s) | 162, 1772, 2044 |
| BssECI | CCNNGG | 6 cut(s) | 35, 399, 1081, 1590, 2150, 2523 |
| BssT1I | CCWWGG | 1 cut(s) | 1590 |
| Bst2UI | CCWGG | 4 cut(s) | 951, 1083, 1928, 2151 |
| Bst4CI | ACNGT | 6 cut(s) | 303, 502, 692, 790, 863, 1668 |
| BstAFI | CTTAAG | 1 cut(s) | 1658 |
| BstAUI | TGTACA | 1 cut(s) | 1988 |
| BstC8I | GCNNGC | 2 cut(s) | 715, 2091 |
| BstDEI | CTNAG | 7 cut(s) | 59, 215, 1524, 1579, 1649, 1725, 1910 |
| BstDSI | CCRYGG | 1 cut(s) | 1590 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| BstF5I | GGATG | 6 cut(s) | 625, 1777, 2214, 2234, 2519, 2877 |
| BstFNI | CGCG | 3 cut(s) | 534, 2323, 2502 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 251, 1188, 1834, 2525 |
| BstNI | CCWGG | 4 cut(s) | 951, 1083, 1928, 2151 |
| BstNSI | RCATGY | 4 cut(s) | 344, 813, 1247, 1311 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 503, 1472 |
| BstSCI | CCNGG | 8 cut(s) | 80, 399, 949, 1081, 1495, 1926, 2149, 2185 |
| BstSLI | GKGCMC | 1 cut(s) | 279 |
| BstUI | CGCG | 3 cut(s) | 534, 2323, 2502 |
| BstV1I | GCAGC | 3 cut(s) | 452, 704, 2045 |
| BstV2I | GAAGAC | 2 cut(s) | 1733, 2139 |
| BstX2I | RGATCY | 6 cut(s) | 331, 1492, 1594, 1606, 2164, 2650 |
| BstYI | RGATCY | 6 cut(s) | 331, 1492, 1594, 1606, 2164, 2650 |
| Bsu15I | ATCGAT | 2 cut(s) | 1905, 2769 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1725 |
| BsuRI | GGCC | 4 cut(s) | 1872, 2326, 2466, 2528 |
| BsuTUI | ATCGAT | 2 cut(s) | 1905, 2769 |
| BtgI | CCRYGG | 1 cut(s) | 1590 |
| BtsCI | GGATG | 6 cut(s) | 625, 1777, 2214, 2234, 2519, 2877 |
| BtsIMutI | CAGTG | 1 cut(s) | 1765 |
| BtuMI | TCGCGA | 1 cut(s) | 2502 |
| Cac8I | GCNNGC | 2 cut(s) | 715, 2091 |
| Cfr13I | GGNCC | 1 cut(s) | 2465 |
| ClaI | ATCGAT | 2 cut(s) | 1905, 2769 |
| Csp6I | GTAC | 8 cut(s) | 344, 786, 791, 864, 1541, 1989, 2490, 2548 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1092, 1127 |
| CviQI | GTAC | 8 cut(s) | 344, 786, 791, 864, 1541, 1989, 2490, 2548 |
| DdeI | CTNAG | 7 cut(s) | 59, 215, 1524, 1579, 1649, 1725, 1910 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1696 |
| EaeI | YGGCCR | 1 cut(s) | 2324 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1696 |
| Ecl136II | GAGCTC | 1 cut(s) | 1051 |
| Eco130I | CCWWGG | 1 cut(s) | 1590 |
| Eco147I | AGGCCT | 2 cut(s) | 1872, 2528 |
| Eco24I | GRGCYC | 3 cut(s) | 1053, 1160, 1958 |
| Eco31I | GGTCTC | 2 cut(s) | 1736, 2048 |
| Eco32I | GATATC | 3 cut(s) | 28, 1303, 1531 |
| Eco53kI | GAGCTC | 1 cut(s) | 1051 |
| Eco57I | CTGAAG | 3 cut(s) | 1608, 1895, 2395 |
| Eco81I | CCTNAGG | 1 cut(s) | 1725 |
| Eco88I | CYCGRG | 2 cut(s) | 36, 1964 |
| EcoICRI | GAGCTC | 1 cut(s) | 1051 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| EcoRI | GAATTC | 3 cut(s) | 704, 1786, 2341 |
| EcoRII | CCWGG | 4 cut(s) | 949, 1081, 1926, 2149 |
| EcoRV | GATATC | 3 cut(s) | 28, 1303, 1531 |
| EcoT14I | CCWWGG | 1 cut(s) | 1590 |
| EcoT22I | ATGCAT | 5 cut(s) | 376, 815, 1443, 1644, 2297 |
| EcoT38I | GRGCYC | 3 cut(s) | 1053, 1160, 1958 |
| ErhI | CCWWGG | 1 cut(s) | 1590 |
| Esp3I | CGTCTC | 2 cut(s) | 698, 743 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1704, 1736 |
| FaqI | GGGAC | 2 cut(s) | 491, 1703 |
| FauNDI | CATATG | 2 cut(s) | 1833, 2445 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 9, 441, 718, 2059, 2324 |
| FokI | GGATG | 5 cut(s) | 632, 1784, 2221, 2241, 2506 |
| FriOI | GRGCYC | 3 cut(s) | 1053, 1160, 1958 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 9, 441, 718, 2059, 2324 |
| FspBI | CTAG | 3 cut(s) | 924, 1125, 1433 |
| GluI | GCNGC | 6 cut(s) | 6, 9, 441, 718, 2059, 2324 |
| GsaI | CCCAGC | 1 cut(s) | 1195 |
| GsuI | CTGGAG | 1 cut(s) | 179 |
| HaeIII | GGCC | 4 cut(s) | 1872, 2326, 2466, 2528 |
| HapII | CCGG | 6 cut(s) | 82, 401, 1226, 1497, 2162, 2186 |
| HincII | GTYRAC | 1 cut(s) | 1708 |
| HindII | GTYRAC | 1 cut(s) | 1708 |
| HindIII | AAGCTT | 3 cut(s) | 728, 2033, 2246 |
| HpaII | CCGG | 6 cut(s) | 82, 401, 1226, 1497, 2162, 2186 |
| Hpy166II | GTNNAC | 5 cut(s) | 76, 277, 1541, 1708, 1717 |
| Hpy8I | GTNNAC | 5 cut(s) | 76, 277, 1541, 1708, 1717 |
| Hpy99I | CGWCG | 1 cut(s) | 1481 |
| HpyAV | CCTTC | 9 cut(s) | 1181, 1190, 1279, 1632, 1730, 2019, 2419, 2602, 2768 |
| HpyCH4III | ACNGT | 6 cut(s) | 303, 502, 692, 790, 863, 1668 |
| HpyCH4IV | ACGT | 2 cut(s) | 1032, 2575 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 251, 1188, 1834, 2525 |
| HpyF3I | CTNAG | 7 cut(s) | 59, 215, 1524, 1579, 1649, 1725, 1910 |
| HpySE526I | ACGT | 2 cut(s) | 1032, 2575 |
| Kpn2I | TCCGGA | 2 cut(s) | 1225, 2161 |
| LmnI | GCTCC | 4 cut(s) | 401, 1163, 1179, 1890 |
| Lsp1109I | GCAGC | 3 cut(s) | 452, 704, 2045 |
| MaeI | CTAG | 3 cut(s) | 924, 1125, 1433 |
| MaeII | ACGT | 2 cut(s) | 1032, 2575 |
| MaeIII | GTNAC | 9 cut(s) | 967, 1310, 1662, 1676, 1913, 2282, 2384, 2414, 2554 |
| MfeI | CAATTG | 2 cut(s) | 1470, 1569 |
| MflI | RGATCY | 6 cut(s) | 331, 1492, 1594, 1606, 2164, 2650 |
| MhlI | GDGCHC | 5 cut(s) | 279, 1053, 1160, 1926, 1958 |
| MlyI | GAGTC | 6 cut(s) | 491, 858, 1685, 1910, 2591, 2637 |
| MmeI | TCCRAC | 3 cut(s) | 544, 2736, 2835 |
| Mph1103I | ATGCAT | 5 cut(s) | 376, 815, 1443, 1644, 2297 |
| MroI | TCCGGA | 2 cut(s) | 1225, 2161 |
| MroXI | GAANNNNTTC | 2 cut(s) | 89, 2475 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1400, 1589, 1770 |
| MspCI | CTTAAG | 1 cut(s) | 1658 |
| MspI | CCGG | 6 cut(s) | 82, 401, 1226, 1497, 2162, 2186 |
| MspR9I | CCNGG | 8 cut(s) | 82, 401, 951, 1083, 1497, 1928, 2151, 2187 |
| MunI | CAATTG | 2 cut(s) | 1470, 1569 |
| Mva1269I | GAATGC | 2 cut(s) | 1580, 2306 |
| MvaI | CCWGG | 4 cut(s) | 951, 1083, 1928, 2151 |
| MvnI | CGCG | 3 cut(s) | 534, 2323, 2502 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 251, 1188, 1834, 2525 |
| NciI | CCSGG | 4 cut(s) | 82, 401, 1497, 2187 |
| NcoI | CCATGG | 1 cut(s) | 1590 |
| NdeI | CATATG | 2 cut(s) | 1833, 2445 |
| NlaIV | GGNNCC | 3 cut(s) | 1159, 1596, 2697 |
| NmuCI | GTSAC | 2 cut(s) | 1913, 2384 |
| NruI | TCGCGA | 1 cut(s) | 2502 |
| NsiI | ATGCAT | 5 cut(s) | 376, 815, 1443, 1644, 2297 |
| NspI | RCATGY | 4 cut(s) | 344, 813, 1247, 1311 |
| PaeR7I | CTCGAG | 1 cut(s) | 1964 |
| PceI | AGGCCT | 2 cut(s) | 1872, 2528 |
| PciI | ACATGT | 1 cut(s) | 340 |
| PctI | GAATGC | 2 cut(s) | 1580, 2306 |
| PdmI | GAANNNNTTC | 2 cut(s) | 89, 2475 |
| PfeI | GAWTC | 9 cut(s) | 206, 461, 567, 580, 593, 960, 1376, 1481, 1758 |
| PfoI | TCCNGGA | 2 cut(s) | 1495, 2185 |
| PkrI | GCNGC | 6 cut(s) | 7, 10, 442, 719, 2060, 2325 |
| PleI | GAGTC | 6 cut(s) | 490, 857, 1685, 1910, 2591, 2636 |
| PpsI | GAGTC | 6 cut(s) | 490, 857, 1685, 1910, 2591, 2636 |
| PscI | ACATGT | 1 cut(s) | 340 |
| PshAI | GACNNNNGTC | 2 cut(s) | 503, 1472 |
| Psp124BI | GAGCTC | 1 cut(s) | 1053 |
| Psp6I | CCWGG | 4 cut(s) | 949, 1081, 1926, 2149 |
| PspFI | CCCAGC | 1 cut(s) | 1191 |
| PspGI | CCWGG | 4 cut(s) | 949, 1081, 1926, 2149 |
| PspN4I | GGNNCC | 3 cut(s) | 1159, 1596, 2697 |
| PspPI | GGNCC | 1 cut(s) | 2465 |
| PsuI | RGATCY | 6 cut(s) | 331, 1492, 1594, 1606, 2164, 2650 |
| RruI | TCGCGA | 1 cut(s) | 2502 |
| RsaI | GTAC | 8 cut(s) | 345, 787, 792, 865, 1542, 1990, 2491, 2549 |
| RsaNI | GTAC | 8 cut(s) | 344, 786, 791, 864, 1541, 1989, 2490, 2548 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1400, 1589, 1770 |
| SacI | GAGCTC | 1 cut(s) | 1053 |
| SatI | GCNGC | 6 cut(s) | 6, 9, 441, 718, 2059, 2324 |
| Sau96I | GGNCC | 1 cut(s) | 2465 |
| SchI | GAGTC | 6 cut(s) | 491, 858, 1685, 1910, 2591, 2637 |
| ScrFI | CCNGG | 8 cut(s) | 82, 401, 951, 1083, 1497, 1928, 2151, 2187 |
| SduI | GDGCHC | 5 cut(s) | 279, 1053, 1160, 1926, 1958 |
| Sfr274I | CTCGAG | 1 cut(s) | 1964 |
| SlaI | CTCGAG | 1 cut(s) | 1964 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1400, 1589, 1770 |
| SmlI | CTYRAG | 7 cut(s) | 1046, 1563, 1658, 1733, 1746, 1850, 1964 |
| SmoI | CTYRAG | 7 cut(s) | 1046, 1563, 1658, 1733, 1746, 1850, 1964 |
| SseBI | AGGCCT | 2 cut(s) | 1872, 2528 |
| SsiI | CCGC | 3 cut(s) | 532, 1373, 2323 |
| SspI | AATATT | 1 cut(s) | 1424 |
| SspMI | CTAG | 3 cut(s) | 924, 1125, 1433 |
| SstI | GAGCTC | 1 cut(s) | 1053 |
| StuI | AGGCCT | 2 cut(s) | 1872, 2528 |
| StyD4I | CCNGG | 8 cut(s) | 80, 399, 949, 1081, 1495, 1926, 2149, 2185 |
| StyI | CCWWGG | 1 cut(s) | 1590 |
| TaaI | ACNGT | 6 cut(s) | 303, 502, 692, 790, 863, 1668 |
| TaiI | ACGT | 2 cut(s) | 1035, 2578 |
| TatI | WGTACW | 4 cut(s) | 790, 1540, 1988, 2489 |
| TauI | GCSGC | 1 cut(s) | 2326 |
| TfiI | GAWTC | 9 cut(s) | 206, 461, 567, 580, 593, 960, 1376, 1481, 1758 |
| TscAI | CASTG | 1 cut(s) | 1772 |
| TseFI | GTSAC | 2 cut(s) | 1913, 2384 |
| TseI | GCWGC | 5 cut(s) | 5, 8, 440, 717, 2058 |
| Tsp45I | GTSAC | 2 cut(s) | 1913, 2384 |
| TspGWI | ACGGA | 1 cut(s) | 1150 |
| TspRI | CASTG | 1 cut(s) | 1772 |
| Vha464I | CTTAAG | 1 cut(s) | 1658 |
| VneI | GTGCAC | 1 cut(s) | 275 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1724 |
| XapI | RAATTY | 7 cut(s) | 704, 914, 1220, 1786, 2196, 2341, 2471 |
| XceI | RCATGY | 4 cut(s) | 344, 813, 1247, 1311 |
| XhoI | CTCGAG | 1 cut(s) | 1964 |
| XmnI | GAANNNNTTC | 2 cut(s) | 89, 2475 |
| XspI | CTAG | 3 cut(s) | 924, 1125, 1433 |
| Zsp2I | ATGCAT | 5 cut(s) | 376, 815, 1443, 1644, 2297 |