MD05G1147100.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
27769213 .. 27772691
3479 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1147100.v1.1.491

Sequence Viewer

Length: 2358 bp
ATGGGTGGTATTGGCAAGACCACCCTTGCCGAGGCTGTATTTCGCAGACACTCTTCTAAATTCGAAGCTTCTTCTTTTCTTAAGAATGTTAGGGAGAACTCAGAACAAGCAAGTGGACTAGATTACTTGGAAAAAACACTTCTTAAGGAGATATTAAAGGAAGAAGGTTCATCCATAGGATCAACTATTGTTCGAGAAAGGCTCAGGCGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGCAATTCTATGCAATTGGAACGTTTAGCTGGCAGTCCTCTCCGGTTTGGCACTGGAAGTAGAATCATTATCACAACTAGAGATAGGGGCACACTTGGGCAAACTGTTGAAGAGGATAATATCTACAAGGTTGAGGAATTAAAACCAGATGATGCTCTTCAGCTCTTCTATTCGCGTACTTTCAAGGATAACAGTACCCGTATAACAGATCATAAGGAGTTGGCAGAAAAGGCGGTGGCTTATGCCAACGGCGTTCCTTTAGCACTTACAGTTCTGGGGTCCTTGTTCTTCAATTGCAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACAATTTCCCAGTGAAGATATTCAGAAAGTGTTGAGAATAAGTTATGATAGATTGAGAGAAAATGAGAAGGAGATATTTCTGGATATAGCATGTTTTCATAAAGGGAAGTCTCTGGTTGAGGTAAAACGAATGTTAGATGTTCGTGGATTCTTTGCGACATCTGGAATTAGAATTCTCATTGAGATGTCTCTCATATCAATTGATTCAAAAACGGACGATTTGCTACAAGAAATGGGAAGGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAGGAAAATTGTTCAAGAACAAGATATTAAAGATCCCGGTAAACGGAATAGGTTGTTCGATGATGATGATTTCTATCGTGTATTGAGGGGTAACATGGAAACTCCAAATGTTGAAGCCATACAGGTTAATTGGAATAAGCTTAAATACCGACCGTTGAAATGTGCAGACTTCAAAAAGATTTCTAACCTAATAATGCTAATTGTGGAGGGTGGCTGCAAATTCACCGCTTCTCTAGACCTTCCTGATTCTCTTCGTTATCTTTATTGGGATCAATATCCATTGGAATCTTTGCCGTCAAATTTTTGTCCGGAAAATCTAGTTGAGCTTCATATGCCATATAGCAGAGTTACTAAGGAGCTTTGGAAAGAAGAGCAGATACTTGTCAACTTACAAGTTATCGATCTGCGGGGTTGTTCAAATCTAACTGAAGTTCCAAATCTCTCTGGGAGTCTAAAAATTGTGCAGATAAATCTCCGGTATTGTAGAAGTTTGGTTGAAATTCCTTCGTATTTTCAACATCTTCACAAGCTTACTCATCTTGATCTTAGTTTATGCACCAGTCTCAAGTATCTTCCAGAGATGCCAGGAAATATTAAATACTTAGATTTACAAAAAAGTGGTATAAAGGAGTTGCCTGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTGAATTTAAGGCAATGCGAAGACCTTAAGAAACTTCCAAGCAGCAGGTGTAAGTTGAAAAATCTTGATCTCGATTCGTGCTATGGATTTGAAAACCTTCCAGAGATTTTGGAGCCAATGGAACATTTGAAGTCCTTAAGTTTAATGCATACAGCAGTTAAAGAGCTACCCTCATCAATATGTGAGTTGAAATATCTTGAGTGTCTTGATCTCTCCAATTGCTTTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGAAGTCCTTAAGTTTAATGCATACAGCAGTTAAAGAGCTACCCTCATCAATCTGTGAGTTGAAATATCTTGAGAGTCTTAGTCTCACCGATTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAGCATTTGGTGTCTCTTAGATTGGACGGCACAGCTGTCCAAATGCTTCCTTCGTCTATTGGAAATCTAAATAGGCTTCAAGATTTAAACCTTAATGGCTGCGAAGAACTTGAGGATGTCCCAACAAGTATCTACAGTTTAGCCAATCTTAAACGTCTCAGCTTTATGCACTGTTGGAGACTTGAAAATTTGCCTTCCAGCCCTGTCGGTTTTCTCTCTTTAGAAGAACTAAACCTCAGCCACAGCGGTATATTGGAAATACCAGCAAGCATCAAACAAGCTTCTCGGTTGTCTATACTCGACTTAAGCTTGTGCGGTCAGCTTCAATCCATACCAGAGCTCCCAGTGCTATGTAATGTTGCAGCTCACTACTGCACGTCGCTGAAGACAGTGTCAAGTTCAAGGACAGCACTCACACAAGCAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

786

Amino Acids

89.58

Weight (kDa)

5.94

Isoelectric Point (pI)

50.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 144 2.3e-16 NB-ARC domain
WHD_ROQ1 PF23282 213 - 293 5.6e-15 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 528 - 599 1.1e-07 Leucine-rich repeat region
LRR_13 PF23286 573 - 620 1.1e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 593 - 696 3.2e-13 Leucine-rich repeat region
LRR_13 PF23286 620 - 704 8.9e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 643 - 744 1.7e-09 Leucine-rich repeat region
LRR_13 PF23286 714 - 777 3.9e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1563
Acc36I ACCTGC 1 cut(s) 1563
AccII CGCG 1 cut(s) 415
AccIII TCCGGA 1 cut(s) 1165
AciI CCGC 5 cut(s) 473, 1083, 1264, 2175, 2244
AclI AACGTT 1 cut(s) 262
AclWI GGATC 3 cut(s) 187, 884, 1134
AcuI CTGAAG 3 cut(s) 383, 1305, 2333
AfaI GTAC 3 cut(s) 211, 418, 436
AfiI CCNNNNNNNGG 2 cut(s) 31, 900
AflII CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
AjiI CACGTC 1 cut(s) 2307
AjnI CCWGG 1 cut(s) 1441
Alw21I GWGCWC 1 cut(s) 2271
Alw26I GTCTC 7 cut(s) 693, 771, 1424, 1883, 1947, 2090, 2101
AlwI GGATC 3 cut(s) 187, 884, 1134
Aor13HI TCCGGA 1 cut(s) 1165
ApeKI GCWGC 4 cut(s) 1071, 1569, 2028, 2291
Asp700I GAANNNNTTC 2 cut(s) 597, 1623
AspS9I GGNCC 2 cut(s) 217, 519
AsuC2I CCSGG 1 cut(s) 894
AsuHPI GGTGA 2 cut(s) 1072, 1873
AsuII TTCGAA 1 cut(s) 63
AvaII GGWCC 2 cut(s) 217, 519
BaeGI GKGCMC 1 cut(s) 332
BanII GRGCYC 1 cut(s) 2271
BarI GAAGNNNNNNTAC 2 cut(s) 1218, 1250
BbsI GAAGAC 2 cut(s) 1554, 2321
Bbv12I GWGCWC 1 cut(s) 2271
BbvCI CCTCAGC 1 cut(s) 2165
BbvI GCAGC 4 cut(s) 1058, 1581, 2015, 2303
BceAI ACGGC 3 cut(s) 505, 1135, 1972
BciT130I CCWGG 1 cut(s) 1443
BcnI CCSGG 1 cut(s) 894
BcoDI GTCTC 7 cut(s) 693, 771, 1424, 1883, 1947, 2090, 2101
BfaI CTAG 5 cut(s) 119, 318, 1091, 1175, 1893
BfmI CTRYAG 1 cut(s) 2062
BfrI CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
BfuAI ACCTGC 1 cut(s) 1563
BisI GCNGC 4 cut(s) 1072, 1570, 2029, 2292
BlsI GCNGC 4 cut(s) 1073, 1571, 2030, 2293
Bme1390I CCNGG 2 cut(s) 894, 1443
Bme18I GGWCC 2 cut(s) 217, 519
BmgBI CACGTC 1 cut(s) 2307
BmgT120I GGNCC 2 cut(s) 217, 519
BmiI GGNNCC 2 cut(s) 520, 1641
BmrFI CCNGG 2 cut(s) 894, 1443
BmrI ACTGGG 2 cut(s) 582, 2267
BmsI GCATC 4 cut(s) 382, 822, 1428, 2208
BmuI ACTGGG 2 cut(s) 582, 2267
BpiI GAAGAC 2 cut(s) 1554, 2321
BplI GAGNNNNNCTC 6 cut(s) 186, 218, 1682, 1714, 1823, 1855
Bpu10I CCTNAGC 2 cut(s) 203, 2165
Bpu14I TTCGAA 1 cut(s) 63
BpuEI CTTGAG 4 cut(s) 1406, 1745, 1886, 2060
BpuMI CCSGG 1 cut(s) 894
Bsa29I ATCGAT 1 cut(s) 1257
BsaBI GATNNNNATC 2 cut(s) 930, 1131
BsaJI CCNNGG 1 cut(s) 30
BsaWI WCCGGW 3 cut(s) 282, 1165, 1332
BsaXI ACNNNNNCTCC 2 cut(s) 2253, 2283
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 900
Bse1I ACTGG 4 cut(s) 298, 588, 1416, 2273
Bse3DI GCAATG 1 cut(s) 1547
Bse8I GATNNNNATC 2 cut(s) 930, 1131
BseAI TCCGGA 1 cut(s) 1165
BseBI CCWGG 1 cut(s) 1443
BseCI ATCGAT 1 cut(s) 1257
BseDI CCNNGG 1 cut(s) 30
BseGI GGATG 2 cut(s) 170, 2050
BseJI GATNNNNATC 2 cut(s) 930, 1131
BseLI CCNNNNNNNGG 2 cut(s) 31, 900
BseMI GCAATG 1 cut(s) 1547
BseMII CTCAG 4 cut(s) 114, 217, 2101, 2179
BseNI ACTGG 4 cut(s) 298, 588, 1416, 2273
BseSI GKGCMC 1 cut(s) 332
BseXI GCAGC 4 cut(s) 1058, 1581, 2015, 2303
BsgI GTGCAG 3 cut(s) 1041, 1340, 2287
Bsh1236I CGCG 1 cut(s) 415
Bsh1285I CGRYCG 1 cut(s) 1010
BshVI ATCGAT 1 cut(s) 1257
BsiEI CGRYCG 1 cut(s) 1010
BsiHKAI GWGCWC 1 cut(s) 2271
BsiSI CCGG 4 cut(s) 283, 894, 1166, 1333
BslFI GGGAC 1 cut(s) 2033
BslI CCNNNNNNNGG 2 cut(s) 31, 900
BsmAI GTCTC 7 cut(s) 693, 771, 1424, 1883, 1947, 2090, 2101
BsmBI CGTCTC 1 cut(s) 2090
BsmFI GGGAC 1 cut(s) 2033
Bsp119I TTCGAA 1 cut(s) 63
Bsp1286I GDGCHC 2 cut(s) 332, 2271
Bsp13I TCCGGA 1 cut(s) 1165
Bsp143I GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
BspACI CCGC 5 cut(s) 473, 1083, 1264, 2175, 2244
BspCNI CTCAG 4 cut(s) 113, 216, 2100, 2178
BspDI ATCGAT 1 cut(s) 1257
BspEI TCCGGA 1 cut(s) 1165
BspFNI CGCG 1 cut(s) 415
BspLI GGNNCC 2 cut(s) 520, 1641
BspMI ACCTGC 1 cut(s) 1563
BspPI GGATC 3 cut(s) 187, 884, 1134
BspQI GCTCTTC 3 cut(s) 402, 410, 1221
BspT104I TTCGAA 1 cut(s) 63
BspTI CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
BsrDI GCAATG 1 cut(s) 1547
BsrI ACTGG 4 cut(s) 298, 588, 1416, 2273
BssECI CCNNGG 1 cut(s) 30
BssMI GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
Bst2UI CCWGG 1 cut(s) 1443
Bst4CI ACNGT 7 cut(s) 346, 434, 511, 1011, 2066, 2102, 2320
Bst6I CTCTTC 6 cut(s) 58, 345, 402, 410, 1113, 1221
BstAFI CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
BstAPI GCANNNNNTGC 1 cut(s) 841
BstBI TTCGAA 1 cut(s) 63
BstC8I GCNNGC 2 cut(s) 271, 2197
BstDEI CTNAG 9 cut(s) 100, 203, 1209, 1403, 1459, 1874, 1946, 2087, 2165
BstENI CCTNNNNNAGG 1 cut(s) 29
BstF5I GGATG 2 cut(s) 170, 2050
BstFNI CGCG 1 cut(s) 415
BstKTI GATC 8 cut(s) 182, 451, 892, 1129, 1261, 1402, 1597, 1738
BstMAI GTCTC 7 cut(s) 693, 771, 1424, 1883, 1947, 2090, 2101
BstMBI GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
BstMCI CGRYCG 1 cut(s) 1010
BstMWI GCNNNNNNNGC 5 cut(s) 470, 841, 1189, 1930, 2275
BstNI CCWGG 1 cut(s) 1443
BstNSI RCATGY 1 cut(s) 672
BstSCI CCNGG 2 cut(s) 892, 1441
BstSFI CTRYAG 1 cut(s) 2062
BstSLI GKGCMC 1 cut(s) 332
BstUI CGCG 1 cut(s) 415
BstV1I GCAGC 4 cut(s) 1058, 1581, 2015, 2303
BstV2I GAAGAC 2 cut(s) 1554, 2321
BstX2I RGATCY 1 cut(s) 889
BstYI RGATCY 1 cut(s) 889
Bsu15I ATCGAT 1 cut(s) 1257
BsuTUI ATCGAT 1 cut(s) 1257
BtrI CACGTC 1 cut(s) 2307
BtsCI GGATG 2 cut(s) 170, 2050
BtsIMutI CAGTG 5 cut(s) 291, 595, 2098, 2280, 2325
BveI ACCTGC 1 cut(s) 1563
Cac8I GCNNGC 2 cut(s) 271, 2197
Cfr13I GGNCC 2 cut(s) 217, 519
ClaI ATCGAT 1 cut(s) 1257
Csp6I GTAC 3 cut(s) 210, 417, 435
CviAII CATG 2 cut(s) 669, 952
CviQI GTAC 3 cut(s) 210, 417, 435
DdeI CTNAG 9 cut(s) 100, 203, 1209, 1403, 1459, 1874, 1946, 2087, 2165
DpnI GATC 8 cut(s) 181, 450, 891, 1128, 1260, 1401, 1596, 1737
DpnII GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
DraI TTTAAA 1 cut(s) 2016
Eam1104I CTCTTC 6 cut(s) 58, 345, 402, 410, 1113, 1221
EarI CTCTTC 6 cut(s) 58, 345, 402, 410, 1113, 1221
Ecl136II GAGCTC 1 cut(s) 2269
Eco24I GRGCYC 1 cut(s) 2271
Eco47I GGWCC 2 cut(s) 217, 519
Eco53kI GAGCTC 1 cut(s) 2269
Eco57I CTGAAG 3 cut(s) 383, 1305, 2333
EcoICRI GAGCTC 1 cut(s) 2269
EcoNI CCTNNNNNAGG 1 cut(s) 29
EcoO109I RGGNCCY 2 cut(s) 217, 519
EcoRI GAATTC 2 cut(s) 563, 750
EcoRII CCWGG 1 cut(s) 1441
EcoT22I ATGCAT 2 cut(s) 1677, 1818
EcoT38I GRGCYC 1 cut(s) 2271
Esp3I CGTCTC 1 cut(s) 2090
FaeI CATG 2 cut(s) 672, 955
FaqI GGGAC 1 cut(s) 2033
FatI CATG 2 cut(s) 668, 951
FauI CCCGC 1 cut(s) 1257
FauNDI CATATG 1 cut(s) 1188
Fnu4HI GCNGC 4 cut(s) 1072, 1570, 2029, 2292
FokI GGATG 2 cut(s) 157, 2057
FriOI GRGCYC 1 cut(s) 2271
Fsp4HI GCNGC 4 cut(s) 1072, 1570, 2029, 2292
FspBI CTAG 5 cut(s) 119, 318, 1091, 1175, 1893
GluI GCNGC 4 cut(s) 1072, 1570, 2029, 2292
HapII CCGG 4 cut(s) 283, 894, 1166, 1333
Hin1II CATG 2 cut(s) 672, 955
HincII GTYRAC 1 cut(s) 1243
HindII GTYRAC 1 cut(s) 1243
HindIII AAGCTT 5 cut(s) 66, 995, 1385, 2208, 2236
HinfI GANTC 9 cut(s) 303, 726, 782, 1103, 1142, 1306, 1496, 1601, 1870
HpaII CCGG 4 cut(s) 283, 894, 1166, 1333
HphI GGTGA 2 cut(s) 1072, 1873
Hpy166II GTNNAC 3 cut(s) 116, 899, 1243
Hpy188I TCNGA 2 cut(s) 103, 603
Hpy8I GTNNAC 3 cut(s) 116, 899, 1243
Hpy99I CGWCG 1 cut(s) 2311
HpyAV CCTTC 9 cut(s) 158, 640, 810, 852, 1106, 1371, 1634, 1989, 2133
HpyCH4III ACNGT 7 cut(s) 346, 434, 511, 1011, 2066, 2102, 2320
HpyCH4IV ACGT 3 cut(s) 262, 2083, 2306
HpyF10VI GCNNNNNNNGC 5 cut(s) 470, 841, 1189, 1930, 2275
HpyF3I CTNAG 9 cut(s) 100, 203, 1209, 1403, 1459, 1874, 1946, 2087, 2165
HpySE526I ACGT 3 cut(s) 262, 2083, 2306
Hsp92II CATG 2 cut(s) 672, 955
Kpn2I TCCGGA 1 cut(s) 1165
Kzo9I GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
LguI GCTCTTC 3 cut(s) 402, 410, 1221
LmnI GCTCC 4 cut(s) 1213, 1639, 1930, 2274
Lsp1109I GCAGC 4 cut(s) 1058, 1581, 2015, 2303
LweI GCATC 4 cut(s) 382, 822, 1428, 2208
MaeI CTAG 5 cut(s) 119, 318, 1091, 1175, 1893
MaeII ACGT 3 cut(s) 262, 2083, 2306
MaeIII GTNAC 2 cut(s) 947, 1204
MalI GATC 8 cut(s) 181, 450, 891, 1128, 1260, 1401, 1596, 1737
MboI GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
MfeI CAATTG 4 cut(s) 254, 532, 777, 1744
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 2 cut(s) 332, 2271
MlyI GAGTC 2 cut(s) 1315, 1879
MmeI TCCRAC 1 cut(s) 2084
Mph1103I ATGCAT 2 cut(s) 1677, 1818
MroI TCCGGA 1 cut(s) 1165
MroXI GAANNNNTTC 2 cut(s) 597, 1623
MslI CAYNNNNRTG 3 cut(s) 761, 830, 1705
MspA1I CMGCKG 2 cut(s) 1964, 2175
MspCI CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
MspI CCGG 4 cut(s) 283, 894, 1166, 1333
MspR9I CCNGG 2 cut(s) 894, 1443
MunI CAATTG 4 cut(s) 254, 532, 777, 1744
MvaI CCWGG 1 cut(s) 1443
MvnI CGCG 1 cut(s) 415
MwoI GCNNNNNNNGC 5 cut(s) 470, 841, 1189, 1930, 2275
NciI CCSGG 1 cut(s) 894
NdeI CATATG 1 cut(s) 1188
NdeII GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
NlaIII CATG 2 cut(s) 672, 955
NlaIV GGNNCC 2 cut(s) 520, 1641
NmeAIII GCCGAG 1 cut(s) 55
NsiI ATGCAT 2 cut(s) 1677, 1818
NspI RCATGY 1 cut(s) 672
NspV TTCGAA 1 cut(s) 63
PaqCI CACCTGC 1 cut(s) 1563
PciSI GCTCTTC 3 cut(s) 402, 410, 1221
PdmI GAANNNNTTC 2 cut(s) 597, 1623
PfeI GAWTC 7 cut(s) 303, 726, 782, 1103, 1142, 1496, 1601
PflFI GACNNNGTC 1 cut(s) 2320
PkrI GCNGC 4 cut(s) 1073, 1571, 2030, 2293
PleI GAGTC 2 cut(s) 1314, 1878
PpsI GAGTC 2 cut(s) 1314, 1878
PpuMI RGGWCCY 2 cut(s) 217, 519
Psp124BI GAGCTC 1 cut(s) 2271
Psp1406I AACGTT 1 cut(s) 262
Psp5II RGGWCCY 2 cut(s) 217, 519
Psp6I CCWGG 1 cut(s) 1441
PspGI CCWGG 1 cut(s) 1441
PspN4I GGNNCC 2 cut(s) 520, 1641
PspPI GGNCC 2 cut(s) 217, 519
PspPPI RGGWCCY 2 cut(s) 217, 519
PsuI RGATCY 1 cut(s) 889
PsyI GACNNNGTC 1 cut(s) 2320
PvuII CAGCTG 1 cut(s) 1964
RsaI GTAC 3 cut(s) 211, 418, 436
RsaNI GTAC 3 cut(s) 210, 417, 435
RseI CAYNNNNRTG 3 cut(s) 761, 830, 1705
SacI GAGCTC 1 cut(s) 2271
SapI GCTCTTC 3 cut(s) 402, 410, 1221
SatI GCNGC 4 cut(s) 1072, 1570, 2029, 2292
Sau3AI GATC 8 cut(s) 179, 448, 889, 1126, 1258, 1399, 1594, 1735
Sau96I GGNCC 2 cut(s) 217, 519
SchI GAGTC 2 cut(s) 1315, 1879
ScrFI CCNGG 2 cut(s) 894, 1443
SduI GDGCHC 2 cut(s) 332, 2271
SfaNI GCATC 4 cut(s) 382, 822, 1428, 2208
SfcI CTRYAG 1 cut(s) 2062
SfuI TTCGAA 1 cut(s) 63
SinI GGWCC 2 cut(s) 217, 519
SmiMI CAYNNNNRTG 3 cut(s) 761, 830, 1705
SsiI CCGC 5 cut(s) 473, 1083, 1264, 2175, 2244
SspI AATATT 2 cut(s) 1450, 1519
SspMI CTAG 5 cut(s) 119, 318, 1091, 1175, 1893
SstI GAGCTC 1 cut(s) 2271
StyD4I CCNGG 2 cut(s) 892, 1441
TaaI ACNGT 7 cut(s) 346, 434, 511, 1011, 2066, 2102, 2320
TaiI ACGT 3 cut(s) 265, 2086, 2309
TaqI TCGA 6 cut(s) 63, 193, 915, 1257, 1599, 2229
TfiI GAWTC 7 cut(s) 303, 726, 782, 1103, 1142, 1496, 1601
TscAI CASTG 5 cut(s) 298, 595, 2105, 2280, 2325
TseI GCWGC 4 cut(s) 1071, 1569, 2028, 2291
TspDTI ATGAA 4 cut(s) 159, 576, 665, 1175
TspGWI ACGGA 2 cut(s) 806, 916
TspRI CASTG 5 cut(s) 298, 595, 2105, 2280, 2325
Tth111I GACNNNGTC 1 cut(s) 2320
Vha464I CTTAAG 6 cut(s) 80, 143, 1553, 1663, 1804, 2233
VpaK11BI GGWCC 2 cut(s) 217, 519
XagI CCTNNNNNAGG 1 cut(s) 29
XbaI TCTAGA 2 cut(s) 1090, 1892
XceI RCATGY 1 cut(s) 672
XmnI GAANNNNTTC 2 cut(s) 597, 1623
XspI CTAG 5 cut(s) 119, 318, 1091, 1175, 1893
Zsp2I ATGCAT 2 cut(s) 1677, 1818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.