RLG00000026224

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
1371300 .. 1377124
5825 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026224

Sequence Viewer

Length: 1998 bp
ATGACTGCTGCTTCTTCTTGCTCTGCTATTATCGCCCGGGAGAAGTATGATGTATTTCTTAGTTTCAGAGGTGAGGACACCCGGAATACTTTCACCAGCCATCTTTATGAGGCTTTATGTCGGAACAAAATCCAAACTTACAAAGATGATGAGGAACTGGAGAGAGGAGATGATATCTCACCTGCCCTTCACAAAGCAATCAGCGAATCGAAGCTTTCGGTTATCATTTTCTCCAAAAACTATGCTTCTTCCACATGGTGTTTGGATGAACTTTTGCACATACTCCAAGGCAGAGGTTCACAGTTTGTTATACCCATCTTCTACGGCTTAGATCCATCAGATGTACGCAAACAATCAGGGAGTTATGCAGATGCATTTGTTATACATGAGGAACGTTTCAAGGCCATGATGGACAAGGTGCTCAGGTGGAGAAGTGCTTTGACAACAGCAGCTAATATATCTGGGTTTGATTCCCAAACAATTAGGCCCGAGTCTGAATTAGTTAAGATTGTGGTCAATGACATTTTGGCCAAGTTGAATGGCAAATCGCAAATCGCAAGTGGTTTAGAGGGCCTGGTTGGAATAGAAAAACACATTCAACAAGTTGAATCGTTATTATGCCTTGACTCGCTGGATGTCCAGATTGTAGGTATTTGGGGTATGGGTGGTATTGGTAAGACCACCATTGCTGATGTTGTATTTCACCGTCTCTCTTCTCAATTCGAAGCTTGCTGCTTTATTGCAAATGTCAGGGAAGCATCAGAGACCAAACATGGACTAAATGATTTGCGAAATCAACTGTTTCGTACCGGAACTGAAGCAATTGAATGTTTAGTCATGAGCATGGACCCCATTTCAGACCTTTACATAAAACCTTCAGTCTTCAAAAAGATGCATAATCTAAGATTACTTCAGTTACAGTTTGAGGGTTACTATTACTGGGACTCGAAGTCATGCGTCAACAAAGTTCACCTTTCTCAAGGTCTCAGGTGTCTTCCTCAAGCCCTTAGAATTCTGTACTGGGATGGCTTCCCTTTGAATTCTCTGCCATCAAAGTTTTGTCCAGACAATCTTGTTGAGCTTCGTATGCGCAACAGTCGACTTAAGCGACTTTGGAATAAAGGCCTGCAGATCAATCTTAGGAGCTTAAAACATATTGATCTTAGTGGCTCTGAGCACCTGGCTGATGTTTCAGCTCTATTTGAGAGTCCAAATTTGGAGAGGATTGTTCTTGAAGGTTGTAAAAGTTTGGTTCAACTTCCTTCATTTTTTCAGTATCTTGCCAAGCTTACTTGTCTCAGTCTGTCTCGCTGCTCCAATCTCAAAATTCTTTCTGAGATGCCAGGCAATCTGAAAGTCTTAGAGTTGGGAGGGACTGCAATAGAAGAATTGCCTTCATCAATTTGGTCTCTCGAGAAGCTTGATACATTGAAGCTCGGAGAATGTAAAGATCTTAAGAATCTTCCAAGCAGCACTTGTAGGTTGAACTCGCTCCGATCTCTTAGTCTAAGTGCATGGAGCAACATAATGGCTGATGCGCAGCTTAGAGTTATGCTATTTGCAGCTGCATCACAATTCAATAAATTTAATTGGAGAGCAGAACTTAAAATTGTTTGTCCGGGAAATGAAATTCCAAAGTGGTTGAGCTATCAAAGTGAGGGATGTTCGATAAATATCAAGCTTCCTCCATATTGGTTTCGTCAAGGCTTCATGGATTATGCTCTATGCATTGTGGTTGCATTCAACAACTTTACGCCGCCACCCGATATTGAAAATTTCCACATTAGGTGTCAAACCCATTGCAAAACTAACAATGGTGACTACCTTCCTCACCAAAATTTGTGGGAGAACCTCGGAAATGTCAATTCAGATCATAATGAGTCAGATTGTAATAGTGCTGAGAGAAGAGTACGAATCAAGCCATCTTCCAAGGTTGGAAGCGATGATAAACCTCCACTGTACAGAGTGAGAGTTGGTTCAGTATTTCCACATCTCTAG

Protein Analysis

666

Amino Acids

75.17

Weight (kDa)

7.96

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 15 - 195 3.4e-55 TIR domain
TIR_2 PF13676 18 - 124 1.8e-14 TIR domain
NB-ARC PF00931 196 - 257 1.6e-07 NB-ARC domain
LRR_14 PF23598 450 - 508 8.5e-08 Leucine-rich repeat region
C-JID PF20160 539 - 632 5.1e-15 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 190
Acc16I TGCGCA 2 cut(s) 1091, 1539
Acc36I ACCTGC 1 cut(s) 190
AccI GTMKAC 1 cut(s) 1099
AciI CCGC 1 cut(s) 1757
AclI AACGTT 1 cut(s) 394
AclWI GGATC 1 cut(s) 326
AcoI YGGCCR 1 cut(s) 528
AcsI RAATTY 8 cut(s) 1011, 1039, 1213, 1326, 1583, 1629, 1774, 1837
AcuI CTGAAG 3 cut(s) 837, 861, 896
AdeI CACNNNGTG 1 cut(s) 258
AfaI GTAC 5 cut(s) 345, 808, 1019, 1911, 1961
AflII CTTAAG 2 cut(s) 1103, 1454
AhdI GACNNNNNGTC 1 cut(s) 949
AjnI CCWGG 3 cut(s) 573, 1179, 1342
Alw21I GWGCWC 2 cut(s) 423, 1179
Alw26I GTCTC 6 cut(s) 713, 758, 989, 1301, 1311, 1413
AlwI GGATC 1 cut(s) 326
Ama87I CYCGRG 3 cut(s) 36, 488, 1412
AoxI GGCC 5 cut(s) 402, 485, 528, 571, 1123
ApeKI GCWGC 8 cut(s) 8, 449, 732, 1311, 1470, 1540, 1562, 1565
ApoI RAATTY 8 cut(s) 1011, 1039, 1213, 1326, 1583, 1629, 1774, 1837
Asp700I GAANNNNTTC 1 cut(s) 89
AspLEI GCGC 2 cut(s) 1092, 1540
AspS9I GGNCC 3 cut(s) 486, 571, 847
AsuC2I CCSGG 4 cut(s) 37, 38, 82, 1620
AsuHPI GGTGA 7 cut(s) 83, 85, 171, 695, 962, 1823, 1829
AsuII TTCGAA 1 cut(s) 723
AvaI CYCGRG 3 cut(s) 36, 488, 1412
AvaII GGWCC 1 cut(s) 847
BalI TGGCCA 1 cut(s) 530
BbsI GAAGAC 2 cut(s) 874, 986
Bbv12I GWGCWC 2 cut(s) 423, 1179
BbvI GCAGC 7 cut(s) 461, 719, 1298, 1482, 1552, 1552, 1574
BccI CCATC 7 cut(s) 108, 323, 343, 403, 1019, 1057, 1930
BceAI ACGGC 1 cut(s) 340
BciT130I CCWGG 3 cut(s) 575, 1181, 1344
BcnI CCSGG 4 cut(s) 37, 38, 82, 1620
BcoDI GTCTC 6 cut(s) 713, 758, 989, 1301, 1311, 1413
BfaI CTAG 1 cut(s) 1996
BfmI CTRYAG 1 cut(s) 1127
BfrI CTTAAG 2 cut(s) 1103, 1454
BfuAI ACCTGC 1 cut(s) 190
BglII AGATCT 1 cut(s) 1450
BisI GCNGC 9 cut(s) 9, 450, 733, 1312, 1471, 1541, 1563, 1566, 1757
BlsI GCNGC 9 cut(s) 10, 451, 734, 1313, 1472, 1542, 1564, 1567, 1758
Bme1390I CCNGG 7 cut(s) 37, 38, 82, 575, 1181, 1344, 1620
Bme18I GGWCC 1 cut(s) 847
BmeRI GACNNNNNGTC 1 cut(s) 949
BmeT110I CYCGRG 3 cut(s) 36, 488, 1412
BmgT120I GGNCC 3 cut(s) 486, 571, 847
BmiI GGNNCC 1 cut(s) 849
BmrFI CCNGG 7 cut(s) 37, 38, 82, 575, 1181, 1344, 1620
BmrI ACTGGG 2 cut(s) 949, 1030
BmsI GCATC 6 cut(s) 361, 767, 882, 1329, 1525, 1577
BmuI ACTGGG 2 cut(s) 949, 1030
BpiI GAAGAC 2 cut(s) 874, 986
BpmI CTGGAG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 422
Bpu14I TTCGAA 1 cut(s) 723
BpuEI CTTGAG 2 cut(s) 963, 984
BpuMI CCSGG 4 cut(s) 37, 38, 82, 1620
BsaBI GATNNNNATC 1 cut(s) 1673
BsaI GGTCTC 3 cut(s) 758, 989, 1413
BsaJI CCNNGG 4 cut(s) 36, 286, 1852, 1929
BsaWI WCCGGW 1 cut(s) 809
Bse1I ACTGG 3 cut(s) 162, 944, 1025
Bse3DI GCAATG 2 cut(s) 684, 1798
Bse8I GATNNNNATC 1 cut(s) 1673
BseBI CCWGG 3 cut(s) 575, 1181, 1344
BseDI CCNNGG 4 cut(s) 36, 286, 1852, 1929
BseGI GGATG 4 cut(s) 271, 640, 1030, 1667
BseJI GATNNNNATC 1 cut(s) 1673
BseMI GCAATG 2 cut(s) 684, 1798
BseMII CTCAG 6 cut(s) 436, 1000, 1164, 1312, 1326, 1890
BseNI ACTGG 3 cut(s) 162, 944, 1025
BseRI GAGGAG 1 cut(s) 180
BseXI GCAGC 7 cut(s) 461, 719, 1298, 1482, 1552, 1552, 1574
BshFI GGCC 5 cut(s) 404, 487, 530, 573, 1125
BsiHKAI GWGCWC 2 cut(s) 423, 1179
BsiHKCI CYCGRG 3 cut(s) 36, 488, 1412
BsiSI CCGG 4 cut(s) 37, 82, 810, 1619
BslFI GGGAC 2 cut(s) 956, 1387
BsmAI GTCTC 6 cut(s) 713, 758, 989, 1301, 1311, 1413
BsmBI CGTCTC 1 cut(s) 713
BsmFI GGGAC 2 cut(s) 956, 1387
BsmI GAATGC 1 cut(s) 1739
BsnI GGCC 5 cut(s) 404, 487, 530, 573, 1125
Bso31I GGTCTC 3 cut(s) 758, 989, 1413
BsoBI CYCGRG 3 cut(s) 36, 488, 1412
Bsp119I TTCGAA 1 cut(s) 723
Bsp1286I GDGCHC 2 cut(s) 423, 1179
Bsp1407I TGTACA 1 cut(s) 1959
Bsp143I GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
BspACI CCGC 1 cut(s) 1757
BspANI GGCC 5 cut(s) 404, 487, 530, 573, 1125
BspCNI CTCAG 6 cut(s) 435, 999, 1165, 1311, 1327, 1891
BspHI TCATGA 1 cut(s) 837
BspLI GGNNCC 1 cut(s) 849
BspMAI CTGCAG 1 cut(s) 1131
BspMI ACCTGC 1 cut(s) 190
BspPI GGATC 1 cut(s) 326
BspT104I TTCGAA 1 cut(s) 723
BspTI CTTAAG 2 cut(s) 1103, 1454
BspTNI GGTCTC 3 cut(s) 758, 989, 1413
BsrDI GCAATG 2 cut(s) 684, 1798
BsrGI TGTACA 1 cut(s) 1959
BsrI ACTGG 3 cut(s) 162, 944, 1025
BssECI CCNNGG 4 cut(s) 36, 286, 1852, 1929
BssMI GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
BssT1I CCWWGG 2 cut(s) 286, 1929
Bst2UI CCWGG 3 cut(s) 575, 1181, 1344
Bst4CI ACNGT 6 cut(s) 303, 707, 801, 921, 1097, 1959
Bst6I CTCTTC 2 cut(s) 718, 1900
BstAFI CTTAAG 2 cut(s) 1103, 1454
BstAUI TGTACA 1 cut(s) 1959
BstBI TTCGAA 1 cut(s) 723
BstC8I GCNNGC 2 cut(s) 730, 1127
BstF5I GGATG 4 cut(s) 271, 640, 1030, 1667
BstHHI GCGC 2 cut(s) 1092, 1540
BstKTI GATC 6 cut(s) 334, 1134, 1162, 1453, 1499, 1873
BstMAI GTCTC 6 cut(s) 713, 758, 989, 1301, 1311, 1413
BstMBI GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
BstMWI GCNNNNNNNGC 2 cut(s) 32, 1087
BstNI CCWGG 3 cut(s) 575, 1181, 1344
BstSCI CCNGG 7 cut(s) 35, 36, 80, 573, 1179, 1342, 1618
BstSFI CTRYAG 1 cut(s) 1127
BstV1I GCAGC 7 cut(s) 461, 719, 1298, 1482, 1552, 1552, 1574
BstV2I GAAGAC 2 cut(s) 874, 986
BstX2I RGATCY 2 cut(s) 331, 1450
BstYI RGATCY 2 cut(s) 331, 1450
BsuRI GGCC 5 cut(s) 404, 487, 530, 573, 1125
BtgZI GCGATG 1 cut(s) 1956
BtsCI GGATG 4 cut(s) 271, 640, 1030, 1667
BtsIMutI CAGTG 1 cut(s) 1955
BveI ACCTGC 1 cut(s) 190
Cac8I GCNNGC 2 cut(s) 730, 1127
CciI TCATGA 1 cut(s) 837
CfoI GCGC 2 cut(s) 1092, 1540
Cfr13I GGNCC 3 cut(s) 486, 571, 847
Cfr9I CCCGGG 1 cut(s) 36
CseI GACGC 1 cut(s) 946
Csp6I GTAC 5 cut(s) 344, 807, 1018, 1910, 1960
CspCI CAANNNNNGTGG 2 cut(s) 1823, 1858
CviAII CATG 9 cut(s) 255, 386, 406, 773, 838, 844, 954, 1515, 1711
CviQI GTAC 5 cut(s) 344, 807, 1018, 1910, 1960
DpnI GATC 6 cut(s) 333, 1133, 1161, 1452, 1498, 1872
DpnII GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
DraIII CACNNNGTG 1 cut(s) 258
DriI GACNNNNNGTC 1 cut(s) 949
EaeI YGGCCR 1 cut(s) 528
Eam1104I CTCTTC 2 cut(s) 718, 1900
Eam1105I GACNNNNNGTC 1 cut(s) 949
EarI CTCTTC 2 cut(s) 718, 1900
Eco130I CCWWGG 2 cut(s) 286, 1929
Eco147I AGGCCT 1 cut(s) 1125
Eco31I GGTCTC 3 cut(s) 758, 989, 1413
Eco32I GATATC 1 cut(s) 175
Eco47I GGWCC 1 cut(s) 847
Eco57I CTGAAG 3 cut(s) 837, 861, 896
Eco88I CYCGRG 3 cut(s) 36, 488, 1412
EcoO109I RGGNCCY 1 cut(s) 571
EcoRI GAATTC 2 cut(s) 1011, 1039
EcoRII CCWGG 3 cut(s) 573, 1179, 1342
EcoRV GATATC 1 cut(s) 175
EcoT14I CCWWGG 2 cut(s) 286, 1929
EcoT22I ATGCAT 3 cut(s) 376, 897, 1730
ErhI CCWWGG 2 cut(s) 286, 1929
Esp3I CGTCTC 1 cut(s) 713
FaeI CATG 9 cut(s) 258, 389, 409, 776, 841, 847, 957, 1518, 1714
FalI AAGNNNNNCTT 4 cut(s) 957, 989, 1459, 1491
FaqI GGGAC 2 cut(s) 956, 1387
FatI CATG 9 cut(s) 254, 385, 405, 772, 837, 843, 953, 1514, 1710
FblI GTMKAC 1 cut(s) 1099
Fnu4HI GCNGC 9 cut(s) 9, 450, 733, 1312, 1471, 1541, 1563, 1566, 1757
FokI GGATG 4 cut(s) 278, 647, 1037, 1674
Fsp4HI GCNGC 9 cut(s) 9, 450, 733, 1312, 1471, 1541, 1563, 1566, 1757
FspBI CTAG 1 cut(s) 1996
FspI TGCGCA 2 cut(s) 1091, 1539
GlaI GCGC 2 cut(s) 1091, 1539
GluI GCNGC 9 cut(s) 9, 450, 733, 1312, 1471, 1541, 1563, 1566, 1757
GsuI CTGGAG 1 cut(s) 179
HaeIII GGCC 5 cut(s) 404, 487, 530, 573, 1125
HapII CCGG 4 cut(s) 37, 82, 810, 1619
HgaI GACGC 1 cut(s) 946
HhaI GCGC 2 cut(s) 1092, 1540
Hin1II CATG 9 cut(s) 258, 389, 409, 776, 841, 847, 957, 1518, 1714
Hin6I GCGC 2 cut(s) 1090, 1538
HinP1I GCGC 2 cut(s) 1090, 1538
HincII GTYRAC 2 cut(s) 961, 1100
HindII GTYRAC 2 cut(s) 961, 1100
HindIII AAGCTT 5 cut(s) 212, 726, 1286, 1418, 1679
HpaII CCGG 4 cut(s) 37, 82, 810, 1619
HphI GGTGA 7 cut(s) 83, 85, 171, 695, 962, 1823, 1829
Hpy166II GTNNAC 4 cut(s) 299, 961, 970, 1100
Hpy188III TCNNGA 6 cut(s) 640, 838, 1064, 1232, 1412, 1414
Hpy8I GTNNAC 4 cut(s) 299, 961, 970, 1100
HpyAV CCTTC 6 cut(s) 197, 885, 1229, 1272, 1404, 1835
HpyCH4III ACNGT 6 cut(s) 303, 707, 801, 921, 1097, 1959
HpyCH4IV ACGT 1 cut(s) 394
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 1087
HpySE526I ACGT 1 cut(s) 394
Hsp92II CATG 9 cut(s) 258, 389, 409, 776, 841, 847, 957, 1518, 1714
HspAI GCGC 2 cut(s) 1090, 1538
Kzo9I GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
LmnI GCTCC 4 cut(s) 1143, 1319, 1497, 1518
Lsp1109I GCAGC 7 cut(s) 461, 719, 1298, 1482, 1552, 1552, 1574
LweI GCATC 6 cut(s) 361, 767, 882, 1329, 1525, 1577
MaeI CTAG 1 cut(s) 1996
MaeII ACGT 1 cut(s) 394
MaeIII GTNAC 3 cut(s) 915, 929, 1817
MalI GATC 6 cut(s) 333, 1133, 1161, 1452, 1498, 1872
MboI GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
MfeI CAATTG 1 cut(s) 822
MflI RGATCY 2 cut(s) 331, 1450
MhlI GDGCHC 2 cut(s) 423, 1179
MlsI TGGCCA 1 cut(s) 530
MluNI TGGCCA 1 cut(s) 530
MlyI GAGTC 5 cut(s) 500, 620, 938, 1216, 1889
MmeI TCCRAC 3 cut(s) 101, 559, 1915
Mox20I TGGCCA 1 cut(s) 530
Mph1103I ATGCAT 3 cut(s) 376, 897, 1730
MroXI GAANNNNTTC 1 cut(s) 89
MscI TGGCCA 1 cut(s) 530
MseI TTAA 6 cut(s) 504, 1104, 1148, 1455, 1587, 1605
MslI CAYNNNNRTG 2 cut(s) 105, 842
Msp20I TGGCCA 1 cut(s) 530
MspA1I CMGCKG 1 cut(s) 1565
MspCI CTTAAG 2 cut(s) 1103, 1454
MspI CCGG 4 cut(s) 37, 82, 810, 1619
MspR9I CCNGG 7 cut(s) 37, 38, 82, 575, 1181, 1344, 1620
MunI CAATTG 1 cut(s) 822
Mva1269I GAATGC 1 cut(s) 1739
MvaI CCWGG 3 cut(s) 575, 1181, 1344
MwoI GCNNNNNNNGC 2 cut(s) 32, 1087
NciI CCSGG 4 cut(s) 37, 38, 82, 1620
NdeII GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
NlaIII CATG 9 cut(s) 258, 389, 409, 776, 841, 847, 957, 1518, 1714
NlaIV GGNNCC 1 cut(s) 849
NmuCI GTSAC 1 cut(s) 1817
NsbI TGCGCA 2 cut(s) 1091, 1539
NsiI ATGCAT 3 cut(s) 376, 897, 1730
NspV TTCGAA 1 cut(s) 723
PaeR7I CTCGAG 1 cut(s) 1412
PagI TCATGA 1 cut(s) 837
PaqCI CACCTGC 1 cut(s) 190
PceI AGGCCT 1 cut(s) 1125
PcsI WCGNNNNNNNCGW 1 cut(s) 1105
PctI GAATGC 1 cut(s) 1739
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 5 cut(s) 206, 470, 608, 1459, 1914
PfoI TCCNGGA 1 cut(s) 1618
PkrI GCNGC 9 cut(s) 10, 451, 734, 1313, 1472, 1542, 1564, 1567, 1758
PleI GAGTC 5 cut(s) 499, 620, 938, 1215, 1888
PpsI GAGTC 5 cut(s) 499, 620, 938, 1215, 1888
Psp1406I AACGTT 1 cut(s) 394
Psp6I CCWGG 3 cut(s) 573, 1179, 1342
PspGI CCWGG 3 cut(s) 573, 1179, 1342
PspN4I GGNNCC 1 cut(s) 849
PspPI GGNCC 3 cut(s) 486, 571, 847
PstI CTGCAG 1 cut(s) 1131
PsuI RGATCY 2 cut(s) 331, 1450
PvuII CAGCTG 1 cut(s) 1565
RsaI GTAC 5 cut(s) 345, 808, 1019, 1911, 1961
RsaNI GTAC 5 cut(s) 344, 807, 1018, 1910, 1960
RseI CAYNNNNRTG 2 cut(s) 105, 842
SalI GTCGAC 1 cut(s) 1098
SaqAI TTAA 6 cut(s) 504, 1104, 1148, 1455, 1587, 1605
SatI GCNGC 9 cut(s) 9, 450, 733, 1312, 1471, 1541, 1563, 1566, 1757
Sau3AI GATC 6 cut(s) 331, 1131, 1159, 1450, 1496, 1870
Sau96I GGNCC 3 cut(s) 486, 571, 847
SchI GAGTC 5 cut(s) 500, 620, 938, 1216, 1889
ScrFI CCNGG 7 cut(s) 37, 38, 82, 575, 1181, 1344, 1620
SduI GDGCHC 2 cut(s) 423, 1179
SfaNI GCATC 6 cut(s) 361, 767, 882, 1329, 1525, 1577
SfcI CTRYAG 1 cut(s) 1127
Sfr274I CTCGAG 1 cut(s) 1412
SfuI TTCGAA 1 cut(s) 723
SinI GGWCC 1 cut(s) 847
SlaI CTCGAG 1 cut(s) 1412
SmaI CCCGGG 1 cut(s) 38
SmiMI CAYNNNNRTG 2 cut(s) 105, 842
SmlI CTYRAG 5 cut(s) 978, 999, 1103, 1412, 1454
SmoI CTYRAG 5 cut(s) 978, 999, 1103, 1412, 1454
SseBI AGGCCT 1 cut(s) 1125
SsiI CCGC 1 cut(s) 1757
SspMI CTAG 1 cut(s) 1996
StuI AGGCCT 1 cut(s) 1125
StyD4I CCNGG 7 cut(s) 35, 36, 80, 573, 1179, 1342, 1618
StyI CCWWGG 2 cut(s) 286, 1929
TaaI ACNGT 6 cut(s) 303, 707, 801, 921, 1097, 1959
TaiI ACGT 1 cut(s) 397
TaqI TCGA 6 cut(s) 209, 723, 947, 1099, 1413, 1667
TatI WGTACW 2 cut(s) 1017, 1959
TauI GCSGC 1 cut(s) 1759
TfiI GAWTC 5 cut(s) 206, 470, 608, 1459, 1914
Tru1I TTAA 6 cut(s) 504, 1104, 1148, 1455, 1587, 1605
Tru9I TTAA 6 cut(s) 504, 1104, 1148, 1455, 1587, 1605
TscAI CASTG 1 cut(s) 1962
TseFI GTSAC 1 cut(s) 1817
TseI GCWGC 8 cut(s) 8, 449, 732, 1311, 1470, 1540, 1562, 1565
Tsp45I GTSAC 1 cut(s) 1817
TspDTI ATGAA 5 cut(s) 282, 1254, 1386, 1641, 1699
TspMI CCCGGG 1 cut(s) 36
TspRI CASTG 1 cut(s) 1962
Vha464I CTTAAG 2 cut(s) 1103, 1454
VpaK11BI GGWCC 1 cut(s) 847
XapI RAATTY 8 cut(s) 1011, 1039, 1213, 1326, 1583, 1629, 1774, 1837
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 1412
XmaI CCCGGG 1 cut(s) 36
XmiI GTMKAC 1 cut(s) 1099
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 1 cut(s) 1996
Zsp2I ATGCAT 3 cut(s) 376, 897, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.