pycom10g11950

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
15534117 .. 15538306
4190 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11950.1

Sequence Viewer

Length: 2910 bp
ATGTGGTTCAGATCGTTAACCTTTTCTTCTTCTTCGTCTTCTGCTGCTGATTCCGCAGCTGGTGATGCAGACGATGTTGAAATCCCCCCTCTTCGGGAAAAGTATGATGTGTTCATCAGTTTCAGAGGTGAGGACACCCGACGTGGCATCACCAGCCATCTTCACCAGGCCTTAGAACAGAGCAAAATTGAAACCTACATAGATGACAGACTTCAGAGAGGAGAAGAAATTGGACCTTCCCTTGTAGAAGCAATAGAGAAATCTAGGCTTTCGGTGATCATTTTCTCAAAAAACTACCCTTCTTCCACGTGGTGTTTGAAGGAACTTGTGCACATACTCAAATGTAAGGAAAGATATGGCCAGATGGTTATACCCGTATTCTACGACATCAGTCCATCGGATATACGAAACCAACAGGGGAGCTATGCGGTTGCATTTGCTGGACTTGAAAAACGTTTCAAGGACAGTATCGATAAGGTTCAAGAGTGGAGGAATGCTTTGACGAATGCAGCCAATCTATCTGGGTTTGATTACTCAAGCAATCCCTGGGGACAAACTTTTGTTAGGGAAAGCCTCAGTCGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAAATGGACCATTTAGCTGGCAAGCGTCAGTATGGCACTGGAAGTAGAATCATTATCACGAGTAGAGATAGGAGGACGCTTAGGCCAACTGTTGAAGAGGATAAGATCTACAAGGTTGAGGGATTAAAACCGGATGACGCTCTTCGGCTCTTCTGTTCCCGTGCTTTCAAGAATAACAGTACTCCTATAACAGATTATAAGGGGTTGGCAGAAAAGGCGGTGGATTATGCTGGAGGCATTCCTTTAGCTCTCGTACTTCTGGGGTCCTCATTTCTAAACTGCAAGAGCAAAGAAGAATGTGAAGATGAATTGAACAAATTGAAAGAATTTCCCAATGAAAATATCCATAAAGTGTTGAGACTGAGTTATGATAGATTGGGAAGAAATGAGAAGGAGATATTTCTGGATATAGCATGTTTTCATAAAGGGAATGATGTTGATGAGGTAAAACGAATGTTAGATGTTCGTGGATTCTTTGCGGTTGGCGGAATTAGAGTTCTCGTTGATATGTCTCTCATATCAATTCATTCAACAGAGAAAACAATAGAGATGCATGATCTGCTACAAGAAATGGGAAGCACAATTGTTCTCGAACAGTGTATTGAAGATCCTGGTCAACGGAGTAGGTTGTTCAAGGATGAGGATGTCAGTCGTGTACTACAAAATAACACGGAGTTGCCTGATTCAGTTTGGTCTCACGAAAAAATTTCTTACTTGGATATAAGACGATGTAAAGACCTTAAGAAACTTCCAAGCAACAAGTGTAAGCTGAAAATCTCCGGTTGTTTTTATCTATGTTTCTGCACATCTCTTGGCCAGGTTTCTGAGCTTCCCAGGAATATAAGTGAATTATCATTGGCTGATTGCAAGAGACTTGTGCGCCTCCCAACCGACATTTGTAAGTTAAAATCTCTCAAGAAACTCAATCTCTCTGGGTGCTCTAAACTTGGAAACTTCCCAGAGATCTTGGAGCCCATGGAACATTTGGAATATCTTAATCTAAAGAAAACAGCCGTTCAAGAGCTACACTCATCAATCGAGTTTCTCCCTGCTCTCAAAGAAATTGAATTATTGTCTTGCACAAGGCTTTCAAGTATCCCGAGTAGTATCTACAGTTTAACCAACCTTAAAACTCTCAGGTTTCGTTACTGTCGGGAACTCAAAGAGTTGCCGTCTGGCTCGATTCGTTTGCTATCTTTGAAAGTTCTAGACCTCCATAGCACCCGCATATCAGAAATCCCTGATGGTCTCGTTGGCTCAACCTCATTGCAAGATTTGGATCTGGGTAGAAGCATGATCAGGAGCATACCTGCAAGCATCAAACAAGCTTCTCAGTTGCGTAGACTAAGCTTAATTGGGTGCAAGCGGCTTCAATCATTACCAGAGCTCCCAGTGCCATGTAATCTTGAAGCTGAAGGCTGCACGTCGCTGAAGACAGTGCCAAGTTCAAGGACAGCACTCACACAAGGTTGGGATAAATACACATACTTCGGGAAGCGTGATTTTTTGAATTGCCGAAAATTGGATCATAATGCAAGAAGCAACATAATGGATGAAGCACAACTTATATTTATGCGAATTGCAACTAATTCAAGAAAGGAACCTTGGACATCTAGGTTTAGGGTTGTATGTCCGGGAAAAGAAATTCCAAAGTGGTTCAGCTTCAACTATCAAGGTGAGGGATCTTCAGTCCATATCAAGCTTCCTCCAGAGTTTATTCGAACAGGTTTGTTGGGCTTCGTTCTCTCTATTGTTGTTTCTTGTGTTTCCAACTGCAATAAATGGTTTGTAATAAGAGCTAGGTGCAATGTCAAATCCCTGGGTGAAAGCCATGAACTGTTCACTTCTTTCTCCTTTGTCGGACGAAAGAGCCGGATATTGAATGACTGCTGTGACGACGGACAAGATCACGTGTACATGTGGTATGAAAGCGTTATAAGTGAAAAGGAAGCAGAAATGTGCTCCCCTGATGTTTACAAACTTGCAAATGAGGCCTCTGTTGAATTCTGCGTGGACGATTTTAAGTGCACTCCCATTTCCAGCGTGAAGGTGAAAAAATGTGGTATATGGCCGTTGTATGCGGAAGATGTTGAGAAATTCAAACTATCTGGGGAACCAAAAATACAAGAAGAAACAAGAGAAGATGAAACTTGGGAAGCCAGTGGATCAAGTTATAAGAATAGAGCAAATGAAAGTGATGATGAGTCAGAAGCCAGTGAATCAAGTTGTGATTCGTTTACAGGTGTTGAGTTAGCCACCATATTATACTTTGGGCGTTTTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

970

Amino Acids

109.88

Weight (kDa)

6.64

Isoelectric Point (pI)

47.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 34 - 188 9.3e-48 TIR domain
TIR_2 PF13676 37 - 146 1.3e-14 TIR domain
NB-ARC PF00931 186 - 268 1.1e-09 NB-ARC domain
WHD_ROQ1 PF23282 337 - 407 1.5e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 510 - 595 7.3e-08 Leucine-rich repeat region
LRR_13 PF23286 510 - 682 1.6e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
C-JID PF20160 752 - 906 1.6e-12 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 822, 2561, 2799
Acc36I ACCTGC 1 cut(s) 1942
AccI GTMKAC 1 cut(s) 1966
AciI CCGC 8 cut(s) 54, 428, 842, 1103, 1110, 1849, 1990, 2705
AclI AACGTT 1 cut(s) 454
AclWI GGATC 5 cut(s) 1226, 1911, 2157, 2314, 2797
AcoI YGGCCR 3 cut(s) 358, 1438, 2693
AcsI RAATTY 5 cut(s) 950, 1329, 2268, 2627, 2720
AcuI CTGAAG 4 cut(s) 197, 2058, 2075, 2295
AcvI CACGTG 2 cut(s) 309, 2536
AdeI CACNNNGTG 1 cut(s) 312
AfaI GTAC 5 cut(s) 583, 805, 879, 1281, 2540
AfiI CCNNNNNNNGG 3 cut(s) 93, 94, 2146
AflII CTTAAG 1 cut(s) 1364
AflIII ACRYGT 2 cut(s) 2535, 2541
AjiI CACGTC 2 cut(s) 143, 2049
AjnI CCWGG 6 cut(s) 165, 545, 1234, 1440, 1457, 2442
AjuI GAANNNNNNNTTGG 2 cut(s) 2212, 2244
AloI GAACNNNNNNTCC 2 cut(s) 1104, 1136
Alw21I GWGCWC 5 cut(s) 333, 1565, 2013, 2588, 2654
Alw26I GTCTC 5 cut(s) 976, 1140, 1323, 1489, 1877
Alw44I GTGCAC 2 cut(s) 329, 2650
AlwI GGATC 5 cut(s) 1226, 1911, 2157, 2314, 2797
Ama87I CYCGRG 1 cut(s) 1723
AoxI GGCC 6 cut(s) 168, 358, 707, 1438, 2616, 2693
ApaLI GTGCAC 2 cut(s) 329, 2650
ApeKI GCWGC 4 cut(s) 44, 56, 509, 2043
ApoI RAATTY 5 cut(s) 950, 1329, 2268, 2627, 2720
AspLEI GCGC 1 cut(s) 1506
AspS9I GGNCC 4 cut(s) 233, 589, 631, 888
AsuC2I CCSGG 1 cut(s) 2259
AsuHPI GGTGA 8 cut(s) 74, 140, 142, 155, 286, 2312, 2459, 2686
AsuII TTCGAA 1 cut(s) 2344
AvaI CYCGRG 1 cut(s) 1723
AvaII GGWCC 4 cut(s) 233, 589, 631, 888
BaeGI GKGCMC 2 cut(s) 333, 2654
BalI TGGCCA 2 cut(s) 360, 1440
BanII GRGCYC 2 cut(s) 1599, 2013
BauI CACGAG 1 cut(s) 682
BbrPI CACGTG 2 cut(s) 309, 2536
BbsI GAAGAC 2 cut(s) 30, 2063
Bbv12I GWGCWC 5 cut(s) 333, 1565, 2013, 2588, 2654
BbvI GCAGC 4 cut(s) 31, 68, 521, 2030
BccI CCATC 4 cut(s) 165, 358, 403, 1862
BceAI ACGGC 3 cut(s) 1622, 1780, 2680
BcgI CGANNNNNNTGC 2 cut(s) 1795, 1829
BciT130I CCWGG 6 cut(s) 167, 547, 1236, 1442, 1459, 2444
BciVI GTATCC 1 cut(s) 1730
BclI TGATCA 2 cut(s) 276, 1920
BcnI CCSGG 1 cut(s) 2259
BcoDI GTCTC 5 cut(s) 976, 1140, 1323, 1489, 1877
BfaI CTAG 4 cut(s) 264, 1832, 2238, 2424
BfmI CTRYAG 1 cut(s) 1735
BfrI CTTAAG 1 cut(s) 1364
BfuAI ACCTGC 1 cut(s) 1942
BfuI GTATCC 1 cut(s) 1730
BglII AGATCT 2 cut(s) 729, 1587
BisI GCNGC 5 cut(s) 45, 57, 510, 1991, 2044
BlsI GCNGC 5 cut(s) 46, 58, 511, 1992, 2045
BmcAI AGTACT 1 cut(s) 805
Bme1390I CCNGG 7 cut(s) 167, 547, 1236, 1442, 1459, 2259, 2444
Bme18I GGWCC 4 cut(s) 233, 589, 631, 888
BmeT110I CYCGRG 1 cut(s) 1723
BmgBI CACGTC 2 cut(s) 143, 2049
BmgT120I GGNCC 4 cut(s) 233, 589, 631, 888
BmiI GGNNCC 4 cut(s) 889, 1596, 2226, 2739
BmrFI CCNGG 7 cut(s) 167, 547, 1236, 1442, 1459, 2259, 2444
BmrI ACTGGG 1 cut(s) 2009
BmsI GCATC 4 cut(s) 55, 156, 1164, 1950
BmuI ACTGGG 1 cut(s) 2009
BoxI GACNNNNGTC 1 cut(s) 390
BpiI GAAGAC 2 cut(s) 30, 2063
BplI GAGNNNNNCTC 2 cut(s) 1637, 1669
BpmI CTGGAG 2 cut(s) 876, 2316
Bpu10I CCTNAGC 1 cut(s) 704
Bpu14I TTCGAA 1 cut(s) 2344
BpuEI CTTGAG 2 cut(s) 520, 1523
BpuMI CCSGG 1 cut(s) 2259
Bsa29I ATCGAT 1 cut(s) 471
BsaAI YACGTR 2 cut(s) 309, 2536
BsaBI GATNNNNATC 1 cut(s) 1902
BsaI GGTCTC 2 cut(s) 1323, 1877
BsaJI CCNNGG 7 cut(s) 545, 546, 1457, 1599, 2228, 2442, 2443
BsaWI WCCGGW 2 cut(s) 754, 1403
BsaXI ACNNNNNCTCC 2 cut(s) 1995, 2025
Bsc4I CCNNNNNNNGG 3 cut(s) 93, 94, 2146
Bse1I ACTGG 4 cut(s) 667, 2015, 2784, 2838
Bse3DI GCAATG 2 cut(s) 1889, 2437
Bse8I GATNNNNATC 1 cut(s) 1902
BseBI CCWGG 6 cut(s) 167, 547, 1236, 1442, 1459, 2444
BseCI ATCGAT 1 cut(s) 471
BseDI CCNNGG 7 cut(s) 545, 546, 1457, 1599, 2228, 2442, 2443
BseGI GGATG 4 cut(s) 763, 1267, 1273, 2182
BseJI GATNNNNATC 1 cut(s) 1902
BseLI CCNNNNNNNGG 3 cut(s) 93, 94, 2146
BseMI GCAATG 2 cut(s) 1889, 2437
BseMII CTCAG 5 cut(s) 589, 977, 1440, 1774, 1970
BseNI ACTGG 4 cut(s) 667, 2015, 2784, 2838
BseRI GAGGAG 1 cut(s) 234
BseSI GKGCMC 2 cut(s) 333, 2654
BseXI GCAGC 4 cut(s) 31, 68, 521, 2030
BsgI GTGCAG 2 cut(s) 1411, 2029
BshFI GGCC 6 cut(s) 170, 360, 709, 1440, 2618, 2695
BshVI ATCGAT 1 cut(s) 471
BsiHKAI GWGCWC 5 cut(s) 333, 1565, 2013, 2588, 2654
BsiHKCI CYCGRG 1 cut(s) 1723
BsiSI CCGG 4 cut(s) 755, 1404, 2258, 2497
BslFI GGGAC 1 cut(s) 564
BslI CCNNNNNNNGG 3 cut(s) 93, 94, 2146
BsmAI GTCTC 5 cut(s) 976, 1140, 1323, 1489, 1877
BsmFI GGGAC 1 cut(s) 564
BsmI GAATGC 3 cut(s) 499, 511, 861
BsnI GGCC 6 cut(s) 170, 360, 709, 1440, 2618, 2695
Bso31I GGTCTC 2 cut(s) 1323, 1877
BsoBI CYCGRG 1 cut(s) 1723
Bsp119I TTCGAA 1 cut(s) 2344
Bsp1286I GDGCHC 6 cut(s) 333, 1565, 1599, 2013, 2588, 2654
Bsp1407I TGTACA 1 cut(s) 2538
Bsp19I CCATGG 1 cut(s) 1599
BspACI CCGC 8 cut(s) 54, 428, 842, 1103, 1110, 1849, 1990, 2705
BspANI GGCC 6 cut(s) 170, 360, 709, 1440, 2618, 2695
BspCNI CTCAG 5 cut(s) 588, 978, 1441, 1773, 1969
BspDI ATCGAT 1 cut(s) 471
BspLI GGNNCC 4 cut(s) 889, 1596, 2226, 2739
BspMI ACCTGC 1 cut(s) 1942
BspPI GGATC 5 cut(s) 1226, 1911, 2157, 2314, 2797
BspQI GCTCTTC 2 cut(s) 771, 779
BspT104I TTCGAA 1 cut(s) 2344
BspTI CTTAAG 1 cut(s) 1364
BspTNI GGTCTC 2 cut(s) 1323, 1877
BsrDI GCAATG 2 cut(s) 1889, 2437
BsrGI TGTACA 1 cut(s) 2538
BsrI ACTGG 4 cut(s) 667, 2015, 2784, 2838
BssECI CCNNGG 7 cut(s) 545, 546, 1457, 1599, 2228, 2442, 2443
BssSI CACGAG 1 cut(s) 682
BssT1I CCWWGG 2 cut(s) 1599, 2228
Bst2BI CACGAG 1 cut(s) 682
Bst2UI CCWGG 6 cut(s) 167, 547, 1236, 1442, 1459, 2444
Bst4CI ACNGT 8 cut(s) 467, 715, 803, 1221, 1739, 1775, 2062, 2463
Bst6I CTCTTC 4 cut(s) 96, 714, 771, 779
BstAFI CTTAAG 1 cut(s) 1364
BstAPI GCANNNNNTGC 1 cut(s) 1183
BstAUI TGTACA 1 cut(s) 2538
BstBAI YACGTR 2 cut(s) 309, 2536
BstBI TTCGAA 1 cut(s) 2344
BstC8I GCNNGC 4 cut(s) 643, 647, 1939, 1988
BstDEI CTNAG 8 cut(s) 172, 575, 704, 986, 1449, 1760, 1956, 1970
BstDSI CCRYGG 1 cut(s) 1599
BstF5I GGATG 4 cut(s) 763, 1267, 1273, 2182
BstHHI GCGC 1 cut(s) 1506
BstMAI GTCTC 5 cut(s) 976, 1140, 1323, 1489, 1877
BstMWI GCNNNNNNNGC 7 cut(s) 53, 65, 153, 839, 1183, 2017, 2615
BstNI CCWGG 6 cut(s) 167, 547, 1236, 1442, 1459, 2444
BstNSI RCATGY 2 cut(s) 1041, 2545
BstPAI GACNNNNGTC 1 cut(s) 390
BstSCI CCNGG 7 cut(s) 165, 545, 1234, 1440, 1457, 2257, 2442
BstSFI CTRYAG 1 cut(s) 1735
BstSLI GKGCMC 2 cut(s) 333, 2654
BstV1I GCAGC 4 cut(s) 31, 68, 521, 2030
BstV2I GAAGAC 2 cut(s) 30, 2063
BstX2I RGATCY 5 cut(s) 729, 1231, 1587, 1903, 2306
BstXI CCANNNNNNTGG 1 cut(s) 641
BstYI RGATCY 5 cut(s) 729, 1231, 1587, 1903, 2306
Bsu15I ATCGAT 1 cut(s) 471
BsuI GTATCC 1 cut(s) 1730
BsuRI GGCC 6 cut(s) 170, 360, 709, 1440, 2618, 2695
BsuTUI ATCGAT 1 cut(s) 471
BtgI CCRYGG 1 cut(s) 1599
BtrI CACGTC 2 cut(s) 143, 2049
BtsCI GGATG 4 cut(s) 763, 1267, 1273, 2182
BtsIMutI CAGTG 6 cut(s) 660, 1226, 2022, 2067, 2791, 2845
BveI ACCTGC 1 cut(s) 1942
Cac8I GCNNGC 4 cut(s) 643, 647, 1939, 1988
CfoI GCGC 1 cut(s) 1506
Cfr13I GGNCC 4 cut(s) 233, 589, 631, 888
ClaI ATCGAT 1 cut(s) 471
CseI GACGC 3 cut(s) 638, 709, 770
Csp6I GTAC 5 cut(s) 582, 804, 878, 1280, 2539
CviAII CATG 7 cut(s) 1038, 1178, 1600, 1918, 2022, 2456, 2542
CviQI GTAC 5 cut(s) 582, 804, 878, 1280, 2539
DdeI CTNAG 8 cut(s) 172, 575, 704, 986, 1449, 1760, 1956, 1970
DraIII CACNNNGTG 1 cut(s) 312
EaeI YGGCCR 3 cut(s) 358, 1438, 2693
Eam1104I CTCTTC 4 cut(s) 96, 714, 771, 779
EarI CTCTTC 4 cut(s) 96, 714, 771, 779
EciI GGCGGA 1 cut(s) 1125
Ecl136II GAGCTC 1 cut(s) 2011
Eco130I CCWWGG 2 cut(s) 1599, 2228
Eco147I AGGCCT 2 cut(s) 170, 2618
Eco24I GRGCYC 2 cut(s) 1599, 2013
Eco31I GGTCTC 2 cut(s) 1323, 1877
Eco47I GGWCC 4 cut(s) 233, 589, 631, 888
Eco53kI GAGCTC 1 cut(s) 2011
Eco57I CTGAAG 4 cut(s) 197, 2058, 2075, 2295
Eco72I CACGTG 2 cut(s) 309, 2536
Eco88I CYCGRG 1 cut(s) 1723
EcoICRI GAGCTC 1 cut(s) 2011
EcoO109I RGGNCCY 2 cut(s) 589, 888
EcoRI GAATTC 1 cut(s) 2627
EcoRII CCWGG 6 cut(s) 165, 545, 1234, 1440, 1457, 2442
EcoT14I CCWWGG 2 cut(s) 1599, 2228
EcoT22I ATGCAT 1 cut(s) 1179
EcoT38I GRGCYC 2 cut(s) 1599, 2013
ErhI CCWWGG 2 cut(s) 1599, 2228
FaeI CATG 7 cut(s) 1041, 1181, 1603, 1921, 2025, 2459, 2545
FalI AAGNNNNNCTT 2 cut(s) 2172, 2204
FaqI GGGAC 1 cut(s) 564
FatI CATG 7 cut(s) 1037, 1177, 1599, 1917, 2021, 2455, 2541
FauI CCCGC 1 cut(s) 1856
FbaI TGATCA 2 cut(s) 276, 1920
FblI GTMKAC 1 cut(s) 1966
Fnu4HI GCNGC 5 cut(s) 45, 57, 510, 1991, 2044
FokI GGATG 4 cut(s) 770, 1274, 1280, 2189
FriOI GRGCYC 2 cut(s) 1599, 2013
Fsp4HI GCNGC 5 cut(s) 45, 57, 510, 1991, 2044
FspBI CTAG 4 cut(s) 264, 1832, 2238, 2424
GlaI GCGC 1 cut(s) 1505
GluI GCNGC 5 cut(s) 45, 57, 510, 1991, 2044
GsuI CTGGAG 2 cut(s) 876, 2316
HaeIII GGCC 6 cut(s) 170, 360, 709, 1440, 2618, 2695
HapII CCGG 4 cut(s) 755, 1404, 2258, 2497
HgaI GACGC 3 cut(s) 638, 709, 770
HhaI GCGC 1 cut(s) 1506
Hin1II CATG 7 cut(s) 1041, 1181, 1603, 1921, 2025, 2459, 2545
Hin6I GCGC 1 cut(s) 1504
HinP1I GCGC 1 cut(s) 1504
HincII GTYRAC 2 cut(s) 18, 1241
HindII GTYRAC 2 cut(s) 18, 1241
HindIII AAGCTT 3 cut(s) 1950, 1972, 2324
HinfI GANTC 9 cut(s) 50, 617, 672, 1095, 1307, 1807, 2828, 2843, 2855
HpaI GTTAAC 1 cut(s) 18
HpaII CCGG 4 cut(s) 755, 1404, 2258, 2497
HphI GGTGA 8 cut(s) 74, 140, 142, 155, 286, 2312, 2459, 2686
Hpy188I TCNGA 8 cut(s) 11, 125, 216, 400, 1450, 1858, 2486, 2833
Hpy99I CGWCG 3 cut(s) 144, 2053, 2525
HpyAV CCTTC 6 cut(s) 246, 309, 313, 1009, 2033, 2665
HpyCH4III ACNGT 8 cut(s) 467, 715, 803, 1221, 1739, 1775, 2062, 2463
HpyCH4IV ACGT 5 cut(s) 142, 308, 454, 2048, 2535
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 65, 153, 839, 1183, 2017, 2615
HpyF3I CTNAG 8 cut(s) 172, 575, 704, 986, 1449, 1760, 1956, 1970
HpySE526I ACGT 5 cut(s) 142, 308, 454, 2048, 2535
Hsp92II CATG 7 cut(s) 1041, 1181, 1603, 1921, 2025, 2459, 2545
HspAI GCGC 1 cut(s) 1504
Ksp22I TGATCA 2 cut(s) 276, 1920
KspAI GTTAAC 1 cut(s) 18
LguI GCTCTTC 2 cut(s) 771, 779
LmnI GCTCC 5 cut(s) 420, 1594, 1926, 2016, 2591
Lsp1109I GCAGC 4 cut(s) 31, 68, 521, 2030
LweI GCATC 4 cut(s) 55, 156, 1164, 1950
MaeI CTAG 4 cut(s) 264, 1832, 2238, 2424
MaeII ACGT 5 cut(s) 142, 308, 454, 2048, 2535
MaeIII GTNAC 2 cut(s) 1769, 2516
MfeI CAATTG 1 cut(s) 1206
MflI RGATCY 5 cut(s) 729, 1231, 1587, 1903, 2306
MhlI GDGCHC 6 cut(s) 333, 1565, 1599, 2013, 2588, 2654
MlsI TGGCCA 2 cut(s) 360, 1440
MluNI TGGCCA 2 cut(s) 360, 1440
MlyI GAGTC 1 cut(s) 2837
MmeI TCCRAC 2 cut(s) 2418, 2464
Mox20I TGGCCA 2 cut(s) 360, 1440
Mph1103I ATGCAT 1 cut(s) 1179
MscI TGGCCA 2 cut(s) 360, 1440
MseI TTAA 9 cut(s) 17, 749, 1365, 1529, 1620, 1742, 1752, 1976, 2646
Msp20I TGGCCA 2 cut(s) 360, 1440
MspA1I CMGCKG 1 cut(s) 59
MspCI CTTAAG 1 cut(s) 1364
MspI CCGG 4 cut(s) 755, 1404, 2258, 2497
MspR9I CCNGG 7 cut(s) 167, 547, 1236, 1442, 1459, 2259, 2444
MunI CAATTG 1 cut(s) 1206
Mva1269I GAATGC 3 cut(s) 499, 511, 861
MvaI CCWGG 6 cut(s) 167, 547, 1236, 1442, 1459, 2444
MwoI GCNNNNNNNGC 7 cut(s) 53, 65, 153, 839, 1183, 2017, 2615
NciI CCSGG 1 cut(s) 2259
NcoI CCATGG 1 cut(s) 1599
NlaIII CATG 7 cut(s) 1041, 1181, 1603, 1921, 2025, 2459, 2545
NlaIV GGNNCC 4 cut(s) 889, 1596, 2226, 2739
NmuCI GTSAC 1 cut(s) 2516
NsiI ATGCAT 1 cut(s) 1179
NspI RCATGY 2 cut(s) 1041, 2545
NspV TTCGAA 1 cut(s) 2344
PasI CCCWGGG 2 cut(s) 546, 2443
PceI AGGCCT 2 cut(s) 170, 2618
PciI ACATGT 1 cut(s) 2541
PciSI GCTCTTC 2 cut(s) 771, 779
PctI GAATGC 3 cut(s) 499, 511, 861
PfeI GAWTC 8 cut(s) 50, 617, 672, 1095, 1307, 1807, 2843, 2855
PfoI TCCNGGA 1 cut(s) 2257
PkrI GCNGC 5 cut(s) 46, 58, 511, 1992, 2045
PleI GAGTC 1 cut(s) 2836
PmaCI CACGTG 2 cut(s) 309, 2536
PmlI CACGTG 2 cut(s) 309, 2536
PpsI GAGTC 1 cut(s) 2836
Ppu21I YACGTR 2 cut(s) 309, 2536
PpuMI RGGWCCY 2 cut(s) 589, 888
PscI ACATGT 1 cut(s) 2541
PshAI GACNNNNGTC 1 cut(s) 390
PsiI TTATAA 3 cut(s) 822, 2561, 2799
Psp124BI GAGCTC 1 cut(s) 2013
Psp1406I AACGTT 1 cut(s) 454
Psp5II RGGWCCY 2 cut(s) 589, 888
Psp6I CCWGG 6 cut(s) 165, 545, 1234, 1440, 1457, 2442
PspCI CACGTG 2 cut(s) 309, 2536
PspGI CCWGG 6 cut(s) 165, 545, 1234, 1440, 1457, 2442
PspN4I GGNNCC 4 cut(s) 889, 1596, 2226, 2739
PspPI GGNCC 4 cut(s) 233, 589, 631, 888
PspPPI RGGWCCY 2 cut(s) 589, 888
PsrI GAACNNNNNNTAC 4 cut(s) 95, 127, 2730, 2762
PsuI RGATCY 5 cut(s) 729, 1231, 1587, 1903, 2306
PvuII CAGCTG 1 cut(s) 59
RsaI GTAC 5 cut(s) 583, 805, 879, 1281, 2540
RsaNI GTAC 5 cut(s) 582, 804, 878, 1280, 2539
SacI GAGCTC 1 cut(s) 2013
SapI GCTCTTC 2 cut(s) 771, 779
SaqAI TTAA 9 cut(s) 17, 749, 1365, 1529, 1620, 1742, 1752, 1976, 2646
SatI GCNGC 5 cut(s) 45, 57, 510, 1991, 2044
Sau96I GGNCC 4 cut(s) 233, 589, 631, 888
ScaI AGTACT 1 cut(s) 805
SchI GAGTC 1 cut(s) 2837
ScrFI CCNGG 7 cut(s) 167, 547, 1236, 1442, 1459, 2259, 2444
SduI GDGCHC 6 cut(s) 333, 1565, 1599, 2013, 2588, 2654
SfaNI GCATC 4 cut(s) 55, 156, 1164, 1950
SfcI CTRYAG 1 cut(s) 1735
SfuI TTCGAA 1 cut(s) 2344
SinI GGWCC 4 cut(s) 233, 589, 631, 888
SmlI CTYRAG 3 cut(s) 535, 1364, 1538
SmoI CTYRAG 3 cut(s) 535, 1364, 1538
SseBI AGGCCT 2 cut(s) 170, 2618
SsiI CCGC 8 cut(s) 54, 428, 842, 1103, 1110, 1849, 1990, 2705
SspMI CTAG 4 cut(s) 264, 1832, 2238, 2424
SstI GAGCTC 1 cut(s) 2013
StuI AGGCCT 2 cut(s) 170, 2618
StyD4I CCNGG 7 cut(s) 165, 545, 1234, 1440, 1457, 2257, 2442
StyI CCWWGG 2 cut(s) 1599, 2228
TaaI ACNGT 8 cut(s) 467, 715, 803, 1221, 1739, 1775, 2062, 2463
TaiI ACGT 5 cut(s) 145, 311, 457, 2051, 2538
TaqI TCGA 5 cut(s) 471, 1215, 1662, 1805, 2344
TatI WGTACW 3 cut(s) 803, 1279, 2538
TauI GCSGC 1 cut(s) 1993
TfiI GAWTC 8 cut(s) 50, 617, 672, 1095, 1307, 1807, 2843, 2855
Tru1I TTAA 9 cut(s) 17, 749, 1365, 1529, 1620, 1742, 1752, 1976, 2646
Tru9I TTAA 9 cut(s) 17, 749, 1365, 1529, 1620, 1742, 1752, 1976, 2646
TscAI CASTG 6 cut(s) 667, 1226, 2022, 2067, 2791, 2845
TseFI GTSAC 1 cut(s) 2516
TseI GCWGC 4 cut(s) 44, 56, 509, 2043
Tsp45I GTSAC 1 cut(s) 2516
TspGWI ACGGA 3 cut(s) 1258, 1310, 2538
TspRI CASTG 6 cut(s) 667, 1226, 2022, 2067, 2791, 2845
Vha464I CTTAAG 1 cut(s) 1364
VneI GTGCAC 2 cut(s) 329, 2650
VpaK11BI GGWCC 4 cut(s) 233, 589, 631, 888
XapI RAATTY 5 cut(s) 950, 1329, 2268, 2627, 2720
XbaI TCTAGA 1 cut(s) 1831
XceI RCATGY 2 cut(s) 1041, 2545
XcmI CCANNNNNNNNNTGG 1 cut(s) 1606
XmiI GTMKAC 1 cut(s) 1966
XspI CTAG 4 cut(s) 264, 1832, 2238, 2424
ZrmI AGTACT 1 cut(s) 805
Zsp2I ATGCAT 1 cut(s) 1179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.