FvH4_3g15720

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
9893051 .. 9896763
3713 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15720.t1

Sequence Viewer

Length: 3036 bp
ATGGCTAAGAGGTCCCAGACCAAGTTAAAGATGCCTCAAGTTAGTGGCAGACACTTGAAACTTGAGAGCGTGTGGACCAAACATGCATTATCAAGTTACGGTGTAAGGTGTAGCGCAAAGTTTGATGAGTCACTTCATATGGCATGCTTCATTCAACGGTCGATGAAAGCAATAATTGGTGACCTCTGCTACGATATGGCTGCTGCTTCTTCTTGCTCTGCTATCAAACCTTTGGAGAAGCATGATGTATTTCTTAGTTTCAGAGGCGACACCCGGCGTACTTTCACTAGCCATCTTTATGAAGCTTTATGTCGGACCAAGATCCAAACATACATAGATGACAAACTGGAGAGAGGAGATGACATCGCACCTGCCCTTCGGGAAGCAATCAGTGAATCGAAGCTTTCGGTTATCATTTTCTCCGAAAACTATGCTTCTTCTTCGTGGTGCTTGGATGAACTTGTGCACATACTTGAATTCAGACATTCACAGTTTGTTATACCCATCTTCTACGGTGTAGATCCATCATATGTACGCAAACAATCAGGGAGTTATGCGGATGCATTTGTTGAACATGAGAAACGTTTCGAAGACTACAAGTTGCTCGCATGGAGAGATGCTTTGACAACAGCAGCGAATATATCTGGATTTGATTCTCAAACAATTAGTTTGGAGGCTGAATTAGTTAAGCTTGTGGTCAAGGACATTTTGGCGAAACTGAATCGAAAATCGCAGATGACAAGTGGTTTAGAGGGTAAGGTTGGAATCGAAAAACACGTTCAAAAAGTTGAATCGTTATTATGCCTTGAGTCAGAAGATGTCCGGACCGTTGGTATTTGGGGTATGGGTGGTATCGGTAAGTCTACTATTGCTGAGGTTGTATTTGATCGTCTCTCTTCTCAGTTCGAAGCCTACCACTTTATTCCAAATGTCAGGGAAGCATCAGAGACGAGACAAGGACTAAATGAGTTGCGAAATCAACTGCTTTGTATCCTACTTAAGGAAGAAAATCTACATGTGGCCACTCCATCTATTGGATCAACGTTTGTGAGACAGAGACTTAGCCGTACAAAGGTCCTTGTTGTTCTTGATGATGTGAGTGATTTAGATCAAATAGAATTTTTGGTTGGAGGTGATCGTATCCAGTTTGGCCCTGGAAGTAGAATCATTGTGACAGCTAGAAATAAGCGCTCATTTGGTGTTGATAATATGATATATAAGGTTAGGGAGCTAGATTGTGATCAAGCTCTTGACCTCTTTCATTTGAGAGCTTTAAGACAACTTTCTCCCACAACGGATTATGCAACTTTGTCAAGAGAGGTGGTAGATTATGCTGGAGGCAATCCATTAGCTCTTACAGTATTGGGCTCTGTATTCTCTCATTGCAAGAGCAAAGAAGACTGGAAAAGTGAATTAGATAAACTGAAAAAATATTCAGACACAAAAATCCATAATGTATTGAGGTTTAGTTATGATGGATTAGGAAAAAATGAGAGGGAGATATTTCTTGATATTGCCTGTTACCACAAAGGAAAATATACTCATGAGGCAGAAAGGATTTTAGAAGCCTGTGGTTTTTCTGCCAATGCAGGAGTGAGACTTCTCACTGATATGTCTCTCATCTCCGTGGAAGGTTCATATATTCAGATGCATGATCTGATACAAGAAATGGGTCGGAAAATTGTTTGTGATGATAAAAATCCTGGACAACGGAGTAGATTGTGGTGTGCTAATGAAATTTGTGGTGTACTGAAAAAAAAAAGGGGTACTAAAGCCATTGAGTGCATAGTCATGAACATGAAGGATCTCAATACAGATTTTCACGTGAATGCTGCATCCTTCGAAGAGATGGATAGTCTGAGATTACTAGATTTATACGACCCACACTGGAACCCACTCTGGCACCCCCAGGGTGTCAAGAAAGTGCACCTTCTCCCAGGTTTTGAGTTTCTCCCTGAGTCCCTTAAATATCTGAGATGGGACTTCTATCCTCTGCCATCTATGCCATCGAGGTTTTCTTCAGAAAATCTTGTCGAGCTTTGTATGCGCAACAGCCGACTTGTGCAACTTTGGAATAAAGACGTGCAGATTGATCTTGGGAGCTTAAAACGCATCGATCTTGAAGCGTCGCAGCACCTGGCTGAGCTTCCAGATCTCTCTGGGAGTCCAAATCTCGAGAGCATTAATCTTGAAGGGTGTTCAAGTTTGGTTCAACTCCCTTCGTCTTTTCAGCATCATGCCAAGCTTACTCATCTTAATCTGGATGGCTGCTCCAGTCTCAAAATTCTTCCACAAATGCCGGGCAATCTGGAAATCTTAGAATTGAAGTGGACTGCAATAGTAGAGTTGCCTTCCTCAATCTGGTCTCTCGAGAAGCTTAAAGCCTTGGGTATTAGTAATTGTAAAGAGCTTAAGAATCTTCCAAGCAGCACTTGTAGGCTGAACTCGCTCCGATTTCTTCATATAGATAGCTGCCTCTCTCTTGAGACTTCGCCACTCGAGCTACCTGCTGGGCTGGACTCCCTGCGCTTGAGAGGTTGCAAGAATCTTGACTCTTTGTCACTCGAGCTCCCTTCTGGGCTGAAAAGACTGTATTTGATAGGTTGCGAGAGTCTCGGGTCTTTGCCACTCGAGCTACCTGCTGGGCTGTACTACCTGGACTTGAGAGGTTGCGAGAGTCTCGGGTCTTTGCCACTCGAGCTACCTGCTGGGCTGGACTACCTGGACTTGAGAGGTTGCAAGAATCTTGACTCTTTGCCACTCGAGCTCCCTTCTGGGCTGAAAAGACTGGATTTGACAGGTTGCGAGAGTCTCGGGTCTTTGCCACTCGAGCTACCTGCTGGGCTGGACTACCTGGACTTGAGAGGTTGCAAGAATCTTGACTCTTTGCCACTCGAGCTCCCTTCTGGGCTGAAAACACTGGATTTGACAGGTTGCGAGAGTCTCGGGTCTTTGCCACTCGAGCTACCTGCTGGGCTGAAAGAACTGGACTTGAGTGGTTGCAAGAATCTTGACTCTTCACCGAAGCTGCCATGA

Protein Analysis

1012

Amino Acids

113.11

Weight (kDa)

6.06

Isoelectric Point (pI)

48.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 80 - 250 4.7e-52 TIR domain
TIR_2 PF13676 83 - 189 3.1e-13 TIR domain
NB-ARC PF00931 257 - 425 3.1e-14 NB-ARC domain
WHD_ROQ1 PF23282 496 - 563 8.2e-19 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 752 - 842 6.1e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 379
Acc16I TGCGCA 1 cut(s) 2048
Acc36I ACCTGC 6 cut(s) 379, 2515, 2647, 2713, 2845, 2977
AccB1I GGYRCC 1 cut(s) 1902
AccB7I CCANNNNNTGG 1 cut(s) 1034
AccI GTMKAC 1 cut(s) 863
AccIII TCCGGA 1 cut(s) 822
AciI CCGC 1 cut(s) 557
AclI AACGTT 2 cut(s) 583, 1043
AclWI GGATC 4 cut(s) 316, 515, 1045, 1812
AcoI YGGCCR 1 cut(s) 1020
AcsI RAATTY 4 cut(s) 476, 1118, 1737, 2283
AcuI CTGAAG 1 cut(s) 2004
AcvI CACGTG 1 cut(s) 1825
AfaI GTAC 6 cut(s) 280, 534, 1069, 1749, 1768, 2651
AfeI AGCGCT 1 cut(s) 1190
AfiI CCNNNNNNNGG 4 cut(s) 1000, 1034, 1072, 2361
AflII CTTAAG 2 cut(s) 998, 2411
AflIII ACRYGT 2 cut(s) 775, 1015
AhdI GACNNNNNGTC 1 cut(s) 2557
AjiI CACGTC 1 cut(s) 2083
AjnI CCWGG 8 cut(s) 1153, 1702, 1908, 1936, 2136, 2655, 2721, 2853
AjuI GAANNNNNNNTTGG 2 cut(s) 1110, 1142
Alw21I GWGCWC 5 cut(s) 468, 1929, 2571, 2769, 2901
Alw44I GTGCAC 2 cut(s) 464, 1925
AlwI GGATC 4 cut(s) 316, 515, 1045, 1812
AlwNI CAGNNNCTG 1 cut(s) 2137
Aor13HI TCCGGA 1 cut(s) 822
Aor51HI AGCGCT 1 cut(s) 1190
AoxI GGCC 2 cut(s) 1020, 1150
ApaLI GTGCAC 2 cut(s) 464, 1925
ApeKI GCWGC 9 cut(s) 200, 203, 632, 1832, 2131, 2268, 2427, 2472, 3028
ApoI RAATTY 4 cut(s) 476, 1118, 1737, 2283
AseI ATTAAT 1 cut(s) 2184
Asp700I GAANNNNTTC 1 cut(s) 584
AspLEI GCGC 4 cut(s) 116, 1191, 2049, 2529
AspS9I GGNCC 6 cut(s) 12, 75, 315, 825, 1075, 1151
AsuC2I CCSGG 2 cut(s) 274, 2301
AsuHPI GGTGA 3 cut(s) 191, 1145, 3012
AsuII TTCGAA 3 cut(s) 588, 906, 1842
AvaII GGWCC 5 cut(s) 12, 75, 315, 825, 1075
BaeGI GKGCMC 2 cut(s) 468, 1929
BalI TGGCCA 1 cut(s) 1022
BanI GGYRCC 1 cut(s) 1902
BanII GRGCYC 4 cut(s) 1370, 2571, 2769, 2901
BarI GAAGNNNNNNTAC 2 cut(s) 996, 1028
BbrPI CACGTG 1 cut(s) 1825
BbsI GAAGAC 2 cut(s) 597, 1404
Bbv12I GWGCWC 5 cut(s) 468, 1929, 2571, 2769, 2901
BbvCI CCTCAGC 1 cut(s) 873
BbvI GCAGC 9 cut(s) 187, 190, 644, 1819, 2143, 2255, 2439, 2459, 3015
BceAI ACGGC 1 cut(s) 1050
BciT130I CCWGG 8 cut(s) 1155, 1704, 1910, 1938, 2138, 2657, 2723, 2855
BciVI GTATCC 2 cut(s) 1001, 1151
BclI TGATCA 1 cut(s) 1240
BcnI CCSGG 2 cut(s) 274, 2301
BfaI CTAG 4 cut(s) 288, 1179, 1232, 1868
BfoI RGCGCY 1 cut(s) 1192
BfrI CTTAAG 2 cut(s) 998, 2411
BfuAI ACCTGC 6 cut(s) 379, 2515, 2647, 2713, 2845, 2977
BfuI GTATCC 2 cut(s) 1001, 1151
BglII AGATCT 1 cut(s) 2152
BisI GCNGC 9 cut(s) 201, 204, 633, 1833, 2132, 2269, 2428, 2473, 3029
BlpI GCTNAGC 1 cut(s) 2142
BlsI GCNGC 9 cut(s) 202, 205, 634, 1834, 2133, 2270, 2429, 2474, 3030
Bme18I GGWCC 5 cut(s) 12, 75, 315, 825, 1075
BmeRI GACNNNNNGTC 1 cut(s) 2557
BmgBI CACGTC 1 cut(s) 2083
BmgT120I GGNCC 6 cut(s) 12, 75, 315, 825, 1075, 1151
BmiI GGNNCC 3 cut(s) 14, 1892, 1904
BmsI GCATC 8 cut(s) 21, 550, 607, 950, 1638, 1844, 2121, 2242
BpiI GAAGAC 2 cut(s) 597, 1404
BpmI CTGGAG 3 cut(s) 368, 1356, 2257
Bpu10I CCTNAGC 1 cut(s) 873
Bpu1102I GCTNAGC 1 cut(s) 2142
Bpu14I TTCGAA 3 cut(s) 588, 906, 1842
BpuEI CTTGAG 9 cut(s) 21, 83, 827, 2504, 2551, 2683, 2749, 2881, 3013
BpuMI CCSGG 2 cut(s) 274, 2301
Bsa29I ATCGAT 1 cut(s) 2115
BsaAI YACGTR 1 cut(s) 1825
BsaBI GATNNNNATC 3 cut(s) 1107, 1239, 1698
BsaI GGTCTC 1 cut(s) 2370
BsaJI CCNNGG 6 cut(s) 1153, 1626, 1908, 1909, 1936, 2385
BsaWI WCCGGW 1 cut(s) 822
BsaXI ACNNNNNCTCC 6 cut(s) 2553, 2583, 2751, 2781, 2883, 2913
Bsc4I CCNNNNNNNGG 4 cut(s) 1000, 1034, 1072, 2361
Bse1I ACTGG 8 cut(s) 351, 1144, 1406, 1892, 2274, 2793, 2925, 2991
Bse3DI GCAATG 1 cut(s) 1381
Bse8I GATNNNNATC 3 cut(s) 1107, 1239, 1698
BseAI TCCGGA 1 cut(s) 822
BseBI CCWGG 8 cut(s) 1155, 1704, 1910, 1938, 2138, 2657, 2723, 2855
BseCI ATCGAT 1 cut(s) 2115
BseDI CCNNGG 6 cut(s) 1153, 1626, 1908, 1909, 1936, 2385
BseGI GGATG 4 cut(s) 460, 565, 1835, 2269
BseJI GATNNNNATC 3 cut(s) 1107, 1239, 1698
BseLI CCNNNNNNNGG 4 cut(s) 1000, 1034, 1072, 2361
BseMI GCAATG 1 cut(s) 1381
BseMII CTCAG 6 cut(s) 864, 914, 1850, 1947, 1964, 2133
BseNI ACTGG 8 cut(s) 351, 1144, 1406, 1892, 2274, 2793, 2925, 2991
BseRI GAGGAG 1 cut(s) 369
BseSI GKGCMC 2 cut(s) 468, 1929
BseXI GCAGC 9 cut(s) 187, 190, 644, 1819, 2143, 2255, 2439, 2459, 3015
BseYI CCCAGC 5 cut(s) 2510, 2642, 2708, 2840, 2972
BsgI GTGCAG 1 cut(s) 2105
Bsh1285I CGRYCG 1 cut(s) 161
BshFI GGCC 2 cut(s) 1022, 1152
BshNI GGYRCC 1 cut(s) 1902
BshVI ATCGAT 1 cut(s) 2115
BsiEI CGRYCG 1 cut(s) 161
BsiHKAI GWGCWC 5 cut(s) 468, 1929, 2571, 2769, 2901
BsiSI CCGG 3 cut(s) 274, 823, 2300
BslFI GGGAC 2 cut(s) 1945, 1994
BslI CCNNNNNNNGG 4 cut(s) 1000, 1034, 1072, 2361
BsmBI CGTCTC 2 cut(s) 896, 941
BsmFI GGGAC 2 cut(s) 1945, 1994
BsmI GAATGC 1 cut(s) 1834
BsnI GGCC 2 cut(s) 1022, 1152
Bso31I GGTCTC 1 cut(s) 2370
Bsp119I TTCGAA 3 cut(s) 588, 906, 1842
Bsp1286I GDGCHC 6 cut(s) 468, 1370, 1929, 2571, 2769, 2901
Bsp13I TCCGGA 1 cut(s) 822
Bsp1720I GCTNAGC 1 cut(s) 2142
BspACI CCGC 1 cut(s) 557
BspANI GGCC 2 cut(s) 1022, 1152
BspCNI CTCAG 6 cut(s) 865, 913, 1851, 1948, 1965, 2134
BspDI ATCGAT 1 cut(s) 2115
BspEI TCCGGA 1 cut(s) 822
BspHI TCATGA 2 cut(s) 1543, 1791
BspLI GGNNCC 3 cut(s) 14, 1892, 1904
BspMI ACCTGC 6 cut(s) 379, 2515, 2647, 2713, 2845, 2977
BspPI GGATC 4 cut(s) 316, 515, 1045, 1812
BspT104I TTCGAA 3 cut(s) 588, 906, 1842
BspT107I GGYRCC 1 cut(s) 1902
BspTI CTTAAG 2 cut(s) 998, 2411
BspTNI GGTCTC 1 cut(s) 2370
BsrDI GCAATG 1 cut(s) 1381
BsrI ACTGG 8 cut(s) 351, 1144, 1406, 1892, 2274, 2793, 2925, 2991
BssECI CCNNGG 6 cut(s) 1153, 1626, 1908, 1909, 1936, 2385
BssT1I CCWWGG 1 cut(s) 2385
Bst2UI CCWGG 8 cut(s) 1155, 1704, 1910, 1938, 2138, 2657, 2723, 2855
Bst4CI ACNGT 7 cut(s) 101, 159, 492, 515, 829, 1360, 2592
Bst6I CTCTTC 3 cut(s) 901, 1839, 3022
BstAFI CTTAAG 2 cut(s) 998, 2411
BstBAI YACGTR 1 cut(s) 1825
BstBI TTCGAA 3 cut(s) 588, 906, 1842
BstC8I GCNNGC 2 cut(s) 145, 606
BstDSI CCRYGG 1 cut(s) 1626
BstEII GGTNACC 1 cut(s) 179
BstENI CCTNNNNNAGG 1 cut(s) 998
BstF5I GGATG 4 cut(s) 460, 565, 1835, 2269
BstH2I RGCGCY 1 cut(s) 1192
BstHHI GCGC 4 cut(s) 116, 1191, 2049, 2529
BstMCI CGRYCG 1 cut(s) 161
BstNI CCWGG 8 cut(s) 1155, 1704, 1910, 1938, 2138, 2657, 2723, 2855
BstNSI RCATGY 3 cut(s) 86, 147, 1019
BstPI GGTNACC 1 cut(s) 179
BstSLI GKGCMC 2 cut(s) 468, 1929
BstV1I GCAGC 9 cut(s) 187, 190, 644, 1819, 2143, 2255, 2439, 2459, 3015
BstV2I GAAGAC 2 cut(s) 597, 1404
BstX2I RGATCY 4 cut(s) 321, 520, 1804, 2152
BstYI RGATCY 4 cut(s) 321, 520, 1804, 2152
Bsu15I ATCGAT 1 cut(s) 2115
BsuI GTATCC 2 cut(s) 1001, 1151
BsuRI GGCC 2 cut(s) 1022, 1152
BsuTUI ATCGAT 1 cut(s) 2115
BtgI CCRYGG 1 cut(s) 1626
BtgZI GCGATG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 2083
BtsCI GGATG 4 cut(s) 460, 565, 1835, 2269
BtsIMutI CAGTG 4 cut(s) 397, 1605, 1885, 2918
BveI ACCTGC 6 cut(s) 379, 2515, 2647, 2713, 2845, 2977
Cac8I GCNNGC 2 cut(s) 145, 606
CaiI CAGNNNCTG 1 cut(s) 2137
CciI TCATGA 2 cut(s) 1543, 1791
CfoI GCGC 4 cut(s) 116, 1191, 2049, 2529
Cfr13I GGNCC 6 cut(s) 12, 75, 315, 825, 1075, 1151
ClaI ATCGAT 1 cut(s) 2115
CpoI CGGWCCG 1 cut(s) 825
CseI GACGC 1 cut(s) 2115
Csp6I GTAC 6 cut(s) 279, 533, 1068, 1748, 1767, 2650
CspCI CAANNNNNGTGG 2 cut(s) 1302, 1337
CspI CGGWCCG 1 cut(s) 825
CviQI GTAC 6 cut(s) 279, 533, 1068, 1748, 1767, 2650
DriI GACNNNNNGTC 1 cut(s) 2557
EaeI YGGCCR 1 cut(s) 1020
Eam1104I CTCTTC 3 cut(s) 901, 1839, 3022
Eam1105I GACNNNNNGTC 1 cut(s) 2557
EarI CTCTTC 3 cut(s) 901, 1839, 3022
Ecl136II GAGCTC 3 cut(s) 2569, 2767, 2899
Eco130I CCWWGG 1 cut(s) 2385
Eco24I GRGCYC 4 cut(s) 1370, 2571, 2769, 2901
Eco31I GGTCTC 1 cut(s) 2370
Eco47I GGWCC 5 cut(s) 12, 75, 315, 825, 1075
Eco47III AGCGCT 1 cut(s) 1190
Eco53kI GAGCTC 3 cut(s) 2569, 2767, 2899
Eco57I CTGAAG 1 cut(s) 2004
Eco72I CACGTG 1 cut(s) 1825
Eco91I GGTNACC 1 cut(s) 179
EcoICRI GAGCTC 3 cut(s) 2569, 2767, 2899
EcoNI CCTNNNNNAGG 1 cut(s) 998
EcoO109I RGGNCCY 2 cut(s) 12, 1075
EcoO65I GGTNACC 1 cut(s) 179
EcoRI GAATTC 1 cut(s) 476
EcoRII CCWGG 8 cut(s) 1153, 1702, 1908, 1936, 2136, 2655, 2721, 2853
EcoT14I CCWWGG 1 cut(s) 2385
EcoT22I ATGCAT 3 cut(s) 88, 565, 1653
EcoT38I GRGCYC 4 cut(s) 1370, 2571, 2769, 2901
ErhI CCWWGG 1 cut(s) 2385
Esp3I CGTCTC 2 cut(s) 896, 941
FalI AAGNNNNNCTT 4 cut(s) 1914, 1946, 2416, 2448
FaqI GGGAC 2 cut(s) 1945, 1994
FauNDI CATATG 2 cut(s) 138, 529
FbaI TGATCA 1 cut(s) 1240
FblI GTMKAC 1 cut(s) 863
Fnu4HI GCNGC 9 cut(s) 201, 204, 633, 1833, 2132, 2269, 2428, 2473, 3029
FokI GGATG 4 cut(s) 467, 572, 1822, 2276
FriOI GRGCYC 4 cut(s) 1370, 2571, 2769, 2901
Fsp4HI GCNGC 9 cut(s) 201, 204, 633, 1833, 2132, 2269, 2428, 2473, 3029
FspBI CTAG 4 cut(s) 288, 1179, 1232, 1868
FspI TGCGCA 1 cut(s) 2048
GlaI GCGC 4 cut(s) 115, 1190, 2048, 2528
GluI GCNGC 9 cut(s) 201, 204, 633, 1833, 2132, 2269, 2428, 2473, 3029
GsaI CCCAGC 5 cut(s) 2514, 2646, 2712, 2844, 2976
GsuI CTGGAG 3 cut(s) 368, 1356, 2257
HaeII RGCGCY 1 cut(s) 1192
HaeIII GGCC 2 cut(s) 1022, 1152
HapII CCGG 3 cut(s) 274, 823, 2300
HgaI GACGC 1 cut(s) 2115
HhaI GCGC 4 cut(s) 116, 1191, 2049, 2529
Hin6I GCGC 4 cut(s) 114, 1189, 2047, 2527
HinP1I GCGC 4 cut(s) 114, 1189, 2047, 2527
HindIII AAGCTT 5 cut(s) 303, 401, 689, 2243, 2375
HpaII CCGG 3 cut(s) 274, 823, 2300
HphI GGTGA 3 cut(s) 191, 1145, 3012
Hpy166II GTNNAC 6 cut(s) 75, 466, 864, 1748, 1927, 2331
Hpy8I GTNNAC 6 cut(s) 75, 466, 864, 1748, 1927, 2331
Hpy99I CGWCG 1 cut(s) 2131
HpyCH4III ACNGT 7 cut(s) 101, 159, 492, 515, 829, 1360, 2592
HpyCH4IV ACGT 5 cut(s) 583, 777, 1043, 1824, 2082
HpySE526I ACGT 5 cut(s) 583, 777, 1043, 1824, 2082
HspAI GCGC 4 cut(s) 114, 1189, 2047, 2527
Kpn2I TCCGGA 1 cut(s) 822
Ksp22I TGATCA 1 cut(s) 1240
LmnI GCTCC 7 cut(s) 1228, 2100, 2276, 2454, 2574, 2772, 2904
Lsp1109I GCAGC 9 cut(s) 187, 190, 644, 1819, 2143, 2255, 2439, 2459, 3015
LweI GCATC 8 cut(s) 21, 550, 607, 950, 1638, 1844, 2121, 2242
MaeI CTAG 4 cut(s) 288, 1179, 1232, 1868
MaeII ACGT 5 cut(s) 583, 777, 1043, 1824, 2082
MaeIII GTNAC 6 cut(s) 95, 129, 179, 1171, 1520, 2559
MflI RGATCY 4 cut(s) 321, 520, 1804, 2152
MhlI GDGCHC 6 cut(s) 468, 1370, 1929, 2571, 2769, 2901
MlsI TGGCCA 1 cut(s) 1022
MluNI TGGCCA 1 cut(s) 1022
MmeI TCCRAC 4 cut(s) 293, 742, 1108, 1655
Mox20I TGGCCA 1 cut(s) 1022
Mph1103I ATGCAT 3 cut(s) 88, 565, 1653
MroI TCCGGA 1 cut(s) 822
MroXI GAANNNNTTC 1 cut(s) 584
MscI TGGCCA 1 cut(s) 1022
MslI CAYNNNNRTG 6 cut(s) 297, 1610, 1625, 1790, 1796, 1827
Msp20I TGGCCA 1 cut(s) 1022
MspCI CTTAAG 2 cut(s) 998, 2411
MspI CCGG 3 cut(s) 274, 823, 2300
Mva1269I GAATGC 1 cut(s) 1834
MvaI CCWGG 8 cut(s) 1155, 1704, 1910, 1938, 2138, 2657, 2723, 2855
NciI CCSGG 2 cut(s) 274, 2301
NdeI CATATG 2 cut(s) 138, 529
NlaIV GGNNCC 3 cut(s) 14, 1892, 1904
NmuCI GTSAC 4 cut(s) 129, 179, 1171, 2559
NsbI TGCGCA 1 cut(s) 2048
NsiI ATGCAT 3 cut(s) 88, 565, 1653
NspI RCATGY 3 cut(s) 86, 147, 1019
NspV TTCGAA 3 cut(s) 588, 906, 1842
PaeI GCATGC 1 cut(s) 147
PagI TCATGA 2 cut(s) 1543, 1791
PaqCI CACCTGC 1 cut(s) 379
PasI CCCWGGG 1 cut(s) 1909
PciI ACATGT 1 cut(s) 1015
PcsI WCGNNNNNNNCGW 1 cut(s) 774
PctI GAATGC 1 cut(s) 1834
PdmI GAANNNNTTC 1 cut(s) 584
PflMI CCANNNNNTGG 1 cut(s) 1034
PfoI TCCNGGA 1 cut(s) 1702
PkrI GCNGC 9 cut(s) 202, 205, 634, 1834, 2133, 2270, 2429, 2474, 3030
PmaCI CACGTG 1 cut(s) 1825
PmlI CACGTG 1 cut(s) 1825
Ppu21I YACGTR 1 cut(s) 1825
PpuMI RGGWCCY 2 cut(s) 12, 1075
PscI ACATGT 1 cut(s) 1015
PshBI ATTAAT 1 cut(s) 2184
Psp124BI GAGCTC 3 cut(s) 2571, 2769, 2901
Psp1406I AACGTT 2 cut(s) 583, 1043
Psp5II RGGWCCY 2 cut(s) 12, 1075
Psp6I CCWGG 8 cut(s) 1153, 1702, 1908, 1936, 2136, 2655, 2721, 2853
PspCI CACGTG 1 cut(s) 1825
PspEI GGTNACC 1 cut(s) 179
PspFI CCCAGC 5 cut(s) 2510, 2642, 2708, 2840, 2972
PspGI CCWGG 8 cut(s) 1153, 1702, 1908, 1936, 2136, 2655, 2721, 2853
PspN4I GGNNCC 3 cut(s) 14, 1892, 1904
PspPI GGNCC 6 cut(s) 12, 75, 315, 825, 1075, 1151
PspPPI RGGWCCY 2 cut(s) 12, 1075
PspXI VCTCGAGB 8 cut(s) 2498, 2564, 2630, 2696, 2762, 2828, 2894, 2960
PstNI CAGNNNCTG 1 cut(s) 2137
PsuI RGATCY 4 cut(s) 321, 520, 1804, 2152
RsaI GTAC 6 cut(s) 280, 534, 1069, 1749, 1768, 2651
RsaNI GTAC 6 cut(s) 279, 533, 1068, 1748, 1767, 2650
RseI CAYNNNNRTG 6 cut(s) 297, 1610, 1625, 1790, 1796, 1827
Rsr2I CGGWCCG 1 cut(s) 825
RsrII CGGWCCG 1 cut(s) 825
SacI GAGCTC 3 cut(s) 2571, 2769, 2901
SatI GCNGC 9 cut(s) 201, 204, 633, 1833, 2132, 2269, 2428, 2473, 3029
Sau96I GGNCC 6 cut(s) 12, 75, 315, 825, 1075, 1151
SduI GDGCHC 6 cut(s) 468, 1370, 1929, 2571, 2769, 2901
SfaNI GCATC 8 cut(s) 21, 550, 607, 950, 1638, 1844, 2121, 2242
SfuI TTCGAA 3 cut(s) 588, 906, 1842
SinI GGWCC 5 cut(s) 12, 75, 315, 825, 1075
SmiMI CAYNNNNRTG 6 cut(s) 297, 1610, 1625, 1790, 1796, 1827
SphI GCATGC 1 cut(s) 147
SsiI CCGC 1 cut(s) 557
SspI AATATT 1 cut(s) 1433
SspMI CTAG 4 cut(s) 288, 1179, 1232, 1868
SstI GAGCTC 3 cut(s) 2571, 2769, 2901
StyI CCWWGG 1 cut(s) 2385
TaaI ACNGT 7 cut(s) 101, 159, 492, 515, 829, 1360, 2592
TaiI ACGT 5 cut(s) 586, 780, 1046, 1827, 2085
TatI WGTACW 2 cut(s) 1747, 2649
TscAI CASTG 4 cut(s) 397, 1612, 1892, 2925
TseFI GTSAC 4 cut(s) 129, 179, 1171, 2559
TseI GCWGC 9 cut(s) 200, 203, 632, 1832, 2131, 2268, 2427, 2472, 3028
Tsp45I GTSAC 4 cut(s) 129, 179, 1171, 2559
TspGWI ACGGA 3 cut(s) 1310, 1615, 1726
TspRI CASTG 4 cut(s) 397, 1612, 1892, 2925
Van91I CCANNNNNTGG 1 cut(s) 1034
Vha464I CTTAAG 2 cut(s) 998, 2411
VneI GTGCAC 2 cut(s) 464, 1925
VpaK11BI GGWCC 5 cut(s) 12, 75, 315, 825, 1075
VspI ATTAAT 1 cut(s) 2184
XagI CCTNNNNNAGG 1 cut(s) 998
XapI RAATTY 4 cut(s) 476, 1118, 1737, 2283
XceI RCATGY 3 cut(s) 86, 147, 1019
XcmI CCANNNNNNNNNTGG 1 cut(s) 1151
XmiI GTMKAC 1 cut(s) 863
XmnI GAANNNNTTC 1 cut(s) 584
XspI CTAG 4 cut(s) 288, 1179, 1232, 1868
Zsp2I ATGCAT 3 cut(s) 88, 565, 1653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.