RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 20 - 197 | 5e-51 | TIR domain |
| TIR_2 | PF13676 | 23 - 119 | 6.5e-13 | TIR domain |
| NB-ARC | PF00931 | 221 - 374 | 4.8e-18 | NB-ARC domain |
| NACHT | PF05729 | 223 - 368 | 6.1e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 440 - 508 | 4e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| C-JID | PF20160 | 957 - 1107 | 1.3e-10 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1001, 1890, 3098 |
| Acc16I | TGCGCA | 1 cut(s) | 2432 |
| Acc36I | ACCTGC | 2 cut(s) | 202, 2410 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AccBSI | CCGCTC | 1 cut(s) | 99 |
| AccII | CGCG | 1 cut(s) | 1423 |
| AciI | CCGC | 6 cut(s) | 97, 1418, 1423, 2979, 3113, 3180 |
| AclWI | GGATC | 6 cut(s) | 344, 959, 2323, 2707, 3298, 3311 |
| AcoI | YGGCCR | 1 cut(s) | 1975 |
| AcsI | RAATTY | 7 cut(s) | 104, 1565, 1703, 2133, 2496, 2934, 3071 |
| AcuI | CTGAAG | 5 cut(s) | 618, 729, 1657, 2052, 2546 |
| AcyI | GRCGYC | 1 cut(s) | 3218 |
| AfaI | GTAC | 8 cut(s) | 62, 679, 901, 1530, 1658, 1664, 1805, 3242 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 154, 904, 2735, 3001 |
| AflII | CTTAAG | 1 cut(s) | 170 |
| AflIII | ACRYGT | 3 cut(s) | 1659, 3147, 3171 |
| AjnI | CCWGG | 3 cut(s) | 982, 2783, 2887 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 717, 749, 1763, 1795 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 398, 430 |
| Alw21I | GWGCWC | 4 cut(s) | 2168, 2481, 2572, 2728 |
| Alw26I | GTCTC | 7 cut(s) | 1288, 1455, 1841, 1848, 2052, 2345, 2737 |
| Alw44I | GTGCAC | 1 cut(s) | 2164 |
| AlwI | GGATC | 6 cut(s) | 344, 959, 2323, 2707, 3298, 3311 |
| Ama87I | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| AoxI | GGCC | 4 cut(s) | 979, 1405, 1510, 1975 |
| ApaLI | GTGCAC | 1 cut(s) | 2164 |
| ApeKI | GCWGC | 6 cut(s) | 26, 29, 125, 2428, 2488, 2638 |
| ApoI | RAATTY | 7 cut(s) | 104, 1565, 1703, 2133, 2496, 2934, 3071 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1086 |
| AspLEI | GCGC | 2 cut(s) | 1423, 2433 |
| AspS9I | GGNCC | 5 cut(s) | 191, 907, 980, 1510, 1592 |
| AsuC2I | CCSGG | 1 cut(s) | 2874 |
| AsuHPI | GGTGA | 4 cut(s) | 974, 1072, 1082, 2132 |
| AvaI | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| AvaII | GGWCC | 3 cut(s) | 191, 907, 1592 |
| BaeGI | GKGCMC | 2 cut(s) | 2168, 2680 |
| BalI | TGGCCA | 1 cut(s) | 1977 |
| BamHI | GGATCC | 1 cut(s) | 3303 |
| BanII | GRGCYC | 2 cut(s) | 2481, 2572 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1655, 1687 |
| BbsI | GAAGAC | 1 cut(s) | 2534 |
| Bbv12I | GWGCWC | 4 cut(s) | 2168, 2481, 2572, 2728 |
| BbvCI | CCTCAGC | 1 cut(s) | 1859 |
| BbvI | GCAGC | 6 cut(s) | 13, 16, 112, 2415, 2475, 2625 |
| BceAI | ACGGC | 1 cut(s) | 2966 |
| BciT130I | CCWGG | 3 cut(s) | 984, 2785, 2889 |
| BciVI | GTATCC | 2 cut(s) | 1874, 3194 |
| BclI | TGATCA | 3 cut(s) | 1045, 2692, 3259 |
| BcnI | CCSGG | 1 cut(s) | 2874 |
| BcoDI | GTCTC | 7 cut(s) | 1288, 1455, 1841, 1848, 2052, 2345, 2737 |
| BfaI | CTAG | 4 cut(s) | 561, 1008, 1986, 3117 |
| BfmI | CTRYAG | 1 cut(s) | 864 |
| BfrI | CTTAAG | 1 cut(s) | 170 |
| BfuAI | ACCTGC | 2 cut(s) | 202, 2410 |
| BfuI | GTATCC | 2 cut(s) | 1874, 3194 |
| BglII | AGATCT | 2 cut(s) | 2041, 2074 |
| BisI | GCNGC | 7 cut(s) | 27, 30, 126, 1419, 2429, 2489, 2639 |
| BlsI | GCNGC | 7 cut(s) | 28, 31, 127, 1420, 2430, 2490, 2640 |
| BmcAI | AGTACT | 1 cut(s) | 3242 |
| Bme1390I | CCNGG | 4 cut(s) | 984, 2785, 2874, 2889 |
| Bme18I | GGWCC | 3 cut(s) | 191, 907, 1592 |
| BmeT110I | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| BmgT120I | GGNCC | 5 cut(s) | 191, 907, 980, 1510, 1592 |
| BmiI | GGNNCC | 2 cut(s) | 1210, 3305 |
| BmrFI | CCNGG | 4 cut(s) | 984, 2785, 2874, 2889 |
| BmrI | ACTGGG | 1 cut(s) | 1882 |
| BmsI | GCATC | 8 cut(s) | 298, 930, 1191, 1405, 2418, 2678, 2794, 2999 |
| BmuI | ACTGGG | 1 cut(s) | 1882 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2033 |
| BpiI | GAAGAC | 1 cut(s) | 2534 |
| BpmI | CTGGAG | 2 cut(s) | 2556, 2767 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1686, 1859 |
| BpuEI | CTTGAG | 2 cut(s) | 1161, 1509 |
| BpuMI | CCSGG | 1 cut(s) | 2874 |
| Bsa29I | ATCGAT | 1 cut(s) | 1443 |
| BsaAI | YACGTR | 1 cut(s) | 1662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2580, 3308 |
| BsaHI | GRCGYC | 1 cut(s) | 3218 |
| BsaI | GGTCTC | 2 cut(s) | 1841, 2345 |
| BsaJI | CCNNGG | 6 cut(s) | 153, 982, 1541, 1637, 2532, 2729 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2463, 2493 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 154, 904, 2735, 3001 |
| Bse1I | ACTGG | 3 cut(s) | 968, 1513, 1877 |
| Bse3DI | GCAATG | 1 cut(s) | 1518 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2580, 3308 |
| BseBI | CCWGG | 3 cut(s) | 984, 2785, 2889 |
| BseCI | ATCGAT | 1 cut(s) | 1443 |
| BseDI | CCNNGG | 6 cut(s) | 153, 982, 1541, 1637, 2532, 2729 |
| BseJI | GATNNNNATC | 2 cut(s) | 2580, 3308 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 154, 904, 2735, 3001 |
| BseMI | GCAATG | 1 cut(s) | 1518 |
| BseMII | CTCAG | 5 cut(s) | 1283, 1873, 2297, 2954, 3204 |
| BseNI | ACTGG | 3 cut(s) | 968, 1513, 1877 |
| BseRI | GAGGAG | 2 cut(s) | 2824, 2924 |
| BseSI | GKGCMC | 2 cut(s) | 2168, 2680 |
| BseXI | GCAGC | 6 cut(s) | 13, 16, 112, 2415, 2475, 2625 |
| Bsh1236I | CGCG | 1 cut(s) | 1423 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1697 |
| BshFI | GGCC | 4 cut(s) | 981, 1407, 1512, 1977 |
| BshVI | ATCGAT | 1 cut(s) | 1443 |
| BsiEI | CGRYCG | 1 cut(s) | 1697 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2168, 2481, 2572, 2728 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| BsiSI | CCGG | 2 cut(s) | 610, 2873 |
| BsiWI | CGTACG | 1 cut(s) | 1662 |
| BslFI | GGGAC | 3 cut(s) | 2021, 2168, 3023 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 154, 904, 2735, 3001 |
| BsmAI | GTCTC | 7 cut(s) | 1288, 1455, 1841, 1848, 2052, 2345, 2737 |
| BsmBI | CGTCTC | 1 cut(s) | 1455 |
| BsmFI | GGGAC | 3 cut(s) | 2021, 2168, 3023 |
| BsnI | GGCC | 4 cut(s) | 981, 1407, 1512, 1977 |
| Bso31I | GGTCTC | 2 cut(s) | 1841, 2345 |
| BsoBI | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| Bsp1286I | GDGCHC | 5 cut(s) | 2168, 2481, 2572, 2680, 2728 |
| Bsp19I | CCATGG | 1 cut(s) | 153 |
| BspACI | CCGC | 6 cut(s) | 97, 1418, 1423, 2979, 3113, 3180 |
| BspANI | GGCC | 4 cut(s) | 981, 1407, 1512, 1977 |
| BspCNI | CTCAG | 5 cut(s) | 1284, 1872, 2298, 2953, 3205 |
| BspDI | ATCGAT | 1 cut(s) | 1443 |
| BspFNI | CGCG | 1 cut(s) | 1423 |
| BspLI | GGNNCC | 2 cut(s) | 1210, 3305 |
| BspMI | ACCTGC | 2 cut(s) | 202, 2410 |
| BspPI | GGATC | 6 cut(s) | 344, 959, 2323, 2707, 3298, 3311 |
| BspTI | CTTAAG | 1 cut(s) | 170 |
| BspTNI | GGTCTC | 2 cut(s) | 1841, 2345 |
| BsrBI | CCGCTC | 1 cut(s) | 99 |
| BsrDI | GCAATG | 1 cut(s) | 1518 |
| BsrI | ACTGG | 3 cut(s) | 968, 1513, 1877 |
| BssECI | CCNNGG | 6 cut(s) | 153, 982, 1541, 1637, 2532, 2729 |
| BssNI | GRCGYC | 1 cut(s) | 3218 |
| BssT1I | CCWWGG | 4 cut(s) | 153, 1541, 1637, 2729 |
| Bst2UI | CCWGG | 3 cut(s) | 984, 2785, 2889 |
| Bst4CI | ACNGT | 9 cut(s) | 414, 1603, 1647, 1695, 2054, 2120, 2442, 2533, 2857 |
| Bst6I | CTCTTC | 3 cut(s) | 1100, 1676, 1851 |
| BstACI | GRCGYC | 1 cut(s) | 3218 |
| BstAFI | CTTAAG | 1 cut(s) | 170 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2675 |
| BstBAI | YACGTR | 1 cut(s) | 1662 |
| BstC8I | GCNNGC | 2 cut(s) | 469, 2407 |
| BstDSI | CCRYGG | 2 cut(s) | 153, 2532 |
| BstEII | GGTNACC | 1 cut(s) | 2120 |
| BstFNI | CGCG | 1 cut(s) | 1423 |
| BstHHI | GCGC | 2 cut(s) | 1423, 2433 |
| BstMAI | GTCTC | 7 cut(s) | 1288, 1455, 1841, 1848, 2052, 2345, 2737 |
| BstMCI | CGRYCG | 1 cut(s) | 1697 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 35, 223, 1696, 1936, 2485, 2666, 2675, 2978, 2987 |
| BstNI | CCWGG | 3 cut(s) | 984, 2785, 2889 |
| BstNSI | RCATGY | 3 cut(s) | 1353, 2660, 3175 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2033 |
| BstPI | GGTNACC | 1 cut(s) | 2120 |
| BstSCI | CCNGG | 4 cut(s) | 982, 2783, 2872, 2887 |
| BstSFI | CTRYAG | 1 cut(s) | 864 |
| BstSLI | GKGCMC | 2 cut(s) | 2168, 2680 |
| BstUI | CGCG | 1 cut(s) | 1423 |
| BstV1I | GCAGC | 6 cut(s) | 13, 16, 112, 2415, 2475, 2625 |
| BstV2I | GAAGAC | 1 cut(s) | 2534 |
| BstX2I | RGATCY | 5 cut(s) | 349, 2041, 2074, 2328, 3303 |
| BstYI | RGATCY | 5 cut(s) | 349, 2041, 2074, 2328, 3303 |
| Bsu15I | ATCGAT | 1 cut(s) | 1443 |
| BsuI | GTATCC | 2 cut(s) | 1874, 3194 |
| BsuRI | GGCC | 4 cut(s) | 981, 1407, 1512, 1977 |
| BsuTUI | ATCGAT | 1 cut(s) | 1443 |
| BtgI | CCRYGG | 2 cut(s) | 153, 2532 |
| BtsIMutI | CAGTG | 4 cut(s) | 669, 2274, 2522, 3210 |
| BveI | ACCTGC | 2 cut(s) | 202, 2410 |
| Cac8I | GCNNGC | 2 cut(s) | 469, 2407 |
| CfoI | GCGC | 2 cut(s) | 1423, 2433 |
| Cfr13I | GGNCC | 5 cut(s) | 191, 907, 980, 1510, 1592 |
| ClaI | ATCGAT | 1 cut(s) | 1443 |
| CseI | GACGC | 3 cut(s) | 1388, 1568, 3207 |
| Csp6I | GTAC | 8 cut(s) | 61, 678, 900, 1529, 1657, 1663, 1804, 3241 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3280, 3315 |
| CviQI | GTAC | 8 cut(s) | 61, 678, 900, 1529, 1657, 1663, 1804, 3241 |
| DraI | TTTAAA | 1 cut(s) | 1114 |
| EaeI | YGGCCR | 1 cut(s) | 1975 |
| Eam1104I | CTCTTC | 3 cut(s) | 1100, 1676, 1851 |
| EarI | CTCTTC | 3 cut(s) | 1100, 1676, 1851 |
| EciI | GGCGGA | 2 cut(s) | 2968, 3102 |
| Ecl136II | GAGCTC | 2 cut(s) | 2479, 2570 |
| Eco130I | CCWWGG | 4 cut(s) | 153, 1541, 1637, 2729 |
| Eco24I | GRGCYC | 2 cut(s) | 2481, 2572 |
| Eco31I | GGTCTC | 2 cut(s) | 1841, 2345 |
| Eco32I | GATATC | 1 cut(s) | 2191 |
| Eco47I | GGWCC | 3 cut(s) | 191, 907, 1592 |
| Eco53kI | GAGCTC | 2 cut(s) | 2479, 2570 |
| Eco57I | CTGAAG | 5 cut(s) | 618, 729, 1657, 2052, 2546 |
| Eco88I | CYCGRG | 3 cut(s) | 1838, 2474, 2586 |
| Eco91I | GGTNACC | 1 cut(s) | 2120 |
| EcoICRI | GAGCTC | 2 cut(s) | 2479, 2570 |
| EcoO109I | RGGNCCY | 2 cut(s) | 907, 1592 |
| EcoO65I | GGTNACC | 1 cut(s) | 2120 |
| EcoRI | GAATTC | 1 cut(s) | 3071 |
| EcoRII | CCWGG | 3 cut(s) | 982, 2783, 2887 |
| EcoRV | GATATC | 1 cut(s) | 2191 |
| EcoT14I | CCWWGG | 4 cut(s) | 153, 1541, 1637, 2729 |
| EcoT22I | ATGCAT | 3 cut(s) | 291, 313, 1404 |
| EcoT38I | GRGCYC | 2 cut(s) | 2481, 2572 |
| ErhI | CCWWGG | 4 cut(s) | 153, 1541, 1637, 2729 |
| Esp3I | CGTCTC | 1 cut(s) | 1455 |
| FaqI | GGGAC | 3 cut(s) | 2021, 2168, 3023 |
| FauI | CCCGC | 2 cut(s) | 104, 1416 |
| FauNDI | CATATG | 4 cut(s) | 1054, 1680, 1726, 1935 |
| FbaI | TGATCA | 3 cut(s) | 1045, 2692, 3259 |
| Fnu4HI | GCNGC | 7 cut(s) | 27, 30, 126, 1419, 2429, 2489, 2639 |
| FriOI | GRGCYC | 2 cut(s) | 2481, 2572 |
| Fsp4HI | GCNGC | 7 cut(s) | 27, 30, 126, 1419, 2429, 2489, 2639 |
| FspBI | CTAG | 4 cut(s) | 561, 1008, 1986, 3117 |
| FspI | TGCGCA | 1 cut(s) | 2432 |
| GlaI | GCGC | 2 cut(s) | 1422, 2432 |
| GluI | GCNGC | 7 cut(s) | 27, 30, 126, 1419, 2429, 2489, 2639 |
| GsuI | CTGGAG | 2 cut(s) | 2556, 2767 |
| HaeIII | GGCC | 4 cut(s) | 981, 1407, 1512, 1977 |
| HapII | CCGG | 2 cut(s) | 610, 2873 |
| HgaI | GACGC | 3 cut(s) | 1388, 1568, 3207 |
| HhaI | GCGC | 2 cut(s) | 1423, 2433 |
| Hin1I | GRCGYC | 1 cut(s) | 3218 |
| Hin6I | GCGC | 2 cut(s) | 1421, 2431 |
| HinP1I | GCGC | 2 cut(s) | 1421, 2431 |
| HindIII | AAGCTT | 4 cut(s) | 224, 453, 744, 2459 |
| HpaII | CCGG | 2 cut(s) | 610, 2873 |
| HphI | GGTGA | 4 cut(s) | 974, 1072, 1082, 2132 |
| Hpy166II | GTNNAC | 3 cut(s) | 1659, 2166, 2604 |
| Hpy188I | TCNGA | 8 cut(s) | 571, 854, 1100, 1269, 1832, 2241, 2622, 2943 |
| Hpy8I | GTNNAC | 3 cut(s) | 1659, 2166, 2604 |
| Hpy99I | CGWCG | 4 cut(s) | 1584, 2488, 3056, 3223 |
| HpyAV | CCTTC | 6 cut(s) | 593, 1021, 1605, 1765, 1792, 3280 |
| HpyCH4III | ACNGT | 9 cut(s) | 414, 1603, 1647, 1695, 2054, 2120, 2442, 2533, 2857 |
| HpyCH4IV | ACGT | 5 cut(s) | 1448, 1661, 1785, 2842, 3147 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 35, 223, 1696, 1936, 2485, 2666, 2675, 2978, 2987 |
| HpySE526I | ACGT | 5 cut(s) | 1448, 1661, 1785, 2842, 3147 |
| Hsp92I | GRCGYC | 1 cut(s) | 3218 |
| HspAI | GCGC | 2 cut(s) | 1421, 2431 |
| Ksp22I | TGATCA | 3 cut(s) | 1045, 2692, 3259 |
| LmnI | GCTCC | 5 cut(s) | 2484, 2567, 2575, 2731, 2786 |
| Lsp1109I | GCAGC | 6 cut(s) | 13, 16, 112, 2415, 2475, 2625 |
| LweI | GCATC | 8 cut(s) | 298, 930, 1191, 1405, 2418, 2678, 2794, 2999 |
| MaeI | CTAG | 4 cut(s) | 561, 1008, 1986, 3117 |
| MaeII | ACGT | 5 cut(s) | 1448, 1661, 1785, 2842, 3147 |
| MaeIII | GTNAC | 9 cut(s) | 165, 821, 1220, 1376, 1392, 2099, 2114, 2120, 3032 |
| MbiI | CCGCTC | 1 cut(s) | 99 |
| MfeI | CAATTG | 1 cut(s) | 1104 |
| MflI | RGATCY | 5 cut(s) | 349, 2041, 2074, 2328, 3303 |
| MhlI | GDGCHC | 5 cut(s) | 2168, 2481, 2572, 2680, 2728 |
| MlsI | TGGCCA | 1 cut(s) | 1977 |
| MluNI | TGGCCA | 1 cut(s) | 1977 |
| MlyI | GAGTC | 4 cut(s) | 554, 1850, 1975, 2632 |
| MmeI | TCCRAC | 4 cut(s) | 571, 2219, 2740, 2751 |
| Mox20I | TGGCCA | 1 cut(s) | 1977 |
| Mph1103I | ATGCAT | 3 cut(s) | 291, 313, 1404 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1086 |
| MscI | TGGCCA | 1 cut(s) | 1977 |
| MseI | TTAA | 9 cut(s) | 171, 830, 947, 1113, 1313, 1953, 2391, 2424, 2444 |
| MslI | CAYNNNNRTG | 2 cut(s) | 120, 1053 |
| Msp20I | TGGCCA | 1 cut(s) | 1977 |
| MspA1I | CMGCKG | 1 cut(s) | 1233 |
| MspCI | CTTAAG | 1 cut(s) | 170 |
| MspI | CCGG | 2 cut(s) | 610, 2873 |
| MspR9I | CCNGG | 4 cut(s) | 984, 2785, 2874, 2889 |
| MunI | CAATTG | 1 cut(s) | 1104 |
| MvaI | CCWGG | 3 cut(s) | 984, 2785, 2889 |
| MvnI | CGCG | 1 cut(s) | 1423 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 35, 223, 1696, 1936, 2485, 2666, 2675, 2978, 2987 |
| NciI | CCSGG | 1 cut(s) | 2874 |
| NcoI | CCATGG | 1 cut(s) | 153 |
| NdeI | CATATG | 4 cut(s) | 1054, 1680, 1726, 1935 |
| NlaIV | GGNNCC | 2 cut(s) | 1210, 3305 |
| NmuCI | GTSAC | 7 cut(s) | 165, 821, 1220, 1376, 2114, 2120, 3032 |
| NsbI | TGCGCA | 1 cut(s) | 2432 |
| NsiI | ATGCAT | 3 cut(s) | 291, 313, 1404 |
| NspI | RCATGY | 3 cut(s) | 1353, 2660, 3175 |
| PaeR7I | CTCGAG | 2 cut(s) | 1838, 2586 |
| PciI | ACATGT | 1 cut(s) | 3171 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1836 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1086 |
| Pfl23II | CGTACG | 1 cut(s) | 1662 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| PfoI | TCCNGGA | 3 cut(s) | 2783, 2872, 2887 |
| PkrI | GCNGC | 7 cut(s) | 28, 31, 127, 1420, 2430, 2490, 2640 |
| PleI | GAGTC | 4 cut(s) | 553, 1849, 1975, 2631 |
| PpsI | GAGTC | 4 cut(s) | 553, 1849, 1975, 2631 |
| Ppu21I | YACGTR | 1 cut(s) | 1662 |
| PpuMI | RGGWCCY | 2 cut(s) | 907, 1592 |
| PscI | ACATGT | 1 cut(s) | 3171 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2033 |
| PsiI | TTATAA | 3 cut(s) | 1001, 1890, 3098 |
| Psp124BI | GAGCTC | 2 cut(s) | 2481, 2572 |
| Psp5II | RGGWCCY | 2 cut(s) | 907, 1592 |
| Psp6I | CCWGG | 3 cut(s) | 982, 2783, 2887 |
| PspEI | GGTNACC | 1 cut(s) | 2120 |
| PspGI | CCWGG | 3 cut(s) | 982, 2783, 2887 |
| PspLI | CGTACG | 1 cut(s) | 1662 |
| PspN4I | GGNNCC | 2 cut(s) | 1210, 3305 |
| PspPI | GGNCC | 5 cut(s) | 191, 907, 980, 1510, 1592 |
| PspPPI | RGGWCCY | 2 cut(s) | 907, 1592 |
| PsuI | RGATCY | 5 cut(s) | 349, 2041, 2074, 2328, 3303 |
| PvuII | CAGCTG | 1 cut(s) | 1233 |
| RsaI | GTAC | 8 cut(s) | 62, 679, 901, 1530, 1658, 1664, 1805, 3242 |
| RsaNI | GTAC | 8 cut(s) | 61, 678, 900, 1529, 1657, 1663, 1804, 3241 |
| RseI | CAYNNNNRTG | 2 cut(s) | 120, 1053 |
| SacI | GAGCTC | 2 cut(s) | 2481, 2572 |
| SaqAI | TTAA | 9 cut(s) | 171, 830, 947, 1113, 1313, 1953, 2391, 2424, 2444 |
| SatI | GCNGC | 7 cut(s) | 27, 30, 126, 1419, 2429, 2489, 2639 |
| Sau96I | GGNCC | 5 cut(s) | 191, 907, 980, 1510, 1592 |
| ScaI | AGTACT | 1 cut(s) | 3242 |
| SchI | GAGTC | 4 cut(s) | 554, 1850, 1975, 2632 |
| ScrFI | CCNGG | 4 cut(s) | 984, 2785, 2874, 2889 |
| SduI | GDGCHC | 5 cut(s) | 2168, 2481, 2572, 2680, 2728 |
| SfaNI | GCATC | 8 cut(s) | 298, 930, 1191, 1405, 2418, 2678, 2794, 2999 |
| SfcI | CTRYAG | 1 cut(s) | 864 |
| Sfr274I | CTCGAG | 2 cut(s) | 1838, 2586 |
| SinI | GGWCC | 3 cut(s) | 191, 907, 1592 |
| SlaI | CTCGAG | 2 cut(s) | 1838, 2586 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 120, 1053 |
| SmlI | CTYRAG | 5 cut(s) | 170, 1176, 1524, 1838, 2586 |
| SmoI | CTYRAG | 5 cut(s) | 170, 1176, 1524, 1838, 2586 |
| SsiI | CCGC | 6 cut(s) | 97, 1418, 1423, 2979, 3113, 3180 |
| SspI | AATATT | 4 cut(s) | 1279, 1895, 2648, 3193 |
| SspMI | CTAG | 4 cut(s) | 561, 1008, 1986, 3117 |
| SstI | GAGCTC | 2 cut(s) | 2481, 2572 |
| StyD4I | CCNGG | 4 cut(s) | 982, 2783, 2872, 2887 |
| StyI | CCWWGG | 4 cut(s) | 153, 1541, 1637, 2729 |
| TaaI | ACNGT | 9 cut(s) | 414, 1603, 1647, 1695, 2054, 2120, 2442, 2533, 2857 |
| TaiI | ACGT | 5 cut(s) | 1451, 1664, 1788, 2845, 3150 |
| TaqII | GACCGA | 1 cut(s) | 2139 |
| TatI | WGTACW | 3 cut(s) | 1528, 1803, 3240 |
| TauI | GCSGC | 1 cut(s) | 1421 |
| Tru1I | TTAA | 9 cut(s) | 171, 830, 947, 1113, 1313, 1953, 2391, 2424, 2444 |
| Tru9I | TTAA | 9 cut(s) | 171, 830, 947, 1113, 1313, 1953, 2391, 2424, 2444 |
| TscAI | CASTG | 4 cut(s) | 669, 2274, 2529, 3217 |
| TseFI | GTSAC | 7 cut(s) | 165, 821, 1220, 1376, 2114, 2120, 3032 |
| TseI | GCWGC | 6 cut(s) | 26, 29, 125, 2428, 2488, 2638 |
| Tsp45I | GTSAC | 7 cut(s) | 165, 821, 1220, 1376, 2114, 2120, 3032 |
| TspGWI | ACGGA | 1 cut(s) | 1208 |
| TspRI | CASTG | 4 cut(s) | 669, 2274, 2529, 3217 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| Vha464I | CTTAAG | 1 cut(s) | 170 |
| VneI | GTGCAC | 1 cut(s) | 2164 |
| VpaK11BI | GGWCC | 3 cut(s) | 191, 907, 1592 |
| XapI | RAATTY | 7 cut(s) | 104, 1565, 1703, 2133, 2496, 2934, 3071 |
| XceI | RCATGY | 3 cut(s) | 1353, 2660, 3175 |
| XhoI | CTCGAG | 2 cut(s) | 1838, 2586 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1086 |
| XspI | CTAG | 4 cut(s) | 561, 1008, 1986, 3117 |
| ZrmI | AGTACT | 1 cut(s) | 3242 |
| Zsp2I | ATGCAT | 3 cut(s) | 291, 313, 1404 |