pycom05g13680

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
17173476 .. 17176934
3459 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13680.3

Sequence Viewer

Length: 2919 bp
ATGGAGTTGGTTGCGTTCATTCAAGTTTTCAACATCATCGTCATCGCCATCGGGACTCTGTTCTACATGTGCTGCAGGTCTTTGACATTTTCTTCTTCTTCCTCTTCTGCGGTTGATTCTGCTGTAGCTGATTGTGCTGCTGTTGCTGATGACGAGGATGCTGATATCCCCCCACGTCGAGAAAAGTATGATGTGTTTATCAGTTTCAGAGGTGAGGACACCCGCCTTGGTATTACCAGCCATCTTCATGCTGCCTTACTTCAGAAGAAAATTGAAACCTACATCGATTACAGACTTCAGAGAGGAAAAGAAATCGGACCTGCCCTTCTAGAAGCAATCAAGAAATCCACCATTTCGGTGATCATTTTCTCACAAAACTATGCTTCTTCCACATGGTGTCTGGATGAGCTTGTGCATATACTCGAATGCAACAACAGAGAAGGCCGGATGGTTATACCCATATTCTATGGCATCAATCCATCTGATGTACGAAAACAATACGGGAGTTATGCAGATGCATTTGCTCAACTTGAAAAACGTTTCGAGAACAGTATCCCCAAGGTGCACAAGTGGGGGGATGCTTTGACGACTGCGGCCAATCTATCTGGGTTTGATTATTCAAACAAATCCGGGACTGAGGCAGATCGATTTCAAAAGGTTGTCGATCATATTTGGATACAACTGTGTCGCGAATCATCCTGCGATTTAAATGGGTTTGTTGGAATTGAAAGCCGCATCGAGCAGATCGAATTGCTGCTGGGCATTCATTCACAGGACGCTTGCATCACTGTCGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCCGAGGCTGTATTTCGCAAACACTCTTCTAAGTTCGAAGCTTCTTGTTTTCTTAAGAACGTTACGGAGAACTCAGAACAAGCAGGTGGACTAGATCACTTGGAAAAAACACTTCTTAAGGAGATATTAAAGGAAGAAGCTCTGCCTCTAGGATCAAATTTGGTTCGAGAAAGGCTCAGCCGCACAAAGGTCCTCATTGTTCTTGATGATGTGAGTAGTTCAATGCAAATAGAACGTTTAGCTGACGATCGTATTCGGTATGGCCCTGGAAGTAGAATCATTATCACAACTAGAGATAGGAGCACACTTGGGCAAACTGTTGAAGAGGATTACATCTACAAGGTTGAGGTATTAAAACCAGATGACGCTCTTCAGCTCTTCTGTTCGCATGCTTTCAAGAAAAACAGTACTCGTAGAACAGATTATAAGGAGTCGGCAGTTGTGCATTATGCCGGAGGCGTTCCTTTAGCTCTTATAGTTCTGGGGTCATTGTTCTTCAATTGCAAGAGCAAAGAAGACTGGGAAGATGAATTCAACAAACTGAAACGATTTACCAGCGAAAGTGTCCAGAAAGTGTGGAGAATAAGTTACGATAGATTGGAAAGAAATGAGAAGGAGATATTTCTGGATATAGCATGTCTTTATAAAGGGATGCGTTTGGAGTATGTCAAGCGAATGTTAAATGTTCGTGGATTTTTTTCGACAACCGGAATTAGACTTCTCATTGATATGTCTCTCATATCAATTGATTCAAAATGGGAAGGGGAAACCATACAGATGCATGATTTGCTACAAGAAATGGGAAGGACAATTGTTCAAGAACAATGTATAGAAATGGGAAGGACAATTGTTCAAGAACAATGTATTAAAGATCCTGGTAAACAGGATAGGTTGTTCACTAATGAGGATATCTATTGTGTATTGAAGAGTAACACGGAAACTCCAAATGTTGAAGCCATATTCGCTAATTCTCCTTATTCTCTACACCTTCCGAATTCTCTTTGTTATCTTGAGTGGTGGGGATATCCACTGGAATCTTTGCCGTCAACTTTTTCTCCGAAAAATCTAGTTGAGCTTCGTATGCCAGGTAGCAACGTTAAGATGCTTTGGAAAGAAGAGCAGATACTTGTCAACTTACAAGTTATCAATCTGTCGTTCTGTACAAATCTAACTAAAGTTCCAAATCTCTCTGGGAGTCTAAAAATTATGCACATAAATCTCTCTGGCTGTGAACGTTTGGTTGAAATTCCTGGGTGTTTTCAACATCTTGACAAGCTTACTCGTTTTGATCTTCAAGATTGCACCAGCCTCAAGTATCTTCCAGAGATGCCAGGAAGTATTAAATACTTAGATTTACAAGAAAGTGGTATAAAGGAGTTGCCTGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTGAATATAAGTCATTGCAAAGACCTTGAGAAACTTCCAAGCAACAGGTGTAAACTCAAAGTCTCTGGTTGTTTTAATCTAGATGGCTGCACATCTCTTGGCGAGTTTTCTGAGCTTCCCAGGGATATAACTACATTATCATTGGTTGGTTGCAAGAGACTTGTGAGTCTACCAACCAACATTTGGAAGTTGAAATATCTGCAGGAACTCAATCTCTCTGGCAGCTCTAAACTTGTAAACTTCCCGGAGATCTTGGAGCCAATGGAACATTTGAAGTTCTTAAATTTAAGTGGAACAGCGGTTAAAGAGCTACCATCATCAATTGAGTTTCTCCCTGGTCTCAAAATAATTCAACTAAAAGGTTGCTATAGGCTGTCAAGTATCCCAAAGAGCATTTGTAAGTTGAAATGTCTTGAGGAACTCGATATATCTGGGTGCGGTATACGAAACTTCCCAAAGATCTTGGAGCCAATGGAAAATTTGAGGTCCTTAATTATAAGCAGAACATCGGTTGAACAGCTATACACATCATCAATTGAATTTTTCCCCGCTCTCGAAAATATTGAGCGAGAAGGTTGCAATATGCTTTCCTGTATATCAAAAAGCAAGTTGAAATATGTTAAAAGACCTGATGAGTATGAAACAAGTGAAAGTGATCGATCATGGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

973

Amino Acids

110.3

Weight (kDa)

5.85

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1257, 1476, 2744
AarI CACCTGC 1 cut(s) 905
AasI GACNNNNNNGTC 1 cut(s) 2412
Acc36I ACCTGC 3 cut(s) 66, 328, 905
AccB7I CCANNNNNTGG 1 cut(s) 2430
AccBSI CCGCTC 1 cut(s) 2798
AccI GTMKAC 2 cut(s) 2416, 2689
AccII CGCG 1 cut(s) 690
AciI CCGC 8 cut(s) 110, 223, 593, 733, 1012, 2546, 2685, 2796
AclI AACGTT 5 cut(s) 538, 891, 1066, 1926, 2065
AclWI GGATC 2 cut(s) 991, 1697
AcoI YGGCCR 1 cut(s) 594
AcsI RAATTY 7 cut(s) 988, 1361, 1825, 2076, 2530, 2725, 2786
AcuI CTGAAG 3 cut(s) 245, 281, 1187
AdeI CACNNNGTG 1 cut(s) 396
AfaI GTAC 3 cut(s) 489, 1240, 1993
AfiI CCNNNNNNNGG 3 cut(s) 835, 1018, 2430
AflII CTTAAG 2 cut(s) 884, 947
AflIII ACRYGT 1 cut(s) 66
AjiI CACGTC 1 cut(s) 176
AjnI CCWGG 7 cut(s) 1096, 1705, 1915, 2080, 2161, 2366, 2581
AloI GAACNNNNNNTCC 2 cut(s) 1709, 1741
Alw21I GWGCWC 2 cut(s) 567, 1136
Alw26I GTCTC 4 cut(s) 1569, 2314, 2398, 2591
Alw44I GTGCAC 1 cut(s) 563
AlwI GGATC 2 cut(s) 991, 1697
AoxI GGCC 3 cut(s) 442, 594, 1093
ApaLI GTGCAC 1 cut(s) 563
ApeKI GCWGC 6 cut(s) 72, 137, 251, 754, 2334, 2469
ApoI RAATTY 7 cut(s) 988, 1361, 1825, 2076, 2530, 2725, 2786
AspS9I GGNCC 4 cut(s) 317, 1021, 1094, 2733
AsuC2I CCSGG 2 cut(s) 631, 2492
AsuHPI GGTGA 2 cut(s) 224, 370
AsuII TTCGAA 1 cut(s) 867
AvaII GGWCC 3 cut(s) 317, 1021, 2733
BaeGI GKGCMC 1 cut(s) 567
BaeI ACNNNNGTAYC 2 cut(s) 668, 701
BarI GAAGNNNNNNTAC 2 cut(s) 1938, 1970
BbsI GAAGAC 1 cut(s) 1353
Bbv12I GWGCWC 2 cut(s) 567, 1136
BbvI GCAGC 6 cut(s) 59, 124, 238, 741, 2321, 2481
BccI CCATC 6 cut(s) 56, 249, 442, 487, 2324, 2569
BceAI ACGGC 1 cut(s) 1858
BcgI CGANNNNNNTGC 4 cut(s) 772, 806, 2805, 2839
BciT130I CCWGG 7 cut(s) 1098, 1707, 1917, 2082, 2163, 2368, 2583
BciVI GTATCC 3 cut(s) 563, 669, 2639
BclI TGATCA 1 cut(s) 360
BcnI CCSGG 2 cut(s) 631, 2492
BcoDI GTCTC 4 cut(s) 1569, 2314, 2398, 2591
BfaI CTAG 6 cut(s) 329, 923, 980, 1122, 1898, 2327
BfmI CTRYAG 4 cut(s) 73, 123, 2447, 2614
BfrI CTTAAG 2 cut(s) 884, 947
BfuAI ACCTGC 3 cut(s) 66, 328, 905
BfuI GTATCC 3 cut(s) 563, 669, 2639
BglII AGATCT 2 cut(s) 2496, 2706
BisI GCNGC 9 cut(s) 73, 138, 252, 594, 733, 755, 1012, 2335, 2470
BlpI GCTNAGC 1 cut(s) 1007
BlsI GCNGC 9 cut(s) 74, 139, 253, 595, 734, 756, 1013, 2336, 2471
BmcAI AGTACT 1 cut(s) 1240
Bme1390I CCNGG 9 cut(s) 631, 1098, 1707, 1917, 2082, 2163, 2368, 2492, 2583
Bme18I GGWCC 3 cut(s) 317, 1021, 2733
BmgBI CACGTC 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 317, 1021, 1094, 2733
BmiI GGNNCC 2 cut(s) 2505, 2715
BmrFI CCNGG 9 cut(s) 631, 1098, 1707, 1917, 2082, 2163, 2368, 2492, 2583
BmrI ACTGGG 1 cut(s) 1360
BmuI ACTGGG 1 cut(s) 1360
BpiI GAAGAC 1 cut(s) 1353
BplI GAGNNNNNCTC 2 cut(s) 990, 1022
Bpu1102I GCTNAGC 1 cut(s) 1007
Bpu14I TTCGAA 1 cut(s) 867
BpuEI CTTGAG 4 cut(s) 1862, 2126, 2294, 2681
BpuMI CCSGG 2 cut(s) 631, 2492
Bsa29I ATCGAT 3 cut(s) 285, 646, 2905
BsaI GGTCTC 1 cut(s) 2591
BsaJI CCNNGG 8 cut(s) 226, 558, 834, 1096, 2081, 2366, 2367, 2581
BsaWI WCCGGW 1 cut(s) 1538
BsaXI ACNNNNNCTCC 6 cut(s) 1402, 1432, 1756, 1786, 1870, 1900
Bsc4I CCNNNNNNNGG 3 cut(s) 835, 1018, 2430
Bse1I ACTGG 2 cut(s) 1355, 1866
Bse3DI GCAATG 1 cut(s) 2260
BseBI CCWGG 7 cut(s) 1098, 1707, 1917, 2082, 2163, 2368, 2583
BseCI ATCGAT 3 cut(s) 285, 646, 2905
BseDI CCNNGG 8 cut(s) 226, 558, 834, 1096, 2081, 2366, 2367, 2581
BseGI GGATG 6 cut(s) 163, 409, 453, 583, 695, 1488
BseLI CCNNNNNNNGG 3 cut(s) 835, 1018, 2430
BseMI GCAATG 1 cut(s) 2260
BseMII CTCAG 4 cut(s) 627, 918, 1021, 2349
BseNI ACTGG 2 cut(s) 1355, 1866
BseSI GKGCMC 1 cut(s) 567
BseXI GCAGC 6 cut(s) 59, 124, 238, 741, 2321, 2481
BseYI CCCAGC 1 cut(s) 757
BsgI GTGCAG 1 cut(s) 2320
Bsh1236I CGCG 1 cut(s) 690
Bsh1285I CGRYCG 1 cut(s) 1081
BshFI GGCC 3 cut(s) 444, 596, 1095
BshVI ATCGAT 3 cut(s) 285, 646, 2905
BsiEI CGRYCG 1 cut(s) 1081
BsiHKAI GWGCWC 2 cut(s) 567, 1136
BsiSI CCGG 5 cut(s) 445, 630, 1284, 1539, 2492
BslFI GGGAC 2 cut(s) 67, 646
BslI CCNNNNNNNGG 3 cut(s) 835, 1018, 2430
BsmAI GTCTC 4 cut(s) 1569, 2314, 2398, 2591
BsmFI GGGAC 2 cut(s) 67, 646
BsmI GAATGC 2 cut(s) 431, 762
BsnI GGCC 3 cut(s) 444, 596, 1095
Bso31I GGTCTC 1 cut(s) 2591
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 2 cut(s) 567, 1136
Bsp1407I TGTACA 1 cut(s) 1991
Bsp1720I GCTNAGC 1 cut(s) 1007
Bsp68I TCGCGA 1 cut(s) 690
BspACI CCGC 8 cut(s) 110, 223, 593, 733, 1012, 2546, 2685, 2796
BspANI GGCC 3 cut(s) 444, 596, 1095
BspCNI CTCAG 4 cut(s) 628, 917, 1020, 2350
BspDI ATCGAT 3 cut(s) 285, 646, 2905
BspFNI CGCG 1 cut(s) 690
BspLI GGNNCC 2 cut(s) 2505, 2715
BspMAI CTGCAG 2 cut(s) 77, 2451
BspMI ACCTGC 3 cut(s) 66, 328, 905
BspPI GGATC 2 cut(s) 991, 1697
BspQI GCTCTTC 3 cut(s) 1206, 1214, 1941
BspT104I TTCGAA 1 cut(s) 867
BspTI CTTAAG 2 cut(s) 884, 947
BspTNI GGTCTC 1 cut(s) 2591
BsrBI CCGCTC 1 cut(s) 2798
BsrDI GCAATG 1 cut(s) 2260
BsrGI TGTACA 1 cut(s) 1991
BsrI ACTGG 2 cut(s) 1355, 1866
BssECI CCNNGG 8 cut(s) 226, 558, 834, 1096, 2081, 2366, 2367, 2581
BssNAI GTATAC 1 cut(s) 2690
BssT1I CCWWGG 2 cut(s) 226, 558
Bst1107I GTATAC 1 cut(s) 2690
Bst2UI CCWGG 7 cut(s) 1098, 1707, 1917, 2082, 2163, 2368, 2583
Bst4CI ACNGT 5 cut(s) 551, 684, 790, 1150, 1238
Bst6I CTCTTC 7 cut(s) 109, 862, 1149, 1206, 1214, 1751, 1941
BstAFI CTTAAG 2 cut(s) 884, 947
BstAPI GCANNNNNTGC 1 cut(s) 1618
BstAUI TGTACA 1 cut(s) 1991
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 2 cut(s) 781, 1221
BstDEI CTNAG 6 cut(s) 636, 861, 904, 1007, 2179, 2358
BstENI CCTNNNNNAGG 1 cut(s) 833
BstF5I GGATG 6 cut(s) 163, 409, 453, 583, 695, 1488
BstFNI CGCG 1 cut(s) 690
BstMAI GTCTC 4 cut(s) 1569, 2314, 2398, 2591
BstMCI CGRYCG 1 cut(s) 1081
BstMWI GCNNNNNNNGC 5 cut(s) 134, 143, 1618, 1793, 1912
BstNI CCWGG 7 cut(s) 1098, 1707, 1917, 2082, 2163, 2368, 2583
BstNSI RCATGY 3 cut(s) 70, 1223, 1470
BstSCI CCNGG 9 cut(s) 629, 1096, 1705, 1915, 2080, 2161, 2366, 2490, 2581
BstSFI CTRYAG 4 cut(s) 73, 123, 2447, 2614
BstSLI GKGCMC 1 cut(s) 567
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 6 cut(s) 59, 124, 238, 741, 2321, 2481
BstV2I GAAGAC 1 cut(s) 1353
BstX2I RGATCY 3 cut(s) 1702, 2496, 2706
BstYI RGATCY 3 cut(s) 1702, 2496, 2706
BstZ17I GTATAC 1 cut(s) 2690
Bsu15I ATCGAT 3 cut(s) 285, 646, 2905
BsuI GTATCC 3 cut(s) 563, 669, 2639
BsuRI GGCC 3 cut(s) 444, 596, 1095
BsuTUI ATCGAT 3 cut(s) 285, 646, 2905
BtgZI GCGATG 1 cut(s) 28
BtrI CACGTC 1 cut(s) 176
BtsCI GGATG 6 cut(s) 163, 409, 453, 583, 695, 1488
BtsIMutI CAGTG 2 cut(s) 786, 1859
BtuMI TCGCGA 1 cut(s) 690
BveI ACCTGC 3 cut(s) 66, 328, 905
Cac8I GCNNGC 2 cut(s) 781, 1221
Cfr13I GGNCC 4 cut(s) 317, 1021, 1094, 2733
ClaI ATCGAT 3 cut(s) 285, 646, 2905
CseI GACGC 2 cut(s) 785, 1205
Csp6I GTAC 3 cut(s) 488, 1239, 1992
CviAII CATG 8 cut(s) 67, 248, 393, 805, 1220, 1467, 1613, 2910
CviQI GTAC 3 cut(s) 488, 1239, 1992
DdeI CTNAG 6 cut(s) 636, 861, 904, 1007, 2179, 2358
DraI TTTAAA 1 cut(s) 708
DraIII CACNNNGTG 1 cut(s) 396
DrdI GACNNNNNNGTC 1 cut(s) 2412
DseDI GACNNNNNNGTC 1 cut(s) 2412
EaeI YGGCCR 1 cut(s) 594
Eam1104I CTCTTC 7 cut(s) 109, 862, 1149, 1206, 1214, 1751, 1941
EarI CTCTTC 7 cut(s) 109, 862, 1149, 1206, 1214, 1751, 1941
Eco130I CCWWGG 2 cut(s) 226, 558
Eco31I GGTCTC 1 cut(s) 2591
Eco32I GATATC 3 cut(s) 166, 1741, 1856
Eco47I GGWCC 3 cut(s) 317, 1021, 2733
Eco57I CTGAAG 3 cut(s) 245, 281, 1187
EcoNI CCTNNNNNAGG 1 cut(s) 833
EcoO109I RGGNCCY 2 cut(s) 1021, 2733
EcoRI GAATTC 2 cut(s) 1361, 1825
EcoRII CCWGG 7 cut(s) 1096, 1705, 1915, 2080, 2161, 2366, 2581
EcoRV GATATC 3 cut(s) 166, 1741, 1856
EcoT14I CCWWGG 2 cut(s) 226, 558
EcoT22I ATGCAT 2 cut(s) 520, 1614
ErhI CCWWGG 2 cut(s) 226, 558
FaeI CATG 8 cut(s) 70, 251, 396, 808, 1223, 1470, 1616, 2913
FaqI GGGAC 2 cut(s) 67, 646
FatI CATG 8 cut(s) 66, 247, 392, 804, 1219, 1466, 1612, 2909
FauI CCCGC 2 cut(s) 230, 2803
FbaI TGATCA 1 cut(s) 360
FblI GTMKAC 2 cut(s) 2416, 2689
Fnu4HI GCNGC 9 cut(s) 73, 138, 252, 594, 733, 755, 1012, 2335, 2470
FokI GGATG 6 cut(s) 170, 416, 460, 590, 682, 1495
Fsp4HI GCNGC 9 cut(s) 73, 138, 252, 594, 733, 755, 1012, 2335, 2470
FspBI CTAG 6 cut(s) 329, 923, 980, 1122, 1898, 2327
GluI GCNGC 9 cut(s) 73, 138, 252, 594, 733, 755, 1012, 2335, 2470
GsaI CCCAGC 1 cut(s) 761
HaeIII GGCC 3 cut(s) 444, 596, 1095
HapII CCGG 5 cut(s) 445, 630, 1284, 1539, 2492
HgaI GACGC 2 cut(s) 785, 1205
Hin1II CATG 8 cut(s) 70, 251, 396, 808, 1223, 1470, 1616, 2913
HincII GTYRAC 2 cut(s) 1878, 1963
HindII GTYRAC 2 cut(s) 1878, 1963
HindIII AAGCTT 2 cut(s) 870, 2105
HpaII CCGG 5 cut(s) 445, 630, 1284, 1539, 2492
HphI GGTGA 2 cut(s) 224, 370
Hpy99I CGWCG 1 cut(s) 180
HpyAV CCTTC 8 cut(s) 335, 434, 1438, 1586, 1629, 1665, 1829, 2813
HpyCH4III ACNGT 5 cut(s) 551, 684, 790, 1150, 1238
HpyCH4IV ACGT 6 cut(s) 175, 538, 891, 1066, 1926, 2065
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 143, 1618, 1793, 1912
HpyF3I CTNAG 6 cut(s) 636, 861, 904, 1007, 2179, 2358
HpySE526I ACGT 6 cut(s) 175, 538, 891, 1066, 1926, 2065
Hsp92II CATG 8 cut(s) 70, 251, 396, 808, 1223, 1470, 1616, 2913
Ksp22I TGATCA 1 cut(s) 360
LguI GCTCTTC 3 cut(s) 1206, 1214, 1941
LmnI GCTCC 3 cut(s) 1131, 2503, 2713
Lsp1109I GCAGC 6 cut(s) 59, 124, 238, 741, 2321, 2481
MaeI CTAG 6 cut(s) 329, 923, 980, 1122, 1898, 2327
MaeII ACGT 6 cut(s) 175, 538, 891, 1066, 1926, 2065
MaeIII GTNAC 3 cut(s) 892, 1418, 1760
MbiI CCGCTC 1 cut(s) 2798
MfeI CAATTG 6 cut(s) 1330, 1575, 1641, 1677, 2568, 2781
MflI RGATCY 3 cut(s) 1702, 2496, 2706
MhlI GDGCHC 2 cut(s) 567, 1136
MlyI GAGTC 4 cut(s) 49, 1271, 2035, 2422
MmeI TCCRAC 1 cut(s) 700
Mph1103I ATGCAT 2 cut(s) 520, 1614
MslI CAYNNNNRTG 4 cut(s) 246, 356, 1559, 1607
MspA1I CMGCKG 1 cut(s) 2546
MspCI CTTAAG 2 cut(s) 884, 947
MspI CCGG 5 cut(s) 445, 630, 1284, 1539, 2492
MspR9I CCNGG 9 cut(s) 631, 1098, 1707, 1917, 2082, 2163, 2368, 2492, 2583
MunI CAATTG 6 cut(s) 1330, 1575, 1641, 1677, 2568, 2781
Mva1269I GAATGC 2 cut(s) 431, 762
MvaI CCWGG 7 cut(s) 1098, 1707, 1917, 2082, 2163, 2368, 2583
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 5 cut(s) 134, 143, 1618, 1793, 1912
NciI CCSGG 2 cut(s) 631, 2492
NlaIII CATG 8 cut(s) 70, 251, 396, 808, 1223, 1470, 1616, 2913
NlaIV GGNNCC 2 cut(s) 2505, 2715
NmeAIII GCCGAG 1 cut(s) 859
NruI TCGCGA 1 cut(s) 690
NsiI ATGCAT 2 cut(s) 520, 1614
NspI RCATGY 3 cut(s) 70, 1223, 1470
NspV TTCGAA 1 cut(s) 867
PaeI GCATGC 1 cut(s) 1223
PaqCI CACCTGC 1 cut(s) 905
PasI CCCWGGG 1 cut(s) 2367
PciI ACATGT 1 cut(s) 66
PciSI GCTCTTC 3 cut(s) 1206, 1214, 1941
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PctI GAATGC 2 cut(s) 431, 762
PfeI GAWTC 6 cut(s) 116, 692, 1107, 1580, 1865, 2216
PflMI CCANNNNNTGG 1 cut(s) 2430
PfoI TCCNGGA 2 cut(s) 629, 2490
PkrI GCNGC 9 cut(s) 74, 139, 253, 595, 734, 756, 1013, 2336, 2471
Ple19I CGATCG 1 cut(s) 1081
PleI GAGTC 4 cut(s) 49, 1270, 2034, 2421
PpsI GAGTC 4 cut(s) 49, 1270, 2034, 2421
PpuMI RGGWCCY 2 cut(s) 1021, 2733
PscI ACATGT 1 cut(s) 66
PsiI TTATAA 3 cut(s) 1257, 1476, 2744
Psp1406I AACGTT 5 cut(s) 538, 891, 1066, 1926, 2065
Psp5II RGGWCCY 2 cut(s) 1021, 2733
Psp6I CCWGG 7 cut(s) 1096, 1705, 1915, 2080, 2161, 2366, 2581
PspFI CCCAGC 1 cut(s) 757
PspGI CCWGG 7 cut(s) 1096, 1705, 1915, 2080, 2161, 2366, 2581
PspN4I GGNNCC 2 cut(s) 2505, 2715
PspPI GGNCC 4 cut(s) 317, 1021, 1094, 2733
PspPPI RGGWCCY 2 cut(s) 1021, 2733
PstI CTGCAG 2 cut(s) 77, 2451
PsuI RGATCY 3 cut(s) 1702, 2496, 2706
PvuI CGATCG 1 cut(s) 1081
RruI TCGCGA 1 cut(s) 690
RsaI GTAC 3 cut(s) 489, 1240, 1993
RsaNI GTAC 3 cut(s) 488, 1239, 1992
RseI CAYNNNNRTG 4 cut(s) 246, 356, 1559, 1607
SapI GCTCTTC 3 cut(s) 1206, 1214, 1941
SatI GCNGC 9 cut(s) 73, 138, 252, 594, 733, 755, 1012, 2335, 2470
Sau96I GGNCC 4 cut(s) 317, 1021, 1094, 2733
ScaI AGTACT 1 cut(s) 1240
SchI GAGTC 4 cut(s) 49, 1271, 2035, 2422
ScrFI CCNGG 9 cut(s) 631, 1098, 1707, 1917, 2082, 2163, 2368, 2492, 2583
SduI GDGCHC 2 cut(s) 567, 1136
SfcI CTRYAG 4 cut(s) 73, 123, 2447, 2614
SfuI TTCGAA 1 cut(s) 867
SinI GGWCC 3 cut(s) 317, 1021, 2733
SmiI ATTTAAAT 1 cut(s) 708
SmiMI CAYNNNNRTG 4 cut(s) 246, 356, 1559, 1607
SmlI CTYRAG 6 cut(s) 884, 947, 1841, 2141, 2273, 2660
SmoI CTYRAG 6 cut(s) 884, 947, 1841, 2141, 2273, 2660
SphI GCATGC 1 cut(s) 1223
SsiI CCGC 8 cut(s) 110, 223, 593, 733, 1012, 2546, 2685, 2796
SspI AATATT 2 cut(s) 2239, 2809
SspMI CTAG 6 cut(s) 329, 923, 980, 1122, 1898, 2327
StyD4I CCNGG 9 cut(s) 629, 1096, 1705, 1915, 2080, 2161, 2366, 2490, 2581
StyI CCWWGG 2 cut(s) 226, 558
SwaI ATTTAAAT 1 cut(s) 708
TaaI ACNGT 5 cut(s) 551, 684, 790, 1150, 1238
TaiI ACGT 6 cut(s) 178, 541, 894, 1069, 1929, 2068
TatI WGTACW 2 cut(s) 1238, 1991
TauI GCSGC 3 cut(s) 596, 735, 1014
TfiI GAWTC 6 cut(s) 116, 692, 1107, 1580, 1865, 2216
TscAI CASTG 2 cut(s) 793, 1866
TseI GCWGC 6 cut(s) 72, 137, 251, 754, 2334, 2469
TspDTI ATGAA 5 cut(s) 7, 236, 755, 1374, 2901
TspGWI ACGGA 2 cut(s) 911, 1781
TspRI CASTG 2 cut(s) 793, 1866
Van91I CCANNNNNTGG 1 cut(s) 2430
Vha464I CTTAAG 2 cut(s) 884, 947
VneI GTGCAC 1 cut(s) 563
VpaK11BI GGWCC 3 cut(s) 317, 1021, 2733
XagI CCTNNNNNAGG 1 cut(s) 833
XapI RAATTY 7 cut(s) 988, 1361, 1825, 2076, 2530, 2725, 2786
XbaI TCTAGA 2 cut(s) 328, 2326
XceI RCATGY 3 cut(s) 70, 1223, 1470
XcmI CCANNNNNNNNNTGG 2 cut(s) 397, 2427
XmiI GTMKAC 2 cut(s) 2416, 2689
XspI CTAG 6 cut(s) 329, 923, 980, 1122, 1898, 2327
ZrmI AGTACT 1 cut(s) 1240
Zsp2I ATGCAT 2 cut(s) 520, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.