Rmu_sc0020815.1_g000002
NBS-LRR Family

Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020815.1
Physical Location & Seq
Forward (+)
3466 .. 5245
1780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020815.1_g000002.1.cds

Sequence Viewer

Length: 1557 bp
atggcagctattagattattgacagtggaaacctacattgattacagacttgagagaggagatgaagttggacccgccctattaaaagcaatcaagaaatcaaagatttctgtgatcattttctcgatagaccaggcttcttccacatggtgcttggatgaacttgcttatatactggaatgcaaggaaacacatggacaacatgtcatacctattttttatgaaatagaaccatcacaagtgcgctaccagaccggaagttatgagactgcatttgctcaacatgaacaatggttgaaggacaagacggacaaggtggccacgtggaaggaagctttagtaaaactagccaacctaatgccagttgctaatcatgaacgaaggttgaaggacaagacggacaaggtgaccaagtggaaggaagctttagtaaaagcagctaacctatctgggtatgattctgatttagttgagcaagttgtcaaagatgtgttggctaaactgaatcgtgaatcatcaagcgatttaactggtttggttggagctgaagactgcattaagaaaattttattggaatcagacattatcccagatgatgttcgtgttcgctctgttgttatctggggtatgggtggtattggcaagaccacacttgctgatgctgtatttcacggactctcttctcaatttgaagcttactgttttcttgaaaatgttagggaacgatcaggcgccaaaggagcttcctctcctgaactgtatcttttgagaaatggactccttggagaattactaggggacaggaatttagctatccatactccaactataggtgctttttacaaagagaggctccgcaatacaaaagtccttgttcttgatgacgtgaaccattcaaaccaattaacatttttacttggagaagtttcatttggtccaggaagtagaataattataacaactcgagatatgcaaccagttaggaagactctactagtgaaggaagtagctggccatgatgttaagatatacgaggtggcagatcatgctgcaggagttccaatagcccttaaaattttgagttcattattccttcaatgccagagcaaagaagaacaggaacttttgtgggagaaattgaaaaagtttcctgatgatgaccttcaaaatgtgtccagagcaagttttgatggattaaaaggaaatgagaaggagatattccttgatatagcatgttttcacaaaaaggagaaactctgtgatgcaaaaagaatgttagctgcctgtggtttatttccagatgttggaattaaaattcccactgatatgtctctcatatcaattaaagacaaccgcatatggatgcacaatgtgatccaagaaatgggttgggagatagtctgggaagaatgtactgaagagccaggaaaacgcagtaggttgcacaatggtgcggacgtctgtcatgtattgaaaaggaatatggtaagagctcaatgcattgacttttcttttgacaaatcttatgaattttcagtggataaactaactagctaa

Protein Analysis

518

Amino Acids

58.43

Weight (kDa)

6.07

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 956
AatII GACGTC 1 cut(s) 1461
AccB1I GGYRCC 1 cut(s) 731
AccB7I CCANNNNNTGG 2 cut(s) 1304, 1384
AciI CCGC 4 cut(s) 75, 856, 1354, 1454
AclWI GGATC 1 cut(s) 1369
AcoI YGGCCR 2 cut(s) 318, 1012
AcsI RAATTY 5 cut(s) 564, 805, 1074, 1314, 1529
AcuI CTGAAG 2 cut(s) 567, 1437
AcvI CACGTG 1 cut(s) 324
AcyI GRCGYC 2 cut(s) 732, 1458
AdeI CACNNNGTG 2 cut(s) 150, 1372
AfaI GTAC 1 cut(s) 1414
AfiI CCNNNNNNNGG 3 cut(s) 830, 1304, 1384
AflIII ACRYGT 1 cut(s) 202
AgsI TTSAA 9 cut(s) 298, 388, 692, 710, 897, 1097, 1141, 1166, 1474
AhdI GACNNNNNGTC 1 cut(s) 203
AhlI ACTAGT 1 cut(s) 994
AjiI CACGTC 1 cut(s) 886
AjnI CCWGG 3 cut(s) 132, 937, 1423
AjuI GAANNNNNNNTTGG 4 cut(s) 554, 586, 915, 947
AleI CACNNNNGTG 1 cut(s) 1449
Alw21I GWGCWC 1 cut(s) 1495
Alw26I GTCTC 2 cut(s) 260, 1335
AlwI GGATC 1 cut(s) 1369
Ama87I CYCGRG 1 cut(s) 963
AoxI GGCC 2 cut(s) 318, 1012
ApeKI GCWGC 4 cut(s) 5, 437, 1049, 1280
ApoI RAATTY 5 cut(s) 564, 805, 1074, 1314, 1529
ArsI GACNNNNNNTTYG 2 cut(s) 1496, 1528
AspLEI GCGC 2 cut(s) 246, 734
AspS9I GGNCC 2 cut(s) 71, 935
AsuHPI GGTGA 1 cut(s) 418
AvaI CYCGRG 1 cut(s) 963
AvaII GGWCC 2 cut(s) 71, 935
BalI TGGCCA 2 cut(s) 320, 1014
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 1495
BbrPI CACGTG 1 cut(s) 324
BbsI GAAGAC 2 cut(s) 555, 992
Bbv12I GWGCWC 1 cut(s) 1495
BbvI GCAGC 4 cut(s) 17, 449, 1036, 1267
BccI CCATC 2 cut(s) 241, 1184
BciT130I CCWGG 3 cut(s) 134, 939, 1425
BclI TGATCA 1 cut(s) 114
BcoDI GTCTC 2 cut(s) 260, 1335
BcuI ACTAGT 1 cut(s) 994
BfaI CTAG 4 cut(s) 347, 794, 995, 1551
BfmI CTRYAG 2 cut(s) 828, 1050
BfoI RGCGCY 1 cut(s) 735
BisI GCNGC 4 cut(s) 6, 438, 1050, 1281
BlsI GCNGC 4 cut(s) 7, 439, 1051, 1282
Bme1390I CCNGG 3 cut(s) 134, 939, 1425
Bme18I GGWCC 2 cut(s) 71, 935
BmeRI GACNNNNNGTC 1 cut(s) 203
BmeT110I CYCGRG 1 cut(s) 963
BmgBI CACGTC 1 cut(s) 886
BmgT120I GGNCC 2 cut(s) 71, 935
BmiI GGNNCC 3 cut(s) 73, 733, 854
BmrFI CCNGG 3 cut(s) 134, 939, 1425
BmsI GCATC 3 cut(s) 649, 1252, 1353
BoxI GACNNNNGTC 1 cut(s) 1461
BpiI GAAGAC 2 cut(s) 555, 992
BpuEI CTTGAG 1 cut(s) 71
BsaAI YACGTR 1 cut(s) 324
BsaHI GRCGYC 2 cut(s) 732, 1458
BsaJI CCNNGG 1 cut(s) 781
BsaWI WCCGGW 1 cut(s) 254
BsaXI ACNNNNNCTCC 2 cut(s) 51, 81
Bsc4I CCNNNNNNNGG 3 cut(s) 830, 1304, 1384
Bse1I ACTGG 4 cut(s) 180, 362, 535, 977
BseBI CCWGG 3 cut(s) 134, 939, 1425
BseDI CCNNGG 1 cut(s) 781
BseGI GGATG 2 cut(s) 163, 1368
BseLI CCNNNNNNNGG 3 cut(s) 830, 1304, 1384
BseNI ACTGG 4 cut(s) 180, 362, 535, 977
BseRI GAGGAG 1 cut(s) 72
BseXI GCAGC 4 cut(s) 17, 449, 1036, 1267
BshFI GGCC 2 cut(s) 320, 1014
BshNI GGYRCC 1 cut(s) 731
BsiHKAI GWGCWC 1 cut(s) 1495
BsiHKCI CYCGRG 1 cut(s) 963
BsiSI CCGG 1 cut(s) 255
BslFI GGGAC 1 cut(s) 812
BslI CCNNNNNNNGG 3 cut(s) 830, 1304, 1384
BsmAI GTCTC 2 cut(s) 260, 1335
BsmFI GGGAC 1 cut(s) 812
BsmI GAATGC 1 cut(s) 185
BsnI GGCC 2 cut(s) 320, 1014
BsoBI CYCGRG 1 cut(s) 963
Bsp1286I GDGCHC 1 cut(s) 1495
Bsp143I GATC 4 cut(s) 114, 725, 1042, 1374
BspACI CCGC 4 cut(s) 75, 856, 1354, 1454
BspANI GGCC 2 cut(s) 320, 1014
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 3 cut(s) 73, 733, 854
BspMAI CTGCAG 1 cut(s) 1054
BspPI GGATC 1 cut(s) 1369
BspQI GCTCTTC 1 cut(s) 1413
BspT107I GGYRCC 1 cut(s) 731
BsrI ACTGG 4 cut(s) 180, 362, 535, 977
BssECI CCNNGG 1 cut(s) 781
BssMI GATC 4 cut(s) 114, 725, 1042, 1374
BssNI GRCGYC 2 cut(s) 732, 1458
BssT1I CCWWGG 1 cut(s) 781
Bst2UI CCWGG 3 cut(s) 134, 939, 1425
Bst4CI ACNGT 3 cut(s) 25, 701, 759
Bst6I CTCTTC 2 cut(s) 685, 1413
BstACI GRCGYC 2 cut(s) 732, 1458
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstBAI YACGTR 1 cut(s) 324
BstC8I GCNNGC 1 cut(s) 1012
BstEII GGTNACC 1 cut(s) 406
BstF5I GGATG 2 cut(s) 163, 1368
BstH2I RGCGCY 1 cut(s) 735
BstHHI GCGC 2 cut(s) 246, 734
BstKTI GATC 4 cut(s) 117, 728, 1045, 1377
BstMAI GTCTC 2 cut(s) 260, 1335
BstMBI GATC 4 cut(s) 114, 725, 1042, 1374
BstMWI GCNNNNNNNGC 2 cut(s) 740, 1046
BstNI CCWGG 3 cut(s) 134, 939, 1425
BstNSI RCATGY 2 cut(s) 206, 1236
BstPAI GACNNNNGTC 1 cut(s) 1461
BstPI GGTNACC 1 cut(s) 406
BstSCI CCNGG 3 cut(s) 132, 937, 1423
BstSFI CTRYAG 2 cut(s) 828, 1050
BstV1I GCAGC 4 cut(s) 17, 449, 1036, 1267
BstV2I GAAGAC 2 cut(s) 555, 992
BsuRI GGCC 2 cut(s) 320, 1014
BtrI CACGTC 1 cut(s) 886
BtsCI GGATG 2 cut(s) 163, 1368
BtsIMutI CAGTG 3 cut(s) 30, 1320, 1542
Cac8I GCNNGC 1 cut(s) 1012
CciI TCATGA 1 cut(s) 373
CfoI GCGC 2 cut(s) 246, 734
Cfr13I GGNCC 2 cut(s) 71, 935
Csp6I GTAC 1 cut(s) 1413
CviAII CATG 9 cut(s) 147, 194, 203, 284, 374, 1016, 1046, 1233, 1466
CviQI GTAC 1 cut(s) 1413
DinI GGCGCC 1 cut(s) 733
DpnI GATC 4 cut(s) 116, 727, 1044, 1376
DpnII GATC 4 cut(s) 114, 725, 1042, 1374
DraIII CACNNNGTG 2 cut(s) 150, 1372
DriI GACNNNNNGTC 1 cut(s) 203
EaeI YGGCCR 2 cut(s) 318, 1012
Eam1104I CTCTTC 2 cut(s) 685, 1413
Eam1105I GACNNNNNGTC 1 cut(s) 203
EarI CTCTTC 2 cut(s) 685, 1413
Ecl136II GAGCTC 1 cut(s) 1493
Eco130I CCWWGG 1 cut(s) 781
Eco24I GRGCYC 1 cut(s) 1495
Eco47I GGWCC 2 cut(s) 71, 935
Eco53kI GAGCTC 1 cut(s) 1493
Eco57I CTGAAG 2 cut(s) 567, 1437
Eco72I CACGTG 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 963
Eco91I GGTNACC 1 cut(s) 406
EcoICRI GAGCTC 1 cut(s) 1493
EcoO65I GGTNACC 1 cut(s) 406
EcoRII CCWGG 3 cut(s) 132, 937, 1423
EcoT14I CCWWGG 1 cut(s) 781
EcoT22I ATGCAT 1 cut(s) 1502
EcoT38I GRGCYC 1 cut(s) 1495
EgeI GGCGCC 1 cut(s) 733
EheI GGCGCC 1 cut(s) 733
ErhI CCWWGG 1 cut(s) 781
FaeI CATG 9 cut(s) 150, 197, 206, 287, 377, 1019, 1049, 1236, 1469
FaqI GGGAC 1 cut(s) 812
FatI CATG 9 cut(s) 146, 193, 202, 283, 373, 1015, 1045, 1232, 1465
FauI CCCGC 1 cut(s) 82
FauNDI CATATG 1 cut(s) 1358
FbaI TGATCA 1 cut(s) 114
Fnu4HI GCNGC 4 cut(s) 6, 438, 1050, 1281
FokI GGATG 2 cut(s) 170, 1375
FriOI GRGCYC 1 cut(s) 1495
Fsp4HI GCNGC 4 cut(s) 6, 438, 1050, 1281
FspBI CTAG 4 cut(s) 347, 794, 995, 1551
GlaI GCGC 2 cut(s) 245, 733
GluI GCNGC 4 cut(s) 6, 438, 1050, 1281
HaeII RGCGCY 1 cut(s) 735
HaeIII GGCC 2 cut(s) 320, 1014
HapII CCGG 1 cut(s) 255
HhaI GCGC 2 cut(s) 246, 734
Hin1I GRCGYC 2 cut(s) 732, 1458
Hin1II CATG 9 cut(s) 150, 197, 206, 287, 377, 1019, 1049, 1236, 1469
Hin6I GCGC 2 cut(s) 244, 732
HinP1I GCGC 2 cut(s) 244, 732
HindIII AAGCTT 3 cut(s) 333, 423, 693
HinfI GANTC 7 cut(s) 458, 505, 512, 575, 675, 777, 988
HpaII CCGG 1 cut(s) 255
HphI GGTGA 1 cut(s) 418
Hpy166II GTNNAC 1 cut(s) 889
Hpy188I TCNGA 2 cut(s) 463, 580
Hpy8I GTNNAC 1 cut(s) 889
HpyAV CCTTC 9 cut(s) 292, 322, 375, 382, 412, 994, 1103, 1172, 1204
HpyCH4III ACNGT 3 cut(s) 25, 701, 759
HpyCH4IV ACGT 3 cut(s) 323, 885, 1458
HpyCH4V TGCA 9 cut(s) 183, 272, 555, 973, 1052, 1265, 1366, 1444, 1500
HpyF10VI GCNNNNNNNGC 2 cut(s) 740, 1046
HpySE526I ACGT 3 cut(s) 323, 885, 1458
Hsp92I GRCGYC 2 cut(s) 732, 1458
Hsp92II CATG 9 cut(s) 150, 197, 206, 287, 377, 1019, 1049, 1236, 1469
HspAI GCGC 2 cut(s) 244, 732
KasI GGCGCC 1 cut(s) 731
Ksp22I TGATCA 1 cut(s) 114
Kzo9I GATC 4 cut(s) 114, 725, 1042, 1374
LguI GCTCTTC 1 cut(s) 1413
LmnI GCTCC 3 cut(s) 542, 740, 858
Lsp1109I GCAGC 4 cut(s) 17, 449, 1036, 1267
LweI GCATC 3 cut(s) 649, 1252, 1353
MaeI CTAG 4 cut(s) 347, 794, 995, 1551
MaeII ACGT 3 cut(s) 323, 885, 1458
MaeIII GTNAC 1 cut(s) 406
MalI GATC 4 cut(s) 116, 727, 1044, 1376
MboI GATC 4 cut(s) 114, 725, 1042, 1374
MboII GAAGA 7 cut(s) 132, 560, 672, 997, 1124, 1418, 1430
MhlI GDGCHC 1 cut(s) 1495
MlsI TGGCCA 2 cut(s) 320, 1014
MluNI TGGCCA 2 cut(s) 320, 1014
Mly113I GGCGCC 1 cut(s) 732
MlyI GAGTC 3 cut(s) 669, 771, 982
MmeI TCCRAC 4 cut(s) 49, 520, 848, 1285
MnlI CCTC 4 cut(s) 50, 757, 843, 1027
Mox20I TGGCCA 2 cut(s) 320, 1014
Mph1103I ATGCAT 1 cut(s) 1502
MscI TGGCCA 2 cut(s) 320, 1014
MseI TTAA 9 cut(s) 83, 527, 558, 905, 1023, 1071, 1196, 1311, 1344
MslI CAYNNNNRTG 3 cut(s) 1325, 1361, 1449
Msp20I TGGCCA 2 cut(s) 320, 1014
MspI CCGG 1 cut(s) 255
MspR9I CCNGG 3 cut(s) 134, 939, 1425
Mva1269I GAATGC 1 cut(s) 185
MvaI CCWGG 3 cut(s) 134, 939, 1425
MwoI GCNNNNNNNGC 2 cut(s) 740, 1046
NarI GGCGCC 1 cut(s) 732
NdeI CATATG 1 cut(s) 1358
NdeII GATC 4 cut(s) 114, 725, 1042, 1374
NlaIII CATG 9 cut(s) 150, 197, 206, 287, 377, 1019, 1049, 1236, 1469
NlaIV GGNNCC 3 cut(s) 73, 733, 854
NmuCI GTSAC 1 cut(s) 406
NsiI ATGCAT 1 cut(s) 1502
NspI RCATGY 2 cut(s) 206, 1236
OliI CACNNNNGTG 1 cut(s) 1449
PaeR7I CTCGAG 1 cut(s) 963
PagI TCATGA 1 cut(s) 373
PciI ACATGT 1 cut(s) 202
PciSI GCTCTTC 1 cut(s) 1413
PctI GAATGC 1 cut(s) 185
PfeI GAWTC 4 cut(s) 458, 505, 512, 575
PflMI CCANNNNNTGG 2 cut(s) 1304, 1384
PfoI TCCNGGA 1 cut(s) 937
PkrI GCNGC 4 cut(s) 7, 439, 1051, 1282
PleI GAGTC 3 cut(s) 669, 771, 982
PluTI GGCGCC 1 cut(s) 735
PmaCI CACGTG 1 cut(s) 324
PmlI CACGTG 1 cut(s) 324
PpsI GAGTC 3 cut(s) 669, 771, 982
Ppu21I YACGTR 1 cut(s) 324
PscI ACATGT 1 cut(s) 202
PshAI GACNNNNGTC 1 cut(s) 1461
PsiI TTATAA 1 cut(s) 956
Psp124BI GAGCTC 1 cut(s) 1495
Psp6I CCWGG 3 cut(s) 132, 937, 1423
PspCI CACGTG 1 cut(s) 324
PspEI GGTNACC 1 cut(s) 406
PspGI CCWGG 3 cut(s) 132, 937, 1423
PspN4I GGNNCC 3 cut(s) 73, 733, 854
PspPI GGNCC 2 cut(s) 71, 935
PstI CTGCAG 1 cut(s) 1054
RsaI GTAC 1 cut(s) 1414
RsaNI GTAC 1 cut(s) 1413
RseI CAYNNNNRTG 3 cut(s) 1325, 1361, 1449
SacI GAGCTC 1 cut(s) 1495
SapI GCTCTTC 1 cut(s) 1413
SaqAI TTAA 9 cut(s) 83, 527, 558, 905, 1023, 1071, 1196, 1311, 1344
SatI GCNGC 4 cut(s) 6, 438, 1050, 1281
Sau3AI GATC 4 cut(s) 114, 725, 1042, 1374
Sau96I GGNCC 2 cut(s) 71, 935
SchI GAGTC 3 cut(s) 669, 771, 982
ScrFI CCNGG 3 cut(s) 134, 939, 1425
SduI GDGCHC 1 cut(s) 1495
SfaNI GCATC 3 cut(s) 649, 1252, 1353
SfcI CTRYAG 2 cut(s) 828, 1050
SfoI GGCGCC 1 cut(s) 733
Sfr274I CTCGAG 1 cut(s) 963
SinI GGWCC 2 cut(s) 71, 935
SlaI CTCGAG 1 cut(s) 963
SmiMI CAYNNNNRTG 3 cut(s) 1325, 1361, 1449
SmlI CTYRAG 2 cut(s) 50, 963
SmoI CTYRAG 2 cut(s) 50, 963
SpeI ACTAGT 1 cut(s) 994
SsiI CCGC 4 cut(s) 75, 856, 1354, 1454
SspDI GGCGCC 1 cut(s) 731
SspMI CTAG 4 cut(s) 347, 794, 995, 1551
SstI GAGCTC 1 cut(s) 1495
StyD4I CCNGG 3 cut(s) 132, 937, 1423
StyI CCWWGG 1 cut(s) 781
TaaI ACNGT 3 cut(s) 25, 701, 759
TaiI ACGT 3 cut(s) 326, 888, 1461
TaqI TCGA 2 cut(s) 125, 964
TatI WGTACW 1 cut(s) 1412
TfiI GAWTC 4 cut(s) 458, 505, 512, 575
Tru1I TTAA 9 cut(s) 83, 527, 558, 905, 1023, 1071, 1196, 1311, 1344
Tru9I TTAA 9 cut(s) 83, 527, 558, 905, 1023, 1071, 1196, 1311, 1344
TscAI CASTG 3 cut(s) 30, 1327, 1542
TseFI GTSAC 1 cut(s) 406
TseI GCWGC 4 cut(s) 5, 437, 1049, 1280
Tsp45I GTSAC 1 cut(s) 406
TspDTI ATGAA 8 cut(s) 78, 174, 237, 300, 390, 918, 1074, 1542
TspGWI ACGGA 3 cut(s) 323, 413, 687
TspRI CASTG 3 cut(s) 30, 1327, 1542
Van91I CCANNNNNTGG 2 cut(s) 1304, 1384
VpaK11BI GGWCC 2 cut(s) 71, 935
XapI RAATTY 5 cut(s) 564, 805, 1074, 1314, 1529
XceI RCATGY 2 cut(s) 206, 1236
XcmI CCANNNNNNNNNTGG 1 cut(s) 151
XhoI CTCGAG 1 cut(s) 963
XspI CTAG 4 cut(s) 347, 794, 995, 1551
ZraI GACGTC 1 cut(s) 1459
Zsp2I ATGCAT 1 cut(s) 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.