RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 13 - 189 | 2.5e-58 | TIR domain |
| TIR_2 | PF13676 | 16 - 120 | 2e-15 | TIR domain |
| NB-ARC | PF00931 | 208 - 363 | 8e-13 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 439 - 512 | 2.1e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 747 - 823 | 1.2e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 1028 - 1169 | 3.5e-13 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 971, 2412 |
| Acc16I | TGCGCA | 2 cut(s) | 27, 267 |
| AccBSI | CCGCTC | 1 cut(s) | 1231 |
| AccIII | TCCGGA | 1 cut(s) | 3049 |
| AclI | AACGTT | 1 cut(s) | 391 |
| AclWI | GGATC | 8 cut(s) | 323, 827, 847, 1791, 2946, 3047, 3060, 3307 |
| AcsI | RAATTY | 6 cut(s) | 1170, 1700, 2049, 2358, 2525, 3096 |
| AcuI | CTGAAG | 4 cut(s) | 1064, 1763, 2480, 3186 |
| AdeI | CACNNNGTG | 1 cut(s) | 3346 |
| AfaI | GTAC | 5 cut(s) | 342, 871, 2593, 3059, 3356 |
| AfeI | AGCGCT | 1 cut(s) | 3458 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2760, 2799, 3370, 3427 |
| AflII | CTTAAG | 1 cut(s) | 2426 |
| AflIII | ACRYGT | 1 cut(s) | 337 |
| AjnI | CCWGG | 4 cut(s) | 1543, 1891, 2584, 3342 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 912, 944, 2211, 2243, 2544, 2576 |
| Alw21I | GWGCWC | 3 cut(s) | 411, 1223, 1770 |
| Alw26I | GTCTC | 3 cut(s) | 2348, 2399, 3509 |
| Alw44I | GTGCAC | 1 cut(s) | 1766 |
| AlwI | GGATC | 8 cut(s) | 323, 827, 847, 1791, 2946, 3047, 3060, 3307 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2906 |
| Ama87I | CYCGRG | 1 cut(s) | 587 |
| Aor13HI | TCCGGA | 1 cut(s) | 3049 |
| Aor51HI | AGCGCT | 1 cut(s) | 3458 |
| AoxI | GGCC | 4 cut(s) | 174, 1823, 1924, 3510 |
| ApaLI | GTGCAC | 1 cut(s) | 1766 |
| ApeKI | GCWGC | 7 cut(s) | 365, 368, 1163, 1758, 1969, 2152, 2883 |
| ApoI | RAATTY | 6 cut(s) | 1170, 1700, 2049, 2358, 2525, 3096 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2373, 2405 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 618, 786, 1077, 1617, 1794, 2070, 2223 |
| AspA2I | CCTAGG | 1 cut(s) | 1931 |
| AspLEI | GCGC | 6 cut(s) | 28, 268, 576, 1554, 2829, 3459 |
| AspS9I | GGNCC | 6 cut(s) | 175, 877, 950, 1566, 2199, 3378 |
| AsuC2I | CCSGG | 4 cut(s) | 954, 1571, 2794, 3087 |
| AsuHPI | GGTGA | 8 cut(s) | 944, 1730, 3121, 3257, 3284, 3332, 3385, 3487 |
| AsuII | TTCGAA | 2 cut(s) | 711, 2460 |
| AvaI | CYCGRG | 1 cut(s) | 587 |
| AvaII | GGWCC | 5 cut(s) | 877, 950, 1566, 2199, 3378 |
| AvrII | CCTAGG | 1 cut(s) | 1931 |
| BaeGI | GKGCMC | 1 cut(s) | 1770 |
| BamHI | GGATCC | 1 cut(s) | 3052 |
| BbsI | GAAGAC | 4 cut(s) | 2184, 2643, 2903, 3123 |
| Bbv12I | GWGCWC | 3 cut(s) | 411, 1223, 1770 |
| BbvI | GCAGC | 7 cut(s) | 355, 377, 1150, 1745, 1981, 2139, 2870 |
| BccI | CCATC | 5 cut(s) | 340, 838, 1858, 2786, 2859 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2644, 2678 |
| BciT130I | CCWGG | 4 cut(s) | 1545, 1893, 2586, 3344 |
| BciVI | GTATCC | 1 cut(s) | 1727 |
| BclI | TGATCA | 1 cut(s) | 934 |
| BcnI | CCSGG | 4 cut(s) | 954, 1571, 2794, 3087 |
| BcoDI | GTCTC | 3 cut(s) | 2348, 2399, 3509 |
| BfaI | CTAG | 7 cut(s) | 446, 917, 978, 1932, 2454, 2666, 2861 |
| BfmI | CTRYAG | 3 cut(s) | 834, 2153, 2813 |
| BfoI | RGCGCY | 2 cut(s) | 2830, 3460 |
| BfrI | CTTAAG | 1 cut(s) | 2426 |
| BfuI | GTATCC | 1 cut(s) | 1727 |
| BglII | AGATCT | 2 cut(s) | 1987, 2475 |
| BisI | GCNGC | 8 cut(s) | 105, 366, 369, 1164, 1759, 1970, 2153, 2884 |
| BlnI | CCTAGG | 1 cut(s) | 1931 |
| BlsI | GCNGC | 8 cut(s) | 106, 367, 370, 1165, 1760, 1971, 2154, 2885 |
| Bme1390I | CCNGG | 8 cut(s) | 954, 1545, 1571, 1893, 2586, 2794, 3087, 3344 |
| Bme18I | GGWCC | 5 cut(s) | 877, 950, 1566, 2199, 3378 |
| BmeT110I | CYCGRG | 1 cut(s) | 587 |
| BmgT120I | GGNCC | 6 cut(s) | 175, 877, 950, 1566, 2199, 3378 |
| BmiI | GGNNCC | 8 cut(s) | 1198, 1568, 2200, 2201, 2484, 2521, 2752, 3054 |
| BmrFI | CCNGG | 8 cut(s) | 954, 1545, 1571, 1893, 2586, 2794, 3087, 3344 |
| BpiI | GAAGAC | 4 cut(s) | 2184, 2643, 2903, 3123 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2330, 2362, 2422, 2454, 3367, 3399 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1177, 3507 |
| Bpu14I | TTCGAA | 2 cut(s) | 711, 2460 |
| BpuEI | CTTGAG | 5 cut(s) | 395, 523, 1656, 3386, 3387 |
| BpuMI | CCSGG | 4 cut(s) | 954, 1571, 2794, 3087 |
| Bsa29I | ATCGAT | 1 cut(s) | 1950 |
| BsaBI | GATNNNNATC | 3 cut(s) | 987, 1454, 3140 |
| BsaJI | CCNNGG | 5 cut(s) | 61, 1569, 1931, 2203, 2585 |
| BsaWI | WCCGGW | 2 cut(s) | 3049, 3472 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1353, 1383, 2832, 2862, 3283, 3313 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2760, 2799, 3370, 3427 |
| Bse118I | RCCGGY | 2 cut(s) | 172, 677 |
| Bse1I | ACTGG | 2 cut(s) | 90, 2729 |
| Bse8I | GATNNNNATC | 3 cut(s) | 987, 1454, 3140 |
| BseAI | TCCGGA | 1 cut(s) | 3049 |
| BseBI | CCWGG | 4 cut(s) | 1545, 1893, 2586, 3344 |
| BseCI | ATCGAT | 1 cut(s) | 1950 |
| BseDI | CCNNGG | 5 cut(s) | 61, 1569, 1931, 2203, 2585 |
| BseJI | GATNNNNATC | 3 cut(s) | 987, 1454, 3140 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2760, 2799, 3370, 3427 |
| BseNI | ACTGG | 2 cut(s) | 90, 2729 |
| BseRI | GAGGAG | 3 cut(s) | 9, 171, 1659 |
| BseSI | GKGCMC | 1 cut(s) | 1770 |
| BseXI | GCAGC | 7 cut(s) | 355, 377, 1150, 1745, 1981, 2139, 2870 |
| BseYI | CCCAGC | 1 cut(s) | 1728 |
| BsgI | GTGCAG | 3 cut(s) | 134, 2665, 2904 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2100 |
| BshFI | GGCC | 4 cut(s) | 176, 1825, 1926, 3512 |
| BshVI | ATCGAT | 1 cut(s) | 1950 |
| BsiEI | CGRYCG | 1 cut(s) | 2100 |
| BsiHKAI | GWGCWC | 3 cut(s) | 411, 1223, 1770 |
| BsiHKCI | CYCGRG | 1 cut(s) | 587 |
| BsiSI | CCGG | 8 cut(s) | 173, 678, 953, 1571, 2794, 3050, 3086, 3473 |
| BsiWI | CGTACG | 1 cut(s) | 869 |
| BslFI | GGGAC | 5 cut(s) | 309, 1621, 2185, 2320, 2594 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 67, 352, 836, 858, 874, 2760, 2799, 3370, 3427 |
| BsmAI | GTCTC | 3 cut(s) | 2348, 2399, 3509 |
| BsmFI | GGGAC | 5 cut(s) | 309, 1621, 2185, 2320, 2594 |
| BsmI | GAATGC | 3 cut(s) | 284, 539, 3001 |
| BsnI | GGCC | 4 cut(s) | 176, 1825, 1926, 3512 |
| BsoBI | CYCGRG | 1 cut(s) | 587 |
| Bsp119I | TTCGAA | 2 cut(s) | 711, 2460 |
| Bsp1286I | GDGCHC | 3 cut(s) | 411, 1223, 1770 |
| Bsp13I | TCCGGA | 1 cut(s) | 3049 |
| Bsp1407I | TGTACA | 1 cut(s) | 2591 |
| Bsp19I | CCATGG | 1 cut(s) | 2203 |
| BspANI | GGCC | 4 cut(s) | 176, 1825, 1926, 3512 |
| BspDI | ATCGAT | 1 cut(s) | 1950 |
| BspEI | TCCGGA | 1 cut(s) | 3049 |
| BspHI | TCATGA | 1 cut(s) | 1066 |
| BspLI | GGNNCC | 8 cut(s) | 1198, 1568, 2200, 2201, 2484, 2521, 2752, 3054 |
| BspMAI | CTGCAG | 1 cut(s) | 2157 |
| BspPI | GGATC | 8 cut(s) | 323, 827, 847, 1791, 2946, 3047, 3060, 3307 |
| BspQI | GCTCTTC | 1 cut(s) | 1091 |
| BspT104I | TTCGAA | 2 cut(s) | 711, 2460 |
| BspTI | CTTAAG | 1 cut(s) | 2426 |
| BsrBI | CCGCTC | 1 cut(s) | 1231 |
| BsrFI | RCCGGY | 2 cut(s) | 172, 677 |
| BsrGI | TGTACA | 1 cut(s) | 2591 |
| BsrI | ACTGG | 2 cut(s) | 90, 2729 |
| BssAI | RCCGGY | 2 cut(s) | 172, 677 |
| BssECI | CCNNGG | 5 cut(s) | 61, 1569, 1931, 2203, 2585 |
| BssT1I | CCWWGG | 2 cut(s) | 1931, 2203 |
| Bst2UI | CCWGG | 4 cut(s) | 1545, 1893, 2586, 3344 |
| Bst4CI | ACNGT | 4 cut(s) | 634, 770, 1150, 2902 |
| Bst6I | CTCTTC | 1 cut(s) | 1091 |
| BstAFI | CTTAAG | 1 cut(s) | 2426 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1012 |
| BstAUI | TGTACA | 1 cut(s) | 2591 |
| BstBI | TTCGAA | 2 cut(s) | 711, 2460 |
| BstC8I | GCNNGC | 6 cut(s) | 30, 1823, 1827, 1928, 2825, 3449 |
| BstDSI | CCRYGG | 1 cut(s) | 2203 |
| BstH2I | RGCGCY | 2 cut(s) | 2830, 3460 |
| BstHHI | GCGC | 6 cut(s) | 28, 268, 576, 1554, 2829, 3459 |
| BstMAI | GTCTC | 3 cut(s) | 2348, 2399, 3509 |
| BstMCI | CGRYCG | 1 cut(s) | 2100 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 580, 1012, 1549, 1558, 1888, 3404 |
| BstNI | CCWGG | 4 cut(s) | 1545, 1893, 2586, 3344 |
| BstNSI | RCATGY | 4 cut(s) | 32, 341, 1350, 1401 |
| BstSCI | CCNGG | 8 cut(s) | 952, 1543, 1569, 1891, 2584, 2792, 3085, 3342 |
| BstSFI | CTRYAG | 3 cut(s) | 834, 2153, 2813 |
| BstSLI | GKGCMC | 1 cut(s) | 1770 |
| BstV1I | GCAGC | 7 cut(s) | 355, 377, 1150, 1745, 1981, 2139, 2870 |
| BstV2I | GAAGAC | 4 cut(s) | 2184, 2643, 2903, 3123 |
| BstX2I | RGATCY | 5 cut(s) | 328, 1783, 1987, 2475, 3052 |
| BstYI | RGATCY | 5 cut(s) | 328, 1783, 1987, 2475, 3052 |
| Bsu15I | ATCGAT | 1 cut(s) | 1950 |
| BsuI | GTATCC | 1 cut(s) | 1727 |
| BsuRI | GGCC | 4 cut(s) | 176, 1825, 1926, 3512 |
| BsuTUI | ATCGAT | 1 cut(s) | 1950 |
| BtgI | CCRYGG | 1 cut(s) | 2203 |
| BtgZI | GCGATG | 1 cut(s) | 1327 |
| BtsIMutI | CAGTG | 2 cut(s) | 630, 2907 |
| Cac8I | GCNNGC | 6 cut(s) | 30, 1823, 1827, 1928, 2825, 3449 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2906 |
| CciI | TCATGA | 1 cut(s) | 1066 |
| CfoI | GCGC | 6 cut(s) | 28, 268, 576, 1554, 2829, 3459 |
| Cfr10I | RCCGGY | 2 cut(s) | 172, 677 |
| Cfr13I | GGNCC | 6 cut(s) | 175, 877, 950, 1566, 2199, 3378 |
| ClaI | ATCGAT | 1 cut(s) | 1950 |
| CsiI | ACCWGGT | 1 cut(s) | 3342 |
| Csp6I | GTAC | 5 cut(s) | 341, 870, 2592, 3058, 3355 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2530, 2565 |
| CviQI | GTAC | 5 cut(s) | 341, 870, 2592, 3058, 3355 |
| DraI | TTTAAA | 2 cut(s) | 549, 2530 |
| DraIII | CACNNNGTG | 1 cut(s) | 3346 |
| Eam1104I | CTCTTC | 1 cut(s) | 1091 |
| EarI | CTCTTC | 1 cut(s) | 1091 |
| EciI | GGCGGA | 2 cut(s) | 1486, 2581 |
| Eco130I | CCWWGG | 2 cut(s) | 1931, 2203 |
| Eco32I | GATATC | 2 cut(s) | 1452, 3142 |
| Eco47I | GGWCC | 5 cut(s) | 877, 950, 1566, 2199, 3378 |
| Eco47III | AGCGCT | 1 cut(s) | 3458 |
| Eco57I | CTGAAG | 4 cut(s) | 1064, 1763, 2480, 3186 |
| Eco88I | CYCGRG | 1 cut(s) | 587 |
| EcoO109I | RGGNCCY | 2 cut(s) | 877, 2199 |
| EcoRI | GAATTC | 1 cut(s) | 1170 |
| EcoRII | CCWGG | 4 cut(s) | 1543, 1891, 2584, 3342 |
| EcoRV | GATATC | 2 cut(s) | 1452, 3142 |
| EcoT14I | CCWWGG | 2 cut(s) | 1931, 2203 |
| EcoT22I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1494 |
| ErhI | CCWWGG | 2 cut(s) | 1931, 2203 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1646, 1678 |
| FaqI | GGGAC | 5 cut(s) | 309, 1621, 2185, 2320, 2594 |
| FauI | CCCGC | 4 cut(s) | 83, 1159, 1224, 2225 |
| FbaI | TGATCA | 1 cut(s) | 934 |
| Fnu4HI | GCNGC | 8 cut(s) | 105, 366, 369, 1164, 1759, 1970, 2153, 2884 |
| Fsp4HI | GCNGC | 8 cut(s) | 105, 366, 369, 1164, 1759, 1970, 2153, 2884 |
| FspBI | CTAG | 7 cut(s) | 446, 917, 978, 1932, 2454, 2666, 2861 |
| FspI | TGCGCA | 2 cut(s) | 27, 267 |
| GlaI | GCGC | 6 cut(s) | 27, 267, 575, 1553, 2828, 3458 |
| GluI | GCNGC | 8 cut(s) | 105, 366, 369, 1164, 1759, 1970, 2153, 2884 |
| GsaI | CCCAGC | 1 cut(s) | 1732 |
| HaeII | RGCGCY | 2 cut(s) | 2830, 3460 |
| HaeIII | GGCC | 4 cut(s) | 176, 1825, 1926, 3512 |
| HapII | CCGG | 8 cut(s) | 173, 678, 953, 1571, 2794, 3050, 3086, 3473 |
| HhaI | GCGC | 6 cut(s) | 28, 268, 576, 1554, 2829, 3459 |
| Hin6I | GCGC | 6 cut(s) | 26, 266, 574, 1552, 2827, 3457 |
| HinP1I | GCGC | 6 cut(s) | 26, 266, 574, 1552, 2827, 3457 |
| HincII | GTYRAC | 1 cut(s) | 3208 |
| HindII | GTYRAC | 1 cut(s) | 3208 |
| HindIII | AAGCTT | 5 cut(s) | 203, 714, 2078, 2596, 3146 |
| HpaII | CCGG | 8 cut(s) | 173, 678, 953, 1571, 2794, 3050, 3086, 3473 |
| HphI | GGTGA | 8 cut(s) | 944, 1730, 3121, 3257, 3284, 3332, 3385, 3487 |
| Hpy99I | CGWCG | 1 cut(s) | 1212 |
| HpyCH4III | ACNGT | 4 cut(s) | 634, 770, 1150, 2902 |
| HpyCH4IV | ACGT | 2 cut(s) | 391, 2556 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 580, 1012, 1549, 1558, 1888, 3404 |
| HpySE526I | ACGT | 2 cut(s) | 391, 2556 |
| HspAI | GCGC | 6 cut(s) | 26, 266, 574, 1552, 2827, 3457 |
| KflI | GGGWCCC | 1 cut(s) | 2199 |
| Kpn2I | TCCGGA | 1 cut(s) | 3049 |
| Ksp22I | TGATCA | 1 cut(s) | 934 |
| LguI | GCTCTTC | 1 cut(s) | 1091 |
| LmnI | GCTCC | 6 cut(s) | 1022, 1121, 2482, 2763, 2853, 3291 |
| Lsp1109I | GCAGC | 7 cut(s) | 355, 377, 1150, 1745, 1981, 2139, 2870 |
| MabI | ACCWGGT | 1 cut(s) | 3342 |
| MaeI | CTAG | 7 cut(s) | 446, 917, 978, 1932, 2454, 2666, 2861 |
| MaeII | ACGT | 2 cut(s) | 391, 2556 |
| MaeIII | GTNAC | 5 cut(s) | 222, 1478, 2580, 2675, 2972 |
| MbiI | CCGCTC | 1 cut(s) | 1231 |
| MfeI | CAATTG | 3 cut(s) | 1388, 1521, 2193 |
| MflI | RGATCY | 5 cut(s) | 328, 1783, 1987, 2475, 3052 |
| MhlI | GDGCHC | 3 cut(s) | 411, 1223, 1770 |
| MlyI | GAGTC | 6 cut(s) | 535, 599, 690, 1660, 2612, 2668 |
| MmeI | TCCRAC | 3 cut(s) | 541, 1572, 1730 |
| Mph1103I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1494 |
| MroI | TCCGGA | 1 cut(s) | 3049 |
| MroXI | GAANNNNTTC | 7 cut(s) | 618, 786, 1077, 1617, 1794, 2070, 2223 |
| MseI | TTAA | 9 cut(s) | 36, 548, 1185, 1773, 1940, 2247, 2295, 2427, 2529 |
| MslI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 3420, 3441 |
| MspA1I | CMGCKG | 3 cut(s) | 368, 1821, 1972 |
| MspCI | CTTAAG | 1 cut(s) | 2426 |
| MspI | CCGG | 8 cut(s) | 173, 678, 953, 1571, 2794, 3050, 3086, 3473 |
| MspR9I | CCNGG | 8 cut(s) | 954, 1545, 1571, 1893, 2586, 2794, 3087, 3344 |
| MunI | CAATTG | 3 cut(s) | 1388, 1521, 2193 |
| Mva1269I | GAATGC | 3 cut(s) | 284, 539, 3001 |
| MvaI | CCWGG | 4 cut(s) | 1545, 1893, 2586, 3344 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 580, 1012, 1549, 1558, 1888, 3404 |
| NciI | CCSGG | 4 cut(s) | 954, 1571, 2794, 3087 |
| NcoI | CCATGG | 1 cut(s) | 2203 |
| NlaIV | GGNNCC | 8 cut(s) | 1198, 1568, 2200, 2201, 2484, 2521, 2752, 3054 |
| NmeAIII | GCCGAG | 1 cut(s) | 3538 |
| NmuCI | GTSAC | 2 cut(s) | 222, 2675 |
| NsbI | TGCGCA | 2 cut(s) | 27, 267 |
| NsiI | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1494 |
| NspI | RCATGY | 4 cut(s) | 32, 341, 1350, 1401 |
| NspV | TTCGAA | 2 cut(s) | 711, 2460 |
| PaeI | GCATGC | 1 cut(s) | 32 |
| PaeR7I | CTCGAG | 1 cut(s) | 587 |
| PagI | TCATGA | 1 cut(s) | 1066 |
| PciI | ACATGT | 1 cut(s) | 337 |
| PciSI | GCTCTTC | 1 cut(s) | 1091 |
| PctI | GAATGC | 3 cut(s) | 284, 539, 3001 |
| PdmI | GAANNNNTTC | 7 cut(s) | 618, 786, 1077, 1617, 1794, 2070, 2223 |
| Pfl23II | CGTACG | 1 cut(s) | 869 |
| PflFI | GACNNNGTC | 1 cut(s) | 2902 |
| PfoI | TCCNGGA | 1 cut(s) | 3085 |
| PkrI | GCNGC | 8 cut(s) | 106, 367, 370, 1165, 1760, 1971, 2154, 2885 |
| PleI | GAGTC | 6 cut(s) | 534, 598, 690, 1660, 2611, 2667 |
| PpsI | GAGTC | 6 cut(s) | 534, 598, 690, 1660, 2611, 2667 |
| PpuMI | RGGWCCY | 2 cut(s) | 877, 2199 |
| PscI | ACATGT | 1 cut(s) | 337 |
| PsiI | TTATAA | 2 cut(s) | 971, 2412 |
| Psp1406I | AACGTT | 1 cut(s) | 391 |
| Psp5II | RGGWCCY | 2 cut(s) | 877, 2199 |
| Psp6I | CCWGG | 4 cut(s) | 1543, 1891, 2584, 3342 |
| PspFI | CCCAGC | 1 cut(s) | 1728 |
| PspGI | CCWGG | 4 cut(s) | 1543, 1891, 2584, 3342 |
| PspLI | CGTACG | 1 cut(s) | 869 |
| PspN4I | GGNNCC | 8 cut(s) | 1198, 1568, 2200, 2201, 2484, 2521, 2752, 3054 |
| PspPI | GGNCC | 6 cut(s) | 175, 877, 950, 1566, 2199, 3378 |
| PspPPI | RGGWCCY | 2 cut(s) | 877, 2199 |
| PspXI | VCTCGAGB | 1 cut(s) | 587 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 603, 635 |
| PstI | CTGCAG | 1 cut(s) | 2157 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2906 |
| PsuI | RGATCY | 5 cut(s) | 328, 1783, 1987, 2475, 3052 |
| PsyI | GACNNNGTC | 1 cut(s) | 2902 |
| PvuII | CAGCTG | 3 cut(s) | 368, 1821, 1972 |
| RsaI | GTAC | 5 cut(s) | 342, 871, 2593, 3059, 3356 |
| RsaNI | GTAC | 5 cut(s) | 341, 870, 2592, 3058, 3355 |
| RseI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 3420, 3441 |
| SapI | GCTCTTC | 1 cut(s) | 1091 |
| SaqAI | TTAA | 9 cut(s) | 36, 548, 1185, 1773, 1940, 2247, 2295, 2427, 2529 |
| SatI | GCNGC | 8 cut(s) | 105, 366, 369, 1164, 1759, 1970, 2153, 2884 |
| Sau96I | GGNCC | 6 cut(s) | 175, 877, 950, 1566, 2199, 3378 |
| SchI | GAGTC | 6 cut(s) | 535, 599, 690, 1660, 2612, 2668 |
| ScrFI | CCNGG | 8 cut(s) | 954, 1545, 1571, 1893, 2586, 2794, 3087, 3344 |
| SduI | GDGCHC | 3 cut(s) | 411, 1223, 1770 |
| SexAI | ACCWGGT | 1 cut(s) | 3342 |
| SfcI | CTRYAG | 3 cut(s) | 834, 2153, 2813 |
| Sfr274I | CTCGAG | 1 cut(s) | 587 |
| SfuI | TTCGAA | 2 cut(s) | 711, 2460 |
| SinI | GGWCC | 5 cut(s) | 877, 950, 1566, 2199, 3378 |
| SlaI | CTCGAG | 1 cut(s) | 587 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 99, 598, 1095, 1439, 3420, 3441 |
| SmlI | CTYRAG | 7 cut(s) | 410, 538, 587, 1671, 2426, 3365, 3402 |
| SmoI | CTYRAG | 7 cut(s) | 410, 538, 587, 1671, 2426, 3365, 3402 |
| SphI | GCATGC | 1 cut(s) | 32 |
| SspI | AATATT | 1 cut(s) | 1844 |
| SspMI | CTAG | 7 cut(s) | 446, 917, 978, 1932, 2454, 2666, 2861 |
| StyD4I | CCNGG | 8 cut(s) | 952, 1543, 1569, 1891, 2584, 2792, 3085, 3342 |
| StyI | CCWWGG | 2 cut(s) | 1931, 2203 |
| TaaI | ACNGT | 4 cut(s) | 634, 770, 1150, 2902 |
| TaiI | ACGT | 2 cut(s) | 394, 2559 |
| TaqII | GACCGA | 2 cut(s) | 2114, 2626 |
| TatI | WGTACW | 1 cut(s) | 2591 |
| TauI | GCSGC | 1 cut(s) | 107 |
| Tru1I | TTAA | 9 cut(s) | 36, 548, 1185, 1773, 1940, 2247, 2295, 2427, 2529 |
| Tru9I | TTAA | 9 cut(s) | 36, 548, 1185, 1773, 1940, 2247, 2295, 2427, 2529 |
| TscAI | CASTG | 2 cut(s) | 637, 2907 |
| TseFI | GTSAC | 2 cut(s) | 222, 2675 |
| TseI | GCWGC | 7 cut(s) | 365, 368, 1163, 1758, 1969, 2152, 2883 |
| Tsp45I | GTSAC | 2 cut(s) | 222, 2675 |
| TspGWI | ACGGA | 5 cut(s) | 478, 2619, 2663, 3045, 3305 |
| TspRI | CASTG | 2 cut(s) | 637, 2907 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2902 |
| Vha464I | CTTAAG | 1 cut(s) | 2426 |
| VneI | GTGCAC | 1 cut(s) | 1766 |
| VpaK11BI | GGWCC | 5 cut(s) | 877, 950, 1566, 2199, 3378 |
| XapI | RAATTY | 6 cut(s) | 1170, 1700, 2049, 2358, 2525, 3096 |
| XceI | RCATGY | 4 cut(s) | 32, 341, 1350, 1401 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2265, 3428 |
| XhoI | CTCGAG | 1 cut(s) | 587 |
| XmaJI | CCTAGG | 1 cut(s) | 1931 |
| XmnI | GAANNNNTTC | 7 cut(s) | 618, 786, 1077, 1617, 1794, 2070, 2223 |
| XspI | CTAG | 7 cut(s) | 446, 917, 978, 1932, 2454, 2666, 2861 |
| Zsp2I | ATGCAT | 5 cut(s) | 605, 990, 1309, 1399, 1494 |