Rorug02G0634800
NBS-LRR Family

Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
74864448 .. 74868315
3868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0634800.1

Sequence Viewer

Length: 1383 bp
ATGCCGAGCGTAGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTCCTCTTGAAGCACCGTCTCCAGAACCGGATCCAAACCCGACCCGACGAGTTCGACCCCTTCGGCGTCACCTCCCGACCCGAAGAAACCATCGCCGCCGCCAATCCCTTATTCGACGACGGCGTCGCCACCAAGGACATCCACATCGATCCTTTTACTTCTCTATCTATTCGAATCTTCCTCCCCGAGTCCGCTCTCAACCCGCCGGAGCCCTCCGGTAAATCTAGGGCTAGACGGCCCGATCTCAATTCTCCGGCCGATTCCGCCCGGCCGAGTCCGAACGGCTCGCCGTTCCATCCTTCCCGCCGCAGCAGCTACGGCAACGCGGCGGTGGCGAATACGTTGAGGGCGGAGCCCAGGAGGAACAGCTACGGCTTCAGCAACGACGTCGAGGGGTTGAATTTGATGGCCGGAGTCGGCTCCGGAGTGTACAGAGGGTACTCGCCGGCGAATTCGGCCAAGAAGAGTCGGAAATTGCCGGTGATTTTGCAGTTTCACGGCGGTGGTTGGGTCAGTGGGAGCAATGACTCGGTGGCCAACGACTGTTTCTGTCGCCGGATTGCGAAATTGTGCGACGTCATCGTTTTGGCCGTCGGGTACAGGCTTGCGCCGGAGAATAAGTACCCGGCGGCGTTTGAAGACGGTTTGAAGGTGTTGAATTGGTTGGGGAAGCAGGCCAATTTGGCCAATTTGTCCATGGGCGGCGCCACCGAGTTGAAGAAGACTGATAATCGGCATATTGTGGACACTTTCGGGGCGTCAATGGTTGAGCCGTGGTTGGCTGCCCATGGAGATCCATCAAGATGTGTTCTCCTTGGGGTGAGCTGTGGTGCAAACATTGCAGACTATGTGGCTCGGAAAGCTGTAGAGGCAGGCAAGCTTCTGGAGCCTGTAAAGGTGGTTGCACAGGTCCTTATGTATCCGTTCTTCGTTGGCAGTGTTCCCACACATTCTGAAATAAAATTGGCAAATTCGTATTTCTATGACAAGGCAATGTGCATGCTAGCTTGGAAATTATTCTTACCCGAGGAAGAGTTTAGCTTGGACCATCCAGCTGCCAATCCTCTCATTCCAGACAGGCAACCGCCTTTAAAGCTCATGCCTCCAACCCTTACAGTGGTGGCAGAACATGATTGGATGAGAGACCGTGCCATTGCTTACTCAGAGGAGCTTCGGAAGGTAAATGTTGATGCACCCGTAATGGAGTATAAAGATGCAGTTCATGAATTTGCAACCCTTGATATGCTTCTCAAGACCCCTCAGGCACAGGCCTGTGCAGAGGACATTGCCATCTGGGTAAAGAAATACATCTCACTTCGAGGTCACGAGTTCTCGTATTAA

Protein Analysis

460

Amino Acids

50.76

Weight (kDa)

8.33

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 161 - 217 4.5e-06 Carboxylesterase family
BD-FAE PF20434 167 - 241 1.1e-08 BD-FAE
Abhydrolase_3 PF07859 176 - 425 1.1e-56 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 164
AatII GACGTC 2 cut(s) 432, 621
AccB1I GGYRCC 1 cut(s) 746
AccBSI CCGCTC 1 cut(s) 236
AccII CGCG 1 cut(s) 368
AccIII TCCGGA 1 cut(s) 464
AclWI GGATC 4 cut(s) 67, 80, 185, 830
AcoI YGGCCR 7 cut(s) 297, 311, 450, 498, 576, 630, 726
AcsI RAATTY 4 cut(s) 442, 493, 1012, 1268
AcuI CTGAAG 1 cut(s) 403
AcyI GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
AfaI GTAC 4 cut(s) 473, 482, 641, 665
AfiI CCNNNNNNNGG 1 cut(s) 1159
AgsI TTSAA 7 cut(s) 40, 52, 442, 680, 691, 700, 760
AjnI CCWGG 1 cut(s) 398
AjuI GAANNNNNNNTTGG 4 cut(s) 137, 169, 572, 604
AleI CACNNNNGTG 1 cut(s) 543
Alw26I GTCTC 2 cut(s) 65, 1179
AlwI GGATC 4 cut(s) 67, 80, 185, 830
Ama87I CYCGRG 2 cut(s) 227, 1067
Aor13HI TCCGGA 1 cut(s) 464
ApeKI GCWGC 4 cut(s) 351, 354, 824, 1097
ApoI RAATTY 4 cut(s) 442, 493, 1012, 1268
Asp700I GAANNNNTTC 1 cut(s) 1058
AspLEI GCGC 2 cut(s) 652, 749
AspS9I GGNCC 3 cut(s) 279, 952, 1087
AsuC2I CCSGG 2 cut(s) 310, 668
AsuHPI GGTGA 3 cut(s) 103, 535, 874
AsuII TTCGAA 1 cut(s) 214
AsuNHI GCTAGC 1 cut(s) 1045
AvaI CYCGRG 2 cut(s) 227, 1067
AvaII GGWCC 2 cut(s) 952, 1087
AxyI CCTNAGG 1 cut(s) 1302
BalI TGGCCA 2 cut(s) 578, 728
BamHI GGATCC 1 cut(s) 72
BanI GGYRCC 1 cut(s) 746
BanII GRGCYC 2 cut(s) 255, 399
BarI GAAGNNNNNNTAC 2 cut(s) 953, 985
BauI CACGAG 1 cut(s) 1367
BbsI GAAGAC 3 cut(s) 25, 687, 770
BbvI GCAGC 4 cut(s) 363, 366, 811, 1084
BccI CCATC 6 cut(s) 140, 345, 442, 847, 1098, 1340
BceAI ACGGC 9 cut(s) 178, 293, 316, 340, 376, 430, 556, 617, 799
BcgI CGANNNNNNTGC 2 cut(s) 412, 446
BciT130I CCWGG 1 cut(s) 400
BciVI GTATCC 1 cut(s) 972
BcnI CCSGG 2 cut(s) 310, 668
BcoDI GTCTC 2 cut(s) 65, 1179
BfaI CTAG 3 cut(s) 267, 273, 1046
BfmI CTRYAG 2 cut(s) 25, 906
BfoI RGCGCY 1 cut(s) 750
BfuI GTATCC 1 cut(s) 972
BglI GCCNNNNNGGC 1 cut(s) 725
Bme1390I CCNGG 3 cut(s) 310, 400, 668
Bme18I GGWCC 2 cut(s) 952, 1087
BmeT110I CYCGRG 2 cut(s) 227, 1067
BmgT120I GGNCC 3 cut(s) 279, 952, 1087
BmiI GGNNCC 6 cut(s) 74, 252, 396, 463, 748, 930
BmrFI CCNGG 3 cut(s) 310, 400, 668
BmsI GCATC 2 cut(s) 1222, 1246
BmtI GCTAGC 1 cut(s) 1049
BpiI GAAGAC 3 cut(s) 25, 687, 770
BpmI CTGGAG 2 cut(s) 47, 947
Bpu14I TTCGAA 1 cut(s) 214
BpuEI CTTGAG 1 cut(s) 1277
BpuMI CCSGG 2 cut(s) 310, 668
Bsa29I ATCGAT 1 cut(s) 189
BsaHI GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
BsaI GGTCTC 1 cut(s) 1179
BsaJI CCNNGG 7 cut(s) 174, 398, 738, 815, 829, 856, 1068
BsaWI WCCGGW 3 cut(s) 69, 257, 464
BsaXI ACNNNNNCTCC 2 cut(s) 647, 677
Bsc4I CCNNNNNNNGG 1 cut(s) 1159
Bse118I RCCGGY 2 cut(s) 487, 520
Bse21I CCTNAGG 1 cut(s) 1302
Bse3DI GCAATG 5 cut(s) 571, 879, 1041, 1194, 1326
BseAI TCCGGA 1 cut(s) 464
BseBI CCWGG 1 cut(s) 400
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 7 cut(s) 174, 398, 738, 815, 829, 856, 1068
BseGI GGATG 4 cut(s) 180, 337, 1090, 1185
BseLI CCNNNNNNNGG 1 cut(s) 1159
BseMI GCAATG 5 cut(s) 571, 879, 1041, 1194, 1326
BseMII CTCAG 2 cut(s) 1218, 1316
BseRI GAGGAG 1 cut(s) 1223
BseX3I CGGCCG 2 cut(s) 297, 311
BseXI GCAGC 4 cut(s) 363, 366, 811, 1084
BsgI GTGCAG 1 cut(s) 1338
Bsh1236I CGCG 1 cut(s) 368
Bsh1285I CGRYCG 2 cut(s) 300, 314
BshNI GGYRCC 1 cut(s) 746
BshVI ATCGAT 1 cut(s) 189
BsiEI CGRYCG 2 cut(s) 300, 314
BsiHKCI CYCGRG 2 cut(s) 227, 1067
BslI CCNNNNNNNGG 1 cut(s) 1159
BsmAI GTCTC 2 cut(s) 65, 1179
BsmBI CGTCTC 1 cut(s) 65
Bso31I GGTCTC 1 cut(s) 1179
BsoBI CYCGRG 2 cut(s) 227, 1067
Bsp119I TTCGAA 1 cut(s) 214
Bsp1286I GDGCHC 2 cut(s) 255, 399
Bsp13I TCCGGA 1 cut(s) 464
Bsp1407I TGTACA 1 cut(s) 471
Bsp143I GATC 4 cut(s) 72, 190, 283, 835
Bsp19I CCATGG 2 cut(s) 738, 829
BspCNI CTCAG 2 cut(s) 1217, 1315
BspDI ATCGAT 1 cut(s) 189
BspEI TCCGGA 1 cut(s) 464
BspFNI CGCG 1 cut(s) 368
BspHI TCATGA 1 cut(s) 1264
BspLI GGNNCC 6 cut(s) 74, 252, 396, 463, 748, 930
BspOI GCTAGC 1 cut(s) 1049
BspPI GGATC 4 cut(s) 67, 80, 185, 830
BspT104I TTCGAA 1 cut(s) 214
BspT107I GGYRCC 1 cut(s) 746
BspTNI GGTCTC 1 cut(s) 1179
BsrBI CCGCTC 1 cut(s) 236
BsrDI GCAATG 5 cut(s) 571, 879, 1041, 1194, 1326
BsrFI RCCGGY 2 cut(s) 487, 520
BsrGI TGTACA 1 cut(s) 471
BssAI RCCGGY 2 cut(s) 487, 520
BssECI CCNNGG 7 cut(s) 174, 398, 738, 815, 829, 856, 1068
BssMI GATC 4 cut(s) 72, 190, 283, 835
BssNI GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
BssSI CACGAG 1 cut(s) 1367
BssT1I CCWWGG 4 cut(s) 174, 738, 829, 856
Bst2BI CACGAG 1 cut(s) 1367
Bst2UI CCWGG 1 cut(s) 400
Bst4CI ACNGT 5 cut(s) 59, 587, 686, 1159, 1190
Bst6I CTCTTC 2 cut(s) 500, 1068
BstACI GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
BstAPI GCANNNNNTGC 1 cut(s) 881
BstAUI TGTACA 1 cut(s) 471
BstBI TTCGAA 1 cut(s) 214
BstC8I GCNNGC 8 cut(s) 329, 489, 648, 717, 916, 920, 1043, 1047
BstDEI CTNAG 2 cut(s) 1204, 1302
BstDSI CCRYGG 3 cut(s) 738, 815, 829
BstF5I GGATG 4 cut(s) 180, 337, 1090, 1185
BstFNI CGCG 1 cut(s) 368
BstH2I RGCGCY 1 cut(s) 750
BstHHI GCGC 2 cut(s) 652, 749
BstKTI GATC 4 cut(s) 75, 193, 286, 838
BstMAI GTCTC 2 cut(s) 65, 1179
BstMBI GATC 4 cut(s) 72, 190, 283, 835
BstMCI CGRYCG 2 cut(s) 300, 314
BstNI CCWGG 1 cut(s) 400
BstNSI RCATGY 1 cut(s) 1045
BstSCI CCNGG 3 cut(s) 308, 398, 666
BstSFI CTRYAG 2 cut(s) 25, 906
BstUI CGCG 1 cut(s) 368
BstV1I GCAGC 4 cut(s) 363, 366, 811, 1084
BstV2I GAAGAC 3 cut(s) 25, 687, 770
BstX2I RGATCY 2 cut(s) 72, 835
BstYI RGATCY 2 cut(s) 72, 835
BstZI CGGCCG 2 cut(s) 297, 311
Bsu15I ATCGAT 1 cut(s) 189
Bsu36I CCTNAGG 1 cut(s) 1302
BsuI GTATCC 1 cut(s) 972
BsuTUI ATCGAT 1 cut(s) 189
BtgI CCRYGG 3 cut(s) 738, 815, 829
BtgZI GCGATG 1 cut(s) 118
BtsCI GGATG 4 cut(s) 180, 337, 1090, 1185
BtsI GCAGTG 1 cut(s) 985
BtsIMutI CAGTG 3 cut(s) 562, 985, 1164
Cac8I GCNNGC 8 cut(s) 329, 489, 648, 717, 916, 920, 1043, 1047
CciI TCATGA 1 cut(s) 1264
CfoI GCGC 2 cut(s) 652, 749
Cfr10I RCCGGY 2 cut(s) 487, 520
Cfr13I GGNCC 3 cut(s) 279, 952, 1087
ClaI ATCGAT 1 cut(s) 189
CseI GACGC 4 cut(s) 19, 97, 154, 789
Csp6I GTAC 4 cut(s) 472, 481, 640, 664
CviAII CATG 6 cut(s) 739, 830, 1042, 1141, 1172, 1265
CviQI GTAC 4 cut(s) 472, 481, 640, 664
DdeI CTNAG 2 cut(s) 1204, 1302
DinI GGCGCC 1 cut(s) 748
DpnI GATC 4 cut(s) 74, 192, 285, 837
DpnII GATC 4 cut(s) 72, 190, 283, 835
DraI TTTAAA 1 cut(s) 1134
DrdI GACNNNNNNGTC 1 cut(s) 164
DseDI GACNNNNNNGTC 1 cut(s) 164
EaeI YGGCCR 7 cut(s) 297, 311, 450, 498, 576, 630, 726
EagI CGGCCG 2 cut(s) 297, 311
Eam1104I CTCTTC 2 cut(s) 500, 1068
EarI CTCTTC 2 cut(s) 500, 1068
EciI GGCGGA 2 cut(s) 295, 407
EclXI CGGCCG 2 cut(s) 297, 311
Eco130I CCWWGG 4 cut(s) 174, 738, 829, 856
Eco147I AGGCCT 1 cut(s) 1313
Eco24I GRGCYC 2 cut(s) 255, 399
Eco31I GGTCTC 1 cut(s) 1179
Eco47I GGWCC 2 cut(s) 952, 1087
Eco52I CGGCCG 2 cut(s) 297, 311
Eco57I CTGAAG 1 cut(s) 403
Eco81I CCTNAGG 1 cut(s) 1302
Eco88I CYCGRG 2 cut(s) 227, 1067
EcoO109I RGGNCCY 1 cut(s) 952
EcoRI GAATTC 1 cut(s) 493
EcoRII CCWGG 1 cut(s) 398
EcoT14I CCWWGG 4 cut(s) 174, 738, 829, 856
EcoT38I GRGCYC 2 cut(s) 255, 399
EgeI GGCGCC 1 cut(s) 748
EheI GGCGCC 1 cut(s) 748
ErhI CCWWGG 4 cut(s) 174, 738, 829, 856
Esp3I CGTCTC 1 cut(s) 65
FaeI CATG 6 cut(s) 742, 833, 1045, 1144, 1175, 1268
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FatI CATG 6 cut(s) 738, 829, 1041, 1140, 1171, 1264
FauI CCCGC 2 cut(s) 252, 353
FokI GGATG 4 cut(s) 167, 324, 1077, 1192
FriOI GRGCYC 2 cut(s) 255, 399
FspBI CTAG 3 cut(s) 267, 273, 1046
GlaI GCGC 2 cut(s) 651, 748
GsuI CTGGAG 2 cut(s) 47, 947
HaeII RGCGCY 1 cut(s) 750
HgaI GACGC 4 cut(s) 19, 97, 154, 789
HhaI GCGC 2 cut(s) 652, 749
Hin1I GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
Hin1II CATG 6 cut(s) 742, 833, 1045, 1144, 1175, 1268
Hin6I GCGC 2 cut(s) 650, 747
HinP1I GCGC 2 cut(s) 650, 747
HindIII AAGCTT 1 cut(s) 920
HinfI GANTC 7 cut(s) 216, 230, 302, 316, 456, 508, 569
HphI GGTGA 3 cut(s) 103, 535, 874
Hpy166II GTNNAC 2 cut(s) 472, 787
Hpy188I TCNGA 6 cut(s) 321, 513, 900, 997, 1207, 1218
Hpy8I GTNNAC 2 cut(s) 472, 787
Hpy99I CGWCG 8 cut(s) 92, 161, 164, 170, 431, 434, 620, 638
HpyAV CCTTC 4 cut(s) 112, 351, 685, 1213
HpyCH4III ACNGT 5 cut(s) 59, 587, 686, 1159, 1190
HpyCH4IV ACGT 3 cut(s) 383, 429, 618
HpyCH4V TGCA 9 cut(s) 532, 875, 884, 947, 1041, 1235, 1259, 1274, 1319
HpyF3I CTNAG 2 cut(s) 1204, 1302
HpySE526I ACGT 3 cut(s) 383, 429, 618
Hsp92I GRCGYC 6 cut(s) 108, 165, 429, 618, 747, 800
Hsp92II CATG 6 cut(s) 742, 833, 1045, 1144, 1175, 1268
HspAI GCGC 2 cut(s) 650, 747
KasI GGCGCC 1 cut(s) 746
Kpn2I TCCGGA 1 cut(s) 464
KroI GCCGGC 1 cut(s) 487
KroNI GCCGGC 1 cut(s) 489
Kzo9I GATC 4 cut(s) 72, 190, 283, 835
LmnI GCTCC 6 cut(s) 250, 394, 467, 561, 928, 1210
Lsp1109I GCAGC 4 cut(s) 363, 366, 811, 1084
LweI GCATC 2 cut(s) 1222, 1246
MaeI CTAG 3 cut(s) 267, 273, 1046
MaeII ACGT 3 cut(s) 383, 429, 618
MaeIII GTNAC 2 cut(s) 109, 1364
MalI GATC 4 cut(s) 74, 192, 285, 837
MbiI CCGCTC 1 cut(s) 236
MboI GATC 4 cut(s) 72, 190, 283, 835
MflI RGATCY 2 cut(s) 72, 835
MhlI GDGCHC 2 cut(s) 255, 399
MlsI TGGCCA 2 cut(s) 578, 728
MluNI TGGCCA 2 cut(s) 578, 728
Mly113I GGCGCC 1 cut(s) 747
MlyI GAGTC 5 cut(s) 239, 325, 465, 517, 563
MmeI TCCRAC 2 cut(s) 491, 1172
Mox20I TGGCCA 2 cut(s) 578, 728
MreI CGCCGGCG 1 cut(s) 487
MroI TCCGGA 1 cut(s) 464
MroNI GCCGGC 1 cut(s) 487
MroXI GAANNNNTTC 1 cut(s) 1058
MscI TGGCCA 2 cut(s) 578, 728
MseI TTAA 2 cut(s) 1133, 1381
MslI CAYNNNNRTG 2 cut(s) 543, 844
Msp20I TGGCCA 2 cut(s) 578, 728
MspA1I CMGCKG 1 cut(s) 1097
MspR9I CCNGG 3 cut(s) 310, 400, 668
MvaI CCWGG 1 cut(s) 400
MvnI CGCG 1 cut(s) 368
NaeI GCCGGC 1 cut(s) 489
NarI GGCGCC 1 cut(s) 747
NciI CCSGG 2 cut(s) 310, 668
NcoI CCATGG 2 cut(s) 738, 829
NdeII GATC 4 cut(s) 72, 190, 283, 835
NgoMIV GCCGGC 1 cut(s) 487
NheI GCTAGC 1 cut(s) 1045
NlaIII CATG 6 cut(s) 742, 833, 1045, 1144, 1175, 1268
NlaIV GGNNCC 6 cut(s) 74, 252, 396, 463, 748, 930
NmeAIII GCCGAG 2 cut(s) 30, 339
NmuCI GTSAC 2 cut(s) 109, 1364
NspI RCATGY 1 cut(s) 1045
NspV TTCGAA 1 cut(s) 214
OliI CACNNNNGTG 1 cut(s) 543
PaeI GCATGC 1 cut(s) 1045
PagI TCATGA 1 cut(s) 1264
PceI AGGCCT 1 cut(s) 1313
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 630
PdiI GCCGGC 1 cut(s) 489
PdmI GAANNNNTTC 1 cut(s) 1058
PfeI GAWTC 2 cut(s) 216, 302
PflFI GACNNNGTC 1 cut(s) 164
PleI GAGTC 5 cut(s) 238, 324, 464, 516, 563
PluTI GGCGCC 1 cut(s) 750
PpsI GAGTC 5 cut(s) 238, 324, 464, 516, 563
PpuMI RGGWCCY 1 cut(s) 952
Psp5II RGGWCCY 1 cut(s) 952
Psp6I CCWGG 1 cut(s) 398
PspGI CCWGG 1 cut(s) 398
PspN4I GGNNCC 6 cut(s) 74, 252, 396, 463, 748, 930
PspPI GGNCC 3 cut(s) 279, 952, 1087
PspPPI RGGWCCY 1 cut(s) 952
PsuI RGATCY 2 cut(s) 72, 835
PsyI GACNNNGTC 1 cut(s) 164
PvuII CAGCTG 1 cut(s) 1097
RsaI GTAC 4 cut(s) 473, 482, 641, 665
RsaNI GTAC 4 cut(s) 472, 481, 640, 664
RseI CAYNNNNRTG 2 cut(s) 543, 844
SaqAI TTAA 2 cut(s) 1133, 1381
Sau3AI GATC 4 cut(s) 72, 190, 283, 835
Sau96I GGNCC 3 cut(s) 279, 952, 1087
SchI GAGTC 5 cut(s) 239, 325, 465, 517, 563
ScrFI CCNGG 3 cut(s) 310, 400, 668
SduI GDGCHC 2 cut(s) 255, 399
SfaNI GCATC 2 cut(s) 1222, 1246
SfcI CTRYAG 2 cut(s) 25, 906
SfiI GGCCNNNNNGGCC 1 cut(s) 725
SfoI GGCGCC 1 cut(s) 748
SfuI TTCGAA 1 cut(s) 214
SgrAI CRCCGGYG 1 cut(s) 487
SinI GGWCC 2 cut(s) 952, 1087
SmiMI CAYNNNNRTG 2 cut(s) 543, 844
SmlI CTYRAG 1 cut(s) 1292
SmoI CTYRAG 1 cut(s) 1292
SphI GCATGC 1 cut(s) 1045
SseBI AGGCCT 1 cut(s) 1313
SspDI GGCGCC 1 cut(s) 746
SspMI CTAG 3 cut(s) 267, 273, 1046
StuI AGGCCT 1 cut(s) 1313
StyD4I CCNGG 3 cut(s) 308, 398, 666
StyI CCWWGG 4 cut(s) 174, 738, 829, 856
TaaI ACNGT 5 cut(s) 59, 587, 686, 1159, 1190
TaiI ACGT 3 cut(s) 386, 432, 621
TaqI TCGA 6 cut(s) 96, 156, 189, 214, 432, 1360
TatI WGTACW 1 cut(s) 471
TauI GCSGC 6 cut(s) 140, 143, 351, 371, 674, 747
TfiI GAWTC 2 cut(s) 216, 302
Tru1I TTAA 2 cut(s) 1133, 1381
Tru9I TTAA 2 cut(s) 1133, 1381
TscAI CASTG 3 cut(s) 562, 985, 1164
TseFI GTSAC 2 cut(s) 109, 1364
TseI GCWGC 4 cut(s) 351, 354, 824, 1097
Tsp45I GTSAC 2 cut(s) 109, 1364
TspDTI ATGAA 2 cut(s) 1253, 1281
TspGWI ACGGA 1 cut(s) 954
TspRI CASTG 3 cut(s) 562, 985, 1164
Tth111I GACNNNGTC 1 cut(s) 164
VpaK11BI GGWCC 2 cut(s) 952, 1087
XapI RAATTY 4 cut(s) 442, 493, 1012, 1268
XceI RCATGY 1 cut(s) 1045
XcmI CCANNNNNNNNNTGG 1 cut(s) 736
XmnI GAANNNNTTC 1 cut(s) 1058
XspI CTAG 3 cut(s) 267, 273, 1046
ZraI GACGTC 2 cut(s) 430, 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.