RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 349 - 490 | 2.5e-10 | C-JID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1004 |
| Acc36I | ACCTGC | 2 cut(s) | 703, 1004 |
| AccI | GTMKAC | 1 cut(s) | 1460 |
| AccII | CGCG | 1 cut(s) | 726 |
| AccIII | TCCGGA | 1 cut(s) | 1063 |
| AciI | CCGC | 4 cut(s) | 1146, 1233, 1419, 1450 |
| AclWI | GGATC | 3 cut(s) | 876, 890, 903 |
| AcsI | RAATTY | 3 cut(s) | 272, 789, 1059 |
| AcuI | CTGAAG | 3 cut(s) | 120, 740, 1111 |
| AcyI | GRCGYC | 1 cut(s) | 1394 |
| AfaI | GTAC | 2 cut(s) | 124, 693 |
| AflII | CTTAAG | 1 cut(s) | 736 |
| AflIII | ACRYGT | 2 cut(s) | 1205, 1335 |
| AjiI | CACGTC | 1 cut(s) | 813 |
| AjnI | CCWGG | 2 cut(s) | 216, 1048 |
| Alw21I | GWGCWC | 1 cut(s) | 578 |
| Alw26I | GTCTC | 4 cut(s) | 128, 215, 330, 638 |
| AlwI | GGATC | 3 cut(s) | 876, 890, 903 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 531, 603 |
| Aor13HI | TCCGGA | 1 cut(s) | 1063 |
| AoxI | GGCC | 1 cut(s) | 1317 |
| ApeKI | GCWGC | 6 cut(s) | 603, 721, 772, 781, 845, 1230 |
| ApoI | RAATTY | 3 cut(s) | 272, 789, 1059 |
| AseI | ATTAAT | 2 cut(s) | 72, 921 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 247, 621 |
| AspA2I | CCTAGG | 1 cut(s) | 890 |
| AspLEI | GCGC | 2 cut(s) | 721, 726 |
| AspS9I | GGNCC | 1 cut(s) | 434 |
| AsuC2I | CCSGG | 1 cut(s) | 289 |
| AsuHPI | GGTGA | 4 cut(s) | 303, 428, 1250, 1444 |
| AsuII | TTCGAA | 1 cut(s) | 1276 |
| AvaII | GGWCC | 1 cut(s) | 434 |
| AvrII | CCTAGG | 1 cut(s) | 890 |
| AxyI | CCTNAGG | 1 cut(s) | 438 |
| BamHI | GGATCC | 1 cut(s) | 895 |
| Bbv12I | GWGCWC | 1 cut(s) | 578 |
| BbvI | GCAGC | 6 cut(s) | 590, 708, 759, 793, 832, 1242 |
| BccI | CCATC | 2 cut(s) | 322, 623 |
| BceAI | ACGGC | 1 cut(s) | 489 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1097, 1131 |
| BciT130I | CCWGG | 2 cut(s) | 218, 1050 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BcnI | CCSGG | 1 cut(s) | 289 |
| BcoDI | GTCTC | 4 cut(s) | 128, 215, 330, 638 |
| BfaI | CTAG | 2 cut(s) | 428, 891 |
| BfrI | CTTAAG | 1 cut(s) | 736 |
| BfuAI | ACCTGC | 2 cut(s) | 703, 1004 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1391 |
| BglII | AGATCT | 2 cut(s) | 109, 664 |
| BisI | GCNGC | 7 cut(s) | 604, 722, 773, 782, 846, 1231, 1420 |
| BlnI | CCTAGG | 1 cut(s) | 890 |
| BlsI | GCNGC | 7 cut(s) | 605, 723, 774, 783, 847, 1232, 1421 |
| Bme1390I | CCNGG | 3 cut(s) | 218, 289, 1050 |
| Bme18I | GGWCC | 1 cut(s) | 434 |
| BmgBI | CACGTC | 1 cut(s) | 813 |
| BmgT120I | GGNCC | 1 cut(s) | 434 |
| BmiI | GGNNCC | 2 cut(s) | 676, 897 |
| BmrFI | CCNGG | 3 cut(s) | 218, 289, 1050 |
| BmrI | ACTGGG | 1 cut(s) | 112 |
| BmsI | GCATC | 4 cut(s) | 958, 1082, 1455, 1459 |
| BmuI | ACTGGG | 1 cut(s) | 112 |
| Bpu14I | TTCGAA | 1 cut(s) | 1276 |
| BpuEI | CTTGAG | 1 cut(s) | 491 |
| BpuMI | CCSGG | 1 cut(s) | 289 |
| Bsa29I | ATCGAT | 1 cut(s) | 317 |
| BsaAI | YACGTR | 1 cut(s) | 1312 |
| BsaBI | GATNNNNATC | 1 cut(s) | 423 |
| BsaHI | GRCGYC | 1 cut(s) | 1394 |
| BsaI | GGTCTC | 2 cut(s) | 330, 638 |
| BsaJI | CCNNGG | 3 cut(s) | 217, 890, 1268 |
| BsaWI | WCCGGW | 1 cut(s) | 1063 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| Bse21I | CCTNAGG | 1 cut(s) | 438 |
| Bse3DI | GCAATG | 2 cut(s) | 271, 776 |
| Bse8I | GATNNNNATC | 1 cut(s) | 423 |
| BseAI | TCCGGA | 1 cut(s) | 1063 |
| BseBI | CCWGG | 2 cut(s) | 218, 1050 |
| BseCI | ATCGAT | 1 cut(s) | 317 |
| BseDI | CCNNGG | 3 cut(s) | 217, 890, 1268 |
| BseGI | GGATG | 3 cut(s) | 213, 1097, 1446 |
| BseJI | GATNNNNATC | 1 cut(s) | 423 |
| BseMI | GCAATG | 2 cut(s) | 271, 776 |
| BseMII | CTCAG | 3 cut(s) | 538, 610, 991 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseXI | GCAGC | 6 cut(s) | 590, 708, 759, 793, 832, 1242 |
| BsgI | GTGCAG | 2 cut(s) | 793, 1032 |
| Bsh1236I | CGCG | 1 cut(s) | 726 |
| BshFI | GGCC | 1 cut(s) | 1319 |
| BshVI | ATCGAT | 1 cut(s) | 317 |
| BsiHKAI | GWGCWC | 1 cut(s) | 578 |
| BsiSI | CCGG | 2 cut(s) | 288, 1064 |
| BslFI | GGGAC | 1 cut(s) | 304 |
| BsmAI | GTCTC | 4 cut(s) | 128, 215, 330, 638 |
| BsmBI | CGTCTC | 1 cut(s) | 128 |
| BsmFI | GGGAC | 1 cut(s) | 304 |
| BsmI | GAATGC | 2 cut(s) | 621, 848 |
| BsnI | GGCC | 1 cut(s) | 1319 |
| Bso31I | GGTCTC | 2 cut(s) | 330, 638 |
| Bsp119I | TTCGAA | 1 cut(s) | 1276 |
| Bsp1286I | GDGCHC | 1 cut(s) | 578 |
| Bsp13I | TCCGGA | 1 cut(s) | 1063 |
| Bsp143I | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| Bsp19I | CCATGG | 1 cut(s) | 1268 |
| BspACI | CCGC | 4 cut(s) | 1146, 1233, 1419, 1450 |
| BspANI | GGCC | 1 cut(s) | 1319 |
| BspCNI | CTCAG | 3 cut(s) | 537, 609, 990 |
| BspDI | ATCGAT | 1 cut(s) | 317 |
| BspEI | TCCGGA | 1 cut(s) | 1063 |
| BspFNI | CGCG | 1 cut(s) | 726 |
| BspHI | TCATGA | 1 cut(s) | 1465 |
| BspLI | GGNNCC | 2 cut(s) | 676, 897 |
| BspMI | ACCTGC | 2 cut(s) | 703, 1004 |
| BspPI | GGATC | 3 cut(s) | 876, 890, 903 |
| BspQI | GCTCTTC | 1 cut(s) | 815 |
| BspT104I | TTCGAA | 1 cut(s) | 1276 |
| BspTI | CTTAAG | 1 cut(s) | 736 |
| BspTNI | GGTCTC | 2 cut(s) | 330, 638 |
| BsrDI | GCAATG | 2 cut(s) | 271, 776 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 3 cut(s) | 217, 890, 1268 |
| BssMI | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| BssNAI | GTATAC | 1 cut(s) | 1461 |
| BssNI | GRCGYC | 1 cut(s) | 1394 |
| BssT1I | CCWWGG | 2 cut(s) | 890, 1268 |
| Bst1107I | GTATAC | 1 cut(s) | 1461 |
| Bst2UI | CCWGG | 2 cut(s) | 218, 1050 |
| Bst4CI | ACNGT | 3 cut(s) | 155, 565, 1256 |
| Bst6I | CTCTTC | 1 cut(s) | 815 |
| BstACI | GRCGYC | 1 cut(s) | 1394 |
| BstAFI | CTTAAG | 1 cut(s) | 736 |
| BstBAI | YACGTR | 1 cut(s) | 1312 |
| BstBI | TTCGAA | 1 cut(s) | 1276 |
| BstC8I | GCNNGC | 2 cut(s) | 700, 728 |
| BstDSI | CCRYGG | 1 cut(s) | 1268 |
| BstF5I | GGATG | 3 cut(s) | 213, 1097, 1446 |
| BstFNI | CGCG | 1 cut(s) | 726 |
| BstHHI | GCGC | 2 cut(s) | 721, 726 |
| BstKTI | GATC | 7 cut(s) | 112, 421, 667, 871, 898, 1009, 1309 |
| BstMAI | GTCTC | 4 cut(s) | 128, 215, 330, 638 |
| BstMBI | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 727, 778, 781, 1391 |
| BstNI | CCWGG | 2 cut(s) | 218, 1050 |
| BstNSI | RCATGY | 4 cut(s) | 1209, 1339, 1414, 1456 |
| BstSCI | CCNGG | 3 cut(s) | 216, 287, 1048 |
| BstUI | CGCG | 1 cut(s) | 726 |
| BstV1I | GCAGC | 6 cut(s) | 590, 708, 759, 793, 832, 1242 |
| BstX2I | RGATCY | 3 cut(s) | 109, 664, 895 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 321 |
| BstYI | RGATCY | 3 cut(s) | 109, 664, 895 |
| BstZ17I | GTATAC | 1 cut(s) | 1461 |
| Bsu15I | ATCGAT | 1 cut(s) | 317 |
| Bsu36I | CCTNAGG | 1 cut(s) | 438 |
| BsuRI | GGCC | 1 cut(s) | 1319 |
| BsuTUI | ATCGAT | 1 cut(s) | 317 |
| BtgI | CCRYGG | 1 cut(s) | 1268 |
| BtrI | CACGTC | 1 cut(s) | 813 |
| BtsCI | GGATG | 3 cut(s) | 213, 1097, 1446 |
| BtsI | GCAGTG | 1 cut(s) | 387 |
| BtsIMutI | CAGTG | 4 cut(s) | 125, 387, 604, 764 |
| BveI | ACCTGC | 2 cut(s) | 703, 1004 |
| Cac8I | GCNNGC | 2 cut(s) | 700, 728 |
| CaiI | CAGNNNCTG | 2 cut(s) | 531, 603 |
| CciI | TCATGA | 1 cut(s) | 1465 |
| CfoI | GCGC | 2 cut(s) | 721, 726 |
| Cfr13I | GGNCC | 1 cut(s) | 434 |
| ClaI | ATCGAT | 1 cut(s) | 317 |
| CseI | GACGC | 1 cut(s) | 1383 |
| Csp6I | GTAC | 2 cut(s) | 123, 692 |
| CviAII | CATG | 9 cut(s) | 261, 679, 853, 1206, 1269, 1336, 1411, 1453, 1466 |
| CviQI | GTAC | 2 cut(s) | 123, 692 |
| DpnI | GATC | 7 cut(s) | 111, 420, 666, 870, 897, 1008, 1308 |
| DpnII | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| Eam1104I | CTCTTC | 1 cut(s) | 815 |
| EarI | CTCTTC | 1 cut(s) | 815 |
| Eco130I | CCWWGG | 2 cut(s) | 890, 1268 |
| Eco31I | GGTCTC | 2 cut(s) | 330, 638 |
| Eco32I | GATATC | 2 cut(s) | 880, 1143 |
| Eco47I | GGWCC | 1 cut(s) | 434 |
| Eco57I | CTGAAG | 3 cut(s) | 120, 740, 1111 |
| Eco81I | CCTNAGG | 1 cut(s) | 438 |
| EcoRI | GAATTC | 1 cut(s) | 272 |
| EcoRII | CCWGG | 2 cut(s) | 216, 1048 |
| EcoRV | GATATC | 2 cut(s) | 880, 1143 |
| EcoT14I | CCWWGG | 2 cut(s) | 890, 1268 |
| ErhI | CCWWGG | 2 cut(s) | 890, 1268 |
| Esp3I | CGTCTC | 1 cut(s) | 128 |
| FaeI | CATG | 9 cut(s) | 264, 682, 856, 1209, 1272, 1339, 1414, 1456, 1469 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 389, 421, 1202, 1234 |
| FaqI | GGGAC | 1 cut(s) | 304 |
| FatI | CATG | 9 cut(s) | 260, 678, 852, 1205, 1268, 1335, 1410, 1452, 1465 |
| FauNDI | CATATG | 1 cut(s) | 450 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| FblI | GTMKAC | 1 cut(s) | 1460 |
| Fnu4HI | GCNGC | 7 cut(s) | 604, 722, 773, 782, 846, 1231, 1420 |
| FokI | GGATG | 3 cut(s) | 200, 1104, 1433 |
| Fsp4HI | GCNGC | 7 cut(s) | 604, 722, 773, 782, 846, 1231, 1420 |
| FspBI | CTAG | 2 cut(s) | 428, 891 |
| GlaI | GCGC | 2 cut(s) | 720, 725 |
| GluI | GCNGC | 7 cut(s) | 604, 722, 773, 782, 846, 1231, 1420 |
| HaeIII | GGCC | 1 cut(s) | 1319 |
| HapII | CCGG | 2 cut(s) | 288, 1064 |
| HgaI | GACGC | 1 cut(s) | 1383 |
| HhaI | GCGC | 2 cut(s) | 721, 726 |
| Hin1I | GRCGYC | 1 cut(s) | 1394 |
| Hin1II | CATG | 9 cut(s) | 264, 682, 856, 1209, 1272, 1339, 1414, 1456, 1469 |
| Hin6I | GCGC | 2 cut(s) | 719, 724 |
| HinP1I | GCGC | 2 cut(s) | 719, 724 |
| HincII | GTYRAC | 1 cut(s) | 1300 |
| HindII | GTYRAC | 1 cut(s) | 1300 |
| HindIII | AAGCTT | 3 cut(s) | 91, 335, 752 |
| HinfI | GANTC | 5 cut(s) | 11, 49, 376, 1158, 1273 |
| HpaII | CCGG | 2 cut(s) | 288, 1064 |
| HphI | GGTGA | 4 cut(s) | 303, 428, 1250, 1444 |
| Hpy166II | GTNNAC | 4 cut(s) | 123, 764, 1300, 1461 |
| Hpy188I | TCNGA | 3 cut(s) | 253, 396, 980 |
| Hpy188III | TCNNGA | 7 cut(s) | 107, 194, 509, 626, 875, 1064, 1466 |
| Hpy8I | GTNNAC | 4 cut(s) | 123, 764, 1300, 1461 |
| HpyAV | CCTTC | 6 cut(s) | 186, 568, 1235, 1330, 1343, 1423 |
| HpyCH4III | ACNGT | 3 cut(s) | 155, 565, 1256 |
| HpyCH4IV | ACGT | 4 cut(s) | 280, 812, 835, 1311 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 727, 778, 781, 1391 |
| HpySE526I | ACGT | 4 cut(s) | 280, 812, 835, 1311 |
| Hsp92I | GRCGYC | 1 cut(s) | 1394 |
| Hsp92II | CATG | 9 cut(s) | 264, 682, 856, 1209, 1272, 1339, 1414, 1456, 1469 |
| HspAI | GCGC | 2 cut(s) | 719, 724 |
| Kpn2I | TCCGGA | 1 cut(s) | 1063 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| LguI | GCTCTTC | 1 cut(s) | 815 |
| LmnI | GCTCC | 2 cut(s) | 892, 951 |
| Lsp1109I | GCAGC | 6 cut(s) | 590, 708, 759, 793, 832, 1242 |
| LweI | GCATC | 4 cut(s) | 958, 1082, 1455, 1459 |
| MaeI | CTAG | 2 cut(s) | 428, 891 |
| MaeII | ACGT | 4 cut(s) | 280, 812, 835, 1311 |
| MaeIII | GTNAC | 2 cut(s) | 42, 149 |
| MalI | GATC | 7 cut(s) | 111, 420, 666, 870, 897, 1008, 1308 |
| MboI | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| MboII | GAAGA | 5 cut(s) | 16, 139, 832, 1033, 1315 |
| MfeI | CAATTG | 2 cut(s) | 742, 989 |
| MflI | RGATCY | 3 cut(s) | 109, 664, 895 |
| MhlI | GDGCHC | 1 cut(s) | 578 |
| MlyI | GAGTC | 1 cut(s) | 1152 |
| MmeI | TCCRAC | 1 cut(s) | 412 |
| MnlI | CCTC | 6 cut(s) | 564, 605, 658, 790, 1081, 1324 |
| MroI | TCCGGA | 1 cut(s) | 1063 |
| MroXI | GAANNNNTTC | 2 cut(s) | 247, 621 |
| MseI | TTAA | 6 cut(s) | 62, 72, 372, 581, 737, 921 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1210, 1257, 1451 |
| MspA1I | CMGCKG | 3 cut(s) | 1148, 1233, 1419 |
| MspCI | CTTAAG | 1 cut(s) | 736 |
| MspI | CCGG | 2 cut(s) | 288, 1064 |
| MspR9I | CCNGG | 3 cut(s) | 218, 289, 1050 |
| MteI | GCGCNGCGC | 1 cut(s) | 722 |
| MunI | CAATTG | 2 cut(s) | 742, 989 |
| Mva1269I | GAATGC | 2 cut(s) | 621, 848 |
| MvaI | CCWGG | 2 cut(s) | 218, 1050 |
| MvnI | CGCG | 1 cut(s) | 726 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 727, 778, 781, 1391 |
| NciI | CCSGG | 1 cut(s) | 289 |
| NcoI | CCATGG | 1 cut(s) | 1268 |
| NdeI | CATATG | 1 cut(s) | 450 |
| NdeII | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| NlaIII | CATG | 9 cut(s) | 264, 682, 856, 1209, 1272, 1339, 1414, 1456, 1469 |
| NlaIV | GGNNCC | 2 cut(s) | 676, 897 |
| NspI | RCATGY | 4 cut(s) | 1209, 1339, 1414, 1456 |
| NspV | TTCGAA | 1 cut(s) | 1276 |
| PagI | TCATGA | 1 cut(s) | 1465 |
| PaqCI | CACCTGC | 1 cut(s) | 1004 |
| PciI | ACATGT | 2 cut(s) | 1205, 1335 |
| PciSI | GCTCTTC | 1 cut(s) | 815 |
| PctI | GAATGC | 2 cut(s) | 621, 848 |
| PdmI | GAANNNNTTC | 2 cut(s) | 247, 621 |
| PfeI | GAWTC | 4 cut(s) | 11, 49, 376, 1273 |
| PfoI | TCCNGGA | 1 cut(s) | 287 |
| PkrI | GCNGC | 7 cut(s) | 605, 723, 774, 783, 847, 1232, 1421 |
| PleI | GAGTC | 1 cut(s) | 1152 |
| PpsI | GAGTC | 1 cut(s) | 1152 |
| Ppu21I | YACGTR | 1 cut(s) | 1312 |
| PscI | ACATGT | 2 cut(s) | 1205, 1335 |
| PshBI | ATTAAT | 2 cut(s) | 72, 921 |
| Psp6I | CCWGG | 2 cut(s) | 216, 1048 |
| PspGI | CCWGG | 2 cut(s) | 216, 1048 |
| PspN4I | GGNNCC | 2 cut(s) | 676, 897 |
| PspPI | GGNCC | 1 cut(s) | 434 |
| PstNI | CAGNNNCTG | 2 cut(s) | 531, 603 |
| PsuI | RGATCY | 3 cut(s) | 109, 664, 895 |
| RsaI | GTAC | 2 cut(s) | 124, 693 |
| RsaNI | GTAC | 2 cut(s) | 123, 692 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1210, 1257, 1451 |
| SapI | GCTCTTC | 1 cut(s) | 815 |
| SaqAI | TTAA | 6 cut(s) | 62, 72, 372, 581, 737, 921 |
| SatI | GCNGC | 7 cut(s) | 604, 722, 773, 782, 846, 1231, 1420 |
| Sau3AI | GATC | 7 cut(s) | 109, 418, 664, 868, 895, 1006, 1306 |
| Sau96I | GGNCC | 1 cut(s) | 434 |
| SchI | GAGTC | 1 cut(s) | 1152 |
| ScrFI | CCNGG | 3 cut(s) | 218, 289, 1050 |
| SduI | GDGCHC | 1 cut(s) | 578 |
| SfaNI | GCATC | 4 cut(s) | 958, 1082, 1455, 1459 |
| SfuI | TTCGAA | 1 cut(s) | 1276 |
| SinI | GGWCC | 1 cut(s) | 434 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1210, 1257, 1451 |
| SmlI | CTYRAG | 2 cut(s) | 470, 736 |
| SmoI | CTYRAG | 2 cut(s) | 470, 736 |
| SsiI | CCGC | 4 cut(s) | 1146, 1233, 1419, 1450 |
| SspI | AATATT | 1 cut(s) | 345 |
| SspMI | CTAG | 2 cut(s) | 428, 891 |
| StyD4I | CCNGG | 3 cut(s) | 216, 287, 1048 |
| StyI | CCWWGG | 2 cut(s) | 890, 1268 |
| TaaI | ACNGT | 3 cut(s) | 155, 565, 1256 |
| TaiI | ACGT | 4 cut(s) | 283, 815, 838, 1314 |
| TaqI | TCGA | 4 cut(s) | 317, 1107, 1139, 1276 |
| TaqII | GACCGA | 1 cut(s) | 557 |
| TauI | GCSGC | 1 cut(s) | 1422 |
| TfiI | GAWTC | 4 cut(s) | 11, 49, 376, 1273 |
| Tru1I | TTAA | 6 cut(s) | 62, 72, 372, 581, 737, 921 |
| Tru9I | TTAA | 6 cut(s) | 62, 72, 372, 581, 737, 921 |
| TscAI | CASTG | 4 cut(s) | 125, 394, 604, 764 |
| TseI | GCWGC | 6 cut(s) | 603, 721, 772, 781, 845, 1230 |
| TspDTI | ATGAA | 6 cut(s) | 17, 168, 841, 1071, 1263, 1275 |
| TspRI | CASTG | 4 cut(s) | 125, 394, 604, 764 |
| Vha464I | CTTAAG | 1 cut(s) | 736 |
| VpaK11BI | GGWCC | 1 cut(s) | 434 |
| VspI | ATTAAT | 2 cut(s) | 72, 921 |
| XapI | RAATTY | 3 cut(s) | 272, 789, 1059 |
| XceI | RCATGY | 4 cut(s) | 1209, 1339, 1414, 1456 |
| XmaJI | CCTAGG | 1 cut(s) | 890 |
| XmiI | GTMKAC | 1 cut(s) | 1460 |
| XmnI | GAANNNNTTC | 2 cut(s) | 247, 621 |
| XspI | CTAG | 2 cut(s) | 428, 891 |