TMV resistance protein N-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1091, 1449, 1797 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| AccBSI | CCGCTC | 1 cut(s) | 1130 |
| AccI | GTMKAC | 1 cut(s) | 2675 |
| AccII | CGCG | 2 cut(s) | 201, 714 |
| AccIII | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| AciI | CCGC | 6 cut(s) | 119, 199, 297, 472, 712, 1130 |
| AclI | AACGTT | 1 cut(s) | 520 |
| AclWI | GGATC | 3 cut(s) | 452, 679, 2064 |
| AcoI | YGGCCR | 1 cut(s) | 985 |
| AcsI | RAATTY | 8 cut(s) | 771, 839, 1368, 1791, 1922, 2087, 2355, 2585 |
| AcuI | CTGAAG | 2 cut(s) | 1160, 2007 |
| AdeI | CACNNNGTG | 1 cut(s) | 169 |
| AfaI | GTAC | 4 cut(s) | 1838, 2101, 2300, 2454 |
| AfeI | AGCGCT | 1 cut(s) | 1826 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 155, 190, 556, 718, 994 |
| AflII | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| AflIII | ACRYGT | 3 cut(s) | 168, 466, 1719 |
| AhlI | ACTAGT | 1 cut(s) | 1490 |
| AjiI | CACGTC | 2 cut(s) | 169, 1722 |
| AjnI | CCWGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1506, 1538 |
| Alw21I | GWGCWC | 2 cut(s) | 330, 2888 |
| AlwI | GGATC | 3 cut(s) | 452, 679, 2064 |
| Ama87I | CYCGRG | 2 cut(s) | 272, 2555 |
| Aor13HI | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| Aor51HI | AGCGCT | 1 cut(s) | 1826 |
| AoxI | GGCC | 5 cut(s) | 611, 691, 985, 1849, 2819 |
| ApoI | RAATTY | 8 cut(s) | 771, 839, 1368, 1791, 1922, 2087, 2355, 2585 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1173, 3008 |
| AspLEI | GCGC | 2 cut(s) | 549, 1827 |
| AspS9I | GGNCC | 6 cut(s) | 293, 691, 997, 1070, 2265, 2770 |
| AsuHPI | GGTGA | 3 cut(s) | 202, 1817, 1920 |
| AvaI | CYCGRG | 2 cut(s) | 272, 2555 |
| AvaII | GGWCC | 5 cut(s) | 293, 997, 1070, 2265, 2770 |
| AxyI | CCTNAGG | 2 cut(s) | 1617, 1653 |
| BaeGI | GKGCMC | 1 cut(s) | 947 |
| BanII | GRGCYC | 3 cut(s) | 330, 2484, 2888 |
| BauI | CACGAG | 1 cut(s) | 810 |
| BbsI | GAAGAC | 2 cut(s) | 354, 1995 |
| Bbv12I | GWGCWC | 2 cut(s) | 330, 2888 |
| BccI | CCATC | 9 cut(s) | 49, 469, 1225, 1256, 1391, 1502, 1886, 1924, 2771 |
| BceAI | ACGGC | 1 cut(s) | 972 |
| BciT130I | CCWGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| BcuI | ACTAGT | 1 cut(s) | 1490 |
| BfaI | CTAG | 6 cut(s) | 752, 1098, 1491, 2687, 2942, 3039 |
| BfmI | CTRYAG | 1 cut(s) | 60 |
| BfoI | RGCGCY | 1 cut(s) | 1828 |
| BfrI | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| BglII | AGATCT | 1 cut(s) | 75 |
| Bme1390I | CCNGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| Bme18I | GGWCC | 5 cut(s) | 293, 997, 1070, 2265, 2770 |
| BmeT110I | CYCGRG | 2 cut(s) | 272, 2555 |
| BmgBI | CACGTC | 2 cut(s) | 169, 1722 |
| BmgT120I | GGNCC | 6 cut(s) | 293, 691, 997, 1070, 2265, 2770 |
| BmiI | GGNNCC | 5 cut(s) | 295, 1294, 1690, 2267, 2613 |
| BmrFI | CCNGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| BmrI | ACTGGG | 1 cut(s) | 1897 |
| BmsI | GCATC | 8 cut(s) | 93, 416, 550, 634, 1048, 1560, 2264, 2632 |
| BmuI | ACTGGG | 1 cut(s) | 1897 |
| BpiI | GAAGAC | 2 cut(s) | 354, 1995 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2551, 2583, 3018, 3050, 3020, 3052 |
| BpmI | CTGGAG | 9 cut(s) | 1071, 2648, 2852, 2864, 2910, 2939, 2959, 2980, 3070 |
| BpuEI | CTTGAG | 2 cut(s) | 1451, 2158 |
| Bsa29I | ATCGAT | 1 cut(s) | 87 |
| BsaAI | YACGTR | 2 cut(s) | 454, 2228 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1896 |
| BsaI | GGTCTC | 3 cut(s) | 2915, 2977, 2998 |
| BsaJI | CCNNGG | 4 cut(s) | 154, 184, 2405, 2740 |
| BsaWI | WCCGGW | 6 cut(s) | 237, 1691, 1930, 2053, 2730, 2948 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2883, 2913 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 155, 190, 556, 718, 994 |
| Bse118I | RCCGGY | 1 cut(s) | 549 |
| Bse1I | ACTGG | 6 cut(s) | 213, 678, 1041, 1892, 2201, 2502 |
| Bse21I | CCTNAGG | 2 cut(s) | 1617, 1653 |
| Bse3DI | GCAATG | 1 cut(s) | 1910 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1896 |
| BseAI | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| BseBI | CCWGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| BseCI | ATCGAT | 1 cut(s) | 87 |
| BseDI | CCNNGG | 4 cut(s) | 154, 184, 2405, 2740 |
| BseGI | GGATG | 8 cut(s) | 385, 431, 565, 674, 708, 1381, 1575, 1897 |
| BseJI | GATNNNNATC | 1 cut(s) | 1896 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 155, 190, 556, 718, 994 |
| BseMI | GCAATG | 1 cut(s) | 1910 |
| BseMII | CTCAG | 7 cut(s) | 84, 190, 902, 1076, 1809, 2078, 2806 |
| BseNI | ACTGG | 6 cut(s) | 213, 678, 1041, 1892, 2201, 2502 |
| BseRI | GAGGAG | 5 cut(s) | 294, 497, 1140, 3035, 3067 |
| BseSI | GKGCMC | 1 cut(s) | 947 |
| BseX3I | CGGCCG | 1 cut(s) | 985 |
| BsgI | GTGCAG | 1 cut(s) | 1773 |
| Bsh1236I | CGCG | 2 cut(s) | 201, 714 |
| Bsh1285I | CGRYCG | 1 cut(s) | 988 |
| BshFI | GGCC | 5 cut(s) | 613, 693, 987, 1851, 2821 |
| BshVI | ATCGAT | 1 cut(s) | 87 |
| BsiEI | CGRYCG | 1 cut(s) | 988 |
| BsiHKAI | GWGCWC | 2 cut(s) | 330, 2888 |
| BsiHKCI | CYCGRG | 2 cut(s) | 272, 2555 |
| BsiSI | CCGG | 7 cut(s) | 238, 550, 1692, 1931, 2054, 2731, 2949 |
| BslFI | GGGAC | 5 cut(s) | 2102, 2251, 2449, 2723, 2944 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 155, 190, 556, 718, 994 |
| BsmBI | CGTCTC | 2 cut(s) | 276, 1863 |
| BsmFI | GGGAC | 5 cut(s) | 2102, 2251, 2449, 2723, 2944 |
| BsmI | GAATGC | 2 cut(s) | 407, 1266 |
| BsnI | GGCC | 5 cut(s) | 613, 693, 987, 1851, 2821 |
| Bso31I | GGTCTC | 3 cut(s) | 2915, 2977, 2998 |
| BsoBI | CYCGRG | 2 cut(s) | 272, 2555 |
| Bsp1286I | GDGCHC | 4 cut(s) | 330, 947, 2484, 2888 |
| Bsp13I | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| Bsp1407I | TGTACA | 1 cut(s) | 2099 |
| Bsp143I | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| BspACI | CCGC | 6 cut(s) | 119, 199, 297, 472, 712, 1130 |
| BspANI | GGCC | 5 cut(s) | 613, 693, 987, 1851, 2821 |
| BspCNI | CTCAG | 7 cut(s) | 85, 189, 901, 1075, 1810, 2077, 2805 |
| BspDI | ATCGAT | 1 cut(s) | 87 |
| BspEI | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| BspFNI | CGCG | 2 cut(s) | 201, 714 |
| BspLI | GGNNCC | 5 cut(s) | 295, 1294, 1690, 2267, 2613 |
| BspMAI | CTGCAG | 1 cut(s) | 64 |
| BspPI | GGATC | 3 cut(s) | 452, 679, 2064 |
| BspQI | GCTCTTC | 1 cut(s) | 2655 |
| BspTI | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| BspTNI | GGTCTC | 3 cut(s) | 2915, 2977, 2998 |
| BsrBI | CCGCTC | 1 cut(s) | 1130 |
| BsrDI | GCAATG | 1 cut(s) | 1910 |
| BsrFI | RCCGGY | 1 cut(s) | 549 |
| BsrGI | TGTACA | 1 cut(s) | 2099 |
| BsrI | ACTGG | 6 cut(s) | 213, 678, 1041, 1892, 2201, 2502 |
| BssAI | RCCGGY | 1 cut(s) | 549 |
| BssECI | CCNNGG | 4 cut(s) | 154, 184, 2405, 2740 |
| BssMI | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| BssSI | CACGAG | 1 cut(s) | 810 |
| Bst2BI | CACGAG | 1 cut(s) | 810 |
| Bst2UI | CCWGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| Bst4CI | ACNGT | 5 cut(s) | 206, 766, 2099, 2303, 2767 |
| Bst6I | CTCTTC | 4 cut(s) | 136, 1866, 2238, 2655 |
| BstAFI | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2334 |
| BstAUI | TGTACA | 1 cut(s) | 2099 |
| BstBAI | YACGTR | 2 cut(s) | 454, 2228 |
| BstC8I | GCNNGC | 1 cut(s) | 2253 |
| BstF5I | GGATG | 8 cut(s) | 385, 431, 565, 674, 708, 1381, 1575, 1897 |
| BstFNI | CGCG | 2 cut(s) | 201, 714 |
| BstH2I | RGCGCY | 1 cut(s) | 1828 |
| BstHHI | GCGC | 2 cut(s) | 549, 1827 |
| BstKTI | GATC | 7 cut(s) | 49, 78, 460, 674, 962, 2059, 2878 |
| BstMBI | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| BstMCI | CGRYCG | 1 cut(s) | 988 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 503, 901, 1954, 2334, 2620, 2818 |
| BstNI | CCWGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| BstNSI | RCATGY | 3 cut(s) | 470, 1443, 1771 |
| BstSCI | CCNGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| BstSFI | CTRYAG | 1 cut(s) | 60 |
| BstSLI | GKGCMC | 1 cut(s) | 947 |
| BstUI | CGCG | 2 cut(s) | 201, 714 |
| BstV2I | GAAGAC | 2 cut(s) | 354, 1995 |
| BstX2I | RGATCY | 3 cut(s) | 75, 457, 2056 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2000, 2360, 2888 |
| BstYI | RGATCY | 3 cut(s) | 75, 457, 2056 |
| BstZI | CGGCCG | 1 cut(s) | 985 |
| Bsu15I | ATCGAT | 1 cut(s) | 87 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1617, 1653 |
| BsuRI | GGCC | 5 cut(s) | 613, 693, 987, 1851, 2821 |
| BsuTUI | ATCGAT | 1 cut(s) | 87 |
| BtrI | CACGTC | 2 cut(s) | 169, 1722 |
| BtsCI | GGATG | 8 cut(s) | 385, 431, 565, 674, 708, 1381, 1575, 1897 |
| BtsI | GCAGTG | 2 cut(s) | 57, 1303 |
| BtsIMutI | CAGTG | 4 cut(s) | 57, 685, 1303, 2208 |
| Cac8I | GCNNGC | 1 cut(s) | 2253 |
| CfoI | GCGC | 2 cut(s) | 549, 1827 |
| Cfr10I | RCCGGY | 1 cut(s) | 549 |
| Cfr13I | GGNCC | 6 cut(s) | 293, 691, 997, 1070, 2265, 2770 |
| ClaI | ATCGAT | 1 cut(s) | 87 |
| CseI | GACGC | 3 cut(s) | 348, 2530, 2816 |
| Csp6I | GTAC | 4 cut(s) | 1837, 2100, 2299, 2453 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1227, 1262 |
| CviAII | CATG | 9 cut(s) | 224, 369, 467, 1440, 1574, 1625, 1742, 1768, 2671 |
| CviQI | GTAC | 4 cut(s) | 1837, 2100, 2299, 2453 |
| DpnI | GATC | 7 cut(s) | 48, 77, 459, 673, 961, 2058, 2877 |
| DpnII | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| DraI | TTTAAA | 1 cut(s) | 2637 |
| DraIII | CACNNNGTG | 1 cut(s) | 169 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1534 |
| EaeI | YGGCCR | 1 cut(s) | 985 |
| EagI | CGGCCG | 1 cut(s) | 985 |
| Eam1104I | CTCTTC | 4 cut(s) | 136, 1866, 2238, 2655 |
| EarI | CTCTTC | 4 cut(s) | 136, 1866, 2238, 2655 |
| Ecl136II | GAGCTC | 2 cut(s) | 328, 2886 |
| EclXI | CGGCCG | 1 cut(s) | 985 |
| Eco147I | AGGCCT | 3 cut(s) | 613, 1851, 2821 |
| Eco24I | GRGCYC | 3 cut(s) | 330, 2484, 2888 |
| Eco31I | GGTCTC | 3 cut(s) | 2915, 2977, 2998 |
| Eco32I | GATATC | 2 cut(s) | 1660, 1898 |
| Eco47I | GGWCC | 5 cut(s) | 293, 997, 1070, 2265, 2770 |
| Eco47III | AGCGCT | 1 cut(s) | 1826 |
| Eco52I | CGGCCG | 1 cut(s) | 985 |
| Eco53kI | GAGCTC | 2 cut(s) | 328, 2886 |
| Eco57I | CTGAAG | 2 cut(s) | 1160, 2007 |
| Eco81I | CCTNAGG | 2 cut(s) | 1617, 1653 |
| Eco88I | CYCGRG | 2 cut(s) | 272, 2555 |
| EcoICRI | GAGCTC | 2 cut(s) | 328, 2886 |
| EcoO109I | RGGNCCY | 2 cut(s) | 691, 997 |
| EcoRII | CCWGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| EcoRV | GATATC | 2 cut(s) | 1660, 1898 |
| EcoT22I | ATGCAT | 2 cut(s) | 1575, 1773 |
| EcoT38I | GRGCYC | 3 cut(s) | 330, 2484, 2888 |
| Esp3I | CGTCTC | 2 cut(s) | 276, 1863 |
| FaeI | CATG | 9 cut(s) | 227, 372, 470, 1443, 1577, 1628, 1745, 1771, 2674 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2972, 3004 |
| FaqI | GGGAC | 5 cut(s) | 2102, 2251, 2449, 2723, 2944 |
| FatI | CATG | 9 cut(s) | 223, 368, 466, 1439, 1573, 1624, 1741, 1767, 2670 |
| FauI | CCCGC | 2 cut(s) | 206, 304 |
| FauNDI | CATATG | 1 cut(s) | 1953 |
| FblI | GTMKAC | 1 cut(s) | 2675 |
| FokI | GGATG | 8 cut(s) | 392, 438, 572, 661, 715, 1388, 1582, 1904 |
| FriOI | GRGCYC | 3 cut(s) | 330, 2484, 2888 |
| FspBI | CTAG | 6 cut(s) | 752, 1098, 1491, 2687, 2942, 3039 |
| GlaI | GCGC | 2 cut(s) | 548, 1826 |
| GsuI | CTGGAG | 9 cut(s) | 1071, 2648, 2852, 2864, 2910, 2939, 2959, 2980, 3070 |
| HaeII | RGCGCY | 1 cut(s) | 1828 |
| HaeIII | GGCC | 5 cut(s) | 613, 693, 987, 1851, 2821 |
| HapII | CCGG | 7 cut(s) | 238, 550, 1692, 1931, 2054, 2731, 2949 |
| HgaI | GACGC | 3 cut(s) | 348, 2530, 2816 |
| HhaI | GCGC | 2 cut(s) | 549, 1827 |
| Hin1II | CATG | 9 cut(s) | 227, 372, 470, 1443, 1577, 1628, 1745, 1771, 2674 |
| Hin6I | GCGC | 2 cut(s) | 547, 1825 |
| HinP1I | GCGC | 2 cut(s) | 547, 1825 |
| HincII | GTYRAC | 1 cut(s) | 2676 |
| HindII | GTYRAC | 1 cut(s) | 2676 |
| HindIII | AAGCTT | 4 cut(s) | 846, 1736, 2144, 2276 |
| HpaII | CCGG | 7 cut(s) | 238, 550, 1692, 1931, 2054, 2731, 2949 |
| HphI | GGTGA | 3 cut(s) | 202, 1817, 1920 |
| Hpy166II | GTNNAC | 2 cut(s) | 1613, 2676 |
| Hpy8I | GTNNAC | 2 cut(s) | 1613, 2676 |
| Hpy99I | CGWCG | 2 cut(s) | 170, 206 |
| HpyAV | CCTTC | 8 cut(s) | 682, 988, 1184, 1453, 1768, 1841, 1850, 2007 |
| HpyCH4III | ACNGT | 5 cut(s) | 206, 766, 2099, 2303, 2767 |
| HpyCH4IV | ACGT | 5 cut(s) | 168, 453, 520, 1721, 2227 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 503, 901, 1954, 2334, 2620, 2818 |
| HpySE526I | ACGT | 5 cut(s) | 168, 453, 520, 1721, 2227 |
| Hsp92II | CATG | 9 cut(s) | 227, 372, 470, 1443, 1577, 1628, 1745, 1771, 2674 |
| HspAI | GCGC | 2 cut(s) | 547, 1825 |
| Kpn2I | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| Kzo9I | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| LguI | GCTCTTC | 1 cut(s) | 2655 |
| LmnI | GCTCC | 7 cut(s) | 901, 1127, 1621, 2611, 2620, 2707, 2809 |
| LweI | GCATC | 8 cut(s) | 93, 416, 550, 634, 1048, 1560, 2264, 2632 |
| MaeI | CTAG | 6 cut(s) | 752, 1098, 1491, 2687, 2942, 3039 |
| MaeII | ACGT | 5 cut(s) | 168, 453, 520, 1721, 2227 |
| MalI | GATC | 7 cut(s) | 48, 77, 459, 673, 961, 2058, 2877 |
| MbiI | CCGCTC | 1 cut(s) | 1130 |
| MboI | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| MfeI | CAATTG | 2 cut(s) | 1602, 2442 |
| MflI | RGATCY | 3 cut(s) | 75, 457, 2056 |
| MhlI | GDGCHC | 4 cut(s) | 330, 947, 2484, 2888 |
| MlyI | GAGTC | 4 cut(s) | 264, 740, 880, 2077 |
| MmeI | TCCRAC | 3 cut(s) | 2685, 2765, 2787 |
| Mph1103I | ATGCAT | 2 cut(s) | 1575, 1773 |
| MroI | TCCGGA | 3 cut(s) | 237, 2053, 2948 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1173, 3008 |
| MslI | CAYNNNNRTG | 2 cut(s) | 222, 1724 |
| MspA1I | CMGCKG | 1 cut(s) | 497 |
| MspCI | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| MspI | CCGG | 7 cut(s) | 238, 550, 1692, 1931, 2054, 2731, 2949 |
| MspR9I | CCNGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| MunI | CAATTG | 2 cut(s) | 1602, 2442 |
| Mva1269I | GAATGC | 2 cut(s) | 407, 1266 |
| MvaI | CCWGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| MvnI | CGCG | 2 cut(s) | 201, 714 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 503, 901, 1954, 2334, 2620, 2818 |
| NdeI | CATATG | 1 cut(s) | 1953 |
| NdeII | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| NlaIII | CATG | 9 cut(s) | 227, 372, 470, 1443, 1577, 1628, 1745, 1771, 2674 |
| NlaIV | GGNNCC | 5 cut(s) | 295, 1294, 1690, 2267, 2613 |
| NmeAIII | GCCGAG | 1 cut(s) | 963 |
| NsiI | ATGCAT | 2 cut(s) | 1575, 1773 |
| NspI | RCATGY | 3 cut(s) | 470, 1443, 1771 |
| PaeR7I | CTCGAG | 2 cut(s) | 272, 2555 |
| PceI | AGGCCT | 3 cut(s) | 613, 1851, 2821 |
| PciI | ACATGT | 1 cut(s) | 466 |
| PciSI | GCTCTTC | 1 cut(s) | 2655 |
| PctI | GAATGC | 2 cut(s) | 407, 1266 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1173, 3008 |
| PfoI | TCCNGGA | 1 cut(s) | 1072 |
| PleI | GAGTC | 4 cut(s) | 264, 740, 880, 2076 |
| PpsI | GAGTC | 4 cut(s) | 264, 740, 880, 2076 |
| Ppu21I | YACGTR | 2 cut(s) | 454, 2228 |
| PpuMI | RGGWCCY | 1 cut(s) | 997 |
| PscI | ACATGT | 1 cut(s) | 466 |
| PsiI | TTATAA | 3 cut(s) | 1091, 1449, 1797 |
| Psp124BI | GAGCTC | 2 cut(s) | 330, 2888 |
| Psp1406I | AACGTT | 1 cut(s) | 520 |
| Psp5II | RGGWCCY | 1 cut(s) | 997 |
| Psp6I | CCWGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| PspGI | CCWGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| PspN4I | GGNNCC | 5 cut(s) | 295, 1294, 1690, 2267, 2613 |
| PspPI | GGNCC | 6 cut(s) | 293, 691, 997, 1070, 2265, 2770 |
| PspPPI | RGGWCCY | 1 cut(s) | 997 |
| PstI | CTGCAG | 1 cut(s) | 64 |
| PsuI | RGATCY | 3 cut(s) | 75, 457, 2056 |
| PvuII | CAGCTG | 1 cut(s) | 497 |
| RsaI | GTAC | 4 cut(s) | 1838, 2101, 2300, 2454 |
| RsaNI | GTAC | 4 cut(s) | 1837, 2100, 2299, 2453 |
| RseI | CAYNNNNRTG | 2 cut(s) | 222, 1724 |
| SacI | GAGCTC | 2 cut(s) | 330, 2888 |
| SalI | GTCGAC | 1 cut(s) | 2674 |
| SapI | GCTCTTC | 1 cut(s) | 2655 |
| Sau3AI | GATC | 7 cut(s) | 46, 75, 457, 671, 959, 2056, 2875 |
| Sau96I | GGNCC | 6 cut(s) | 293, 691, 997, 1070, 2265, 2770 |
| SchI | GAGTC | 4 cut(s) | 264, 740, 880, 2077 |
| ScrFI | CCNGG | 5 cut(s) | 695, 1074, 2342, 2407, 2742 |
| SduI | GDGCHC | 4 cut(s) | 330, 947, 2484, 2888 |
| SfaNI | GCATC | 8 cut(s) | 93, 416, 550, 634, 1048, 1560, 2264, 2632 |
| SfcI | CTRYAG | 1 cut(s) | 60 |
| Sfr274I | CTCGAG | 2 cut(s) | 272, 2555 |
| SgrAI | CRCCGGYG | 1 cut(s) | 549 |
| SinI | GGWCC | 5 cut(s) | 293, 997, 1070, 2265, 2770 |
| SlaI | CTCGAG | 2 cut(s) | 272, 2555 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 222, 1724 |
| SmlI | CTYRAG | 7 cut(s) | 272, 1115, 1280, 1430, 2173, 2312, 2555 |
| SmoI | CTYRAG | 7 cut(s) | 272, 1115, 1280, 1430, 2173, 2312, 2555 |
| SpeI | ACTAGT | 1 cut(s) | 1490 |
| SseBI | AGGCCT | 3 cut(s) | 613, 1851, 2821 |
| SsiI | CCGC | 6 cut(s) | 119, 199, 297, 472, 712, 1130 |
| SspI | AATATT | 1 cut(s) | 2504 |
| SspMI | CTAG | 6 cut(s) | 752, 1098, 1491, 2687, 2942, 3039 |
| SstI | GAGCTC | 2 cut(s) | 330, 2888 |
| StuI | AGGCCT | 3 cut(s) | 613, 1851, 2821 |
| StyD4I | CCNGG | 5 cut(s) | 693, 1072, 2340, 2405, 2740 |
| TaaI | ACNGT | 5 cut(s) | 206, 766, 2099, 2303, 2767 |
| TaiI | ACGT | 5 cut(s) | 171, 456, 523, 1724, 2230 |
| TaqI | TCGA | 9 cut(s) | 87, 249, 273, 399, 525, 1845, 2556, 2675, 2775 |
| TatI | WGTACW | 2 cut(s) | 2099, 2298 |
| TauI | GCSGC | 2 cut(s) | 122, 714 |
| TscAI | CASTG | 4 cut(s) | 64, 685, 1310, 2208 |
| TspDTI | ATGAA | 8 cut(s) | 212, 357, 719, 847, 1176, 1182, 1730, 1824 |
| TspGWI | ACGGA | 2 cut(s) | 991, 1260 |
| TspRI | CASTG | 4 cut(s) | 64, 685, 1310, 2208 |
| Vha464I | CTTAAG | 3 cut(s) | 1115, 1280, 2312 |
| VpaK11BI | GGWCC | 5 cut(s) | 293, 997, 1070, 2265, 2770 |
| XapI | RAATTY | 8 cut(s) | 771, 839, 1368, 1791, 1922, 2087, 2355, 2585 |
| XbaI | TCTAGA | 1 cut(s) | 751 |
| XceI | RCATGY | 3 cut(s) | 470, 1443, 1771 |
| XhoI | CTCGAG | 2 cut(s) | 272, 2555 |
| XmiI | GTMKAC | 1 cut(s) | 2675 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1173, 3008 |
| XspI | CTAG | 6 cut(s) | 752, 1098, 1491, 2687, 2942, 3039 |
| Zsp2I | ATGCAT | 2 cut(s) | 1575, 1773 |