Toll - interleukin 1 - resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 47 - 226 | 6.4e-51 | TIR domain |
| TIR_2 | PF13676 | 50 - 169 | 1.3e-13 | TIR domain |
| NB-ARC | PF00931 | 231 - 397 | 1.1e-21 | NB-ARC domain |
| NACHT | PF05729 | 249 - 391 | 2.2e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 467 - 539 | 2.4e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 642 - 661 | 2.9e-06 | Leucine Rich Repeat |
| LRR_14 | PF23598 | 806 - 920 | 6.2e-08 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 900 - 980 | 1e-05 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 967 - 1145 | 2.4e-13 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 988 - 1067 | 1.5e-11 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2442 |
| Acc36I | ACCTGC | 2 cut(s) | 283, 3307 |
| AccB1I | GGYRCC | 1 cut(s) | 3278 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2460 |
| AccI | GTMKAC | 1 cut(s) | 2446 |
| AccII | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| AciI | CCGC | 8 cut(s) | 467, 1025, 1229, 1493, 1655, 1825, 1827, 3213 |
| AclI | AACGTT | 2 cut(s) | 493, 2095 |
| AclWI | GGATC | 3 cut(s) | 698, 943, 1622 |
| AcoI | YGGCCR | 2 cut(s) | 397, 1026 |
| AcsI | RAATTY | 8 cut(s) | 818, 1337, 1895, 2106, 2212, 2560, 2773, 3433 |
| AcuI | CTGAAG | 5 cut(s) | 200, 236, 1700, 2055, 3440 |
| AdeI | CACNNNGTG | 1 cut(s) | 351 |
| AfaI | GTAC | 5 cut(s) | 444, 1192, 1677, 3195, 3209 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 132, 133, 286, 970, 1638, 1725, 2460, 2646 |
| AflII | CTTAAG | 1 cut(s) | 3077 |
| AflIII | ACRYGT | 1 cut(s) | 1246 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1491, 1523 |
| Alw21I | GWGCWC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| Alw26I | GTCTC | 7 cut(s) | 647, 1809, 2344, 2428, 2985, 3128, 3242 |
| Alw44I | GTGCAC | 4 cut(s) | 518, 2069, 2500, 2713 |
| AlwI | GGATC | 3 cut(s) | 698, 943, 1622 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 74, 77, 1496 |
| Ama87I | CYCGRG | 1 cut(s) | 1631 |
| AoxI | GGCC | 2 cut(s) | 397, 1026 |
| ApaLI | GTGCAC | 4 cut(s) | 518, 2069, 2500, 2713 |
| ApoI | RAATTY | 8 cut(s) | 818, 1337, 1895, 2106, 2212, 2560, 2773, 3433 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1003, 1035 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 2650, 2730, 2863, 3012 |
| AspS9I | GGNCC | 3 cut(s) | 272, 630, 1275 |
| AsuC2I | CCSGG | 3 cut(s) | 586, 1632, 1633 |
| AsuHPI | GGTGA | 6 cut(s) | 98, 179, 717, 1783, 1825, 2390 |
| AsuII | TTCGAA | 1 cut(s) | 949 |
| AvaI | CYCGRG | 1 cut(s) | 1631 |
| AvaII | GGWCC | 3 cut(s) | 272, 630, 1275 |
| BaeGI | GKGCMC | 4 cut(s) | 522, 2073, 2504, 2717 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2159, 2192 |
| BalI | TGGCCA | 1 cut(s) | 399 |
| BanI | GGYRCC | 1 cut(s) | 3278 |
| BanII | GRGCYC | 1 cut(s) | 3378 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1968, 2000 |
| BbsI | GAAGAC | 4 cut(s) | 1311, 1983, 2946, 3428 |
| Bbv12I | GWGCWC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| BccI | CCATC | 7 cut(s) | 67, 95, 204, 397, 442, 1376, 2339 |
| BceAI | ACGGC | 1 cut(s) | 1888 |
| BclI | TGATCA | 1 cut(s) | 619 |
| BcnI | CCSGG | 3 cut(s) | 586, 1632, 1633 |
| BcoDI | GTCTC | 7 cut(s) | 647, 1809, 2344, 2428, 2985, 3128, 3242 |
| BfaI | CTAG | 9 cut(s) | 284, 875, 1022, 1197, 1844, 1892, 1928, 3197, 3314 |
| BfmI | CTRYAG | 5 cut(s) | 34, 546, 1037, 2641, 3067 |
| BfrI | CTTAAG | 1 cut(s) | 3077 |
| BfuAI | ACCTGC | 2 cut(s) | 283, 3307 |
| BglII | AGATCT | 7 cut(s) | 598, 1116, 1846, 2526, 2739, 2952, 3199 |
| BlpI | GCTNAGC | 1 cut(s) | 959 |
| BmcAI | AGTACT | 2 cut(s) | 1192, 3195 |
| Bme1390I | CCNGG | 3 cut(s) | 586, 1632, 1633 |
| Bme18I | GGWCC | 3 cut(s) | 272, 630, 1275 |
| BmeT110I | CYCGRG | 1 cut(s) | 1631 |
| BmgT120I | GGNCC | 3 cut(s) | 272, 630, 1275 |
| BmiI | GGNNCC | 5 cut(s) | 1276, 2535, 2748, 3074, 3280 |
| BmrFI | CCNGG | 3 cut(s) | 586, 1632, 1633 |
| BmrI | ACTGGG | 3 cut(s) | 1318, 1397, 3374 |
| BmsI | GCATC | 6 cut(s) | 460, 523, 747, 1042, 1827, 3315 |
| BmuI | ACTGGG | 3 cut(s) | 1318, 1397, 3374 |
| BpiI | GAAGAC | 4 cut(s) | 1311, 1983, 2946, 3428 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2576, 2608, 2789, 2821 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3059 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 959 |
| Bpu14I | TTCGAA | 1 cut(s) | 949 |
| BpuEI | CTTGAG | 6 cut(s) | 362, 2156, 2324, 2888, 3188, 3387 |
| BpuMI | CCSGG | 3 cut(s) | 586, 1632, 1633 |
| Bsa29I | ATCGAT | 1 cut(s) | 510 |
| BsaAI | YACGTR | 1 cut(s) | 3453 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1668, 3265 |
| BsaJI | CCNNGG | 5 cut(s) | 181, 1477, 1631, 1825, 2111 |
| BsaWI | WCCGGW | 2 cut(s) | 727, 3370 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1681, 1711, 3360, 3390 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 132, 133, 286, 970, 1638, 1725, 2460, 2646 |
| Bse1I | ACTGG | 4 cut(s) | 1054, 1313, 1392, 3380 |
| Bse3DI | GCAATG | 1 cut(s) | 3254 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1668, 3265 |
| BseCI | ATCGAT | 1 cut(s) | 510 |
| BseDI | CCNNGG | 5 cut(s) | 181, 1477, 1631, 1825, 2111 |
| BseGI | GGATG | 9 cut(s) | 364, 475, 538, 650, 1423, 1450, 1663, 1669, 3088 |
| BseJI | GATNNNNATC | 2 cut(s) | 1668, 3265 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 132, 133, 286, 970, 1638, 1725, 2460, 2646 |
| BseMI | GCAATG | 1 cut(s) | 3254 |
| BseMII | CTCAG | 5 cut(s) | 913, 973, 2013, 2379, 2949 |
| BseNI | ACTGG | 4 cut(s) | 1054, 1313, 1392, 3380 |
| BseRI | GAGGAG | 1 cut(s) | 273 |
| BseSI | GKGCMC | 4 cut(s) | 522, 2073, 2504, 2717 |
| BsgI | GTGCAG | 1 cut(s) | 2350 |
| Bsh1236I | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| BshFI | GGCC | 2 cut(s) | 399, 1028 |
| BshNI | GGYRCC | 1 cut(s) | 3278 |
| BshVI | ATCGAT | 1 cut(s) | 510 |
| BsiHKAI | GWGCWC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1631 |
| BsiSI | CCGG | 5 cut(s) | 585, 688, 728, 1632, 3371 |
| BslFI | GGGAC | 3 cut(s) | 601, 3010, 3071 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 132, 133, 286, 970, 1638, 1725, 2460, 2646 |
| BsmAI | GTCTC | 7 cut(s) | 647, 1809, 2344, 2428, 2985, 3128, 3242 |
| BsmFI | GGGAC | 3 cut(s) | 601, 3010, 3071 |
| BsmI | GAATGC | 1 cut(s) | 717 |
| BsnI | GGCC | 2 cut(s) | 399, 1028 |
| BsoBI | CYCGRG | 1 cut(s) | 1631 |
| Bsp119I | TTCGAA | 1 cut(s) | 949 |
| Bsp1286I | GDGCHC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 959 |
| Bsp19I | CCATGG | 1 cut(s) | 1477 |
| BspACI | CCGC | 8 cut(s) | 467, 1025, 1229, 1493, 1655, 1825, 1827, 3213 |
| BspANI | GGCC | 2 cut(s) | 399, 1028 |
| BspCNI | CTCAG | 5 cut(s) | 912, 972, 2014, 2380, 2950 |
| BspDI | ATCGAT | 1 cut(s) | 510 |
| BspFNI | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| BspHI | TCATGA | 2 cut(s) | 12, 1540 |
| BspLI | GGNNCC | 5 cut(s) | 1276, 2535, 2748, 3074, 3280 |
| BspMAI | CTGCAG | 4 cut(s) | 38, 550, 2645, 3071 |
| BspMI | ACCTGC | 2 cut(s) | 283, 3307 |
| BspPI | GGATC | 3 cut(s) | 698, 943, 1622 |
| BspQI | GCTCTTC | 2 cut(s) | 2577, 2790 |
| BspT104I | TTCGAA | 1 cut(s) | 949 |
| BspT107I | GGYRCC | 1 cut(s) | 3278 |
| BspTI | CTTAAG | 1 cut(s) | 3077 |
| BsrDI | GCAATG | 1 cut(s) | 3254 |
| BsrI | ACTGG | 4 cut(s) | 1054, 1313, 1392, 3380 |
| BssECI | CCNNGG | 5 cut(s) | 181, 1477, 1631, 1825, 2111 |
| BssT1I | CCWWGG | 3 cut(s) | 181, 1477, 2111 |
| Bst4CI | ACNGT | 7 cut(s) | 745, 796, 1041, 1102, 1190, 3140, 3427 |
| Bst6I | CTCTTC | 6 cut(s) | 817, 1101, 1676, 1866, 2577, 2790 |
| BstAFI | CTTAAG | 1 cut(s) | 3077 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 74, 1579 |
| BstBAI | YACGTR | 1 cut(s) | 3453 |
| BstBI | TTCGAA | 1 cut(s) | 949 |
| BstC8I | GCNNGC | 6 cut(s) | 736, 1173, 2193, 2641, 3304, 3353 |
| BstDSI | CCRYGG | 2 cut(s) | 1477, 1825 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 284, 2644 |
| BstF5I | GGATG | 9 cut(s) | 364, 475, 538, 650, 1423, 1450, 1663, 1669, 3088 |
| BstFNI | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| BstMAI | GTCTC | 7 cut(s) | 647, 1809, 2344, 2428, 2985, 3128, 3242 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 74, 1226, 1579, 1824, 1942, 3040, 3382 |
| BstNSI | RCATGY | 2 cut(s) | 1175, 1428 |
| BstSCI | CCNGG | 3 cut(s) | 584, 1630, 1631 |
| BstSFI | CTRYAG | 5 cut(s) | 34, 546, 1037, 2641, 3067 |
| BstSLI | GKGCMC | 4 cut(s) | 522, 2073, 2504, 2717 |
| BstUI | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| BstV2I | GAAGAC | 4 cut(s) | 1311, 1983, 2946, 3428 |
| BstX2I | RGATCY | 8 cut(s) | 598, 1116, 1627, 1846, 2526, 2739, 2952, 3199 |
| BstYI | RGATCY | 8 cut(s) | 598, 1116, 1627, 1846, 2526, 2739, 2952, 3199 |
| Bsu15I | ATCGAT | 1 cut(s) | 510 |
| BsuRI | GGCC | 2 cut(s) | 399, 1028 |
| BsuTUI | ATCGAT | 1 cut(s) | 510 |
| BtgI | CCRYGG | 2 cut(s) | 1477, 1825 |
| BtsCI | GGATG | 9 cut(s) | 364, 475, 538, 650, 1423, 1450, 1663, 1669, 3088 |
| BtsI | GCAGTG | 1 cut(s) | 2230 |
| BtsIMutI | CAGTG | 6 cut(s) | 741, 1047, 2230, 2502, 2715, 3387 |
| BveI | ACCTGC | 2 cut(s) | 283, 3307 |
| Cac8I | GCNNGC | 6 cut(s) | 736, 1173, 2193, 2641, 3304, 3353 |
| CaiI | CAGNNNCTG | 3 cut(s) | 74, 77, 1496 |
| CciI | TCATGA | 2 cut(s) | 12, 1540 |
| Cfr13I | GGNCC | 3 cut(s) | 272, 630, 1275 |
| Cfr42I | CCGCGG | 1 cut(s) | 1828 |
| Cfr9I | CCCGGG | 1 cut(s) | 1631 |
| ClaI | ATCGAT | 1 cut(s) | 510 |
| CseI | GACGC | 3 cut(s) | 740, 1254, 1491 |
| Csp6I | GTAC | 5 cut(s) | 443, 1191, 1676, 3194, 3208 |
| CviQI | GTAC | 5 cut(s) | 443, 1191, 1676, 3194, 3208 |
| DraI | TTTAAA | 2 cut(s) | 663, 2932 |
| DraIII | CACNNNGTG | 1 cut(s) | 351 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2442 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2442 |
| EaeI | YGGCCR | 2 cut(s) | 397, 1026 |
| Eam1104I | CTCTTC | 6 cut(s) | 817, 1101, 1676, 1866, 2577, 2790 |
| EarI | CTCTTC | 6 cut(s) | 817, 1101, 1676, 1866, 2577, 2790 |
| Ecl136II | GAGCTC | 1 cut(s) | 3376 |
| Eco130I | CCWWGG | 3 cut(s) | 181, 1477, 2111 |
| Eco24I | GRGCYC | 1 cut(s) | 3378 |
| Eco47I | GGWCC | 3 cut(s) | 272, 630, 1275 |
| Eco53kI | GAGCTC | 1 cut(s) | 3376 |
| Eco57I | CTGAAG | 5 cut(s) | 200, 236, 1700, 2055, 3440 |
| Eco88I | CYCGRG | 1 cut(s) | 1631 |
| EcoICRI | GAGCTC | 1 cut(s) | 3376 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 284, 2644 |
| EcoO109I | RGGNCCY | 2 cut(s) | 272, 1275 |
| EcoT14I | CCWWGG | 3 cut(s) | 181, 1477, 2111 |
| EcoT22I | ATGCAT | 2 cut(s) | 475, 1575 |
| EcoT38I | GRGCYC | 1 cut(s) | 3378 |
| ErhI | CCWWGG | 3 cut(s) | 181, 1477, 2111 |
| FaqI | GGGAC | 3 cut(s) | 601, 3010, 3071 |
| FauNDI | CATATG | 2 cut(s) | 27, 1941 |
| FbaI | TGATCA | 1 cut(s) | 619 |
| FblI | GTMKAC | 1 cut(s) | 2446 |
| FokI | GGATG | 9 cut(s) | 371, 482, 545, 637, 1430, 1457, 1670, 1676, 3095 |
| FriOI | GRGCYC | 1 cut(s) | 3378 |
| FspBI | CTAG | 9 cut(s) | 284, 875, 1022, 1197, 1844, 1892, 1928, 3197, 3314 |
| HaeIII | GGCC | 2 cut(s) | 399, 1028 |
| HapII | CCGG | 5 cut(s) | 585, 688, 728, 1632, 3371 |
| HgaI | GACGC | 3 cut(s) | 740, 1254, 1491 |
| HincII | GTYRAC | 2 cut(s) | 45, 1516 |
| HindII | GTYRAC | 2 cut(s) | 45, 1516 |
| HindIII | AAGCTT | 4 cut(s) | 825, 1964, 2135, 3041 |
| HinfI | GANTC | 6 cut(s) | 647, 704, 1059, 1830, 2246, 2443 |
| HpaI | GTTAAC | 1 cut(s) | 45 |
| HpaII | CCGG | 5 cut(s) | 585, 688, 728, 1632, 3371 |
| HphI | GGTGA | 6 cut(s) | 98, 179, 717, 1783, 1825, 2390 |
| Hpy166II | GTNNAC | 9 cut(s) | 45, 520, 1516, 1993, 2071, 2093, 2447, 2502, 2715 |
| Hpy188I | TCNGA | 9 cut(s) | 164, 219, 255, 439, 906, 2023, 2344, 2389, 2959 |
| Hpy8I | GTNNAC | 9 cut(s) | 45, 520, 1516, 1993, 2071, 2093, 2447, 2502, 2715 |
| Hpy99I | CGWCG | 1 cut(s) | 135 |
| HpyCH4III | ACNGT | 7 cut(s) | 745, 796, 1041, 1102, 1190, 3140, 3427 |
| HpyCH4IV | ACGT | 4 cut(s) | 493, 1018, 2095, 3452 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 74, 1226, 1579, 1824, 1942, 3040, 3382 |
| HpySE526I | ACGT | 4 cut(s) | 493, 1018, 2095, 3452 |
| Ksp22I | TGATCA | 1 cut(s) | 619 |
| KspAI | GTTAAC | 1 cut(s) | 45 |
| KspI | CCGCGG | 1 cut(s) | 1828 |
| LguI | GCTCTTC | 2 cut(s) | 2577, 2790 |
| LmnI | GCTCC | 4 cut(s) | 2533, 2746, 3373, 3381 |
| LweI | GCATC | 6 cut(s) | 460, 523, 747, 1042, 1827, 3315 |
| MaeI | CTAG | 9 cut(s) | 284, 875, 1022, 1197, 1844, 1892, 1928, 3197, 3314 |
| MaeII | ACGT | 4 cut(s) | 493, 1018, 2095, 3452 |
| MaeIII | GTNAC | 3 cut(s) | 1376, 1685, 1757 |
| MfeI | CAATTG | 1 cut(s) | 1701 |
| MflI | RGATCY | 8 cut(s) | 598, 1116, 1627, 1846, 2526, 2739, 2952, 3199 |
| MhlI | GDGCHC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| MlsI | TGGCCA | 1 cut(s) | 399 |
| MluI | ACGCGT | 1 cut(s) | 1246 |
| MluNI | TGGCCA | 1 cut(s) | 399 |
| MlyI | GAGTC | 1 cut(s) | 2452 |
| MmeI | TCCRAC | 1 cut(s) | 655 |
| Mox20I | TGGCCA | 1 cut(s) | 399 |
| Mph1103I | ATGCAT | 2 cut(s) | 475, 1575 |
| MroXI | GAANNNNTTC | 4 cut(s) | 2650, 2730, 2863, 3012 |
| MscI | TGGCCA | 1 cut(s) | 399 |
| MslI | CAYNNNNRTG | 3 cut(s) | 201, 1568, 1753 |
| Msp20I | TGGCCA | 1 cut(s) | 399 |
| MspA1I | CMGCKG | 4 cut(s) | 74, 1493, 1827, 3213 |
| MspCI | CTTAAG | 1 cut(s) | 3077 |
| MspI | CCGG | 5 cut(s) | 585, 688, 728, 1632, 3371 |
| MspR9I | CCNGG | 3 cut(s) | 586, 1632, 1633 |
| MunI | CAATTG | 1 cut(s) | 1701 |
| Mva1269I | GAATGC | 1 cut(s) | 717 |
| MvnI | CGCG | 4 cut(s) | 467, 1248, 1655, 1827 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 74, 1226, 1579, 1824, 1942, 3040, 3382 |
| NciI | CCSGG | 3 cut(s) | 586, 1632, 1633 |
| NcoI | CCATGG | 1 cut(s) | 1477 |
| NdeI | CATATG | 2 cut(s) | 27, 1941 |
| NlaIV | GGNNCC | 5 cut(s) | 1276, 2535, 2748, 3074, 3280 |
| NmuCI | GTSAC | 1 cut(s) | 1757 |
| NsiI | ATGCAT | 2 cut(s) | 475, 1575 |
| NspI | RCATGY | 2 cut(s) | 1175, 1428 |
| NspV | TTCGAA | 1 cut(s) | 949 |
| PaeI | GCATGC | 1 cut(s) | 1175 |
| PagI | TCATGA | 2 cut(s) | 12, 1540 |
| PciSI | GCTCTTC | 2 cut(s) | 2577, 2790 |
| PctI | GAATGC | 1 cut(s) | 717 |
| PdmI | GAANNNNTTC | 4 cut(s) | 2650, 2730, 2863, 3012 |
| PfeI | GAWTC | 5 cut(s) | 647, 704, 1059, 1830, 2246 |
| PflFI | GACNNNGTC | 1 cut(s) | 3427 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2460 |
| PfoI | TCCNGGA | 1 cut(s) | 584 |
| PleI | GAGTC | 1 cut(s) | 2451 |
| PpsI | GAGTC | 1 cut(s) | 2451 |
| Ppu21I | YACGTR | 1 cut(s) | 3453 |
| PpuMI | RGGWCCY | 2 cut(s) | 272, 1275 |
| Psp124BI | GAGCTC | 1 cut(s) | 3378 |
| Psp1406I | AACGTT | 2 cut(s) | 493, 2095 |
| Psp5II | RGGWCCY | 2 cut(s) | 272, 1275 |
| PspN4I | GGNNCC | 5 cut(s) | 1276, 2535, 2748, 3074, 3280 |
| PspPI | GGNCC | 3 cut(s) | 272, 630, 1275 |
| PspPPI | RGGWCCY | 2 cut(s) | 272, 1275 |
| PstI | CTGCAG | 4 cut(s) | 38, 550, 2645, 3071 |
| PstNI | CAGNNNCTG | 3 cut(s) | 74, 77, 1496 |
| PsuI | RGATCY | 8 cut(s) | 598, 1116, 1627, 1846, 2526, 2739, 2952, 3199 |
| PsyI | GACNNNGTC | 1 cut(s) | 3427 |
| PvuII | CAGCTG | 1 cut(s) | 74 |
| RsaI | GTAC | 5 cut(s) | 444, 1192, 1677, 3195, 3209 |
| RsaNI | GTAC | 5 cut(s) | 443, 1191, 1676, 3194, 3208 |
| RseI | CAYNNNNRTG | 3 cut(s) | 201, 1568, 1753 |
| SacI | GAGCTC | 1 cut(s) | 3378 |
| SacII | CCGCGG | 1 cut(s) | 1828 |
| SapI | GCTCTTC | 2 cut(s) | 2577, 2790 |
| Sau96I | GGNCC | 3 cut(s) | 272, 630, 1275 |
| ScaI | AGTACT | 2 cut(s) | 1192, 3195 |
| SchI | GAGTC | 1 cut(s) | 2452 |
| ScrFI | CCNGG | 3 cut(s) | 586, 1632, 1633 |
| SduI | GDGCHC | 5 cut(s) | 522, 2073, 2504, 2717, 3378 |
| SfaNI | GCATC | 6 cut(s) | 460, 523, 747, 1042, 1827, 3315 |
| SfcI | CTRYAG | 5 cut(s) | 34, 546, 1037, 2641, 3067 |
| Sfr303I | CCGCGG | 1 cut(s) | 1828 |
| SfuI | TTCGAA | 1 cut(s) | 949 |
| SgrBI | CCGCGG | 1 cut(s) | 1828 |
| SinI | GGWCC | 3 cut(s) | 272, 630, 1275 |
| SmaI | CCCGGG | 1 cut(s) | 1633 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 201, 1568, 1753 |
| SmlI | CTYRAG | 7 cut(s) | 377, 2171, 2303, 2903, 3077, 3203, 3402 |
| SmoI | CTYRAG | 7 cut(s) | 377, 2171, 2303, 2903, 3077, 3203, 3402 |
| SphI | GCATGC | 1 cut(s) | 1175 |
| SsiI | CCGC | 8 cut(s) | 467, 1025, 1229, 1493, 1655, 1825, 1827, 3213 |
| SspI | AATATT | 4 cut(s) | 121, 1812, 2200, 2269 |
| SspMI | CTAG | 9 cut(s) | 284, 875, 1022, 1197, 1844, 1892, 1928, 3197, 3314 |
| SstI | GAGCTC | 1 cut(s) | 3378 |
| StyD4I | CCNGG | 3 cut(s) | 584, 1630, 1631 |
| StyI | CCWWGG | 3 cut(s) | 181, 1477, 2111 |
| TaaI | ACNGT | 7 cut(s) | 745, 796, 1041, 1102, 1190, 3140, 3427 |
| TaiI | ACGT | 4 cut(s) | 496, 1021, 2098, 3455 |
| TaqI | TCGA | 7 cut(s) | 294, 510, 645, 693, 949, 2814, 3006 |
| TatI | WGTACW | 4 cut(s) | 1190, 1675, 3193, 3207 |
| TauI | GCSGC | 2 cut(s) | 1028, 1496 |
| TfiI | GAWTC | 5 cut(s) | 647, 704, 1059, 1830, 2246 |
| TscAI | CASTG | 6 cut(s) | 748, 1054, 2230, 2509, 2722, 3387 |
| TseFI | GTSAC | 1 cut(s) | 1757 |
| Tsp45I | GTSAC | 1 cut(s) | 1757 |
| TspGWI | ACGGA | 5 cut(s) | 471, 605, 1570, 1654, 1708 |
| TspMI | CCCGGG | 1 cut(s) | 1631 |
| TspRI | CASTG | 6 cut(s) | 748, 1054, 2230, 2509, 2722, 3387 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3427 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2460 |
| Vha464I | CTTAAG | 1 cut(s) | 3077 |
| VneI | GTGCAC | 4 cut(s) | 518, 2069, 2500, 2713 |
| VpaK11BI | GGWCC | 3 cut(s) | 272, 630, 1275 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 284, 2644 |
| XapI | RAATTY | 8 cut(s) | 818, 1337, 1895, 2106, 2212, 2560, 2773, 3433 |
| XbaI | TCTAGA | 2 cut(s) | 283, 1843 |
| XceI | RCATGY | 2 cut(s) | 1175, 1428 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 352, 2457 |
| XmaI | CCCGGG | 1 cut(s) | 1631 |
| XmiI | GTMKAC | 1 cut(s) | 2446 |
| XmnI | GAANNNNTTC | 4 cut(s) | 2650, 2730, 2863, 3012 |
| XspI | CTAG | 9 cut(s) | 284, 875, 1022, 1197, 1844, 1892, 1928, 3197, 3314 |
| ZrmI | AGTACT | 2 cut(s) | 1192, 3195 |
| Zsp2I | ATGCAT | 2 cut(s) | 475, 1575 |