Rmu_ssc0000042.1_g000020
NBS-LRR Family

Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000042.1
Physical Location & Seq
Reverse (-)
102035 .. 103890
1856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000042.1_g000020.1.cds

Sequence Viewer

Length: 1671 bp
atggcttcttcttcttctcctcctgcgcatgcctttaagtatgatgtctttcttagtttccgaggggaggacacccgcaatacttttaccagtcatcttcatgccgctttagtgcagaagaaaatcgaaacctacatagattacgaacttgtgagaggagaggaaattgcaccggcccttctcaaagcaatagaggaatcgaagctttcggtggtcattttgtcacaagactatgcttcttcaacatggtgcttggacgaacttgcgcatattttggaatgcaaggaaagacacggacagattgttatacccattttttacagaacagatccatcacatgtacgccaccagagggagagttatgcagctgcatttgttcaacatgaaaaacgtttcaaggacaaggtgctcaagtggagggatgctttgacaaaagcatccaaactagcagggtttgattcacgcaatatcagccttgaatccgaattagtggagttagtcgtcaaagatattgtgaagaagttgagtcgtgaatgctcaagcgatttaaagggtctggttggaattgaaagtcgcatccagcaactcgagtcattgttatgcattgatgtagaagatgttcgtgttcgcactgttggtatttggggtatgggtggtgttggcaagaccacccttgccggtgttgtattcaaccgactctcatctcaattcgaagcttcctatttccttgctaatgtcagggaaaaatatggcaaagatggaccacaaggtttgcgagatgaactttttcgcaacttattgaaggatgaaagtctaaggatcggcactccatctataggatttactttaaccaaacagaggctctcccgtacaaaggtcctcgttgtgcttgatgatgtgaatgatgttaggcaactagaaactttagttggtgatcaggttcaatttggaccgagattagatctagagaattgcaagcgccttgaatctttgcccaagctcccatgtcttctagaattgatatttgcaagtggctgcaagagattgaagacagtgtctgggttcacgactgcactcacagaaggtttggatcgaacatttctttccacgaggcatatatttagtaactgcgtaagtttggatgagaatgcaaggaggaacataatggattatgcacatcttagaaataaggcaacagctcgtcatccggatccgtaccaaatgaggtacgaagcaacatgtccgggaaatgaaattccaaaatgggtgagcaatcaaatggaggggtcttcgatagatatcaagcttcctctacattggtctgaagatgcagactttttgggtttagctttctgcgttgttgttgacttctctaaagtagaaaattatgcgacatgtcggggtgaatccattttcaaaaccgaaaatggtgaaagccatacctttaggagctattttcagagcgatttgttccgttgtgatgacgacaactcagatcacctggtgttgtggtacgattcccttgggtcggtgaggtccactccttattccaatgccactcaagcctcttttcatttctttgtacacagctttgatggaaagcgactgcgcgagaatccggtgaaaaggtgtggggtaagccttgagtatggggaagtagaatcattataa

Protein Analysis

556

Amino Acids

63.07

Weight (kDa)

6.38

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1669
Acc16I TGCGCA 2 cut(s) 27, 267
AccII CGCG 1 cut(s) 1611
AccIII TCCGGA 1 cut(s) 1207
AciI CCGC 2 cut(s) 76, 105
AclI AACGTT 1 cut(s) 391
AclWI GGATC 5 cut(s) 323, 827, 1098, 1205, 1218
AcsI RAATTY 1 cut(s) 1254
AcuI CTGAAG 1 cut(s) 1344
AdeI CACNNNGTG 1 cut(s) 1504
AfaI GTAC 6 cut(s) 342, 871, 1217, 1229, 1514, 1584
AfiI CCNNNNNNNGG 6 cut(s) 67, 352, 836, 858, 874, 1528
AflIII ACRYGT 3 cut(s) 337, 1238, 1394
AjnI CCWGG 1 cut(s) 1500
AjuI GAANNNNNNNTTGG 2 cut(s) 912, 944
AluBI AGCT 9 cut(s) 205, 368, 716, 1000, 1199, 1306, 1349, 1452, 1590
AluI AGCT 9 cut(s) 205, 368, 716, 1000, 1199, 1306, 1349, 1452, 1590
Alw21I GWGCWC 1 cut(s) 411
AlwI GGATC 5 cut(s) 323, 827, 1098, 1205, 1218
AlwNI CAGNNNCTG 1 cut(s) 1058
Ama87I CYCGRG 1 cut(s) 587
Aor13HI TCCGGA 1 cut(s) 1207
AoxI GGCC 1 cut(s) 174
ApeKI GCWGC 3 cut(s) 365, 368, 1035
ApoI RAATTY 1 cut(s) 1254
Asp700I GAANNNNTTC 2 cut(s) 618, 786
AspLEI GCGC 4 cut(s) 28, 268, 981, 1611
AspS9I GGNCC 5 cut(s) 175, 761, 877, 950, 1536
AsuC2I CCSGG 1 cut(s) 1245
AsuHPI GGTGA 7 cut(s) 944, 1279, 1415, 1442, 1490, 1543, 1633
AsuII TTCGAA 1 cut(s) 711
AvaI CYCGRG 1 cut(s) 587
AvaII GGWCC 4 cut(s) 761, 877, 950, 1536
BamHI GGATCC 1 cut(s) 1210
BauI CACGAG 1 cut(s) 1108
BbsI GAAGAC 3 cut(s) 1001, 1055, 1281
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 3 cut(s) 355, 377, 1022
BccI CCATC 4 cut(s) 340, 752, 838, 1589
BciT130I CCWGG 1 cut(s) 1502
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 1 cut(s) 1245
BfaI CTAG 4 cut(s) 446, 917, 965, 1013
BfmI CTRYAG 1 cut(s) 834
BfoI RGCGCY 1 cut(s) 982
BglII AGATCT 1 cut(s) 961
BisI GCNGC 4 cut(s) 105, 366, 369, 1036
BlsI GCNGC 4 cut(s) 106, 367, 370, 1037
Bme1390I CCNGG 2 cut(s) 1245, 1502
Bme18I GGWCC 4 cut(s) 761, 877, 950, 1536
BmeT110I CYCGRG 1 cut(s) 587
BmgT120I GGNCC 5 cut(s) 175, 761, 877, 950, 1536
BmiI GGNNCC 1 cut(s) 1212
BmrFI CCNGG 2 cut(s) 1245, 1502
BmsI GCATC 4 cut(s) 412, 446, 585, 1318
BpiI GAAGAC 3 cut(s) 1001, 1055, 1281
BplI GAGNNNNNCTC 2 cut(s) 1525, 1557
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 4 cut(s) 395, 523, 1545, 1664
BpuMI CCSGG 1 cut(s) 1245
BsaBI GATNNNNATC 1 cut(s) 1298
BsaJI CCNNGG 2 cut(s) 61, 1522
BsaWI WCCGGW 2 cut(s) 1207, 1618
Bsc4I CCNNNNNNNGG 6 cut(s) 67, 352, 836, 858, 874, 1528
Bse118I RCCGGY 2 cut(s) 172, 677
Bse1I ACTGG 1 cut(s) 90
Bse8I GATNNNNATC 1 cut(s) 1298
BseAI TCCGGA 1 cut(s) 1207
BseBI CCWGG 1 cut(s) 1502
BseDI CCNNGG 2 cut(s) 61, 1522
BseGI GGATG 6 cut(s) 427, 437, 576, 811, 1147, 1204
BseJI GATNNNNATC 1 cut(s) 1298
BseLI CCNNNNNNNGG 6 cut(s) 67, 352, 836, 858, 874, 1528
BseMII CTCAG 1 cut(s) 1506
BseNI ACTGG 1 cut(s) 90
BseRI GAGGAG 2 cut(s) 9, 171
BseXI GCAGC 3 cut(s) 355, 377, 1022
BsgI GTGCAG 2 cut(s) 134, 1056
Bsh1236I CGCG 1 cut(s) 1611
BshFI GGCC 1 cut(s) 176
BsiHKAI GWGCWC 1 cut(s) 411
BsiHKCI CYCGRG 1 cut(s) 587
BsiSI CCGG 5 cut(s) 173, 678, 1208, 1244, 1619
BslI CCNNNNNNNGG 6 cut(s) 67, 352, 836, 858, 874, 1528
BsmI GAATGC 3 cut(s) 284, 539, 1153
BsnI GGCC 1 cut(s) 176
BsoBI CYCGRG 1 cut(s) 587
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 1 cut(s) 411
Bsp13I TCCGGA 1 cut(s) 1207
Bsp1407I TGTACA 1 cut(s) 1582
Bsp143I GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
BspACI CCGC 2 cut(s) 76, 105
BspANI GGCC 1 cut(s) 176
BspCNI CTCAG 1 cut(s) 1505
BspEI TCCGGA 1 cut(s) 1207
BspFNI CGCG 1 cut(s) 1611
BspLI GGNNCC 1 cut(s) 1212
BspPI GGATC 5 cut(s) 323, 827, 1098, 1205, 1218
BspT104I TTCGAA 1 cut(s) 711
BsrFI RCCGGY 2 cut(s) 172, 677
BsrGI TGTACA 1 cut(s) 1582
BsrI ACTGG 1 cut(s) 90
BssAI RCCGGY 2 cut(s) 172, 677
BssECI CCNNGG 2 cut(s) 61, 1522
BssMI GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
BssSI CACGAG 1 cut(s) 1108
BssT1I CCWWGG 1 cut(s) 1522
Bst2BI CACGAG 1 cut(s) 1108
Bst2UI CCWGG 1 cut(s) 1502
Bst4CI ACNGT 2 cut(s) 634, 1054
BstAUI TGTACA 1 cut(s) 1582
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 2 cut(s) 30, 977
BstDEI CTNAG 4 cut(s) 53, 815, 1181, 1492
BstF5I GGATG 6 cut(s) 427, 437, 576, 811, 1147, 1204
BstFNI CGCG 1 cut(s) 1611
BstH2I RGCGCY 1 cut(s) 982
BstHHI GCGC 4 cut(s) 28, 268, 981, 1611
BstKTI GATC 7 cut(s) 331, 822, 937, 964, 1093, 1213, 1498
BstMBI GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
BstMWI GCNNNNNNNGC 2 cut(s) 471, 1562
BstNI CCWGG 1 cut(s) 1502
BstNSI RCATGY 4 cut(s) 32, 341, 1242, 1398
BstSCI CCNGG 2 cut(s) 1243, 1500
BstSFI CTRYAG 1 cut(s) 834
BstUI CGCG 1 cut(s) 1611
BstV1I GCAGC 3 cut(s) 355, 377, 1022
BstV2I GAAGAC 3 cut(s) 1001, 1055, 1281
BstX2I RGATCY 3 cut(s) 328, 961, 1210
BstYI RGATCY 3 cut(s) 328, 961, 1210
BsuRI GGCC 1 cut(s) 176
BtsCI GGATG 6 cut(s) 427, 437, 576, 811, 1147, 1204
BtsIMutI CAGTG 2 cut(s) 630, 1059
Cac8I GCNNGC 2 cut(s) 30, 977
CaiI CAGNNNCTG 1 cut(s) 1058
CfoI GCGC 4 cut(s) 28, 268, 981, 1611
Cfr10I RCCGGY 2 cut(s) 172, 677
Cfr13I GGNCC 5 cut(s) 175, 761, 877, 950, 1536
CsiI ACCWGGT 1 cut(s) 1500
Csp6I GTAC 6 cut(s) 341, 870, 1216, 1228, 1513, 1583
CspCI CAANNNNNGTGG 2 cut(s) 753, 788
CviAII CATG 8 cut(s) 29, 101, 246, 338, 383, 1005, 1239, 1395
CviQI GTAC 6 cut(s) 341, 870, 1216, 1228, 1513, 1583
DdeI CTNAG 4 cut(s) 53, 815, 1181, 1492
DpnI GATC 7 cut(s) 330, 821, 936, 963, 1092, 1212, 1497
DpnII GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
DraI TTTAAA 1 cut(s) 549
DraIII CACNNNGTG 1 cut(s) 1504
Eco130I CCWWGG 1 cut(s) 1522
Eco32I GATATC 1 cut(s) 1300
Eco47I GGWCC 4 cut(s) 761, 877, 950, 1536
Eco57I CTGAAG 1 cut(s) 1344
Eco88I CYCGRG 1 cut(s) 587
EcoO109I RGGNCCY 1 cut(s) 877
EcoRII CCWGG 1 cut(s) 1500
EcoRV GATATC 1 cut(s) 1300
EcoT14I CCWWGG 1 cut(s) 1522
EcoT22I ATGCAT 1 cut(s) 605
ErhI CCWWGG 1 cut(s) 1522
FaeI CATG 8 cut(s) 32, 104, 249, 341, 386, 1008, 1242, 1398
FatI CATG 8 cut(s) 28, 100, 245, 337, 382, 1004, 1238, 1394
FauI CCCGC 1 cut(s) 83
FbaI TGATCA 1 cut(s) 934
Fnu4HI GCNGC 4 cut(s) 105, 366, 369, 1036
FokI GGATG 6 cut(s) 424, 434, 563, 818, 1154, 1191
Fsp4HI GCNGC 4 cut(s) 105, 366, 369, 1036
FspBI CTAG 4 cut(s) 446, 917, 965, 1013
FspI TGCGCA 2 cut(s) 27, 267
GlaI GCGC 4 cut(s) 27, 267, 980, 1610
GluI GCNGC 4 cut(s) 105, 366, 369, 1036
HaeII RGCGCY 1 cut(s) 982
HaeIII GGCC 1 cut(s) 176
HapII CCGG 5 cut(s) 173, 678, 1208, 1244, 1619
HhaI GCGC 4 cut(s) 28, 268, 981, 1611
Hin1II CATG 8 cut(s) 32, 104, 249, 341, 386, 1008, 1242, 1398
Hin6I GCGC 4 cut(s) 26, 266, 979, 1609
HinP1I GCGC 4 cut(s) 26, 266, 979, 1609
HincII GTYRAC 1 cut(s) 1366
HindII GTYRAC 1 cut(s) 1366
HindIII AAGCTT 3 cut(s) 203, 714, 1304
HpaII CCGG 5 cut(s) 173, 678, 1208, 1244, 1619
HphI GGTGA 7 cut(s) 944, 1279, 1415, 1442, 1490, 1543, 1633
Hpy166II GTNNAC 4 cut(s) 1065, 1366, 1539, 1585
Hpy188I TCNGA 5 cut(s) 62, 484, 1324, 1461, 1495
Hpy188III TCNNGA 5 cut(s) 530, 965, 1013, 1066, 1208
Hpy8I GTNNAC 4 cut(s) 1065, 1366, 1539, 1585
HpyAV CCTTC 3 cut(s) 188, 796, 1076
HpyCH4III ACNGT 2 cut(s) 634, 1054
HpyCH4IV ACGT 1 cut(s) 391
HpyF10VI GCNNNNNNNGC 2 cut(s) 471, 1562
HpyF3I CTNAG 4 cut(s) 53, 815, 1181, 1492
HpySE526I ACGT 1 cut(s) 391
Hsp92II CATG 8 cut(s) 32, 104, 249, 341, 386, 1008, 1242, 1398
HspAI GCGC 4 cut(s) 26, 266, 979, 1609
Kpn2I TCCGGA 1 cut(s) 1207
Ksp22I TGATCA 1 cut(s) 934
Kzo9I GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
LmnI GCTCC 2 cut(s) 1005, 1449
Lsp1109I GCAGC 3 cut(s) 355, 377, 1022
LweI GCATC 4 cut(s) 412, 446, 585, 1318
MabI ACCWGGT 1 cut(s) 1500
MaeI CTAG 4 cut(s) 446, 917, 965, 1013
MaeII ACGT 1 cut(s) 391
MaeIII GTNAC 2 cut(s) 222, 1124
MalI GATC 7 cut(s) 330, 821, 936, 963, 1092, 1212, 1497
MboI GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
MflI RGATCY 3 cut(s) 328, 961, 1210
MhlI GDGCHC 1 cut(s) 411
MluCI AATT 9 cut(s) 165, 485, 564, 707, 944, 970, 1016, 1254, 1384
MlyI GAGTC 3 cut(s) 535, 599, 690
MmeI TCCRAC 1 cut(s) 541
Mph1103I ATGCAT 1 cut(s) 605
MroI TCCGGA 1 cut(s) 1207
MroXI GAANNNNTTC 2 cut(s) 618, 786
MseI TTAA 3 cut(s) 36, 548, 848
MslI CAYNNNNRTG 2 cut(s) 99, 598
MspA1I CMGCKG 1 cut(s) 368
MspI CCGG 5 cut(s) 173, 678, 1208, 1244, 1619
MspR9I CCNGG 2 cut(s) 1245, 1502
Mva1269I GAATGC 3 cut(s) 284, 539, 1153
MvaI CCWGG 1 cut(s) 1502
MvnI CGCG 1 cut(s) 1611
MwoI GCNNNNNNNGC 2 cut(s) 471, 1562
NciI CCSGG 1 cut(s) 1245
NdeII GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
NlaIII CATG 8 cut(s) 32, 104, 249, 341, 386, 1008, 1242, 1398
NlaIV GGNNCC 1 cut(s) 1212
NmuCI GTSAC 1 cut(s) 222
NsbI TGCGCA 2 cut(s) 27, 267
NsiI ATGCAT 1 cut(s) 605
NspI RCATGY 4 cut(s) 32, 341, 1242, 1398
NspV TTCGAA 1 cut(s) 711
PaeI GCATGC 1 cut(s) 32
PaeR7I CTCGAG 1 cut(s) 587
PciI ACATGT 3 cut(s) 337, 1238, 1394
PctI GAATGC 3 cut(s) 284, 539, 1153
PdmI GAANNNNTTC 2 cut(s) 618, 786
PfeI GAWTC 8 cut(s) 197, 458, 479, 986, 1406, 1517, 1615, 1661
PflFI GACNNNGTC 1 cut(s) 1054
PfoI TCCNGGA 1 cut(s) 1243
PkrI GCNGC 4 cut(s) 106, 367, 370, 1037
PleI GAGTC 3 cut(s) 534, 598, 690
PpsI GAGTC 3 cut(s) 534, 598, 690
PpuMI RGGWCCY 1 cut(s) 877
PscI ACATGT 3 cut(s) 337, 1238, 1394
PsiI TTATAA 1 cut(s) 1669
Psp1406I AACGTT 1 cut(s) 391
Psp5II RGGWCCY 1 cut(s) 877
Psp6I CCWGG 1 cut(s) 1500
PspGI CCWGG 1 cut(s) 1500
PspN4I GGNNCC 1 cut(s) 1212
PspPI GGNCC 5 cut(s) 175, 761, 877, 950, 1536
PspPPI RGGWCCY 1 cut(s) 877
PspXI VCTCGAGB 1 cut(s) 587
PsrI GAACNNNNNNTAC 2 cut(s) 603, 635
PstNI CAGNNNCTG 1 cut(s) 1058
PsuI RGATCY 3 cut(s) 328, 961, 1210
PsyI GACNNNGTC 1 cut(s) 1054
PvuII CAGCTG 1 cut(s) 368
RsaI GTAC 6 cut(s) 342, 871, 1217, 1229, 1514, 1584
RsaNI GTAC 6 cut(s) 341, 870, 1216, 1228, 1513, 1583
RseI CAYNNNNRTG 2 cut(s) 99, 598
SaqAI TTAA 3 cut(s) 36, 548, 848
SatI GCNGC 4 cut(s) 105, 366, 369, 1036
Sau3AI GATC 7 cut(s) 328, 819, 934, 961, 1090, 1210, 1495
Sau96I GGNCC 5 cut(s) 175, 761, 877, 950, 1536
SchI GAGTC 3 cut(s) 535, 599, 690
ScrFI CCNGG 2 cut(s) 1245, 1502
SduI GDGCHC 1 cut(s) 411
SexAI ACCWGGT 1 cut(s) 1500
SfaNI GCATC 4 cut(s) 412, 446, 585, 1318
SfcI CTRYAG 1 cut(s) 834
Sfr274I CTCGAG 1 cut(s) 587
SfuI TTCGAA 1 cut(s) 711
SinI GGWCC 4 cut(s) 761, 877, 950, 1536
SlaI CTCGAG 1 cut(s) 587
SmiMI CAYNNNNRTG 2 cut(s) 99, 598
SmlI CTYRAG 5 cut(s) 410, 538, 587, 1560, 1643
SmoI CTYRAG 5 cut(s) 410, 538, 587, 1560, 1643
SphI GCATGC 1 cut(s) 32
Sse9I AATT 9 cut(s) 165, 485, 564, 707, 944, 970, 1016, 1254, 1384
SsiI CCGC 2 cut(s) 76, 105
SspMI CTAG 4 cut(s) 446, 917, 965, 1013
StyD4I CCNGG 2 cut(s) 1243, 1500
StyI CCWWGG 1 cut(s) 1522
TaaI ACNGT 2 cut(s) 634, 1054
TaiI ACGT 1 cut(s) 394
TaqI TCGA 6 cut(s) 126, 200, 588, 711, 1093, 1292
TaqII GACCGA 1 cut(s) 967
TasI AATT 9 cut(s) 165, 485, 564, 707, 944, 970, 1016, 1254, 1384
TatI WGTACW 1 cut(s) 1582
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 8 cut(s) 197, 458, 479, 986, 1406, 1517, 1615, 1661
Tru1I TTAA 3 cut(s) 36, 548, 848
Tru9I TTAA 3 cut(s) 36, 548, 848
TscAI CASTG 2 cut(s) 637, 1059
TseFI GTSAC 1 cut(s) 222
TseI GCWGC 3 cut(s) 365, 368, 1035
Tsp45I GTSAC 1 cut(s) 222
TspDTI ATGAA 6 cut(s) 89, 399, 795, 822, 1266, 1562
TspGWI ACGGA 3 cut(s) 309, 1203, 1463
TspRI CASTG 2 cut(s) 637, 1059
Tth111I GACNNNGTC 1 cut(s) 1054
VpaK11BI GGWCC 4 cut(s) 761, 877, 950, 1536
XapI RAATTY 1 cut(s) 1254
XbaI TCTAGA 2 cut(s) 964, 1012
XceI RCATGY 4 cut(s) 32, 341, 1242, 1398
XhoI CTCGAG 1 cut(s) 587
XmnI GAANNNNTTC 2 cut(s) 618, 786
XspI CTAG 4 cut(s) 446, 917, 965, 1013
Zsp2I ATGCAT 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.