pycom10g11640

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
15222761 .. 15226811
4051 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11640.1

Sequence Viewer

Length: 2259 bp
ATGGAGGTGATTGGGACTTCTTCTTCTGGTGCTGCTGATTCTGGTACTGCTGTTGATGATGTTAATATCCCCCCTCTTCGAGAAAAGTATGATGTGTTTATTAGTTTCAGAGGTGAGGACACCCGTCTTACTTTTACCAGCCATCTTTATGATGCCTTACTTTGCAAGAAAATCGAAACCTACATGGACTACAGGCTGGAGAGAGGAGACGAAATTGGACCCGCCCTACGAGAAGCAATAGAGAAATCAAGGCTTTCGGTTGACTACACGATCATTTTCTCCAAAAACTATGCGTCTTCCACATGGTGCTTGATTGAACTTGTGCATATACTCAAATGCAAAAAGAAAAATGACCAGATGGTTGTACCCATTTTTTATGACATCAGTCCATCAGAAGTGCGAAAACAAGAGGGGAGTTATGCAGATGCGTTTGCTGAACTTGAAAATCGTTTCAAGGACCGTATGGATAAGATGATCGAGTGGAAAGCTGCTTTGGTGGAAGCAACCAGTTTATCTGGGTTTGATTATTCAAACAAAAAAGGGACGGAGGCTGATTTTATTAAGGAAGTTGTGGAAGATATTTTAACGAAATTGAAACGTGAAACCTTATGTGATTTAAAGGGCATGGTTGGAATTGAAAGCCGCATCGAGCAAGTTGAATCGTTATTAAGCACTAATGATTGGAAAGGTGTTTGCACTGTAGGCATTTGGGGTATGGGTGGTATTGGAAAGACCACCCTTGCTAAGGCTGTGTTCAACAGACTCTCTTCTGAGTTCAAAGCTTGTTGTTTTCTTAACAACGTTAGGGAGAAGGCAGAGCAAACAGACGGAGTCGTTCAATTGCAAAAAACACTTCTTAGAGAGATCTTAAAGGAAGAAGATCTCTCCATAGATAAGAAGAATGTTAAAGAAAGGCTCGGCCGTACAAAGGTTCTCATTGTTTTTGATGATGTTAGTGACTGGAGGCAAATAAAAGATCTAGTTGGACACTACGAAGATGGAAGTAGAATCATCGTAACAAGTAGAGAACGGGGCGTACTCAAGAAAGCTGTTCGTGATGAAAAATATATATATGAGGTTCAGAAAATAAAAACTGATGACGCTCTTCGGCTCTTTCAAATTCATGCTTTCAAGGATAACTCTCCCAGAGAAGATTATACAGAGTTGTCGGCAAGGGTGGTAAAATATGCTGGAGGCATTCCACTGGCTCTTGAAGTTTTGGGTTCCTTATTCTTTGAATGTGAGAGCAAAGACGAGTGGGAAGAAGCATGGAGCACACTGAGAAATTATCCCAATGAAAAAATTCAAAATACGTTGAGAGTAAGCTATAATAGATTACCAAGAAATGCGCAGGAGGTATTTCTTGATATAGCATGCTTTTACAAAGGGTATCATATTGAAGATGTAAAAAAGATGGTAGACTTTGGCCAATGGCATGGTGGTTCATGTGCGGCAGATGGAATTAGAGTTCTCCGTGATAGGTCTCTCATATCGATTGCTTCGAAATGGAAAACCATAGATATGCATGATTTGGTACAAGAAATGGGCTGGTCAATTGTTCGCGAACAATGTATTGAAGAGCCCGGAAGACGCAGTAGGTTGTTCACTGATGAGGATATCTATCATGTATTGAAAAATAACACGGGAACTGAAAAGGTTCAAGCCATAATCTCTCCCTGGTCAAGGATTGGAGAGCAAAACTTGGATGGTGCAGACTTCAAAAAGATGTATAATATGAGATTGCTCAGTTTTAGTTCTTGGCAGTGGTGGGATTGCAAAATAAACCTTAAAACTCTCTTTCTTCCCAATTCTCTTCGTTATCTTTTCTGGAGGCAATATCCTTTGAAATCTTTGCCCCCAGAATTTTCTCTCGAAAATCTTGTTGAGCTTCATATGCCCAACAGCGACGTCACGCAACTTTGGGATGGAGGGCAGAATCCTATCAACTTAAAAGTGCTCAATCTTCGTTCCTCCTTATGTCTGACTGCACTTCCAAATCTCTTGGGGAGTCCAAATATCGAGCACATGGATCTTTCTGGATGTGAAAATTTGGTTGAAATTCCTGAGTCTTTTAAAAATCTTGACAAACTTACTTATCTTGATCTTTCATGGTGCAAGCGTCTCGAGTATCTTCCAAAGATGCCAGACAATATTGAATTCTTAAGATTACAAGGCAGTGGCATAAAGGAGTTGACGTCATCAGTTCGGTCTCATGAAAATCTGTTTGGTCTCATGAAAAAGTTTCTTCCTTGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

753

Amino Acids

86.63

Weight (kDa)

5.88

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 29 - 210 1.4e-49 TIR domain
TIR_2 PF13676 32 - 149 2.7e-11 TIR domain
NB-ARC PF00931 213 - 380 6.5e-21 NB-ARC domain
WHD_ROQ1 PF23282 449 - 523 2.1e-15 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1911, 2198
Acc16I TGCGCA 1 cut(s) 1350
AccI GTMKAC 1 cut(s) 1419
AccII CGCG 1 cut(s) 1563
AciI CCGC 3 cut(s) 222, 643, 1451
AclI AACGTT 1 cut(s) 801
AclWI GGATC 1 cut(s) 2037
AcoI YGGCCR 2 cut(s) 919, 1426
AcsI RAATTY 6 cut(s) 1119, 1302, 1862, 2047, 2058, 2156
AcyI GRCGYC 2 cut(s) 1908, 2195
AdeI CACNNNGTG 1 cut(s) 306
AfaI GTAC 5 cut(s) 46, 366, 925, 1038, 1536
AfiI CCNNNNNNNGG 3 cut(s) 745, 928, 1683
AflII CTTAAG 1 cut(s) 2161
AjnI CCWGG 1 cut(s) 1676
AjuI GAANNNNNNNTTGG 4 cut(s) 476, 508, 2208, 2240
AloI GAACNNNNNNTCC 2 cut(s) 1452, 1484
AluBI AGCT 5 cut(s) 488, 782, 1049, 1326, 1888
AluI AGCT 5 cut(s) 488, 782, 1049, 1326, 1888
Alw21I GWGCWC 3 cut(s) 1277, 1959, 2025
Alw26I GTCTC 5 cut(s) 201, 1488, 2126, 2214, 2234
AlwI GGATC 1 cut(s) 2037
Ama87I CYCGRG 1 cut(s) 2123
AoxI GGCC 2 cut(s) 919, 1426
ApeKI GCWGC 2 cut(s) 32, 488
ApoI RAATTY 6 cut(s) 1119, 1302, 1862, 2047, 2058, 2156
Asp700I GAANNNNTTC 2 cut(s) 1302, 1656
AspLEI GCGC 1 cut(s) 1351
AspS9I GGNCC 2 cut(s) 218, 457
AsuC2I CCSGG 1 cut(s) 1584
AsuHPI GGTGA 2 cut(s) 19, 125
AsuII TTCGAA 1 cut(s) 1502
AvaI CYCGRG 1 cut(s) 2123
AvaII GGWCC 2 cut(s) 218, 457
BaeI ACNNNNGTAYC 2 cut(s) 36, 69
BalI TGGCCA 1 cut(s) 1428
BanII GRGCYC 1 cut(s) 1584
BbsI GAAGAC 2 cut(s) 288, 1594
Bbv12I GWGCWC 3 cut(s) 1277, 1959, 2025
BbvI GCAGC 2 cut(s) 19, 475
BccI CCATC 8 cut(s) 150, 352, 397, 992, 1408, 1451, 1700, 1919
BceAI ACGGC 1 cut(s) 906
BcgI CGANNNNNNTGC 4 cut(s) 154, 188, 2104, 2138
BciT130I CCWGG 1 cut(s) 1678
BcnI CCSGG 1 cut(s) 1584
BcoDI GTCTC 5 cut(s) 201, 1488, 2126, 2214, 2234
BfaI CTAG 1 cut(s) 980
BfmI CTRYAG 2 cut(s) 190, 699
BfrI CTTAAG 1 cut(s) 2161
BglII AGATCT 3 cut(s) 864, 880, 976
BisI GCNGC 4 cut(s) 33, 489, 643, 1452
BlsI GCNGC 4 cut(s) 34, 490, 644, 1453
Bme1390I CCNGG 2 cut(s) 1584, 1678
Bme18I GGWCC 2 cut(s) 218, 457
BmeT110I CYCGRG 1 cut(s) 2123
BmgT120I GGNCC 2 cut(s) 218, 457
BmiI GGNNCC 2 cut(s) 220, 1225
BmrFI CCNGG 2 cut(s) 1584, 1678
BmsI GCATC 4 cut(s) 142, 415, 654, 2130
BoxI GACNNNNGTC 2 cut(s) 123, 384
BpiI GAAGAC 2 cut(s) 288, 1594
BpmI CTGGAG 4 cut(s) 218, 982, 1212, 1849
Bpu10I CCTNAGC 1 cut(s) 744
Bpu14I TTCGAA 1 cut(s) 1502
BpuEI CTTGAG 1 cut(s) 1025
BpuMI CCSGG 1 cut(s) 1584
Bsa29I ATCGAT 1 cut(s) 1493
BsaBI GATNNNNATC 1 cut(s) 1620
BsaHI GRCGYC 2 cut(s) 1908, 2195
BsaI GGTCTC 3 cut(s) 1488, 2214, 2234
BsaJI CCNNGG 2 cut(s) 1676, 2249
BsaXI ACNNNNNCTCC 2 cut(s) 2180, 2210
Bsc4I CCNNNNNNNGG 3 cut(s) 745, 928, 1683
Bse1I ACTGG 3 cut(s) 507, 965, 1209
Bse8I GATNNNNATC 1 cut(s) 1620
BseBI CCWGG 1 cut(s) 1678
BseCI ATCGAT 1 cut(s) 1493
BseDI CCNNGG 2 cut(s) 1676, 2249
BseGI GGATG 3 cut(s) 1711, 1930, 2045
BseJI GATNNNNATC 1 cut(s) 1620
BseLI CCNNNNNNNGG 3 cut(s) 745, 928, 1683
BseMII CTCAG 4 cut(s) 762, 1271, 1759, 2055
BseNI ACTGG 3 cut(s) 507, 965, 1209
BseRI GAGGAG 1 cut(s) 219
BseX3I CGGCCG 1 cut(s) 919
BseXI GCAGC 2 cut(s) 19, 475
BsgI GTGCAG 2 cut(s) 1731, 1971
Bsh1236I CGCG 1 cut(s) 1563
Bsh1285I CGRYCG 1 cut(s) 922
BshFI GGCC 2 cut(s) 921, 1428
BshVI ATCGAT 1 cut(s) 1493
BsiEI CGRYCG 1 cut(s) 922
BsiHKAI GWGCWC 3 cut(s) 1277, 1959, 2025
BsiHKCI CYCGRG 1 cut(s) 2123
BsiSI CCGG 1 cut(s) 1584
BslFI GGGAC 2 cut(s) 28, 556
BslI CCNNNNNNNGG 3 cut(s) 745, 928, 1683
BsmAI GTCTC 5 cut(s) 201, 1488, 2126, 2214, 2234
BsmBI CGTCTC 2 cut(s) 201, 2126
BsmFI GGGAC 2 cut(s) 28, 556
BsmI GAATGC 1 cut(s) 1197
BsnI GGCC 2 cut(s) 921, 1428
Bso31I GGTCTC 3 cut(s) 1488, 2214, 2234
BsoBI CYCGRG 1 cut(s) 2123
Bsp119I TTCGAA 1 cut(s) 1502
Bsp1286I GDGCHC 4 cut(s) 1277, 1584, 1959, 2025
Bsp143I GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
Bsp68I TCGCGA 1 cut(s) 1563
BspACI CCGC 3 cut(s) 222, 643, 1451
BspANI GGCC 2 cut(s) 921, 1428
BspCNI CTCAG 4 cut(s) 763, 1272, 1758, 2056
BspDI ATCGAT 1 cut(s) 1493
BspFNI CGCG 1 cut(s) 1563
BspHI TCATGA 2 cut(s) 2212, 2232
BspLI GGNNCC 2 cut(s) 220, 1225
BspPI GGATC 1 cut(s) 2037
BspQI GCTCTTC 2 cut(s) 1110, 1572
BspT104I TTCGAA 1 cut(s) 1502
BspTI CTTAAG 1 cut(s) 2161
BspTNI GGTCTC 3 cut(s) 1488, 2214, 2234
BsrI ACTGG 3 cut(s) 507, 965, 1209
BssECI CCNNGG 2 cut(s) 1676, 2249
BssMI GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
BssNI GRCGYC 2 cut(s) 1908, 2195
BssT1I CCWWGG 1 cut(s) 2249
Bst2UI CCWGG 1 cut(s) 1678
Bst4CI ACNGT 2 cut(s) 461, 700
Bst6I CTCTTC 5 cut(s) 81, 772, 1110, 1572, 1818
BstACI GRCGYC 2 cut(s) 1908, 2195
BstAFI CTTAAG 1 cut(s) 2161
BstBI TTCGAA 1 cut(s) 1502
BstC8I GCNNGC 2 cut(s) 1375, 2117
BstDEI CTNAG 6 cut(s) 744, 771, 857, 1280, 1745, 2064
BstENI CCTNNNNNAGG 2 cut(s) 743, 1681
BstF5I GGATG 3 cut(s) 1711, 1930, 2045
BstFNI CGCG 1 cut(s) 1563
BstHHI GCGC 1 cut(s) 1351
BstKTI GATC 7 cut(s) 273, 477, 867, 883, 979, 2032, 2104
BstMAI GTCTC 5 cut(s) 201, 1488, 2126, 2214, 2234
BstMBI GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
BstMCI CGRYCG 1 cut(s) 922
BstMWI GCNNNNNNNGC 2 cut(s) 702, 1894
BstNI CCWGG 1 cut(s) 1678
BstNSI RCATGY 1 cut(s) 1377
BstPAI GACNNNNGTC 2 cut(s) 123, 384
BstSCI CCNGG 2 cut(s) 1582, 1676
BstSFI CTRYAG 2 cut(s) 190, 699
BstUI CGCG 1 cut(s) 1563
BstV1I GCAGC 2 cut(s) 19, 475
BstV2I GAAGAC 2 cut(s) 288, 1594
BstX2I RGATCY 4 cut(s) 864, 880, 976, 2029
BstXI CCANNNNNNTGG 1 cut(s) 1436
BstYI RGATCY 4 cut(s) 864, 880, 976, 2029
BstZI CGGCCG 1 cut(s) 919
Bsu15I ATCGAT 1 cut(s) 1493
BsuRI GGCC 2 cut(s) 921, 1428
BsuTUI ATCGAT 1 cut(s) 1493
BtsCI GGATG 3 cut(s) 1711, 1930, 2045
BtsI GCAGTG 2 cut(s) 1769, 2182
BtsIMutI CAGTG 6 cut(s) 696, 1202, 1277, 1605, 1769, 2182
BtuMI TCGCGA 1 cut(s) 1563
Cac8I GCNNGC 2 cut(s) 1375, 2117
CciI TCATGA 2 cut(s) 2212, 2232
CfoI GCGC 1 cut(s) 1351
Cfr13I GGNCC 2 cut(s) 218, 457
ClaI ATCGAT 1 cut(s) 1493
CseI GACGC 4 cut(s) 282, 1109, 1599, 2108
Csp6I GTAC 5 cut(s) 45, 365, 924, 1037, 1535
CviQI GTAC 5 cut(s) 45, 365, 924, 1037, 1535
DdeI CTNAG 6 cut(s) 744, 771, 857, 1280, 1745, 2064
DpnI GATC 7 cut(s) 272, 476, 866, 882, 978, 2031, 2103
DpnII GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
DraI TTTAAA 2 cut(s) 618, 2074
DraIII CACNNNGTG 1 cut(s) 306
EaeI YGGCCR 2 cut(s) 919, 1426
EagI CGGCCG 1 cut(s) 919
Eam1104I CTCTTC 5 cut(s) 81, 772, 1110, 1572, 1818
EarI CTCTTC 5 cut(s) 81, 772, 1110, 1572, 1818
EclXI CGGCCG 1 cut(s) 919
Eco130I CCWWGG 1 cut(s) 2249
Eco24I GRGCYC 1 cut(s) 1584
Eco31I GGTCTC 3 cut(s) 1488, 2214, 2234
Eco32I GATATC 1 cut(s) 1618
Eco47I GGWCC 2 cut(s) 218, 457
Eco52I CGGCCG 1 cut(s) 919
Eco88I CYCGRG 1 cut(s) 2123
EcoNI CCTNNNNNAGG 2 cut(s) 743, 1681
EcoRI GAATTC 1 cut(s) 2156
EcoRII CCWGG 1 cut(s) 1676
EcoRV GATATC 1 cut(s) 1618
EcoT14I CCWWGG 1 cut(s) 2249
EcoT22I ATGCAT 1 cut(s) 1527
EcoT38I GRGCYC 1 cut(s) 1584
ErhI CCWWGG 1 cut(s) 2249
Esp3I CGTCTC 2 cut(s) 201, 2126
FaqI GGGAC 2 cut(s) 28, 556
FauI CCCGC 1 cut(s) 229
FauNDI CATATG 1 cut(s) 1893
FblI GTMKAC 1 cut(s) 1419
Fnu4HI GCNGC 4 cut(s) 33, 489, 643, 1452
FokI GGATG 3 cut(s) 1718, 1937, 2052
FriOI GRGCYC 1 cut(s) 1584
Fsp4HI GCNGC 4 cut(s) 33, 489, 643, 1452
FspBI CTAG 1 cut(s) 980
FspI TGCGCA 1 cut(s) 1350
GlaI GCGC 1 cut(s) 1350
GluI GCNGC 4 cut(s) 33, 489, 643, 1452
GsuI CTGGAG 4 cut(s) 218, 982, 1212, 1849
HaeIII GGCC 2 cut(s) 921, 1428
HapII CCGG 1 cut(s) 1584
HgaI GACGC 4 cut(s) 282, 1109, 1599, 2108
HhaI GCGC 1 cut(s) 1351
Hin1I GRCGYC 2 cut(s) 1908, 2195
Hin6I GCGC 1 cut(s) 1349
HinP1I GCGC 1 cut(s) 1349
HincII GTYRAC 2 cut(s) 262, 2193
HindII GTYRAC 2 cut(s) 262, 2193
HindIII AAGCTT 1 cut(s) 780
HinfI GANTC 8 cut(s) 38, 659, 762, 831, 1008, 1936, 2008, 2066
HpaII CCGG 1 cut(s) 1584
HphI GGTGA 2 cut(s) 19, 125
Hpy166II GTNNAC 4 cut(s) 262, 1420, 1605, 2193
Hpy188I TCNGA 5 cut(s) 110, 394, 772, 1083, 1983
Hpy8I GTNNAC 4 cut(s) 262, 1420, 1605, 2193
Hpy99I CGWCG 1 cut(s) 1910
HpyAV CCTTC 1 cut(s) 805
HpyCH4III ACNGT 2 cut(s) 461, 700
HpyCH4IV ACGT 5 cut(s) 598, 801, 1313, 1908, 2195
HpyF10VI GCNNNNNNNGC 2 cut(s) 702, 1894
HpyF3I CTNAG 6 cut(s) 744, 771, 857, 1280, 1745, 2064
HpySE526I ACGT 5 cut(s) 598, 801, 1313, 1908, 2195
Hsp92I GRCGYC 2 cut(s) 1908, 2195
HspAI GCGC 1 cut(s) 1349
Kzo9I GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
LguI GCTCTTC 2 cut(s) 1110, 1572
LmnI GCTCC 1 cut(s) 1272
Lsp1109I GCAGC 2 cut(s) 19, 475
LweI GCATC 4 cut(s) 142, 415, 654, 2130
MaeI CTAG 1 cut(s) 980
MaeII ACGT 5 cut(s) 598, 801, 1313, 1908, 2195
MaeIII GTNAC 3 cut(s) 956, 1015, 1909
MalI GATC 7 cut(s) 272, 476, 866, 882, 978, 2031, 2103
MboI GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
MfeI CAATTG 2 cut(s) 839, 1554
MflI RGATCY 4 cut(s) 864, 880, 976, 2029
MhlI GDGCHC 4 cut(s) 1277, 1584, 1959, 2025
MlsI TGGCCA 1 cut(s) 1428
MluNI TGGCCA 1 cut(s) 1428
MlyI GAGTC 4 cut(s) 756, 840, 2017, 2075
MmeI TCCRAC 2 cut(s) 610, 964
Mox20I TGGCCA 1 cut(s) 1428
Mph1103I ATGCAT 1 cut(s) 1527
MroXI GAANNNNTTC 2 cut(s) 1302, 1656
MscI TGGCCA 1 cut(s) 1428
MslI CAYNNNNRTG 2 cut(s) 147, 1520
Msp20I TGGCCA 1 cut(s) 1428
MspCI CTTAAG 1 cut(s) 2161
MspI CCGG 1 cut(s) 1584
MspR9I CCNGG 2 cut(s) 1584, 1678
MunI CAATTG 2 cut(s) 839, 1554
Mva1269I GAATGC 1 cut(s) 1197
MvaI CCWGG 1 cut(s) 1678
MvnI CGCG 1 cut(s) 1563
MwoI GCNNNNNNNGC 2 cut(s) 702, 1894
NciI CCSGG 1 cut(s) 1584
NdeI CATATG 1 cut(s) 1893
NdeII GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
NlaIV GGNNCC 2 cut(s) 220, 1225
NmeAIII GCCGAG 1 cut(s) 897
NmuCI GTSAC 2 cut(s) 956, 1909
NruI TCGCGA 1 cut(s) 1563
NsbI TGCGCA 1 cut(s) 1350
NsiI ATGCAT 1 cut(s) 1527
NspI RCATGY 1 cut(s) 1377
NspV TTCGAA 1 cut(s) 1502
PaeI GCATGC 1 cut(s) 1377
PaeR7I CTCGAG 1 cut(s) 2123
PagI TCATGA 2 cut(s) 2212, 2232
PciSI GCTCTTC 2 cut(s) 1110, 1572
PcsI WCGNNNNNNNCGW 1 cut(s) 1499
PctI GAATGC 1 cut(s) 1197
PdmI GAANNNNTTC 2 cut(s) 1302, 1656
PfeI GAWTC 4 cut(s) 38, 659, 1008, 1936
PflFI GACNNNGTC 1 cut(s) 830
PkrI GCNGC 4 cut(s) 34, 490, 644, 1453
PleI GAGTC 4 cut(s) 756, 839, 2016, 2074
PpsI GAGTC 4 cut(s) 756, 839, 2016, 2074
PshAI GACNNNNGTC 2 cut(s) 123, 384
Psp1406I AACGTT 1 cut(s) 801
Psp6I CCWGG 1 cut(s) 1676
PspGI CCWGG 1 cut(s) 1676
PspN4I GGNNCC 2 cut(s) 220, 1225
PspPI GGNCC 2 cut(s) 218, 457
PsrI GAACNNNNNNTAC 2 cut(s) 1020, 1052
PsuI RGATCY 4 cut(s) 864, 880, 976, 2029
PsyI GACNNNGTC 1 cut(s) 830
RruI TCGCGA 1 cut(s) 1563
RsaI GTAC 5 cut(s) 46, 366, 925, 1038, 1536
RsaNI GTAC 5 cut(s) 45, 365, 924, 1037, 1535
RseI CAYNNNNRTG 2 cut(s) 147, 1520
SapI GCTCTTC 2 cut(s) 1110, 1572
SatI GCNGC 4 cut(s) 33, 489, 643, 1452
Sau3AI GATC 7 cut(s) 270, 474, 864, 880, 976, 2029, 2101
Sau96I GGNCC 2 cut(s) 218, 457
SchI GAGTC 4 cut(s) 756, 840, 2017, 2075
ScrFI CCNGG 2 cut(s) 1584, 1678
SduI GDGCHC 4 cut(s) 1277, 1584, 1959, 2025
SfaNI GCATC 4 cut(s) 142, 415, 654, 2130
SfcI CTRYAG 2 cut(s) 190, 699
Sfr274I CTCGAG 1 cut(s) 2123
SfuI TTCGAA 1 cut(s) 1502
SinI GGWCC 2 cut(s) 218, 457
SlaI CTCGAG 1 cut(s) 2123
SmiMI CAYNNNNRTG 2 cut(s) 147, 1520
SmlI CTYRAG 3 cut(s) 1040, 2123, 2161
SmoI CTYRAG 3 cut(s) 1040, 2123, 2161
SphI GCATGC 1 cut(s) 1377
SsiI CCGC 3 cut(s) 222, 643, 1451
SspI AATATT 1 cut(s) 2152
SspMI CTAG 1 cut(s) 980
StyD4I CCNGG 2 cut(s) 1582, 1676
StyI CCWWGG 1 cut(s) 2249
TaaI ACNGT 2 cut(s) 461, 700
TaiI ACGT 5 cut(s) 601, 804, 1316, 1911, 2198
TaqI TCGA 9 cut(s) 79, 174, 477, 648, 1493, 1502, 1872, 2019, 2124
TaqII GACCGA 1 cut(s) 2196
TauI GCSGC 2 cut(s) 645, 1454
TfiI GAWTC 4 cut(s) 38, 659, 1008, 1936
TscAI CASTG 6 cut(s) 703, 1209, 1284, 1612, 1769, 2182
TseFI GTSAC 2 cut(s) 956, 1909
TseI GCWGC 2 cut(s) 32, 488
Tsp45I GTSAC 2 cut(s) 956, 1909
TspDTI ATGAA 8 cut(s) 1074, 1112, 1311, 1434, 1880, 2097, 2229, 2249
TspGWI ACGGA 3 cut(s) 560, 843, 1463
TspRI CASTG 6 cut(s) 703, 1209, 1284, 1612, 1769, 2182
Tth111I GACNNNGTC 1 cut(s) 830
Vha464I CTTAAG 1 cut(s) 2161
VpaK11BI GGWCC 2 cut(s) 218, 457
XagI CCTNNNNNAGG 2 cut(s) 743, 1681
XapI RAATTY 6 cut(s) 1119, 1302, 1862, 2047, 2058, 2156
XceI RCATGY 1 cut(s) 1377
XcmI CCANNNNNNNNNTGG 1 cut(s) 1436
XhoI CTCGAG 1 cut(s) 2123
XmiI GTMKAC 1 cut(s) 1419
XmnI GAANNNNTTC 2 cut(s) 1302, 1656
XspI CTAG 1 cut(s) 980
ZraI GACGTC 2 cut(s) 1909, 2196
Zsp2I ATGCAT 1 cut(s) 1527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.