RESISTANCE protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 575, 2220 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2533 |
| AccB1I | GGYRCC | 1 cut(s) | 779 |
| AccII | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| AciI | CCGC | 2 cut(s) | 2451, 2453 |
| AclWI | GGATC | 3 cut(s) | 451, 2134, 2504 |
| AcuI | CTGAAG | 4 cut(s) | 647, 1620, 1714, 2535 |
| AfaI | GTAC | 6 cut(s) | 475, 483, 1167, 1316, 1373, 2167 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 440, 1333, 1366, 1891, 2031 |
| AflII | CTTAAG | 1 cut(s) | 14 |
| AflIII | ACRYGT | 1 cut(s) | 1215 |
| AjiI | CACGTC | 1 cut(s) | 502 |
| AjnI | CCWGG | 2 cut(s) | 1120, 2024 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 516, 548, 2536, 2568 |
| Alw21I | GWGCWC | 1 cut(s) | 1755 |
| Alw26I | GTCTC | 7 cut(s) | 702, 868, 1029, 1037, 1413, 2056, 2519 |
| AlwI | GGATC | 3 cut(s) | 451, 2134, 2504 |
| Ama87I | CYCGRG | 1 cut(s) | 582 |
| AoxI | GGCC | 6 cut(s) | 87, 160, 1084, 1324, 1958, 2433 |
| ApeKI | GCWGC | 7 cut(s) | 41, 795, 1072, 1145, 1340, 1512, 1785 |
| AseI | ATTAAT | 1 cut(s) | 1290 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 858, 915, 1675, 1854 |
| AspLEI | GCGC | 2 cut(s) | 659, 2371 |
| AspS9I | GGNCC | 5 cut(s) | 160, 1084, 1387, 1908, 1958 |
| AsuC2I | CCSGG | 1 cut(s) | 1509 |
| AsuHPI | GGTGA | 6 cut(s) | 284, 745, 1242, 2279, 2440, 2452 |
| AsuII | TTCGAA | 2 cut(s) | 1501, 1669 |
| AvaI | CYCGRG | 1 cut(s) | 582 |
| AvaII | GGWCC | 2 cut(s) | 1387, 1908 |
| BanI | GGYRCC | 1 cut(s) | 779 |
| BanII | GRGCYC | 1 cut(s) | 1755 |
| BauI | CACGAG | 1 cut(s) | 2242 |
| BbsI | GAAGAC | 3 cut(s) | 816, 1394, 1805 |
| Bbv12I | GWGCWC | 1 cut(s) | 1755 |
| BbvI | GCAGC | 7 cut(s) | 28, 782, 1059, 1132, 1352, 1524, 1772 |
| BccI | CCATC | 9 cut(s) | 356, 442, 647, 881, 1474, 1701, 2121, 2304, 2537 |
| BceAI | ACGGC | 1 cut(s) | 1344 |
| BciT130I | CCWGG | 2 cut(s) | 1122, 2026 |
| BciVI | GTATCC | 1 cut(s) | 1439 |
| BcnI | CCSGG | 1 cut(s) | 1509 |
| BcoDI | GTCTC | 7 cut(s) | 702, 868, 1029, 1037, 1413, 2056, 2519 |
| BfaI | CTAG | 6 cut(s) | 50, 164, 530, 849, 1299, 1736 |
| BfmI | CTRYAG | 1 cut(s) | 438 |
| BfoI | RGCGCY | 1 cut(s) | 660 |
| BfrI | CTTAAG | 1 cut(s) | 14 |
| BfuI | GTATCC | 1 cut(s) | 1439 |
| BglII | AGATCT | 1 cut(s) | 1609 |
| BisI | GCNGC | 7 cut(s) | 42, 796, 1073, 1146, 1341, 1513, 1786 |
| BlsI | GCNGC | 7 cut(s) | 43, 797, 1074, 1147, 1342, 1514, 1787 |
| Bme1390I | CCNGG | 3 cut(s) | 1122, 1509, 2026 |
| Bme18I | GGWCC | 2 cut(s) | 1387, 1908 |
| BmeT110I | CYCGRG | 1 cut(s) | 582 |
| BmgBI | CACGTC | 1 cut(s) | 502 |
| BmgT120I | GGNCC | 5 cut(s) | 160, 1084, 1387, 1908, 1958 |
| BmiI | GGNNCC | 2 cut(s) | 467, 781 |
| BmrFI | CCNGG | 3 cut(s) | 1122, 1509, 2026 |
| BmrI | ACTGGG | 3 cut(s) | 823, 1751, 1965 |
| BmsI | GCATC | 7 cut(s) | 16, 1050, 1285, 1371, 1600, 2220, 2228 |
| BmuI | ACTGGG | 3 cut(s) | 823, 1751, 1965 |
| BpiI | GAAGAC | 3 cut(s) | 816, 1394, 1805 |
| BpmI | CTGGAG | 1 cut(s) | 1190 |
| Bpu14I | TTCGAA | 2 cut(s) | 1501, 1669 |
| BpuEI | CTTGAG | 3 cut(s) | 130, 566, 1380 |
| BpuMI | CCSGG | 1 cut(s) | 1509 |
| BsaAI | YACGTR | 2 cut(s) | 1165, 1218 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1158, 2138 |
| BsaI | GGTCTC | 2 cut(s) | 1413, 2519 |
| BsaJI | CCNNGG | 2 cut(s) | 1327, 2451 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1737, 1767 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 440, 1333, 1366, 1891, 2031 |
| Bse1I | ACTGG | 5 cut(s) | 818, 1173, 1442, 1757, 1960 |
| Bse3DI | GCAATG | 2 cut(s) | 924, 2215 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1158, 2138 |
| BseBI | CCWGG | 2 cut(s) | 1122, 2026 |
| BseDI | CCNNGG | 2 cut(s) | 1327, 2451 |
| BseGI | GGATG | 7 cut(s) | 31, 229, 412, 823, 1900, 2243, 2299 |
| BseJI | GATNNNNATC | 2 cut(s) | 1158, 2138 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 440, 1333, 1366, 1891, 2031 |
| BseMI | GCAATG | 2 cut(s) | 924, 2215 |
| BseMII | CTCAG | 4 cut(s) | 1438, 1985, 2215, 2421 |
| BseNI | ACTGG | 5 cut(s) | 818, 1173, 1442, 1757, 1960 |
| BseRI | GAGGAG | 1 cut(s) | 2455 |
| BseXI | GCAGC | 7 cut(s) | 28, 782, 1059, 1132, 1352, 1524, 1772 |
| BsgI | GTGCAG | 2 cut(s) | 1359, 2103 |
| Bsh1236I | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| BshFI | GGCC | 6 cut(s) | 89, 162, 1086, 1326, 1960, 2435 |
| BshNI | GGYRCC | 1 cut(s) | 779 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1755 |
| BsiHKCI | CYCGRG | 1 cut(s) | 582 |
| BsiSI | CCGG | 2 cut(s) | 1087, 1509 |
| BslFI | GGGAC | 1 cut(s) | 94 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 440, 1333, 1366, 1891, 2031 |
| BsmAI | GTCTC | 7 cut(s) | 702, 868, 1029, 1037, 1413, 2056, 2519 |
| BsmBI | CGTCTC | 2 cut(s) | 1037, 2056 |
| BsmFI | GGGAC | 1 cut(s) | 94 |
| BsmI | GAATGC | 3 cut(s) | 753, 917, 1509 |
| BsnI | GGCC | 6 cut(s) | 89, 162, 1086, 1326, 1960, 2435 |
| Bso31I | GGTCTC | 2 cut(s) | 1413, 2519 |
| BsoBI | CYCGRG | 1 cut(s) | 582 |
| Bsp119I | TTCGAA | 2 cut(s) | 1501, 1669 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1755 |
| Bsp1407I | TGTACA | 1 cut(s) | 2165 |
| Bsp143I | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| Bsp68I | TCGCGA | 1 cut(s) | 1101 |
| BspACI | CCGC | 2 cut(s) | 2451, 2453 |
| BspANI | GGCC | 6 cut(s) | 89, 162, 1086, 1326, 1960, 2435 |
| BspCNI | CTCAG | 4 cut(s) | 1437, 1984, 2214, 2422 |
| BspFNI | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| BspLI | GGNNCC | 2 cut(s) | 467, 781 |
| BspPI | GGATC | 3 cut(s) | 451, 2134, 2504 |
| BspQI | GCTCTTC | 1 cut(s) | 666 |
| BspT104I | TTCGAA | 2 cut(s) | 1501, 1669 |
| BspT107I | GGYRCC | 1 cut(s) | 779 |
| BspTI | CTTAAG | 1 cut(s) | 14 |
| BspTNI | GGTCTC | 2 cut(s) | 1413, 2519 |
| BsrDI | GCAATG | 2 cut(s) | 924, 2215 |
| BsrGI | TGTACA | 1 cut(s) | 2165 |
| BsrI | ACTGG | 5 cut(s) | 818, 1173, 1442, 1757, 1960 |
| BssECI | CCNNGG | 2 cut(s) | 1327, 2451 |
| BssMI | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| BssSI | CACGAG | 1 cut(s) | 2242 |
| BssT1I | CCWWGG | 1 cut(s) | 1327 |
| Bst2BI | CACGAG | 1 cut(s) | 2242 |
| Bst2UI | CCWGG | 2 cut(s) | 1122, 2026 |
| Bst4CI | ACNGT | 8 cut(s) | 709, 1195, 1233, 1804, 1932, 2050, 2077, 2325 |
| Bst6I | CTCTTC | 4 cut(s) | 307, 666, 1416, 1467 |
| BstAFI | CTTAAG | 1 cut(s) | 14 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1069, 1642 |
| BstAUI | TGTACA | 1 cut(s) | 2165 |
| BstBAI | YACGTR | 2 cut(s) | 1165, 1218 |
| BstBI | TTCGAA | 2 cut(s) | 1501, 1669 |
| BstC8I | GCNNGC | 4 cut(s) | 681, 931, 1589, 2373 |
| BstDEI | CTNAG | 9 cut(s) | 878, 1054, 1304, 1424, 1577, 1703, 1971, 2201, 2430 |
| BstDSI | CCRYGG | 1 cut(s) | 2451 |
| BstF5I | GGATG | 7 cut(s) | 31, 229, 412, 823, 1900, 2243, 2299 |
| BstFNI | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| BstH2I | RGCGCY | 1 cut(s) | 660 |
| BstHHI | GCGC | 2 cut(s) | 659, 2371 |
| BstKTI | GATC | 7 cut(s) | 446, 544, 1250, 1612, 1693, 2129, 2499 |
| BstMAI | GTCTC | 7 cut(s) | 702, 868, 1029, 1037, 1413, 2056, 2519 |
| BstMBI | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 50, 1069, 1107, 1504, 1642, 1708, 1759 |
| BstNI | CCWGG | 2 cut(s) | 1122, 2026 |
| BstNSI | RCATGY | 2 cut(s) | 683, 933 |
| BstSCI | CCNGG | 3 cut(s) | 1120, 1507, 2024 |
| BstSFI | CTRYAG | 1 cut(s) | 438 |
| BstUI | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| BstV1I | GCAGC | 7 cut(s) | 28, 782, 1059, 1132, 1352, 1524, 1772 |
| BstV2I | GAAGAC | 3 cut(s) | 816, 1394, 1805 |
| BstX2I | RGATCY | 2 cut(s) | 1609, 2126 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 1553, 1918, 2120 |
| BstYI | RGATCY | 2 cut(s) | 1609, 2126 |
| BsuI | GTATCC | 1 cut(s) | 1439 |
| BsuRI | GGCC | 6 cut(s) | 89, 162, 1086, 1326, 1960, 2435 |
| BtgI | CCRYGG | 1 cut(s) | 2451 |
| BtrI | CACGTC | 1 cut(s) | 502 |
| BtsCI | GGATG | 7 cut(s) | 31, 229, 412, 823, 1900, 2243, 2299 |
| BtsIMutI | CAGTG | 3 cut(s) | 1764, 2073, 2427 |
| BtuMI | TCGCGA | 1 cut(s) | 1101 |
| Cac8I | GCNNGC | 4 cut(s) | 681, 931, 1589, 2373 |
| CfoI | GCGC | 2 cut(s) | 659, 2371 |
| Cfr13I | GGNCC | 5 cut(s) | 160, 1084, 1387, 1908, 1958 |
| Cfr42I | CCGCGG | 1 cut(s) | 2454 |
| CseI | GACGC | 1 cut(s) | 323 |
| CsiI | ACCWGGT | 1 cut(s) | 2024 |
| Csp6I | GTAC | 6 cut(s) | 474, 482, 1166, 1315, 1372, 2166 |
| CviAII | CATG | 6 cut(s) | 250, 680, 930, 1064, 1076, 1999 |
| CviQI | GTAC | 6 cut(s) | 474, 482, 1166, 1315, 1372, 2166 |
| DdeI | CTNAG | 9 cut(s) | 878, 1054, 1304, 1424, 1577, 1703, 1971, 2201, 2430 |
| DpnI | GATC | 7 cut(s) | 445, 543, 1249, 1611, 1692, 2128, 2498 |
| DpnII | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| DraI | TTTAAA | 3 cut(s) | 156, 2254, 2397 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2533 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2533 |
| Eam1104I | CTCTTC | 4 cut(s) | 307, 666, 1416, 1467 |
| EarI | CTCTTC | 4 cut(s) | 307, 666, 1416, 1467 |
| Ecl136II | GAGCTC | 1 cut(s) | 1753 |
| Eco130I | CCWWGG | 1 cut(s) | 1327 |
| Eco147I | AGGCCT | 1 cut(s) | 2435 |
| Eco24I | GRGCYC | 1 cut(s) | 1755 |
| Eco31I | GGTCTC | 2 cut(s) | 1413, 2519 |
| Eco47I | GGWCC | 2 cut(s) | 1387, 1908 |
| Eco53kI | GAGCTC | 1 cut(s) | 1753 |
| Eco57I | CTGAAG | 4 cut(s) | 647, 1620, 1714, 2535 |
| Eco88I | CYCGRG | 1 cut(s) | 582 |
| EcoICRI | GAGCTC | 1 cut(s) | 1753 |
| EcoO109I | RGGNCCY | 1 cut(s) | 160 |
| EcoRI | GAATTC | 2 cut(s) | 1671, 1739 |
| EcoRII | CCWGG | 2 cut(s) | 1120, 2024 |
| EcoT14I | CCWWGG | 1 cut(s) | 1327 |
| EcoT22I | ATGCAT | 2 cut(s) | 1065, 1205 |
| EcoT38I | GRGCYC | 1 cut(s) | 1755 |
| ErhI | CCWWGG | 1 cut(s) | 1327 |
| Esp3I | CGTCTC | 2 cut(s) | 1037, 2056 |
| FaeI | CATG | 6 cut(s) | 253, 683, 933, 1067, 1079, 2002 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 899, 931 |
| FaqI | GGGAC | 1 cut(s) | 94 |
| FatI | CATG | 6 cut(s) | 249, 679, 929, 1063, 1075, 1998 |
| Fnu4HI | GCNGC | 7 cut(s) | 42, 796, 1073, 1146, 1341, 1513, 1786 |
| FokI | GGATG | 7 cut(s) | 38, 236, 419, 830, 1907, 2250, 2286 |
| FriOI | GRGCYC | 1 cut(s) | 1755 |
| Fsp4HI | GCNGC | 7 cut(s) | 42, 796, 1073, 1146, 1341, 1513, 1786 |
| FspBI | CTAG | 6 cut(s) | 50, 164, 530, 849, 1299, 1736 |
| GlaI | GCGC | 2 cut(s) | 658, 2370 |
| GluI | GCNGC | 7 cut(s) | 42, 796, 1073, 1146, 1341, 1513, 1786 |
| GsuI | CTGGAG | 1 cut(s) | 1190 |
| HaeII | RGCGCY | 1 cut(s) | 660 |
| HaeIII | GGCC | 6 cut(s) | 89, 162, 1086, 1326, 1960, 2435 |
| HapII | CCGG | 2 cut(s) | 1087, 1509 |
| HgaI | GACGC | 1 cut(s) | 323 |
| HhaI | GCGC | 2 cut(s) | 659, 2371 |
| Hin1II | CATG | 6 cut(s) | 253, 683, 933, 1067, 1079, 2002 |
| Hin6I | GCGC | 2 cut(s) | 657, 2369 |
| HinP1I | GCGC | 2 cut(s) | 657, 2369 |
| HindIII | AAGCTT | 3 cut(s) | 1700, 1833, 2144 |
| HpaII | CCGG | 2 cut(s) | 1087, 1509 |
| HphI | GGTGA | 6 cut(s) | 284, 745, 1242, 2279, 2440, 2452 |
| Hpy166II | GTNNAC | 1 cut(s) | 2448 |
| Hpy8I | GTNNAC | 1 cut(s) | 2448 |
| Hpy99I | CGWCG | 3 cut(s) | 474, 503, 795 |
| HpyAV | CCTTC | 7 cut(s) | 347, 901, 991, 1264, 1686, 2301, 2513 |
| HpyCH4III | ACNGT | 8 cut(s) | 709, 1195, 1233, 1804, 1932, 2050, 2077, 2325 |
| HpyCH4IV | ACGT | 4 cut(s) | 501, 1129, 1164, 1217 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 50, 1069, 1107, 1504, 1642, 1708, 1759 |
| HpyF3I | CTNAG | 9 cut(s) | 878, 1054, 1304, 1424, 1577, 1703, 1971, 2201, 2430 |
| HpySE526I | ACGT | 4 cut(s) | 501, 1129, 1164, 1217 |
| Hsp92II | CATG | 6 cut(s) | 253, 683, 933, 1067, 1079, 2002 |
| HspAI | GCGC | 2 cut(s) | 657, 2369 |
| KspI | CCGCGG | 1 cut(s) | 2454 |
| Kzo9I | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| LguI | GCTCTTC | 1 cut(s) | 666 |
| LmnI | GCTCC | 5 cut(s) | 471, 591, 1758, 2387, 2408 |
| Lsp1109I | GCAGC | 7 cut(s) | 28, 782, 1059, 1132, 1352, 1524, 1772 |
| LweI | GCATC | 7 cut(s) | 16, 1050, 1285, 1371, 1600, 2220, 2228 |
| MabI | ACCWGGT | 1 cut(s) | 2024 |
| MaeI | CTAG | 6 cut(s) | 50, 164, 530, 849, 1299, 1736 |
| MaeII | ACGT | 4 cut(s) | 501, 1129, 1164, 1217 |
| MaeIII | GTNAC | 5 cut(s) | 201, 1361, 2345, 2425, 2458 |
| MalI | GATC | 7 cut(s) | 445, 543, 1249, 1611, 1692, 2128, 2498 |
| MboI | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| MfeI | CAATTG | 1 cut(s) | 1092 |
| MflI | RGATCY | 2 cut(s) | 1609, 2126 |
| MhlI | GDGCHC | 1 cut(s) | 1755 |
| MlyI | GAGTC | 1 cut(s) | 291 |
| MmeI | TCCRAC | 6 cut(s) | 514, 538, 1215, 1872, 2012, 2534 |
| Mph1103I | ATGCAT | 2 cut(s) | 1065, 1205 |
| MroXI | GAANNNNTTC | 4 cut(s) | 858, 915, 1675, 1854 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2003, 2118, 2354 |
| MspA1I | CMGCKG | 1 cut(s) | 2453 |
| MspCI | CTTAAG | 1 cut(s) | 14 |
| MspI | CCGG | 2 cut(s) | 1087, 1509 |
| MspR9I | CCNGG | 3 cut(s) | 1122, 1509, 2026 |
| MunI | CAATTG | 1 cut(s) | 1092 |
| Mva1269I | GAATGC | 3 cut(s) | 753, 917, 1509 |
| MvaI | CCWGG | 2 cut(s) | 1122, 2026 |
| MvnI | CGCG | 3 cut(s) | 1101, 1313, 2453 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 50, 1069, 1107, 1504, 1642, 1708, 1759 |
| NciI | CCSGG | 1 cut(s) | 1509 |
| NdeII | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| NlaIII | CATG | 6 cut(s) | 253, 683, 933, 1067, 1079, 2002 |
| NlaIV | GGNNCC | 2 cut(s) | 467, 781 |
| NmuCI | GTSAC | 3 cut(s) | 1361, 2425, 2458 |
| NruI | TCGCGA | 1 cut(s) | 1101 |
| NsiI | ATGCAT | 2 cut(s) | 1065, 1205 |
| NspI | RCATGY | 2 cut(s) | 683, 933 |
| NspV | TTCGAA | 2 cut(s) | 1501, 1669 |
| PaeI | GCATGC | 2 cut(s) | 683, 933 |
| PaeR7I | CTCGAG | 1 cut(s) | 582 |
| PceI | AGGCCT | 1 cut(s) | 2435 |
| PciSI | GCTCTTC | 1 cut(s) | 666 |
| PctI | GAATGC | 3 cut(s) | 753, 917, 1509 |
| PdmI | GAANNNNTTC | 4 cut(s) | 858, 915, 1675, 1854 |
| PkrI | GCNGC | 7 cut(s) | 43, 797, 1074, 1147, 1342, 1514, 1787 |
| PleI | GAGTC | 1 cut(s) | 291 |
| PpsI | GAGTC | 1 cut(s) | 291 |
| Ppu21I | YACGTR | 2 cut(s) | 1165, 1218 |
| PshBI | ATTAAT | 1 cut(s) | 1290 |
| PsiI | TTATAA | 2 cut(s) | 575, 2220 |
| Psp124BI | GAGCTC | 1 cut(s) | 1755 |
| Psp6I | CCWGG | 2 cut(s) | 1120, 2024 |
| PspGI | CCWGG | 2 cut(s) | 1120, 2024 |
| PspN4I | GGNNCC | 2 cut(s) | 467, 781 |
| PspPI | GGNCC | 5 cut(s) | 160, 1084, 1387, 1908, 1958 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 474, 506 |
| PsuI | RGATCY | 2 cut(s) | 1609, 2126 |
| RruI | TCGCGA | 1 cut(s) | 1101 |
| RsaI | GTAC | 6 cut(s) | 475, 483, 1167, 1316, 1373, 2167 |
| RsaNI | GTAC | 6 cut(s) | 474, 482, 1166, 1315, 1372, 2166 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2003, 2118, 2354 |
| SacI | GAGCTC | 1 cut(s) | 1755 |
| SacII | CCGCGG | 1 cut(s) | 2454 |
| SapI | GCTCTTC | 1 cut(s) | 666 |
| SatI | GCNGC | 7 cut(s) | 42, 796, 1073, 1146, 1341, 1513, 1786 |
| Sau3AI | GATC | 7 cut(s) | 443, 541, 1247, 1609, 1690, 2126, 2496 |
| Sau96I | GGNCC | 5 cut(s) | 160, 1084, 1387, 1908, 1958 |
| SchI | GAGTC | 1 cut(s) | 291 |
| ScrFI | CCNGG | 3 cut(s) | 1122, 1509, 2026 |
| SduI | GDGCHC | 1 cut(s) | 1755 |
| SexAI | ACCWGGT | 1 cut(s) | 2024 |
| SfaNI | GCATC | 7 cut(s) | 16, 1050, 1285, 1371, 1600, 2220, 2228 |
| SfcI | CTRYAG | 1 cut(s) | 438 |
| Sfr274I | CTCGAG | 1 cut(s) | 582 |
| Sfr303I | CCGCGG | 1 cut(s) | 2454 |
| SfuI | TTCGAA | 2 cut(s) | 1501, 1669 |
| SgrBI | CCGCGG | 1 cut(s) | 2454 |
| SinI | GGWCC | 2 cut(s) | 1387, 1908 |
| SlaI | CTCGAG | 1 cut(s) | 582 |
| SmiI | ATTTAAAT | 1 cut(s) | 2397 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2003, 2118, 2354 |
| SmlI | CTYRAG | 5 cut(s) | 14, 145, 545, 582, 1395 |
| SmoI | CTYRAG | 5 cut(s) | 14, 145, 545, 582, 1395 |
| SphI | GCATGC | 2 cut(s) | 683, 933 |
| SseBI | AGGCCT | 1 cut(s) | 2435 |
| SsiI | CCGC | 2 cut(s) | 2451, 2453 |
| SspI | AATATT | 1 cut(s) | 972 |
| SspMI | CTAG | 6 cut(s) | 50, 164, 530, 849, 1299, 1736 |
| SstI | GAGCTC | 1 cut(s) | 1755 |
| StuI | AGGCCT | 1 cut(s) | 2435 |
| StyD4I | CCNGG | 3 cut(s) | 1120, 1507, 2024 |
| StyI | CCWWGG | 1 cut(s) | 1327 |
| SwaI | ATTTAAAT | 1 cut(s) | 2397 |
| TaaI | ACNGT | 8 cut(s) | 709, 1195, 1233, 1804, 1932, 2050, 2077, 2325 |
| TaiI | ACGT | 4 cut(s) | 504, 1132, 1167, 1220 |
| TaqI | TCGA | 9 cut(s) | 583, 1246, 1501, 1669, 1858, 2132, 2152, 2228, 2523 |
| TaqII | GACCGA | 1 cut(s) | 1395 |
| TatI | WGTACW | 1 cut(s) | 2165 |
| TscAI | CASTG | 3 cut(s) | 1764, 2080, 2434 |
| TseFI | GTSAC | 3 cut(s) | 1361, 2425, 2458 |
| TseI | GCWGC | 7 cut(s) | 41, 795, 1072, 1145, 1340, 1512, 1785 |
| Tsp45I | GTSAC | 3 cut(s) | 1361, 2425, 2458 |
| TspGWI | ACGGA | 3 cut(s) | 383, 458, 779 |
| TspRI | CASTG | 3 cut(s) | 1764, 2080, 2434 |
| Vha464I | CTTAAG | 1 cut(s) | 14 |
| VpaK11BI | GGWCC | 2 cut(s) | 1387, 1908 |
| VspI | ATTAAT | 1 cut(s) | 1290 |
| XbaI | TCTAGA | 1 cut(s) | 1735 |
| XceI | RCATGY | 2 cut(s) | 683, 933 |
| XhoI | CTCGAG | 1 cut(s) | 582 |
| XmnI | GAANNNNTTC | 4 cut(s) | 858, 915, 1675, 1854 |
| XspI | CTAG | 6 cut(s) | 50, 164, 530, 849, 1299, 1736 |
| Zsp2I | ATGCAT | 2 cut(s) | 1065, 1205 |