Rmu_sc0003690.1_g000001
NBS-LRR Family

Disease resistance protein (TIR-NBS-LRR class)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003690.1
Physical Location & Seq
Reverse (-)
1195 .. 6055
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003690.1_g000001.1.cds

Sequence Viewer

Length: 4326 bp
atggcttcctattctgtttcttcttctctcttcccccaaaaagaaaagtatgatgtttttctcagtttcagaggcgaggatactcgccaaacttttactagccatcttcatgctgctttgataaggaggaaagtggaaacctacatagattacagacttgagagaggagatgaagttggacccgcccttctaaaagcaatcaaggaatcaaagatttccgtgatcattttctcaaaagactatgcttcttccacatggtgcttggatgaacttgcctatatactggaatgcaaggaaaaacatggacaatatgttatacctgttttttacgagatagatccatcacatgtacgctaccagatgggaagttatgagactgcatttgctacacatgaacaaaggttgaagaacaagacggacaaggtgcccaaatggaaggaatctttagtaaaagcagccaacctatctgggtttgattcaacttcaaaaactgttgggcatgattacgatttagttgagcaagtcgtcaaagatgtgttggctaaattgaattgtgaatcagcaagtgatttaactggtttgattggagttgaaaggcgcattaagaaaattttattggaattagacatcatcccagaagatgttcgtgttcgctctgtggttgtctggggtatgggtggtattggcaagaccacgcttgctgatgctgtatttcagggactcacttctcaattcgaagctcactgttttcttgcaaatgttagggaacgatcaggtaccaaaggagctttctcttctgaactgtatcatttgcgaaatgaacttcttggagaattactaggggacaggagtttagctatctgtactcaaactataggtgctgtttacaaagaaaggctccgccgtacaaaagtccttgttgttcttgacgacgtgaatgattcaagccagttaatatttttagctgtagaagtcccatttggcccaggaagtagaataattataacaactcgagatatgctaccagttagggaaactctagtgatgaaggaattagctgaccattatgttaagatctacgcggtggaggaattaaatggtgttgaatctcttcagctcttccattcaaatgctcccacacaatgtacagcaaattcagaacttttaaagaaggtggtagatcatgctgcaggcattccattagcccttaaaattttgcattctttatttcttcgatgcaagaggatagaagaaatggaattgttgtggtctaaatttaaaaagtttcccaacaaaaaacttcagaatgtgtacagagcaagttatgatggattagaaagaaatgagagggagatattccttgatattgcatgttttcacagaagggagaaactttgtgatgtaaaaagagtgttagctgcctgtggtttatatccggatgatggaatcaaaattctcattgatatgtctctcatatcaattaaagacaaccgcatatggatgcatgatgtgatccaggaaatgggttgggagattgtccgcgaagaaagtattgaaaagccgggaaagcgcagtaggttgcacaatggtgaggatgtctgtcatgtattaagaaggaatacgggaactgcaaaagttcaaagcatttccagcctgaattgtgttaagaggctaacgttagatcctcaagctttcacaggaatgcataacttgagactccttacgcttatatttatacagcttgaccacaagacaaatcttgagtatcttcctgatgcccttcgatatatattttggcatagttaccctttcgaatctttgccatcaaagttttctccaaaaaatcttgttgagcttcatatgccctggagcaaactcaagagactttggaagaaaggccagaatcctgagaacttgaaaaggatcaatcttagttactccatggacctggttgaagttgcagatctgtcaaattgtgtaaacattgaaagtatagattttcaatgctgtaaaagtttggttaaagtttcagatttgtcaaagagtcgttacattgagagtataaatcttcaaggctgtataagtttggttaaagttccagacctgtcaaagagtgtaaatattcagagcataaatcttcaaggctgtgaaagtttagttcaagttcctccgtattttcaaaattttaccaagcttactcatctgaatttgggggattgctcgaaaatcagtattctaccaaagataccaagcaagatggaatttttagatttaagtagaactgctatagaagaattgcctccatcaatttggtctcttgaacagcttgttaaattgaatcttcactgctgtaggttcattaagaatttttcgagcagttcatggaagatgatgaaatccctcaacagtcttattttgagcaacacaaaaatagaaacagtgccctcatcattactcatgtgtatgacttggatcatttcacttgacctgagtttctgtgattgccttgtcagtctcccaaccaacatttgtgagttaaaatctcttgagaaacttgatctctctggttgctatagtttcacaaactttccggaaattgcggagcctatggaacatctgcagtatctgaatttgagcgggacaaaaattaagaagctaccctcatcggttgggaatcttgttgggattaagaaattagatttatctcactgcacaagccttgaattactcccaaacagcttctacaatttaaacctactggagtggctttcacttggtgactgtgtcaagctaaaaaaattgcctctctcgttcattttgtgctctttgataaatctaaacctcggaggctgcaaattgttagaagaaattcctgattgcttcaccagctttcccgcattgcaagtcttagatcttagtggaaccatgattgagaccatacctcccaccatcaaacaagtttttggtctcaagtctctgagacttaaaaggtgcaagcggcttcaatctttgccagtgcttccatctcttctagaaaagttggatgtagctaagtgcttgagacttaagacggtgtcagtttcagtgacggcacagacacaaggtttggatgaaatacgttgtgggaagaggacagagatccttacattttctgcttgcgttaatttggataaaaattcaaggagtaacataatggatgatgcacacgtcagaattatgcggatggcaactgcttgtaatcttaaacgtttacaatctggtaaagttgcattaatatgtccgggaaatgaaattccagaatggtttagctgtcaaacggagggatcttcaatgaatattaagcttcccctgcattggtctggtgattcaaacttcttgggtattgctctctgctctgttttttcagtccataatcattatcattatcttgatcatcaatgtgagatgattctcaaaaccaacaatggtgaaacccgtagtgtcaatttgggaagtacagagtgcttcgggactatgcgcctgacgggtaaagcagatcacgtgtttgtgtggtataataaagcccatgcagtttcagatgaaggaaaatggtcgatggaagcctctttcgacttctatacagaagtcgatggtaaacggcagaataacgtgaaaaggtgtggggtctgctttctgtatggtcaaggccaagatgatgatgctctgaaatttgaagtcattcgtccacaacaagttactgcagctaggagaagacatttcagaagcctcccaagtaacagtcaccagtctcacatattggatgagaatgtttggaagactatttggagtttgaaagtccttccaaaaatcaagtctttcttttggagagtactttgtaatgcattgcctacctatctcaacttgttcagaaaaaatctggtaagaaatcccatgtgccccatctgccatgactacgaagaatcaatagaacatgtgttgttattatgcccttgggtggagacagtctggtttggctcccctttaggttataaaattaacaaatgcagaatcactactattcataagtggatcttggatttacaaggtacatctactactgacattgagaaaaatttggttcttaccatggggggattcctttgttggtcaatttggcagagtagatgcagctttgtgtatcagggtaaatcactctctccggttgattcaatcactagggcactccgtttgatgaatgagtttttggcagcccaatctttcggtgccaaccacttacttcttcaccatcttgacctaatgtctggtctcctccactatagccactaa

Protein Analysis

1441

Amino Acids

163.92

Weight (kDa)

8.56

Isoelectric Point (pI)

47.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1004, 4029
Acc65I GGTACC 1 cut(s) 776
AccB1I GGYRCC 3 cut(s) 424, 776, 4262
AccB7I CCANNNNNTGG 1 cut(s) 1522
AccBSI CCGCTC 1 cut(s) 2637
AccII CGCG 2 cut(s) 1082, 1542
AccIII TCCGGA 2 cut(s) 1435, 2590
AclI AACGTT 2 cut(s) 1676, 3247
AclWI GGATC 8 cut(s) 332, 1507, 1676, 1931, 2480, 3133, 3331, 4076
AcuI CTGAAG 2 cut(s) 1097, 1286
AcvI CACGTG 1 cut(s) 3541
AdeI CACNNNGTG 2 cut(s) 258, 2777
AfaI GTAC 9 cut(s) 351, 778, 865, 907, 1147, 1313, 3496, 3870, 4087
AfiI CCNNNNNNNGG 4 cut(s) 1442, 1522, 3354, 3994
AflII CTTAAG 1 cut(s) 3065
AflIII ACRYGT 4 cut(s) 346, 3205, 3540, 3970
AhdI GACNNNNNGTC 1 cut(s) 4297
AjiI CACGTC 2 cut(s) 934, 3208
AjnI CCWGG 4 cut(s) 985, 1515, 1865, 1947
AjuI GAANNNNNNNTTGG 8 cut(s) 599, 631, 773, 805, 963, 995, 4226, 4258
AleI CACNNNNGTG 1 cut(s) 1587
Alw21I GWGCWC 1 cut(s) 2825
AlwI GGATC 8 cut(s) 332, 1507, 1676, 1931, 2480, 3133, 3331, 4076
AlwNI CAGNNNCTG 1 cut(s) 2626
Ama87I CYCGRG 1 cut(s) 1011
Aor13HI TCCGGA 2 cut(s) 1435, 2590
AoxI GGCC 3 cut(s) 982, 1897, 3685
ApeKI GCWGC 8 cut(s) 113, 455, 1187, 1418, 2850, 3740, 4167, 4247
ArsI GACNNNNNNTTYG 4 cut(s) 3088, 3120, 3836, 3868
AseI ATTAAT 1 cut(s) 3272
Asp700I GAANNNNTTC 4 cut(s) 642, 1110, 2868, 3717
Asp718I GGTACC 1 cut(s) 776
AspLEI GCGC 3 cut(s) 600, 1572, 3519
AspS9I GGNCC 3 cut(s) 179, 983, 1945
AsuC2I CCSGG 2 cut(s) 1563, 3282
AsuHPI GGTGA 7 cut(s) 1601, 2789, 2875, 3374, 3479, 3773, 4274
AsuII TTCGAA 2 cut(s) 735, 1812
AvaI CYCGRG 1 cut(s) 1011
AvaII GGWCC 2 cut(s) 179, 1945
BaeGI GKGCMC 4 cut(s) 429, 2445, 3938, 4222
BanI GGYRCC 3 cut(s) 424, 776, 4262
BbrPI CACGTG 1 cut(s) 3541
BbsI GAAGAC 2 cut(s) 3757, 3821
Bbv12I GWGCWC 1 cut(s) 2825
BbvI GCAGC 8 cut(s) 100, 467, 1174, 1405, 2837, 3752, 4179, 4259
BceAI ACGGC 3 cut(s) 888, 3105, 3653
BciT130I CCWGG 4 cut(s) 987, 1517, 1867, 1949
BciVI GTATCC 1 cut(s) 73
BclI TGATCA 2 cut(s) 222, 3430
BcnI CCSGG 2 cut(s) 1563, 3282
BfaI CTAG 6 cut(s) 99, 839, 1040, 3032, 3744, 4215
BfmI CTRYAG 9 cut(s) 873, 966, 1188, 2286, 2350, 2572, 2618, 3738, 4315
BfrI CTTAAG 1 cut(s) 3065
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 3 cut(s) 1074, 1963, 2911
BisI GCNGC 9 cut(s) 114, 456, 1188, 1419, 2851, 2999, 3741, 4168, 4248
BlsI GCNGC 9 cut(s) 115, 457, 1189, 1420, 2852, 3000, 3742, 4169, 4249
BmcAI AGTACT 1 cut(s) 3870
Bme1390I CCNGG 6 cut(s) 987, 1517, 1563, 1867, 1949, 3282
Bme18I GGWCC 2 cut(s) 179, 1945
BmeRI GACNNNNNGTC 1 cut(s) 4297
BmeT110I CYCGRG 1 cut(s) 1011
BmgBI CACGTC 2 cut(s) 934, 3208
BmgT120I GGNCC 3 cut(s) 179, 983, 1945
BmiI GGNNCC 8 cut(s) 181, 426, 778, 899, 2604, 2923, 4015, 4264
BmrFI CCNGG 6 cut(s) 987, 1517, 1563, 1867, 1949, 3282
BmsI GCATC 7 cut(s) 694, 1226, 1491, 1765, 3190, 3688, 4154
BpiI GAAGAC 2 cut(s) 3757, 3821
BpmI CTGGAG 2 cut(s) 1888, 2780
Bpu14I TTCGAA 2 cut(s) 735, 1812
BpuEI CTTGAG 8 cut(s) 179, 1671, 1732, 1781, 1862, 2567, 2954, 3079
BpuMI CCSGG 2 cut(s) 1563, 3282
BsaAI YACGTR 1 cut(s) 3541
BsaI GGTCTC 4 cut(s) 2319, 2927, 2972, 4310
BsaJI CCNNGG 6 cut(s) 985, 1865, 1941, 2842, 3989, 4125
BsaWI WCCGGW 3 cut(s) 1435, 2590, 4198
BsaXI ACNNNNNCTCC 4 cut(s) 159, 189, 2926, 2956
Bsc4I CCNNNNNNNGG 4 cut(s) 1442, 1522, 3354, 3994
Bse1I ACTGG 7 cut(s) 288, 580, 949, 1025, 2763, 3014, 3784
Bse3DI GCAATG 2 cut(s) 2897, 3881
BseAI TCCGGA 2 cut(s) 1435, 2590
BseBI CCWGG 4 cut(s) 987, 1517, 1867, 1949
BseDI CCNNGG 6 cut(s) 985, 1865, 1941, 2842, 3989, 4125
BseLI CCNNNNNNNGG 4 cut(s) 1442, 1522, 3354, 3994
BseMI GCAATG 2 cut(s) 2897, 3881
BseMII CTCAG 4 cut(s) 76, 1899, 2480, 2969
BseNI ACTGG 7 cut(s) 288, 580, 949, 1025, 2763, 3014, 3784
BseRI GAGGAG 2 cut(s) 180, 4298
BseSI GKGCMC 4 cut(s) 429, 2445, 3938, 4222
BseXI GCAGC 8 cut(s) 100, 467, 1174, 1405, 2837, 3752, 4179, 4259
BsgI GTGCAG 1 cut(s) 2695
Bsh1236I CGCG 2 cut(s) 1082, 1542
BshFI GGCC 3 cut(s) 984, 1899, 3687
BshNI GGYRCC 3 cut(s) 424, 776, 4262
BsiHKAI GWGCWC 1 cut(s) 2825
BsiHKCI CYCGRG 1 cut(s) 1011
BsiSI CCGG 5 cut(s) 1436, 1562, 2591, 3281, 4199
BslFI GGGAC 5 cut(s) 732, 857, 959, 2653, 3523
BslI CCNNNNNNNGG 4 cut(s) 1442, 1522, 3354, 3994
BsmFI GGGAC 5 cut(s) 732, 857, 959, 2653, 3523
BsmI GAATGC 4 cut(s) 293, 1194, 1219, 1707
BsnI GGCC 3 cut(s) 984, 1899, 3687
Bso31I GGTCTC 4 cut(s) 2319, 2927, 2972, 4310
BsoBI CYCGRG 1 cut(s) 1011
Bsp119I TTCGAA 2 cut(s) 735, 1812
Bsp1286I GDGCHC 5 cut(s) 429, 2445, 2825, 3938, 4222
Bsp13I TCCGGA 2 cut(s) 1435, 2590
Bsp1407I TGTACA 2 cut(s) 1145, 1311
Bsp19I CCATGG 2 cut(s) 1941, 4125
BspANI GGCC 3 cut(s) 984, 1899, 3687
BspCNI CTCAG 4 cut(s) 75, 1900, 2481, 2970
BspEI TCCGGA 2 cut(s) 1435, 2590
BspFNI CGCG 2 cut(s) 1082, 1542
BspLI GGNNCC 8 cut(s) 181, 426, 778, 899, 2604, 2923, 4015, 4264
BspMAI CTGCAG 3 cut(s) 1192, 2622, 3742
BspPI GGATC 8 cut(s) 332, 1507, 1676, 1931, 2480, 3133, 3331, 4076
BspQI GCTCTTC 1 cut(s) 1124
BspT104I TTCGAA 2 cut(s) 735, 1812
BspT107I GGYRCC 3 cut(s) 424, 776, 4262
BspTI CTTAAG 1 cut(s) 3065
BspTNI GGTCTC 4 cut(s) 2319, 2927, 2972, 4310
BsrBI CCGCTC 1 cut(s) 2637
BsrDI GCAATG 2 cut(s) 2897, 3881
BsrGI TGTACA 2 cut(s) 1145, 1311
BsrI ACTGG 7 cut(s) 288, 580, 949, 1025, 2763, 3014, 3784
BssECI CCNNGG 6 cut(s) 985, 1865, 1941, 2842, 3989, 4125
BssT1I CCWWGG 3 cut(s) 1941, 3989, 4125
Bst2UI CCWGG 4 cut(s) 987, 1517, 1867, 1949
Bst4CI ACNGT 9 cut(s) 493, 746, 804, 2408, 2440, 2783, 3073, 3779, 4003
Bst6I CTCTTC 6 cut(s) 35, 799, 1116, 1124, 3033, 3122
BstAFI CTTAAG 1 cut(s) 3065
BstAUI TGTACA 2 cut(s) 1145, 1311
BstBAI YACGTR 1 cut(s) 3541
BstBI TTCGAA 2 cut(s) 735, 1812
BstC8I GCNNGC 4 cut(s) 699, 1192, 2996, 3157
BstDEI CTNAG 8 cut(s) 62, 1908, 1931, 2489, 2908, 2915, 2978, 3051
BstDSI CCRYGG 2 cut(s) 1941, 4125
BstFNI CGCG 2 cut(s) 1082, 1542
BstHHI GCGC 3 cut(s) 600, 1572, 3519
BstMWI GCNNNNNNNGC 6 cut(s) 1567, 1650, 1861, 2886, 3349, 3942
BstNI CCWGG 4 cut(s) 987, 1517, 1867, 1949
BstNSI RCATGY 3 cut(s) 350, 1374, 3974
BstSCI CCNGG 6 cut(s) 985, 1515, 1561, 1865, 1947, 3280
BstSFI CTRYAG 9 cut(s) 873, 966, 1188, 2286, 2350, 2572, 2618, 3738, 4315
BstSLI GKGCMC 4 cut(s) 429, 2445, 3938, 4222
BstUI CGCG 2 cut(s) 1082, 1542
BstV1I GCAGC 8 cut(s) 100, 467, 1174, 1405, 2837, 3752, 4179, 4259
BstV2I GAAGAC 2 cut(s) 3757, 3821
BstX2I RGATCY 8 cut(s) 337, 1074, 1681, 1963, 2911, 3138, 3323, 4068
BstXI CCANNNNNNTGG 2 cut(s) 1948, 2310
BstYI RGATCY 8 cut(s) 337, 1074, 1681, 1963, 2911, 3138, 3323, 4068
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 3 cut(s) 984, 1899, 3687
BtgI CCRYGG 2 cut(s) 1941, 4125
BtrI CACGTC 2 cut(s) 934, 3208
BtsI GCAGTG 2 cut(s) 2344, 2707
BtsIMutI CAGTG 6 cut(s) 742, 2344, 2445, 2707, 3021, 3090
Cac8I GCNNGC 4 cut(s) 699, 1192, 2996, 3157
CaiI CAGNNNCTG 1 cut(s) 2626
CfoI GCGC 3 cut(s) 600, 1572, 3519
Cfr13I GGNCC 3 cut(s) 179, 983, 1945
CsiI ACCWGGT 1 cut(s) 1947
Csp6I GTAC 9 cut(s) 350, 777, 864, 906, 1146, 1312, 3495, 3869, 4086
CviQI GTAC 9 cut(s) 350, 777, 864, 906, 1146, 1312, 3495, 3869, 4086
DdeI CTNAG 8 cut(s) 62, 1908, 1931, 2489, 2908, 2915, 2978, 3051
DraI TTTAAA 3 cut(s) 1167, 1279, 2751
DraIII CACNNNGTG 2 cut(s) 258, 2777
DriI GACNNNNNGTC 1 cut(s) 4297
Eam1104I CTCTTC 6 cut(s) 35, 799, 1116, 1124, 3033, 3122
Eam1105I GACNNNNNGTC 1 cut(s) 4297
EarI CTCTTC 6 cut(s) 35, 799, 1116, 1124, 3033, 3122
EciI GGCGGA 1 cut(s) 890
Eco130I CCWWGG 3 cut(s) 1941, 3989, 4125
Eco31I GGTCTC 4 cut(s) 2319, 2927, 2972, 4310
Eco47I GGWCC 2 cut(s) 179, 1945
Eco57I CTGAAG 2 cut(s) 1097, 1286
Eco72I CACGTG 1 cut(s) 3541
Eco88I CYCGRG 1 cut(s) 1011
EcoRII CCWGG 4 cut(s) 985, 1515, 1865, 1947
EcoT14I CCWWGG 3 cut(s) 1941, 3989, 4125
EcoT22I ATGCAT 3 cut(s) 1506, 1707, 3883
ErhI CCWWGG 3 cut(s) 1941, 3989, 4125
FalI AAGNNNNNCTT 4 cut(s) 3842, 3874, 4055, 4087
FaqI GGGAC 5 cut(s) 732, 857, 959, 2653, 3523
FauI CCCGC 3 cut(s) 190, 2630, 2902
FauNDI CATATG 2 cut(s) 1496, 1860
FbaI TGATCA 2 cut(s) 222, 3430
Fnu4HI GCNGC 9 cut(s) 114, 456, 1188, 1419, 2851, 2999, 3741, 4168, 4248
Fsp4HI GCNGC 9 cut(s) 114, 456, 1188, 1419, 2851, 2999, 3741, 4168, 4248
FspBI CTAG 6 cut(s) 99, 839, 1040, 3032, 3744, 4215
GlaI GCGC 3 cut(s) 599, 1571, 3518
GluI GCNGC 9 cut(s) 114, 456, 1188, 1419, 2851, 2999, 3741, 4168, 4248
GsuI CTGGAG 2 cut(s) 1888, 2780
HaeIII GGCC 3 cut(s) 984, 1899, 3687
HapII CCGG 5 cut(s) 1436, 1562, 2591, 3281, 4199
HhaI GCGC 3 cut(s) 600, 1572, 3519
Hin6I GCGC 3 cut(s) 598, 1570, 3517
HinP1I GCGC 3 cut(s) 598, 1570, 3517
HindIII AAGCTT 3 cut(s) 1689, 2192, 3341
HpaII CCGG 5 cut(s) 1436, 1562, 2591, 3281, 4199
HphI GGTGA 7 cut(s) 1601, 2789, 2875, 3374, 3479, 3773, 4274
Hpy166II GTNNAC 6 cut(s) 886, 1312, 1981, 3251, 3635, 3725
Hpy8I GTNNAC 6 cut(s) 886, 1312, 1981, 3251, 3635, 3725
Hpy99I CGWCG 1 cut(s) 935
HpyAV CCTTC 9 cut(s) 197, 430, 1042, 1165, 1377, 1608, 1790, 3575, 3848
HpyCH4III ACNGT 9 cut(s) 493, 746, 804, 2408, 2440, 2783, 3073, 3779, 4003
HpyCH4IV ACGT 7 cut(s) 933, 1676, 3118, 3207, 3247, 3540, 3648
HpyF10VI GCNNNNNNNGC 6 cut(s) 1567, 1650, 1861, 2886, 3349, 3942
HpyF3I CTNAG 8 cut(s) 62, 1908, 1931, 2489, 2908, 2915, 2978, 3051
HpySE526I ACGT 7 cut(s) 933, 1676, 3118, 3207, 3247, 3540, 3648
HspAI GCGC 3 cut(s) 598, 1570, 3517
Kpn2I TCCGGA 2 cut(s) 1435, 2590
KpnI GGTACC 1 cut(s) 780
Ksp22I TGATCA 2 cut(s) 222, 3430
LguI GCTCTTC 1 cut(s) 1124
LmnI GCTCC 6 cut(s) 785, 903, 1138, 1869, 2602, 4019
Lsp1109I GCAGC 8 cut(s) 100, 467, 1174, 1405, 2837, 3752, 4179, 4259
LweI GCATC 7 cut(s) 694, 1226, 1491, 1765, 3190, 3688, 4154
MabI ACCWGGT 1 cut(s) 1947
MaeI CTAG 6 cut(s) 99, 839, 1040, 3032, 3744, 4215
MaeII ACGT 7 cut(s) 933, 1676, 3118, 3207, 3247, 3540, 3648
MaeIII GTNAC 9 cut(s) 1802, 1934, 2048, 2777, 3085, 3185, 3733, 3773, 3779
MbiI CCGCTC 1 cut(s) 2637
MflI RGATCY 8 cut(s) 337, 1074, 1681, 1963, 2911, 3138, 3323, 4068
MhlI GDGCHC 5 cut(s) 429, 2445, 2825, 3938, 4222
MlyI GAGTC 3 cut(s) 714, 1710, 2053
MmeI TCCRAC 2 cut(s) 157, 3021
Mph1103I ATGCAT 3 cut(s) 1506, 1707, 3883
MroI TCCGGA 2 cut(s) 1435, 2590
MroXI GAANNNNTTC 4 cut(s) 642, 1110, 2868, 3717
MslI CAYNNNNRTG 9 cut(s) 108, 1128, 1463, 1499, 1587, 1700, 2462, 3274, 3438
MspCI CTTAAG 1 cut(s) 3065
MspI CCGG 5 cut(s) 1436, 1562, 2591, 3281, 4199
MspR9I CCNGG 6 cut(s) 987, 1517, 1563, 1867, 1949, 3282
Mva1269I GAATGC 4 cut(s) 293, 1194, 1219, 1707
MvaI CCWGG 4 cut(s) 987, 1517, 1867, 1949
MvnI CGCG 2 cut(s) 1082, 1542
MwoI GCNNNNNNNGC 6 cut(s) 1567, 1650, 1861, 2886, 3349, 3942
NciI CCSGG 2 cut(s) 1563, 3282
NcoI CCATGG 2 cut(s) 1941, 4125
NdeI CATATG 2 cut(s) 1496, 1860
NlaIV GGNNCC 8 cut(s) 181, 426, 778, 899, 2604, 2923, 4015, 4264
NmuCI GTSAC 3 cut(s) 2777, 3085, 3779
NsiI ATGCAT 3 cut(s) 1506, 1707, 3883
NspI RCATGY 3 cut(s) 350, 1374, 3974
NspV TTCGAA 2 cut(s) 735, 1812
OliI CACNNNNGTG 1 cut(s) 1587
PaeR7I CTCGAG 1 cut(s) 1011
PciI ACATGT 2 cut(s) 346, 3970
PciSI GCTCTTC 1 cut(s) 1124
PctI GAATGC 4 cut(s) 293, 1194, 1219, 1707
PdmI GAANNNNTTC 4 cut(s) 642, 1110, 2868, 3717
PflFI GACNNNGTC 2 cut(s) 2783, 3073
PflMI CCANNNNNTGG 1 cut(s) 1522
PfoI TCCNGGA 2 cut(s) 1515, 3280
PkrI GCNGC 9 cut(s) 115, 457, 1189, 1420, 2852, 3000, 3742, 4169, 4249
PleI GAGTC 3 cut(s) 714, 1710, 2052
PmaCI CACGTG 1 cut(s) 3541
PmlI CACGTG 1 cut(s) 3541
PpsI GAGTC 3 cut(s) 714, 1710, 2052
Ppu21I YACGTR 1 cut(s) 3541
PscI ACATGT 2 cut(s) 346, 3970
PshBI ATTAAT 1 cut(s) 3272
PsiI TTATAA 2 cut(s) 1004, 4029
Psp1406I AACGTT 2 cut(s) 1676, 3247
Psp6I CCWGG 4 cut(s) 985, 1515, 1865, 1947
PspCI CACGTG 1 cut(s) 3541
PspGI CCWGG 4 cut(s) 985, 1515, 1865, 1947
PspN4I GGNNCC 8 cut(s) 181, 426, 778, 899, 2604, 2923, 4015, 4264
PspPI GGNCC 3 cut(s) 179, 983, 1945
PstI CTGCAG 3 cut(s) 1192, 2622, 3742
PstNI CAGNNNCTG 1 cut(s) 2626
PsuI RGATCY 8 cut(s) 337, 1074, 1681, 1963, 2911, 3138, 3323, 4068
PsyI GACNNNGTC 2 cut(s) 2783, 3073
RsaI GTAC 9 cut(s) 351, 778, 865, 907, 1147, 1313, 3496, 3870, 4087
RsaNI GTAC 9 cut(s) 350, 777, 864, 906, 1146, 1312, 3495, 3869, 4086
RseI CAYNNNNRTG 9 cut(s) 108, 1128, 1463, 1499, 1587, 1700, 2462, 3274, 3438
SapI GCTCTTC 1 cut(s) 1124
SatI GCNGC 9 cut(s) 114, 456, 1188, 1419, 2851, 2999, 3741, 4168, 4248
Sau96I GGNCC 3 cut(s) 179, 983, 1945
ScaI AGTACT 1 cut(s) 3870
SchI GAGTC 3 cut(s) 714, 1710, 2053
ScrFI CCNGG 6 cut(s) 987, 1517, 1563, 1867, 1949, 3282
SduI GDGCHC 5 cut(s) 429, 2445, 2825, 3938, 4222
SexAI ACCWGGT 1 cut(s) 1947
SfaNI GCATC 7 cut(s) 694, 1226, 1491, 1765, 3190, 3688, 4154
SfcI CTRYAG 9 cut(s) 873, 966, 1188, 2286, 2350, 2572, 2618, 3738, 4315
Sfr274I CTCGAG 1 cut(s) 1011
SfuI TTCGAA 2 cut(s) 735, 1812
SinI GGWCC 2 cut(s) 179, 1945
SlaI CTCGAG 1 cut(s) 1011
SmiMI CAYNNNNRTG 9 cut(s) 108, 1128, 1463, 1499, 1587, 1700, 2462, 3274, 3438
SspI AATATT 3 cut(s) 957, 2122, 3337
SspMI CTAG 6 cut(s) 99, 839, 1040, 3032, 3744, 4215
StyD4I CCNGG 6 cut(s) 985, 1515, 1561, 1865, 1947, 3280
StyI CCWWGG 3 cut(s) 1941, 3989, 4125
TaaI ACNGT 9 cut(s) 493, 746, 804, 2408, 2440, 2783, 3073, 3779, 4003
TaiI ACGT 7 cut(s) 936, 1679, 3121, 3210, 3250, 3543, 3651
TatI WGTACW 5 cut(s) 863, 1145, 1311, 3494, 3868
TauI GCSGC 1 cut(s) 3001
TscAI CASTG 6 cut(s) 749, 2351, 2445, 2714, 3021, 3090
TseFI GTSAC 3 cut(s) 2777, 3085, 3779
TseI GCWGC 8 cut(s) 113, 455, 1187, 1418, 2850, 3740, 4167, 4247
Tsp45I GTSAC 3 cut(s) 2777, 3085, 3779
TspGWI ACGGA 5 cut(s) 208, 431, 2160, 3332, 4214
TspRI CASTG 6 cut(s) 749, 2351, 2445, 2714, 3021, 3090
Tth111I GACNNNGTC 2 cut(s) 2783, 3073
Van91I CCANNNNNTGG 1 cut(s) 1522
Vha464I CTTAAG 1 cut(s) 3065
VpaK11BI GGWCC 2 cut(s) 179, 1945
VspI ATTAAT 1 cut(s) 3272
XbaI TCTAGA 1 cut(s) 3031
XceI RCATGY 3 cut(s) 350, 1374, 3974
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XhoI CTCGAG 1 cut(s) 1011
XmnI GAANNNNTTC 4 cut(s) 642, 1110, 2868, 3717
XspI CTAG 6 cut(s) 99, 839, 1040, 3032, 3744, 4215
ZrmI AGTACT 1 cut(s) 3870
Zsp2I ATGCAT 3 cut(s) 1506, 1707, 3883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.