pycom05g13730

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
17244607 .. 17247702
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g13730.4

Sequence Viewer

Length: 2481 bp
ATGGACGTTGCTTCTTCTTCTTCTTCATCCGCTGCTGATAACCCCCCACGTCGAGAAAAGTATGATGTGTTTATCAATTTCAGAGGTGAGGACACCCGCCTTGGTATTACCAGCCATCTTCATGCTGCCTTACTTCAGAAGAAAATTGAAACCTACATCGATAACAGACTTCAGAGAGGAGAAGAAATCGGACCTGCCCTTCTAGAAGCAATCGAGAAATCCACCATTTCGGTGATCATTTTCTCACAAAACTATGCTTCTTCCACATGGTGTCTGGATGAGCTTGTGCATATACTCAAATGCAACAACAGAGAAGGCCGGATGGTTATACCCGTATTCTATGACATCAATCCATCTGATGTACGAAAACAACACGGGAGTTATGCAGATGCATTTGCTCAACTTGAAAAACGATTCGCTAACAATATTGACAAGGTGCACAAGTGGAGGGATGCTTTGACGACTGCAGCCAATCTATCTGGGTTTGATCATTCAAACAAATCCGGGACGGAGGTAGATCTAATTCAGAAAGTTGTCGATCATATTTGGACCCATATGTGTCGTGAATCATCCTACGATTTAAAGGGCTTTGTTGGAATTGAAGGCCGCATTAAGATGATCGAATCGCTATTAAGCATTCATTCACCGGATGGTTGCATCACTGTAGGTATTTGGGGCATGGGTGGTATTGGCAAGACTACCCTTGCTGAAATTGTGTTTCACAAACTCTCTTCTAAATTCGAAGCCTCCTGTTTTCTTAGAAATGTTAGGGAGAGAGAACAAAAAGATGGGTTAGAAGAGTTGCAAAAAACACTTGTTAAGGAGATATTAAAGGAAGAAAGTTCATCCATAGGATCAACTTATGTTCGAGAAAGGCTCAGTCGCACAAAGGTCCTCATTGCTCTTGATGATGTGAGTGATTCAATGCAATTGGAACATTTAGCTGGCGATCGTCTTCTGTATGGCACTGGAAGTAGAATCATTATCACAAGTAGAGATAGAGGTACACTTGGGCAAACTGTTGAAGAGGGTAATATCTACGAGGTTGAGGTATTAAAACCAAATGACGCTTTTCAGCTCTTCTATTCACGTGCTTTCAAGAATAACAGTACTCATAAAACAGATTATAAGGAGTCGGCAAAAAAGGTTGTGCATTATGCCAAAGGCGTTCTTTTAGCTCTTATAGTTCTGGGGTCGTCGTTCTTCAATTGCAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACGATTTCCCAGTGAAAGTATCCAGAAAGTATTGAGAATAAGTTATGATAGATTGGAAATAAATGAGAAGGAGATATTTCTGGATATAGCATGTTTTTTTAAAAGGTGGCCTATGGATGAGGTAAAACAAATGTTAGATCTTCGTGGATTTTTTGCGACAGTTGGAATTAGAATTCTCATTAATATGTCTCTCATATCAATTGATTCAAAATGGGGAAAGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAAGACAATTGTTCAGGAACAATGTATTAAAGATCCCTGTAAACGGAATAGGTTGTTCACTAATGAGGATGTCTATCGTGTATTGAAGAGTAACACGGAAACTCCAAATGTTGAAGCCATACGAGTTGATTGGTCTTACATTGAAACGCGAGCATTGAAACGTGCAGACTTCGAAAAGATGTCTAATCTTATAATGCTAATTGCGGTTGATGGCTACCAACTCACCGCTTCTCTAGACCTCGTTGATTCTCTTCGTTATCTTGAGTGGCCCAGATATCCATTGGAATCTTTGCCGTCAAATTTTTGTCCTGAAAATCTAGTTGAGCTTCATATGCGACAGAGCAAAGTTAAGAAGCTTTGGAACGGAGACCAGCAAGTACTTGTGAACTTACAAGTGATCGATCTGCATCACTCTAAAAATCTAACTGAAATCTCTAGGGCTGTGAAAGGATGGTTGAAGTTCCATCGTATTTTCAACATCTGGACAAGCTTACTCATCTTAATCTTGGAAACTGCAAGCGTCTCAAGTATCTTCCAGAGAAAGGAGTTGCCTGAATCAGTTTGGTCTAACGAAAATATTTCTTACTTCAATATAAGATATTGCAGAGACCTTGAGAAACTTCCAAGCAATAGATGTAAGATGAAATTCTCTGGTAGTTTTTATCTAGATGGCTGCACATCTCTTCGCGAGTTTTCTGAGCTTCCCCGGGATATAAGTAAATTATCATTGGTTGGTTGCAAGAGACTTGTGAGTCTACCAAACGACATTTGTAAGTTGAAATGTCTCAAGGAACTCGATCTCTCTGAGTGCTCTAAACTTGAAAACTACCAAGAGATCGTGGAGCTGATGGAACATCGGCCCTTAATTACACGTGGGCCATTAATGAAACGTGGGCCCTATGCTCAGTTTACTGCCTCGATGACCTTTAATGACAACTGGAGAATATGGAAGTCAAGGCCCTATACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

827

Amino Acids

95.24

Weight (kDa)

7.98

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1128, 1703
AasI GACNNNNNNGTC 1 cut(s) 2262
Acc36I ACCTGC 1 cut(s) 202
AccI GTMKAC 1 cut(s) 2266
AccII CGCG 2 cut(s) 1660, 2199
AciI CCGC 5 cut(s) 30, 97, 607, 1715, 1737
AclWI GGATC 2 cut(s) 862, 1538
AcsI RAATTY 5 cut(s) 737, 1238, 1425, 1810, 2156
AcuI CTGAAG 2 cut(s) 119, 155
AcvI CACGTG 2 cut(s) 1091, 2384
AdeI CACNNNGTG 1 cut(s) 270
AfaI GTAC 4 cut(s) 363, 1006, 1111, 1890
AfiI CCNNNNNNNGG 2 cut(s) 1554, 2053
AflIII ACRYGT 1 cut(s) 2381
AjiI CACGTC 1 cut(s) 50
AluBI AGCT 9 cut(s) 283, 944, 1078, 1178, 1837, 1867, 2001, 2212, 2356
AluI AGCT 9 cut(s) 283, 944, 1078, 1178, 1837, 1867, 2001, 2212, 2356
Alw21I GWGCWC 2 cut(s) 441, 2324
Alw26I GTCTC 6 cut(s) 1446, 1872, 2038, 2112, 2248, 2300
Alw44I GTGCAC 1 cut(s) 437
AlwI GGATC 2 cut(s) 862, 1538
Ama87I CYCGRG 1 cut(s) 2217
AoxI GGCC 8 cut(s) 316, 604, 1361, 1778, 2369, 2387, 2405, 2468
ApaI GGGCCC 1 cut(s) 2409
ApaLI GTGCAC 1 cut(s) 437
ApeKI GCWGC 4 cut(s) 32, 125, 467, 2184
ApoI RAATTY 5 cut(s) 737, 1238, 1425, 1810, 2156
AseI ATTAAT 2 cut(s) 1434, 2393
AspS9I GGNCC 9 cut(s) 191, 549, 892, 1779, 2370, 2387, 2405, 2406, 2469
AsuC2I CCSGG 3 cut(s) 505, 2218, 2219
AsuHPI GGTGA 4 cut(s) 98, 244, 636, 1726
AsuII TTCGAA 2 cut(s) 741, 1683
AvaI CYCGRG 1 cut(s) 2217
AvaII GGWCC 3 cut(s) 191, 549, 892
BaeGI GKGCMC 2 cut(s) 441, 2409
BanII GRGCYC 1 cut(s) 2409
BbrPI CACGTG 2 cut(s) 1091, 2384
BbsI GAAGAC 1 cut(s) 947
Bbv12I GWGCWC 2 cut(s) 441, 2324
BbvI GCAGC 4 cut(s) 19, 112, 479, 2171
BceAI ACGGC 1 cut(s) 1789
BciVI GTATCC 1 cut(s) 1283
BclI TGATCA 2 cut(s) 234, 487
BcnI CCSGG 3 cut(s) 505, 2218, 2219
BcoDI GTCTC 6 cut(s) 1446, 1872, 2038, 2112, 2248, 2300
BfaI CTAG 5 cut(s) 203, 1745, 1829, 1947, 2177
BfmI CTRYAG 2 cut(s) 465, 663
BfuAI ACCTGC 1 cut(s) 202
BfuI GTATCC 1 cut(s) 1283
BglII AGATCT 2 cut(s) 517, 1390
BisI GCNGC 5 cut(s) 33, 126, 468, 607, 2185
BlsI GCNGC 5 cut(s) 34, 127, 469, 608, 2186
BmcAI AGTACT 2 cut(s) 1111, 1890
Bme1390I CCNGG 3 cut(s) 505, 2218, 2219
Bme18I GGWCC 3 cut(s) 191, 549, 892
BmeT110I CYCGRG 1 cut(s) 2217
BmgBI CACGTC 1 cut(s) 50
BmgT120I GGNCC 9 cut(s) 191, 549, 892, 1779, 2370, 2387, 2405, 2406, 2469
BmiI GGNNCC 2 cut(s) 551, 2407
BmrFI CCNGG 3 cut(s) 505, 2218, 2219
BmrI ACTGGG 1 cut(s) 1257
BmsI GCATC 5 cut(s) 379, 442, 666, 1476, 1927
BmuI ACTGGG 1 cut(s) 1257
BpiI GAAGAC 1 cut(s) 947
BplI GAGNNNNNCTC 2 cut(s) 861, 893
BpmI CTGGAG 1 cut(s) 2470
Bpu14I TTCGAA 2 cut(s) 741, 1683
BpuEI CTTGAG 4 cut(s) 1793, 2020, 2144, 2282
BpuMI CCSGG 3 cut(s) 505, 2218, 2219
Bsa29I ATCGAT 2 cut(s) 159, 1911
BsaAI YACGTR 3 cut(s) 1091, 2384, 2478
BsaBI GATNNNNATC 2 cut(s) 1584, 1917
BsaI GGTCTC 2 cut(s) 1872, 2112
BsaJI CCNNGG 3 cut(s) 100, 2216, 2217
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 2 cut(s) 1554, 2053
Bse1I ACTGG 3 cut(s) 973, 1263, 2453
Bse3DI GCAATG 1 cut(s) 897
Bse8I GATNNNNATC 2 cut(s) 1584, 1917
BseCI ATCGAT 2 cut(s) 159, 1911
BseDI CCNNGG 3 cut(s) 100, 2216, 2217
BseJI GATNNNNATC 2 cut(s) 1584, 1917
BseLI CCNNNNNNNGG 2 cut(s) 1554, 2053
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 4 cut(s) 892, 2199, 2307, 2429
BseNI ACTGG 3 cut(s) 973, 1263, 2453
BseRI GAGGAG 1 cut(s) 192
BseSI GKGCMC 2 cut(s) 441, 2409
BseXI GCAGC 4 cut(s) 19, 112, 479, 2171
BsgI GTGCAG 2 cut(s) 1695, 2170
Bsh1236I CGCG 2 cut(s) 1660, 2199
Bsh1285I CGRYCG 1 cut(s) 952
BshFI GGCC 8 cut(s) 318, 606, 1363, 1780, 2371, 2389, 2407, 2470
BshVI ATCGAT 2 cut(s) 159, 1911
BsiEI CGRYCG 1 cut(s) 952
BsiHKAI GWGCWC 2 cut(s) 441, 2324
BsiHKCI CYCGRG 1 cut(s) 2217
BsiSI CCGG 4 cut(s) 319, 504, 647, 2218
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 2 cut(s) 1554, 2053
BsmAI GTCTC 6 cut(s) 1446, 1872, 2038, 2112, 2248, 2300
BsmBI CGTCTC 1 cut(s) 2038
BsmFI GGGAC 1 cut(s) 520
BsmI GAATGC 1 cut(s) 636
BsnI GGCC 8 cut(s) 318, 606, 1363, 1780, 2371, 2389, 2407, 2470
Bso31I GGTCTC 2 cut(s) 1872, 2112
BsoBI CYCGRG 1 cut(s) 2217
Bsp119I TTCGAA 2 cut(s) 741, 1683
Bsp120I GGGCCC 1 cut(s) 2405
Bsp1286I GDGCHC 3 cut(s) 441, 2324, 2409
Bsp68I TCGCGA 1 cut(s) 2199
BspACI CCGC 5 cut(s) 30, 97, 607, 1715, 1737
BspANI GGCC 8 cut(s) 318, 606, 1363, 1780, 2371, 2389, 2407, 2470
BspCNI CTCAG 4 cut(s) 891, 2200, 2308, 2428
BspDI ATCGAT 2 cut(s) 159, 1911
BspFNI CGCG 2 cut(s) 1660, 2199
BspLI GGNNCC 2 cut(s) 551, 2407
BspMAI CTGCAG 1 cut(s) 469
BspMI ACCTGC 1 cut(s) 202
BspPI GGATC 2 cut(s) 862, 1538
BspQI GCTCTTC 1 cut(s) 1085
BspT104I TTCGAA 2 cut(s) 741, 1683
BspTNI GGTCTC 2 cut(s) 1872, 2112
BsrDI GCAATG 1 cut(s) 897
BsrI ACTGG 3 cut(s) 973, 1263, 2453
BssECI CCNNGG 3 cut(s) 100, 2216, 2217
BssT1I CCWWGG 1 cut(s) 100
Bst4CI ACNGT 4 cut(s) 664, 1021, 1109, 1414
Bst6I CTCTTC 7 cut(s) 736, 792, 1020, 1085, 1592, 1767, 2199
BstAPI GCANNNNNTGC 1 cut(s) 1495
BstBAI YACGTR 3 cut(s) 1091, 2384, 2478
BstBI TTCGAA 2 cut(s) 741, 1683
BstC8I GCNNGC 3 cut(s) 946, 1662, 2029
BstDEI CTNAG 5 cut(s) 758, 878, 2208, 2316, 2415
BstFNI CGCG 2 cut(s) 1660, 2199
BstMAI GTCTC 6 cut(s) 1446, 1872, 2038, 2112, 2248, 2300
BstMCI CGRYCG 1 cut(s) 952
BstMWI GCNNNNNNNGC 2 cut(s) 1495, 1843
BstNSI RCATGY 1 cut(s) 1347
BstSCI CCNGG 3 cut(s) 503, 2216, 2217
BstSFI CTRYAG 2 cut(s) 465, 663
BstSLI GKGCMC 2 cut(s) 441, 2409
BstSNI TACGTA 1 cut(s) 2478
BstUI CGCG 2 cut(s) 1660, 2199
BstV1I GCAGC 4 cut(s) 19, 112, 479, 2171
BstV2I GAAGAC 1 cut(s) 947
BstX2I RGATCY 3 cut(s) 517, 1390, 1543
BstYI RGATCY 3 cut(s) 517, 1390, 1543
Bsu15I ATCGAT 2 cut(s) 159, 1911
BsuI GTATCC 1 cut(s) 1283
BsuRI GGCC 8 cut(s) 318, 606, 1363, 1780, 2371, 2389, 2407, 2470
BsuTUI ATCGAT 2 cut(s) 159, 1911
BtrI CACGTC 1 cut(s) 50
BtsIMutI CAGTG 3 cut(s) 660, 966, 1270
BtuMI TCGCGA 1 cut(s) 2199
BveI ACCTGC 1 cut(s) 202
Cac8I GCNNGC 3 cut(s) 946, 1662, 2029
Cfr13I GGNCC 9 cut(s) 191, 549, 892, 1779, 2370, 2387, 2405, 2406, 2469
Cfr9I CCCGGG 1 cut(s) 2217
ClaI ATCGAT 2 cut(s) 159, 1911
CseI GACGC 2 cut(s) 1076, 2020
Csp6I GTAC 4 cut(s) 362, 1005, 1110, 1889
CviAII CATG 4 cut(s) 122, 267, 679, 1344
CviQI GTAC 4 cut(s) 362, 1005, 1110, 1889
DdeI CTNAG 5 cut(s) 758, 878, 2208, 2316, 2415
DraI TTTAAA 2 cut(s) 582, 1354
DraIII CACNNNGTG 1 cut(s) 270
DrdI GACNNNNNNGTC 1 cut(s) 2262
DseDI GACNNNNNNGTC 1 cut(s) 2262
Eam1104I CTCTTC 7 cut(s) 736, 792, 1020, 1085, 1592, 1767, 2199
EarI CTCTTC 7 cut(s) 736, 792, 1020, 1085, 1592, 1767, 2199
Eco105I TACGTA 1 cut(s) 2478
Eco130I CCWWGG 1 cut(s) 100
Eco24I GRGCYC 1 cut(s) 2409
Eco31I GGTCTC 2 cut(s) 1872, 2112
Eco32I GATATC 1 cut(s) 1787
Eco47I GGWCC 3 cut(s) 191, 549, 892
Eco57I CTGAAG 2 cut(s) 119, 155
Eco72I CACGTG 2 cut(s) 1091, 2384
Eco88I CYCGRG 1 cut(s) 2217
EcoO109I RGGNCCY 3 cut(s) 892, 2406, 2469
EcoRI GAATTC 2 cut(s) 1238, 1425
EcoRV GATATC 1 cut(s) 1787
EcoT14I CCWWGG 1 cut(s) 100
EcoT22I ATGCAT 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 2409
ErhI CCWWGG 1 cut(s) 100
Esp3I CGTCTC 1 cut(s) 2038
FaeI CATG 4 cut(s) 125, 270, 682, 1347
FalI AAGNNNNNCTT 2 cut(s) 1155, 1187
FaqI GGGAC 1 cut(s) 520
FatI CATG 4 cut(s) 121, 266, 678, 1343
FauI CCCGC 1 cut(s) 104
FauNDI CATATG 2 cut(s) 555, 1842
FbaI TGATCA 2 cut(s) 234, 487
FblI GTMKAC 1 cut(s) 2266
Fnu4HI GCNGC 5 cut(s) 33, 126, 468, 607, 2185
FriOI GRGCYC 1 cut(s) 2409
Fsp4HI GCNGC 5 cut(s) 33, 126, 468, 607, 2185
FspBI CTAG 5 cut(s) 203, 1745, 1829, 1947, 2177
GluI GCNGC 5 cut(s) 33, 126, 468, 607, 2185
GsuI CTGGAG 1 cut(s) 2470
HaeIII GGCC 8 cut(s) 318, 606, 1363, 1780, 2371, 2389, 2407, 2470
HapII CCGG 4 cut(s) 319, 504, 647, 2218
HgaI GACGC 2 cut(s) 1076, 2020
Hin1II CATG 4 cut(s) 125, 270, 682, 1347
HindIII AAGCTT 2 cut(s) 1865, 1999
HpaII CCGG 4 cut(s) 319, 504, 647, 2218
HphI GGTGA 4 cut(s) 98, 244, 636, 1726
Hpy166II GTNNAC 7 cut(s) 439, 1007, 1553, 1569, 1897, 2267, 2421
Hpy188I TCNGA 8 cut(s) 83, 138, 174, 191, 358, 528, 2209, 2317
Hpy8I GTNNAC 7 cut(s) 439, 1007, 1553, 1569, 1897, 2267, 2421
Hpy99I CGWCG 2 cut(s) 54, 1201
HpyAV CCTTC 4 cut(s) 209, 308, 596, 1315
HpyCH4III ACNGT 4 cut(s) 664, 1021, 1109, 1414
HpyCH4IV ACGT 7 cut(s) 6, 49, 1090, 1672, 2383, 2401, 2477
HpyF10VI GCNNNNNNNGC 2 cut(s) 1495, 1843
HpyF3I CTNAG 5 cut(s) 758, 878, 2208, 2316, 2415
HpySE526I ACGT 7 cut(s) 6, 49, 1090, 1672, 2383, 2401, 2477
Hsp92II CATG 4 cut(s) 125, 270, 682, 1347
Ksp22I TGATCA 2 cut(s) 234, 487
LguI GCTCTTC 1 cut(s) 1085
LmnI GCTCC 1 cut(s) 2353
Lsp1109I GCAGC 4 cut(s) 19, 112, 479, 2171
LweI GCATC 5 cut(s) 379, 442, 666, 1476, 1927
MaeI CTAG 5 cut(s) 203, 1745, 1829, 1947, 2177
MaeII ACGT 7 cut(s) 6, 49, 1090, 1672, 2383, 2401, 2477
MaeIII GTNAC 1 cut(s) 1601
MfeI CAATTG 4 cut(s) 929, 1207, 1452, 1518
MflI RGATCY 3 cut(s) 517, 1390, 1543
MhlI GDGCHC 3 cut(s) 441, 2324, 2409
MlyI GAGTC 2 cut(s) 1142, 2272
MmeI TCCRAC 2 cut(s) 574, 1396
Mph1103I ATGCAT 1 cut(s) 394
MslI CAYNNNNRTG 5 cut(s) 120, 230, 614, 1436, 1484
MspA1I CMGCKG 1 cut(s) 32
MspI CCGG 4 cut(s) 319, 504, 647, 2218
MspR9I CCNGG 3 cut(s) 505, 2218, 2219
MunI CAATTG 4 cut(s) 929, 1207, 1452, 1518
Mva1269I GAATGC 1 cut(s) 636
MvnI CGCG 2 cut(s) 1660, 2199
MwoI GCNNNNNNNGC 2 cut(s) 1495, 1843
NciI CCSGG 3 cut(s) 505, 2218, 2219
NdeI CATATG 2 cut(s) 555, 1842
NlaIII CATG 4 cut(s) 125, 270, 682, 1347
NlaIV GGNNCC 2 cut(s) 551, 2407
NruI TCGCGA 1 cut(s) 2199
NsiI ATGCAT 1 cut(s) 394
NspI RCATGY 1 cut(s) 1347
NspV TTCGAA 2 cut(s) 741, 1683
PciSI GCTCTTC 1 cut(s) 1085
PctI GAATGC 1 cut(s) 636
PfeI GAWTC 9 cut(s) 414, 566, 623, 920, 978, 1457, 1757, 1796, 2066
PfoI TCCNGGA 1 cut(s) 503
PkrI GCNGC 5 cut(s) 34, 127, 469, 608, 2186
Ple19I CGATCG 1 cut(s) 952
PleI GAGTC 2 cut(s) 1141, 2271
PmaCI CACGTG 2 cut(s) 1091, 2384
PmlI CACGTG 2 cut(s) 1091, 2384
PpsI GAGTC 2 cut(s) 1141, 2271
Ppu21I YACGTR 3 cut(s) 1091, 2384, 2478
PpuMI RGGWCCY 1 cut(s) 892
PshBI ATTAAT 2 cut(s) 1434, 2393
PsiI TTATAA 2 cut(s) 1128, 1703
Psp5II RGGWCCY 1 cut(s) 892
PspCI CACGTG 2 cut(s) 1091, 2384
PspN4I GGNNCC 2 cut(s) 551, 2407
PspOMI GGGCCC 1 cut(s) 2405
PspPI GGNCC 9 cut(s) 191, 549, 892, 1779, 2370, 2387, 2405, 2406, 2469
PspPPI RGGWCCY 1 cut(s) 892
PstI CTGCAG 1 cut(s) 469
PsuI RGATCY 3 cut(s) 517, 1390, 1543
PvuI CGATCG 1 cut(s) 952
RruI TCGCGA 1 cut(s) 2199
RsaI GTAC 4 cut(s) 363, 1006, 1111, 1890
RsaNI GTAC 4 cut(s) 362, 1005, 1110, 1889
RseI CAYNNNNRTG 5 cut(s) 120, 230, 614, 1436, 1484
SapI GCTCTTC 1 cut(s) 1085
SatI GCNGC 5 cut(s) 33, 126, 468, 607, 2185
Sau96I GGNCC 9 cut(s) 191, 549, 892, 1779, 2370, 2387, 2405, 2406, 2469
ScaI AGTACT 2 cut(s) 1111, 1890
SchI GAGTC 2 cut(s) 1142, 2272
ScrFI CCNGG 3 cut(s) 505, 2218, 2219
SduI GDGCHC 3 cut(s) 441, 2324, 2409
SfaNI GCATC 5 cut(s) 379, 442, 666, 1476, 1927
SfcI CTRYAG 2 cut(s) 465, 663
SfuI TTCGAA 2 cut(s) 741, 1683
SinI GGWCC 3 cut(s) 191, 549, 892
SmaI CCCGGG 1 cut(s) 2219
SmiMI CAYNNNNRTG 5 cut(s) 120, 230, 614, 1436, 1484
SmlI CTYRAG 4 cut(s) 1772, 2035, 2123, 2297
SmoI CTYRAG 4 cut(s) 1772, 2035, 2123, 2297
SnaBI TACGTA 1 cut(s) 2478
SsiI CCGC 5 cut(s) 30, 97, 607, 1715, 1737
SspI AATATT 2 cut(s) 427, 2089
SspMI CTAG 5 cut(s) 203, 1745, 1829, 1947, 2177
StyD4I CCNGG 3 cut(s) 503, 2216, 2217
StyI CCWWGG 1 cut(s) 100
TaaI ACNGT 4 cut(s) 664, 1021, 1109, 1414
TaiI ACGT 7 cut(s) 9, 52, 1093, 1675, 2386, 2404, 2480
TatI WGTACW 2 cut(s) 1109, 1888
TauI GCSGC 1 cut(s) 609
TfiI GAWTC 9 cut(s) 414, 566, 623, 920, 978, 1457, 1757, 1796, 2066
TscAI CASTG 3 cut(s) 667, 973, 1270
TseI GCWGC 4 cut(s) 32, 125, 467, 2184
TspDTI ATGAA 8 cut(s) 15, 110, 629, 834, 1251, 1829, 2168, 2411
TspGWI ACGGA 4 cut(s) 524, 1570, 1622, 1890
TspMI CCCGGG 1 cut(s) 2217
TspRI CASTG 3 cut(s) 667, 973, 1270
VneI GTGCAC 1 cut(s) 437
VpaK11BI GGWCC 3 cut(s) 191, 549, 892
VspI ATTAAT 2 cut(s) 1434, 2393
XapI RAATTY 5 cut(s) 737, 1238, 1425, 1810, 2156
XbaI TCTAGA 3 cut(s) 202, 1744, 2176
XceI RCATGY 1 cut(s) 1347
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 1789
XmaI CCCGGG 1 cut(s) 2217
XmiI GTMKAC 1 cut(s) 2266
XspI CTAG 5 cut(s) 203, 1745, 1829, 1947, 2177
ZrmI AGTACT 2 cut(s) 1111, 1890
Zsp2I ATGCAT 1 cut(s) 394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.