Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_14 | PF23598 | 4 - 57 | 2.1e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 48 - 128 | 2.5e-06 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 96 - 280 | 4.9e-17 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 120 - 176 | 1.7e-06 | Leucine-rich repeat region |
| C-JID | PF20160 | 358 - 501 | 2e-15 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 699, 879, 1395, 1443, 1455 |
| AclWI | GGATC | 3 cut(s) | 381, 1113, 1126 |
| AcsI | RAATTY | 6 cut(s) | 25, 242, 925, 1022, 1034, 1165 |
| AcuI | CTGAAG | 3 cut(s) | 313, 1041, 1419 |
| AfaI | GTAC | 2 cut(s) | 1291, 1422 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 654 |
| AjnI | CCWGG | 4 cut(s) | 366, 468, 941, 1075 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 414, 446 |
| AluBI | AGCT | 9 cut(s) | 82, 327, 406, 642, 772, 817, 1104, 1138, 1181 |
| AluI | AGCT | 9 cut(s) | 82, 327, 406, 642, 772, 817, 1104, 1138, 1181 |
| Alw21I | GWGCWC | 1 cut(s) | 774 |
| Alw26I | GTCTC | 6 cut(s) | 218, 269, 295, 480, 815, 1016 |
| AlwI | GGATC | 3 cut(s) | 381, 1113, 1126 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1064 |
| AoxI | GGCC | 1 cut(s) | 718 |
| ApeKI | GCWGC | 1 cut(s) | 807 |
| ApoI | RAATTY | 6 cut(s) | 25, 242, 925, 1022, 1034, 1165 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 243, 275 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 621 |
| AspLEI | GCGC | 1 cut(s) | 1286 |
| AsuHPI | GGTGA | 2 cut(s) | 1271, 1331 |
| AxyI | CCTNAGG | 1 cut(s) | 722 |
| BamHI | GGATCC | 1 cut(s) | 1118 |
| BanII | GRGCYC | 1 cut(s) | 774 |
| BbsI | GAAGAC | 1 cut(s) | 567 |
| Bbv12I | GWGCWC | 1 cut(s) | 774 |
| BbvI | GCAGC | 1 cut(s) | 794 |
| BccI | CCATC | 3 cut(s) | 518, 710, 1275 |
| BceAI | ACGGC | 1 cut(s) | 1002 |
| BciT130I | CCWGG | 4 cut(s) | 368, 470, 943, 1077 |
| BclI | TGATCA | 1 cut(s) | 1321 |
| BcoDI | GTCTC | 6 cut(s) | 218, 269, 295, 480, 815, 1016 |
| BfaI | CTAG | 6 cut(s) | 57, 74, 324, 428, 590, 608 |
| BfmI | CTRYAG | 2 cut(s) | 39, 1468 |
| BisI | GCNGC | 2 cut(s) | 808, 1395 |
| BlsI | GCNGC | 2 cut(s) | 809, 1396 |
| Bme1390I | CCNGG | 4 cut(s) | 368, 470, 943, 1077 |
| BmiI | GGNNCC | 3 cut(s) | 354, 728, 1120 |
| BmrFI | CCNGG | 4 cut(s) | 368, 470, 943, 1077 |
| BmsI | GCATC | 5 cut(s) | 308, 498, 787, 952, 1150 |
| BpiI | GAAGAC | 1 cut(s) | 567 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 292, 324, 679, 711, 1034, 1066 |
| BpmI | CTGGAG | 4 cut(s) | 389, 491, 676, 839 |
| BpuEI | CTTGAG | 2 cut(s) | 317, 1001 |
| BsaAI | YACGTR | 1 cut(s) | 584 |
| BsaJI | CCNNGG | 2 cut(s) | 598, 1076 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 756, 786, 812, 842 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 654 |
| Bse21I | CCTNAGG | 1 cut(s) | 722 |
| BseBI | CCWGG | 4 cut(s) | 368, 470, 943, 1077 |
| BseDI | CCNNGG | 2 cut(s) | 598, 1076 |
| BseGI | GGATG | 5 cut(s) | 323, 533, 868, 937, 964 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 654 |
| BseMII | CTCAG | 1 cut(s) | 713 |
| BseRI | GAGGAG | 1 cut(s) | 1004 |
| BseXI | GCAGC | 1 cut(s) | 794 |
| BsgI | GTGCAG | 2 cut(s) | 828, 1469 |
| BshFI | GGCC | 1 cut(s) | 720 |
| BsiHKAI | GWGCWC | 1 cut(s) | 774 |
| BslFI | GGGAC | 1 cut(s) | 190 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 654 |
| BsmAI | GTCTC | 6 cut(s) | 218, 269, 295, 480, 815, 1016 |
| BsmFI | GGGAC | 1 cut(s) | 190 |
| BsmI | GAATGC | 1 cut(s) | 943 |
| BsnI | GGCC | 1 cut(s) | 720 |
| Bsp1286I | GDGCHC | 1 cut(s) | 774 |
| Bsp1407I | TGTACA | 1 cut(s) | 1420 |
| Bsp143I | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| Bsp19I | CCATGG | 1 cut(s) | 598 |
| BspACI | CCGC | 5 cut(s) | 699, 879, 1395, 1443, 1455 |
| BspANI | GGCC | 1 cut(s) | 720 |
| BspCNI | CTCAG | 1 cut(s) | 714 |
| BspHI | TCATGA | 2 cut(s) | 895, 1156 |
| BspLI | GGNNCC | 3 cut(s) | 354, 728, 1120 |
| BspMAI | CTGCAG | 1 cut(s) | 43 |
| BspPI | GGATC | 3 cut(s) | 381, 1113, 1126 |
| BsrGI | TGTACA | 1 cut(s) | 1420 |
| BssECI | CCNNGG | 2 cut(s) | 598, 1076 |
| BssMI | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| BssT1I | CCWWGG | 1 cut(s) | 598 |
| Bst2UI | CCWGG | 4 cut(s) | 368, 470, 943, 1077 |
| Bst4CI | ACNGT | 5 cut(s) | 212, 826, 1252, 1280, 1469 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 223 |
| BstAUI | TGTACA | 1 cut(s) | 1420 |
| BstBAI | YACGTR | 1 cut(s) | 584 |
| BstC8I | GCNNGC | 3 cut(s) | 1437, 1441, 1496 |
| BstDEI | CTNAG | 4 cut(s) | 377, 722, 971, 1007 |
| BstDSI | CCRYGG | 1 cut(s) | 598 |
| BstF5I | GGATG | 5 cut(s) | 323, 533, 868, 937, 964 |
| BstHHI | GCGC | 1 cut(s) | 1286 |
| BstKTI | GATC | 6 cut(s) | 62, 376, 892, 1121, 1324, 1336 |
| BstMAI | GTCTC | 6 cut(s) | 218, 269, 295, 480, 815, 1016 |
| BstMBI | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 639, 1187, 1400, 1470 |
| BstNI | CCWGG | 4 cut(s) | 368, 470, 943, 1077 |
| BstNSI | RCATGY | 1 cut(s) | 1439 |
| BstSCI | CCNGG | 4 cut(s) | 366, 468, 941, 1075 |
| BstSFI | CTRYAG | 2 cut(s) | 39, 1468 |
| BstV1I | GCAGC | 1 cut(s) | 794 |
| BstV2I | GAAGAC | 1 cut(s) | 567 |
| BstX2I | RGATCY | 2 cut(s) | 373, 1118 |
| BstYI | RGATCY | 2 cut(s) | 373, 1118 |
| Bsu36I | CCTNAGG | 1 cut(s) | 722 |
| BsuRI | GGCC | 1 cut(s) | 720 |
| BtgI | CCRYGG | 1 cut(s) | 598 |
| BtsCI | GGATG | 5 cut(s) | 323, 533, 868, 937, 964 |
| BtsIMutI | CAGTG | 1 cut(s) | 831 |
| Cac8I | GCNNGC | 3 cut(s) | 1437, 1441, 1496 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1064 |
| CciI | TCATGA | 2 cut(s) | 895, 1156 |
| CfoI | GCGC | 1 cut(s) | 1286 |
| CseI | GACGC | 1 cut(s) | 702 |
| Csp6I | GTAC | 2 cut(s) | 1290, 1421 |
| CviAII | CATG | 7 cut(s) | 599, 679, 811, 896, 1157, 1212, 1436 |
| CviQI | GTAC | 2 cut(s) | 1290, 1421 |
| DdeI | CTNAG | 4 cut(s) | 377, 722, 971, 1007 |
| DpnI | GATC | 6 cut(s) | 61, 375, 891, 1120, 1323, 1335 |
| DpnII | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| DraI | TTTAAA | 1 cut(s) | 501 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 223 |
| EarI | CTCTTC | 2 cut(s) | 42, 223 |
| EciI | GGCGGA | 1 cut(s) | 1458 |
| Ecl136II | GAGCTC | 1 cut(s) | 772 |
| Eco130I | CCWWGG | 1 cut(s) | 598 |
| Eco24I | GRGCYC | 1 cut(s) | 774 |
| Eco53kI | GAGCTC | 1 cut(s) | 772 |
| Eco57I | CTGAAG | 3 cut(s) | 313, 1041, 1419 |
| Eco81I | CCTNAGG | 1 cut(s) | 722 |
| EcoICRI | GAGCTC | 1 cut(s) | 772 |
| EcoRII | CCWGG | 4 cut(s) | 366, 468, 941, 1075 |
| EcoT14I | CCWWGG | 1 cut(s) | 598 |
| EcoT22I | ATGCAT | 1 cut(s) | 967 |
| EcoT38I | GRGCYC | 1 cut(s) | 774 |
| ErhI | CCWWGG | 1 cut(s) | 598 |
| FaeI | CATG | 7 cut(s) | 602, 682, 814, 899, 1160, 1215, 1439 |
| FaqI | GGGAC | 1 cut(s) | 190 |
| FatI | CATG | 7 cut(s) | 598, 678, 810, 895, 1156, 1211, 1435 |
| FauI | CCCGC | 1 cut(s) | 706 |
| FauNDI | CATATG | 1 cut(s) | 278 |
| FbaI | TGATCA | 1 cut(s) | 1321 |
| Fnu4HI | GCNGC | 2 cut(s) | 808, 1395 |
| FokI | GGATG | 5 cut(s) | 330, 540, 875, 944, 971 |
| FriOI | GRGCYC | 1 cut(s) | 774 |
| Fsp4HI | GCNGC | 2 cut(s) | 808, 1395 |
| FspBI | CTAG | 6 cut(s) | 57, 74, 324, 428, 590, 608 |
| GlaI | GCGC | 1 cut(s) | 1285 |
| GluI | GCNGC | 2 cut(s) | 808, 1395 |
| GsuI | CTGGAG | 4 cut(s) | 389, 491, 676, 839 |
| HaeIII | GGCC | 1 cut(s) | 720 |
| HgaI | GACGC | 1 cut(s) | 702 |
| HhaI | GCGC | 1 cut(s) | 1286 |
| Hin1II | CATG | 7 cut(s) | 602, 682, 814, 899, 1160, 1215, 1439 |
| Hin6I | GCGC | 1 cut(s) | 1284 |
| HinP1I | GCGC | 1 cut(s) | 1284 |
| HindIII | AAGCTT | 2 cut(s) | 80, 1136 |
| HinfI | GANTC | 3 cut(s) | 121, 473, 1328 |
| HphI | GGTGA | 2 cut(s) | 1271, 1331 |
| Hpy166II | GTNNAC | 3 cut(s) | 884, 1239, 1374 |
| Hpy188I | TCNGA | 5 cut(s) | 332, 1033, 1308, 1333, 1504 |
| Hpy8I | GTNNAC | 3 cut(s) | 884, 1239, 1374 |
| HpyAV | CCTTC | 4 cut(s) | 182, 308, 1065, 1109 |
| HpyCH4III | ACNGT | 5 cut(s) | 212, 826, 1252, 1280, 1469 |
| HpyCH4IV | ACGT | 1 cut(s) | 583 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 639, 1187, 1400, 1470 |
| HpyF3I | CTNAG | 4 cut(s) | 377, 722, 971, 1007 |
| HpySE526I | ACGT | 1 cut(s) | 583 |
| Hsp92II | CATG | 7 cut(s) | 602, 682, 814, 899, 1160, 1215, 1439 |
| HspAI | GCGC | 1 cut(s) | 1284 |
| Ksp22I | TGATCA | 1 cut(s) | 1321 |
| Kzo9I | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| LmnI | GCTCC | 3 cut(s) | 352, 777, 1042 |
| Lsp1109I | GCAGC | 1 cut(s) | 794 |
| LweI | GCATC | 5 cut(s) | 308, 498, 787, 952, 1150 |
| MaeI | CTAG | 6 cut(s) | 57, 74, 324, 428, 590, 608 |
| MaeII | ACGT | 1 cut(s) | 583 |
| MaeIII | GTNAC | 2 cut(s) | 828, 1195 |
| MalI | GATC | 6 cut(s) | 61, 375, 891, 1120, 1323, 1335 |
| MboI | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| MboII | GAAGA | 7 cut(s) | 59, 116, 210, 567, 629, 773, 1376 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MflI | RGATCY | 2 cut(s) | 373, 1118 |
| MhlI | GDGCHC | 1 cut(s) | 774 |
| MlyI | GAGTC | 1 cut(s) | 482 |
| Mph1103I | ATGCAT | 1 cut(s) | 967 |
| MroXI | GAANNNNTTC | 1 cut(s) | 621 |
| MspA1I | CMGCKG | 2 cut(s) | 1397, 1457 |
| MspR9I | CCNGG | 4 cut(s) | 368, 470, 943, 1077 |
| MunI | CAATTG | 1 cut(s) | 204 |
| Mva1269I | GAATGC | 1 cut(s) | 943 |
| MvaI | CCWGG | 4 cut(s) | 368, 470, 943, 1077 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 639, 1187, 1400, 1470 |
| NcoI | CCATGG | 1 cut(s) | 598 |
| NdeI | CATATG | 1 cut(s) | 278 |
| NdeII | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| NlaIII | CATG | 7 cut(s) | 602, 682, 814, 899, 1160, 1215, 1439 |
| NlaIV | GGNNCC | 3 cut(s) | 354, 728, 1120 |
| NmuCI | GTSAC | 1 cut(s) | 828 |
| NsiI | ATGCAT | 1 cut(s) | 967 |
| NspI | RCATGY | 1 cut(s) | 1439 |
| PaeI | GCATGC | 1 cut(s) | 1439 |
| PagI | TCATGA | 2 cut(s) | 895, 1156 |
| PctI | GAATGC | 1 cut(s) | 943 |
| PdmI | GAANNNNTTC | 1 cut(s) | 621 |
| PfeI | GAWTC | 2 cut(s) | 121, 1328 |
| PflFI | GACNNNGTC | 1 cut(s) | 826 |
| PkrI | GCNGC | 2 cut(s) | 809, 1396 |
| PleI | GAGTC | 1 cut(s) | 481 |
| PpsI | GAGTC | 1 cut(s) | 481 |
| Ppu21I | YACGTR | 1 cut(s) | 584 |
| Psp124BI | GAGCTC | 1 cut(s) | 774 |
| Psp6I | CCWGG | 4 cut(s) | 366, 468, 941, 1075 |
| PspGI | CCWGG | 4 cut(s) | 366, 468, 941, 1075 |
| PspN4I | GGNNCC | 3 cut(s) | 354, 728, 1120 |
| PstI | CTGCAG | 1 cut(s) | 43 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1064 |
| PsuI | RGATCY | 2 cut(s) | 373, 1118 |
| PsyI | GACNNNGTC | 1 cut(s) | 826 |
| RsaI | GTAC | 2 cut(s) | 1291, 1422 |
| RsaNI | GTAC | 2 cut(s) | 1290, 1421 |
| SacI | GAGCTC | 1 cut(s) | 774 |
| SatI | GCNGC | 2 cut(s) | 808, 1395 |
| Sau3AI | GATC | 6 cut(s) | 59, 373, 889, 1118, 1321, 1333 |
| SchI | GAGTC | 1 cut(s) | 482 |
| ScrFI | CCNGG | 4 cut(s) | 368, 470, 943, 1077 |
| SduI | GDGCHC | 1 cut(s) | 774 |
| SfaNI | GCATC | 5 cut(s) | 308, 498, 787, 952, 1150 |
| SfcI | CTRYAG | 2 cut(s) | 39, 1468 |
| SmlI | CTYRAG | 2 cut(s) | 296, 1016 |
| SmoI | CTYRAG | 2 cut(s) | 296, 1016 |
| SphI | GCATGC | 1 cut(s) | 1439 |
| SsiI | CCGC | 5 cut(s) | 699, 879, 1395, 1443, 1455 |
| SspI | AATATT | 1 cut(s) | 761 |
| SspMI | CTAG | 6 cut(s) | 57, 74, 324, 428, 590, 608 |
| SstI | GAGCTC | 1 cut(s) | 774 |
| StyD4I | CCNGG | 4 cut(s) | 366, 468, 941, 1075 |
| StyI | CCWWGG | 1 cut(s) | 598 |
| TaaI | ACNGT | 5 cut(s) | 212, 826, 1252, 1280, 1469 |
| TaiI | ACGT | 1 cut(s) | 586 |
| TaqI | TCGA | 2 cut(s) | 578, 836 |
| TatI | WGTACW | 1 cut(s) | 1420 |
| TauI | GCSGC | 1 cut(s) | 1397 |
| TfiI | GAWTC | 2 cut(s) | 121, 1328 |
| TscAI | CASTG | 1 cut(s) | 831 |
| TseFI | GTSAC | 1 cut(s) | 828 |
| TseI | GCWGC | 1 cut(s) | 807 |
| Tsp45I | GTSAC | 1 cut(s) | 828 |
| TspDTI | ATGAA | 3 cut(s) | 827, 879, 1098 |
| TspGWI | ACGGA | 1 cut(s) | 220 |
| TspRI | CASTG | 1 cut(s) | 831 |
| Tth111I | GACNNNGTC | 1 cut(s) | 826 |
| XapI | RAATTY | 6 cut(s) | 25, 242, 925, 1022, 1034, 1165 |
| XbaI | TCTAGA | 2 cut(s) | 73, 589 |
| XceI | RCATGY | 1 cut(s) | 1439 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 135 |
| XmnI | GAANNNNTTC | 1 cut(s) | 621 |
| XspI | CTAG | 6 cut(s) | 57, 74, 324, 428, 590, 608 |
| Zsp2I | ATGCAT | 1 cut(s) | 967 |