Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GBBH-like_N | PF06155 | 29 - 106 | 2.4e-19 | Gamma-butyrobetaine hydroxylase-like, N-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 20, 58 |
| AccII | CGCG | 1 cut(s) | 80 |
| AciI | CCGC | 6 cut(s) | 20, 28, 42, 53, 56, 211 |
| AclWI | GGATC | 2 cut(s) | 233, 386 |
| AcyI | GRCGYC | 2 cut(s) | 168, 214 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 19, 177 |
| AflII | CTTAAG | 1 cut(s) | 142 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 2 cut(s) | 134, 161 |
| AluI | AGCT | 2 cut(s) | 134, 161 |
| AlwI | GGATC | 2 cut(s) | 233, 386 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 242 |
| AspLEI | GCGC | 1 cut(s) | 82 |
| AspS9I | GGNCC | 2 cut(s) | 22, 180 |
| AsuHPI | GGTGA | 4 cut(s) | 52, 203, 211, 271 |
| AvaII | GGWCC | 2 cut(s) | 22, 180 |
| BfmI | CTRYAG | 2 cut(s) | 234, 243 |
| BfrI | CTTAAG | 1 cut(s) | 142 |
| BisI | GCNGC | 2 cut(s) | 56, 212 |
| BlsI | GCNGC | 2 cut(s) | 57, 213 |
| Bme18I | GGWCC | 2 cut(s) | 22, 180 |
| BmgT120I | GGNCC | 2 cut(s) | 22, 180 |
| BmiI | GGNNCC | 1 cut(s) | 32 |
| BmsI | GCATC | 2 cut(s) | 37, 303 |
| BsaHI | GRCGYC | 2 cut(s) | 168, 214 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 19, 177 |
| Bse118I | RCCGGY | 1 cut(s) | 188 |
| Bse1I | ACTGG | 1 cut(s) | 295 |
| Bse3DI | GCAATG | 2 cut(s) | 115, 183 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 19, 177 |
| BseMI | GCAATG | 2 cut(s) | 115, 183 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseNI | ACTGG | 1 cut(s) | 295 |
| Bsh1236I | CGCG | 1 cut(s) | 80 |
| BsiSI | CCGG | 3 cut(s) | 25, 189, 385 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 19, 177 |
| Bsp143I | GATC | 2 cut(s) | 225, 391 |
| BspACI | CCGC | 6 cut(s) | 20, 28, 42, 53, 56, 211 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BspFNI | CGCG | 1 cut(s) | 80 |
| BspHI | TCATGA | 1 cut(s) | 345 |
| BspLI | GGNNCC | 1 cut(s) | 32 |
| BspMAI | CTGCAG | 1 cut(s) | 238 |
| BspPI | GGATC | 2 cut(s) | 233, 386 |
| BspTI | CTTAAG | 1 cut(s) | 142 |
| BsrBI | CCGCTC | 2 cut(s) | 20, 58 |
| BsrDI | GCAATG | 2 cut(s) | 115, 183 |
| BsrFI | RCCGGY | 1 cut(s) | 188 |
| BsrI | ACTGG | 1 cut(s) | 295 |
| BssAI | RCCGGY | 1 cut(s) | 188 |
| BssMI | GATC | 2 cut(s) | 225, 391 |
| BssNI | GRCGYC | 2 cut(s) | 168, 214 |
| Bst4CI | ACNGT | 1 cut(s) | 155 |
| BstACI | GRCGYC | 2 cut(s) | 168, 214 |
| BstAFI | CTTAAG | 1 cut(s) | 142 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 135 |
| BstFNI | CGCG | 1 cut(s) | 80 |
| BstHHI | GCGC | 1 cut(s) | 82 |
| BstKTI | GATC | 2 cut(s) | 228, 394 |
| BstMBI | GATC | 2 cut(s) | 225, 391 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 77, 167 |
| BstSFI | CTRYAG | 2 cut(s) | 234, 243 |
| BstUI | CGCG | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 391 |
| BstYI | RGATCY | 1 cut(s) | 391 |
| BtsI | GCAGTG | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 1 cut(s) | 121 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CaiI | CAGNNNCTG | 1 cut(s) | 242 |
| CciI | TCATGA | 1 cut(s) | 345 |
| CfoI | GCGC | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 2 cut(s) | 22, 180 |
| CpoI | CGGWCCG | 1 cut(s) | 22 |
| CseI | GACGC | 2 cut(s) | 176, 203 |
| CspI | CGGWCCG | 1 cut(s) | 22 |
| CviAII | CATG | 2 cut(s) | 229, 346 |
| CviJI | RGCY | 3 cut(s) | 134, 161, 342 |
| CviKI_1 | RGCY | 3 cut(s) | 134, 161, 342 |
| DdeI | CTNAG | 1 cut(s) | 135 |
| DpnI | GATC | 2 cut(s) | 227, 393 |
| DpnII | GATC | 2 cut(s) | 225, 391 |
| EciI | GGCGGA | 1 cut(s) | 42 |
| Eco32I | GATATC | 1 cut(s) | 204 |
| Eco47I | GGWCC | 2 cut(s) | 22, 180 |
| EcoRV | GATATC | 1 cut(s) | 204 |
| FaeI | CATG | 2 cut(s) | 232, 349 |
| FaiI | YATR | 7 cut(s) | 90, 230, 255, 285, 347, 357, 378 |
| FatI | CATG | 2 cut(s) | 228, 345 |
| Fnu4HI | GCNGC | 2 cut(s) | 56, 212 |
| Fsp4HI | GCNGC | 2 cut(s) | 56, 212 |
| GlaI | GCGC | 1 cut(s) | 81 |
| GluI | GCNGC | 2 cut(s) | 56, 212 |
| HapII | CCGG | 3 cut(s) | 25, 189, 385 |
| HgaI | GACGC | 2 cut(s) | 176, 203 |
| HhaI | GCGC | 1 cut(s) | 82 |
| Hin1I | GRCGYC | 2 cut(s) | 168, 214 |
| Hin1II | CATG | 2 cut(s) | 232, 349 |
| Hin6I | GCGC | 1 cut(s) | 80 |
| HinP1I | GCGC | 1 cut(s) | 80 |
| HincII | GTYRAC | 1 cut(s) | 166 |
| HindII | GTYRAC | 1 cut(s) | 166 |
| HinfI | GANTC | 4 cut(s) | 66, 265, 364, 381 |
| HpaII | CCGG | 3 cut(s) | 25, 189, 385 |
| HphI | GGTGA | 4 cut(s) | 52, 203, 211, 271 |
| Hpy166II | GTNNAC | 2 cut(s) | 151, 166 |
| Hpy188I | TCNGA | 1 cut(s) | 396 |
| Hpy188III | TCNNGA | 2 cut(s) | 346, 361 |
| Hpy8I | GTNNAC | 2 cut(s) | 151, 166 |
| HpyAV | CCTTC | 1 cut(s) | 396 |
| HpyCH4III | ACNGT | 1 cut(s) | 155 |
| HpyCH4V | TGCA | 2 cut(s) | 236, 283 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 77, 167 |
| HpyF3I | CTNAG | 1 cut(s) | 135 |
| Hsp92I | GRCGYC | 2 cut(s) | 168, 214 |
| Hsp92II | CATG | 2 cut(s) | 232, 349 |
| HspAI | GCGC | 1 cut(s) | 80 |
| Kzo9I | GATC | 2 cut(s) | 225, 391 |
| LmnI | GCTCC | 1 cut(s) | 55 |
| LpnPI | CCDG | 8 cut(s) | 38, 76, 171, 202, 203, 255, 276, 398 |
| LweI | GCATC | 2 cut(s) | 37, 303 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 2 cut(s) | 227, 393 |
| MbiI | CCGCTC | 2 cut(s) | 20, 58 |
| MboI | GATC | 2 cut(s) | 225, 391 |
| MflI | RGATCY | 1 cut(s) | 391 |
| MlyI | GAGTC | 2 cut(s) | 358, 375 |
| MnlI | CCTC | 5 cut(s) | 20, 83, 88, 255, 353 |
| MseI | TTAA | 1 cut(s) | 143 |
| MspA1I | CMGCKG | 2 cut(s) | 134, 161 |
| MspCI | CTTAAG | 1 cut(s) | 142 |
| MspI | CCGG | 3 cut(s) | 25, 189, 385 |
| MvnI | CGCG | 1 cut(s) | 80 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 77, 167 |
| NdeII | GATC | 2 cut(s) | 225, 391 |
| NlaIII | CATG | 2 cut(s) | 232, 349 |
| NlaIV | GGNNCC | 1 cut(s) | 32 |
| PagI | TCATGA | 1 cut(s) | 345 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PfeI | GAWTC | 2 cut(s) | 66, 265 |
| PkrI | GCNGC | 2 cut(s) | 57, 213 |
| PleI | GAGTC | 2 cut(s) | 358, 375 |
| PpsI | GAGTC | 2 cut(s) | 358, 375 |
| PspN4I | GGNNCC | 1 cut(s) | 32 |
| PspPI | GGNCC | 2 cut(s) | 22, 180 |
| PstI | CTGCAG | 1 cut(s) | 238 |
| PstNI | CAGNNNCTG | 1 cut(s) | 242 |
| PsuI | RGATCY | 1 cut(s) | 391 |
| PvuII | CAGCTG | 2 cut(s) | 134, 161 |
| Rsr2I | CGGWCCG | 1 cut(s) | 22 |
| RsrII | CGGWCCG | 1 cut(s) | 22 |
| SaqAI | TTAA | 1 cut(s) | 143 |
| SatI | GCNGC | 2 cut(s) | 56, 212 |
| Sau3AI | GATC | 2 cut(s) | 225, 391 |
| Sau96I | GGNCC | 2 cut(s) | 22, 180 |
| SchI | GAGTC | 2 cut(s) | 358, 375 |
| SetI | ASST | 6 cut(s) | 99, 136, 163, 182, 201, 244 |
| SfaNI | GCATC | 2 cut(s) | 37, 303 |
| SfcI | CTRYAG | 2 cut(s) | 234, 243 |
| SinI | GGWCC | 2 cut(s) | 22, 180 |
| SmlI | CTYRAG | 1 cut(s) | 142 |
| SmoI | CTYRAG | 1 cut(s) | 142 |
| SsiI | CCGC | 6 cut(s) | 20, 28, 42, 53, 56, 211 |
| TaaI | ACNGT | 1 cut(s) | 155 |
| TaqI | TCGA | 1 cut(s) | 273 |
| TauI | GCSGC | 2 cut(s) | 58, 214 |
| TfiI | GAWTC | 2 cut(s) | 66, 265 |
| Tru1I | TTAA | 1 cut(s) | 143 |
| Tru9I | TTAA | 1 cut(s) | 143 |
| TscAI | CASTG | 1 cut(s) | 121 |
| TspRI | CASTG | 1 cut(s) | 121 |
| Vha464I | CTTAAG | 1 cut(s) | 142 |
| VpaK11BI | GGWCC | 2 cut(s) | 22, 180 |