MD05G1151200.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
28196344 .. 28205714
9371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1151200.v1.1.491

Sequence Viewer

Length: 6048 bp
ATGGAGTTGATTGCCTTCATTCAAGTTTTCAACATCATCGTCATCGCCATCGGGACTCTATTGTACATATGCTGCAGATCATTTTCTTCTTCGTCTCCTGCGGCTGATTCTGATGTAGCTGATTCTACTGATGTGCCGGATGTTGATGTTGTGGATATCGCTTCTTCTTCTTCATCCACTGCTGCTCCTGCTGATGCTGATGATACAAAAAAGTACGATGTGTTTATTAGTTTCAGAGGTGAGGACACCCGCCGTACTTTCACCAGCCACCTCCACGCTGCCTTACTTGAGAACAAAATCACAACTTATATTGATGACGAGCTTAAGAGAGGAGATGAAATCGCACCTGCCCTTCTGAAAGCAATTAAGGAATCAGAGCTTTCGGTGATCGTTCTCTCGAAAGACTATGCTTCCTCGACCTGGTGTTTGGATGAGCTTGTGCATATCCTAGAATGCAAGGAAAAACATGGCCGGTTGGTTATACCCATTTTTTACGACACCCTTCCATCGGATGTACGAAAACAACAGGGGAGTTATGAGGTTGCATTTGCTGAACTTGAACAGCGTTTCAAGAACAGTATCAACAAGGTGCGCAAGTGGAGGGATGCTTTGACGAATGCAGCAAATCTATCTGGGTTTGATTCAAAAAAATATGGGACGGATGCTGTTTTAGTTAAGAAAGTTGTTGAATATATTTGGACCAAATTGTGTCGCGCATCATCCTGCGATTTAAAGGGCTTGTTTGGAATTGAAAGCCGCATCGAGCAGGTCGAATCACTATTAGGCATTCATTCATCGGATGCTTGCATCACTGTCGGTATTTGGGGCATGGGTGGTATTGGCAAGACCACCCTTGCCGAAACTGTATTTCACAGGCTCTCTTCTAAATTCGAAGCTTCTTGTTTTGTTAAGAATGTCAGGGAGAACTCAGAAAAAGCAGATGGACTAGATCACTTGGAAAAAACACTTCTTAAGGAGATATTAAAGGAAGAAGGTCTATCCATAGGATCAATTAGTGTTCGAGAAAGGCTCAGCCGCACAAAGGTTCTCATTGTTCTTGATGATGTGAGTAGTTCAATGCAAATGGAACGTTTAGCTGGCAGTGGTCTCCGGTTTGGCACTGGAAGTAGAATCATTATCACAACTAGAGATAGGGGCACATTTGGGAAAACTGTTGAAGAGGATAATATCTACGAGATTGAGGGATTACAACCGGATGATGATCTTCAGCTCTTTTGTTCGCGTGCTTTCAAGGATAACAGTACTTGTAGAATAGATTATAAGGAGTTGGTAGAAAAGGCGGTGGCTTATGCCAAAGGCGTTCCTTTAGCTCTTACAGTCCTGGGGTCCTTGTTCTTCAATTGCAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACGATTTCCCAGCAAAGATATCCAGAAGGTGTTGAGAATAAGTTATGATGGATTGGGAGACAATGAGAAGGATATTTTTCTGGATATAGCATGTTTTCATAAAGGGAAGTCTGTGGTTGAGGTAAAACGAATGTTAGATGTTCGTGAATTCTTTGCGACATCTGGAATTAGAATTCTCATTGAGATGTCTCTCATATCAATTGTTTCACAATGGGGAAAGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAGGAAAATTGTTCAACAACAAGATATTAAAGATCCCGGTAAACGGAGTAGGTTGTTCAATGTTGAGGATGTCAATCGTGTATTGAGGAGTAACAAGGAAATTCCAATTGTTGAAGCCATACAGGTTAATTGGTGTGATCTTCAAGAGCGACCATTAGAACGTGCAGACTTCAAAAAGATGTCTAACCTAATAATGCTAATTGTGGATTCTGGAAAATTTTACCACAAACTCACCACTTCTCTAGACCTTCCCGATTCTCTTCGTTATCTTAAGTGGCGGGGATATCCACTGGAATCTTTGCCGTCAAATTTTTGTTCAAAAAATCTAGTTGAGCTTCATATGCAAGCTAGTGAAGTTAAGAAGCTTTGGAAAGAAGAGCAGATACTTCTCAACTTACAAGTGATAAATCTCCAGGGCTGTGAAAGTTTGGTTGAAATTCCTTCGTATTTTCAACATCTCGACAAGCTTACTCATCTTGATCTTGAATGTTGCCGGAGTCTCAAGTATCTTCCAAAGATGCCAGGAAATATTCAATACTTAAATTTAGATCGCAGTGGTATAAAGGAGTTGCCTGAATCAGTTTGGTCTAACAAAAATATTTCTTGCTTGAATTTAAATCAATGCGTCTTTATGAAATTTCCAAGCAACTGCTGTAAGTTTAAAAATATCGAGATACTCAATCTCAGTGGTTGCTCTAAATTTGAAAACTTTCCAGAGATTTTGGAGCTGGAACATTTGAAATCCTTAAGTTTAAGCCAAACAGTAGTTACAGAGCTACCCTTATCAATCTGTGAGTTGAAATATCTTGAGAGACTTGATCTCTACGGGTGCTCTATATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGAAGTCCTTAATTTTAAGCCAAACAGCAGTTACAGAGCTACCCTCATCAATCTGTGAGTTGAAATATCTTAAGAGACTTGATCTCTACGGGTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGAAGTCCTTAAGTTTAGGCCAAACAGCAGTTACAGAGCTACCCTCATCAATCTGTGAGTTGAAATATCTTGAGAGTCTTGATCTCCACGGGTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGAAGTCCTTAAGTTTAGGCCAAACAGCAGTTACAGAGCTACCCTCATCAATCTGTGAGTTGAAATATCTGAAGTCCTTAAGTTTAAGCGAAACAGCAGTTACAGAGCTACCCTCATCAATCTGTGAGTTGAAATATCTTGAGAGTCTTGGTCTCTGCGGGTGCTCTAGATTTGGATTTTCCAAATTCCCTGAAATCTTGAAGTCAATGGAACATTTGAAGTCCTTAAGTTTAAGCCACACAGCAGTTACAGAGTTACCCTCATCAATTTGTGAGTTGAAATATCTTGTGAGCCTTCGTCTCAGCAATTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGGTGTCTCTTTGTTTGGAATACACAGCTGTCGAAATGCTTCCTTCGTCTATTGGGAATCTAAATGGGCTTCAAGATTTAAACCTTAGATGCTGCTATCTACTTAAGGATGTCCCAACAAGTATCTACAGTTTAACCAATCTTAAATGTCTCGACTTTCATCGGTGTTTGAGACTTGAAAAATTGCCTTCCAGCTCTGTCGGTTTTCTCTCTTTAAAAGAACTAGAACTCAGCTTCAGCGGTATATTGGAAATACCAGCAAGCATCAAACAAGCTTCTCGGTTGTCTATACTCGACTTAAACTACTGCAAGCGGCTTCAATCTATACCAGAGCTCCCAGTGCTATGCAATGTTAAAGCTTCAAACTGCAAGTCGCTGAAGAAAGTGTCAAGTTCAAGGACAGCACTCACACAAGGTTGGGATAAACCTCATTATTGTTTCAGATTGTTTCTTCATTGCCCAAGATTGAATAATAATTCAAGGAGCAACATAATGGATGAAGCACAGATTACAGTTATGCGAATGGCAACTGTTGCGCCATTAAAGGACCATCGCTGGCTTCCTAATCCCTGGCCTCAGATTACCATTGCATGTCCAGGAAAAGAAACTCCAAATTGGTTCAGCTATCAAAATGAGGGATCTTCAATAGACATCGAGCTTTGTCCAGATTGGTTTCGAACAGGTTTATTTGGTTTCGCTCTCTCTGTTGTTCTTTCTGGGGTTTCAGAGGTGCGGTGGTATGACTTTAGGATGGTAAGAGCTAATTTCATTGTCAAATTCATGGGTGAAAGCCATGAACTGTTCAGTTCTGAGTACATTATCCCAGAGGACTGCAACGACGACTGCTGTGACGGCCAACATCACGTGCTTGTGTGGAGTGAGGCCTTTAGAAGTGAAGAGGTAGGAAAACACTGCTCCCCTGATGTTTACAAACTTGCCAGAGAGGCCTCTGTTGTCTTCTGCCCGGTGGATTCTGCTTCCCCTAAGAAGGTGGAAAGCTGTGGTATATGCCCATTGTATGCGGAAGATGCTGAGAAATTCAAATTTGGTCATGTGTTCATGTCGAGGGGACCAAAAGTAGGAGAAGAAACAAGACAAGATGATCATTCCAAAGGTGGTGGATCAGGAGATGAGCCTCAAGTTAGTGGATTTTCCATATTCCCTGAAATCTTGATGCCAATGGAACATTTGGTGTCTCTTTGTTTGGAATACACAGCTGTCGAAATGCTTCCTTCGTCTATTGGGAATCTAAATGGGCTTCAAGATTTAAACCTTAGACGCTGCTATCTACTTAAGGATGTCCCAACAAGTATCTACAGTTTAACCAATCTTAAACGTCTCAACTTTAATGAGTGTGGGAGACTTGAAAAATTGCCTTCCAGCTCTGTTGGTTTTATCTCTTTAGAAGAACTAGATCTCAGCAAGAGCGGTATATTGGAAATACCAGCAAGCATCAAACAAGCTTCTCGGTTGTCTATACTCAACTTAAAGGGCTGCAAGCGGCTTCAATCTATACCAGAGCTCCCAGTGCTATGCAATGTTAAAGCTTCAAACTGCAAGTCGCTGAAGATAGTGTCAAGTTCAAGGACAGCACTCGCACAAGGTTGGGATAAACCTAAAAATTGTTTCAAAGTTTTTAGTAATTGCCCAAAATTGGATAATAATTCAAGGAGCAACATAATGGATGAAGCACAGATTACAATTATGCGAATGGCAACTGTTGCGCCATTTAAGTACATTAGCTGGTTTCGTGAACCCTGGATTCATAATCCCTGGCCTCAGATTAACACTGTATGTCCAGGAAAAGAAATTCCAAATTGGTTCAGCTATCAAAATGAGGGATCTTCAGTAGACATCGAGCTTTGTCCAGATTGGTTTCGAACAGGTTTATTTGGTTTCGCTCTCTCTCTTGTTCTTTCTGGGGTATCAGGGCGGCGGCATGACTGGAGGGTAAGAGCTAATTTCATTGTCAAATTCATGGGTGAAAGCCATGAACTGTTCAGTTTTAAGTACATTATCCCAGGCATAAGCTACGACCACAGTGTTGACCAACATCACGTGCACGTGTGGAATGAGGGCTTTAGAAGTGAAGCGGTAGGAAAAAACTGCTCCCCTGATGTTTACAAACTTGCCAAAGAGGCCTCTGTTGTCTTCTTCTGCCCTGTGGGTTTTGAAGATTCTGAAGATTCTGAAGATTCTGAAGCCGGCAATACTTTTGTTTTACGTATAACGGTGGAAAGGTGTGGTATATGCCCATTGTATGCGGAAGATGCTGAGAAATTCAATTTTGGTCATGAGTTCATGTCGAGGGGACCAAAAGTAGGAGAAGAAACAAGACAAGATGATTTTGAGTCCAATGGAACAATTGGTTTATATGGGCAGCATACAGCCAAGAAGCCAAAGATATTAAAGCAATCTCTAGATACTACTTCTGGAGGTCCATGGTCCCATTCTGAAGATCAGGCACTTGTTGTTCTTGTACATGATATGGGCCCAAATTGGGAACTCATAAGTGATGCAATCAACAGCACACTGCACTTGAAGTGTATTTTTCGCAAGCCTAAAGAGTGCAAGGAGCGTCACAAAATATTAATGGATATGAATTCTGGTGATGGGGCTGATAGTGCTGAAGATTCGGGATCTTCTCAGCCTTATCCTTCTCCATTACCGGGCATTCCGAAGGGCAGTGCCAGGCAATCATTTCAACGCTTGCAAGAGCCCACGGAAGAGGATGTTCTCAAGTCACGTTTTGAGAAACTAATTAAGATTGTTCAGAAGCATCATTATCGGAGGAGTCAGGTTAGTGAAAATGAGCATAGAGTTGCTGAGCACACAGTGCAGATCTTGCAGTGGCCCAATTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2016

Amino Acids

227.67

Weight (kDa)

6.16

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 71 - 245 3.6e-53 TIR domain
TIR_2 PF13676 74 - 169 5.7e-16 TIR domain
NB-ARC PF00931 254 - 420 8.1e-19 NB-ARC domain
WHD_ROQ1 PF23282 490 - 562 2.2e-14 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 771 - 881 7.8e-13 Leucine-rich repeat region
LRR_13 PF23286 916 - 999 1.9e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 939 - 996 1.4e-10 Leucine-rich repeat region
LRR_14 PF23598 998 - 1064 8.9e-07 Leucine-rich repeat region
LRR_13 PF23286 1037 - 1119 5.7e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 1058 - 1212 2.3e-11 Leucine-rich repeat region
C-JID PF20160 1258 - 1404 7.8e-11 C-JID domain
LRR_14 PF23598 1455 - 1602 7.6e-12 Leucine-rich repeat region
C-JID PF20160 1659 - 1818 1.1e-11 C-JID domain
Myb_DNA-binding PF00249 1873 - 1920 2.8e-06 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 1875 - 1923 4.1e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1281
AarI CACCTGC 1 cut(s) 355
Acc16I TGCGCA 1 cut(s) 593
Acc36I ACCTGC 2 cut(s) 355, 757
AccBSI CCGCTC 1 cut(s) 4608
AccI GTMKAC 1 cut(s) 5031
AccII CGCG 2 cut(s) 714, 1243
AclI AACGTT 1 cut(s) 1090
AclWI GGATC 6 cut(s) 1015, 1691, 3826, 4309, 5029, 5827
AcoI YGGCCR 2 cut(s) 469, 4033
AcvI CACGTG 3 cut(s) 4045, 5239, 5245
AdeI CACNNNGTG 1 cut(s) 6016
AfaI GTAC 9 cut(s) 65, 215, 256, 516, 1264, 3995, 4916, 5192, 5661
AflIII ACRYGT 1 cut(s) 5244
Alw21I GWGCWC 8 cut(s) 2498, 2639, 2780, 2990, 3516, 4704, 5244, 6012
Alw44I GTGCAC 1 cut(s) 5240
AlwI GGATC 6 cut(s) 1015, 1691, 3826, 4309, 5029, 5827
ApaI GGGCCC 1 cut(s) 5675
ApaLI GTGCAC 1 cut(s) 5240
ApeKI GCWGC 8 cut(s) 72, 182, 278, 620, 3273, 4461, 4674, 5560
ArsI GACNNNNNNTTYG 6 cut(s) 409, 441, 3536, 3568, 4724, 4756
AseI ATTAAT 1 cut(s) 5771
Asp700I GAANNNNTTC 3 cut(s) 2373, 3219, 4407
AspLEI GCGC 4 cut(s) 594, 716, 3718, 4906
AsuC2I CCSGG 3 cut(s) 1701, 4145, 5850
AsuHPI GGTGA 7 cut(s) 251, 253, 397, 1888, 3977, 5174, 5801
AsuII TTCGAA 3 cut(s) 891, 3856, 5059
AvaII GGWCC 7 cut(s) 699, 1347, 3727, 4250, 5492, 5618, 5625
BaeGI GKGCMC 3 cut(s) 1160, 5244, 5675
BanII GRGCYC 4 cut(s) 3516, 4704, 5675, 5901
BarI GAAGNNNNNNTAC 2 cut(s) 2031, 2063
BbrPI CACGTG 3 cut(s) 4045, 5239, 5245
BbsI GAAGAC 2 cut(s) 4129, 5323
Bbv12I GWGCWC 8 cut(s) 2498, 2639, 2780, 2990, 3516, 4704, 5244, 6012
BbvI GCAGC 8 cut(s) 59, 169, 265, 632, 3260, 4448, 4661, 5572
BccI CCATC 7 cut(s) 56, 514, 935, 1448, 3738, 3925, 5786
BceAI ACGGC 3 cut(s) 237, 1951, 4048
BcgI CGANNNNNNTGC 4 cut(s) 796, 830, 5948, 5982
BclI TGATCA 1 cut(s) 4282
BcnI CCSGG 3 cut(s) 1701, 4145, 5850
BfmI CTRYAG 3 cut(s) 73, 3307, 4495
BfuAI ACCTGC 2 cut(s) 355, 757
BglI GCCNNNNNGGC 2 cut(s) 4124, 5318
BglII AGATCT 2 cut(s) 4594, 6021
BlpI GCTNAGC 2 cut(s) 1031, 6006
BmcAI AGTACT 1 cut(s) 1264
Bme18I GGWCC 7 cut(s) 699, 1347, 3727, 4250, 5492, 5618, 5625
BmiI GGNNCC 5 cut(s) 1348, 4251, 5493, 5627, 5673
BmrI ACTGGG 2 cut(s) 3512, 4700
BmuI ACTGGG 2 cut(s) 3512, 4700
BpiI GAAGAC 2 cut(s) 4129, 5323
BpmI CTGGAG 3 cut(s) 2060, 5146, 5634
Bpu1102I GCTNAGC 2 cut(s) 1031, 6006
Bpu14I TTCGAA 3 cut(s) 891, 3856, 5059
BpuEI CTTGAG 7 cut(s) 308, 2150, 2492, 2774, 2984, 4302, 5903
BpuMI CCSGG 3 cut(s) 1701, 4145, 5850
BsaAI YACGTR 4 cut(s) 4045, 5239, 5245, 5405
BsaBI GATNNNNATC 2 cut(s) 1221, 1737
BsaI GGTCTC 2 cut(s) 1112, 2981
BsaJI CCNNGG 9 cut(s) 1342, 2077, 2770, 3749, 4937, 4952, 5200, 5621, 5901
BsaWI WCCGGW 2 cut(s) 1110, 1213
BsaXI ACNNNNNCTCC 6 cut(s) 169, 199, 3498, 3528, 4686, 4716
Bse118I RCCGGY 2 cut(s) 471, 5384
Bse1I ACTGG 5 cut(s) 1126, 1959, 3518, 4706, 5129
Bse3DI GCAATG 4 cut(s) 3535, 3634, 3765, 4723
Bse8I GATNNNNATC 2 cut(s) 1221, 1737
BseDI CCNNGG 9 cut(s) 1342, 2077, 2770, 3749, 4937, 4952, 5200, 5621, 5901
BseJI GATNNNNATC 2 cut(s) 1221, 1737
BseMI GCAATG 4 cut(s) 3535, 3634, 3765, 4723
BseNI ACTGG 5 cut(s) 1126, 1959, 3518, 4706, 5129
BseRI GAGGAG 3 cut(s) 345, 1765, 5986
BseSI GKGCMC 3 cut(s) 1160, 5244, 5675
BseXI GCAGC 8 cut(s) 59, 169, 265, 632, 3260, 4448, 4661, 5572
BseYI CCCAGC 1 cut(s) 1415
BsgI GTGCAG 3 cut(s) 1848, 5699, 6038
Bsh1236I CGCG 2 cut(s) 714, 1243
BsiHKAI GWGCWC 8 cut(s) 2498, 2639, 2780, 2990, 3516, 4704, 5244, 6012
BsiSI CCGG 9 cut(s) 137, 472, 1111, 1214, 1701, 2158, 4145, 5385, 5849
BslFI GGGAC 7 cut(s) 67, 670, 3278, 4263, 4466, 5505, 5611
BsmBI CGTCTC 3 cut(s) 99, 3128, 4523
BsmFI GGGAC 7 cut(s) 67, 670, 3278, 4263, 4466, 5505, 5611
BsmI GAATGC 4 cut(s) 458, 622, 786, 5853
Bso31I GGTCTC 2 cut(s) 1112, 2981
Bsp119I TTCGAA 3 cut(s) 891, 3856, 5059
Bsp120I GGGCCC 1 cut(s) 5671
Bsp1407I TGTACA 2 cut(s) 63, 5659
Bsp1720I GCTNAGC 2 cut(s) 1031, 6006
Bsp19I CCATGG 1 cut(s) 5621
BspFNI CGCG 2 cut(s) 714, 1243
BspHI TCATGA 1 cut(s) 5473
BspLI GGNNCC 5 cut(s) 1348, 4251, 5493, 5627, 5673
BspMAI CTGCAG 1 cut(s) 77
BspMI ACCTGC 2 cut(s) 355, 757
BspPI GGATC 6 cut(s) 1015, 1691, 3826, 4309, 5029, 5827
BspQI GCTCTTC 1 cut(s) 2034
BspT104I TTCGAA 3 cut(s) 891, 3856, 5059
BspTNI GGTCTC 2 cut(s) 1112, 2981
BsrBI CCGCTC 1 cut(s) 4608
BsrDI GCAATG 4 cut(s) 3535, 3634, 3765, 4723
BsrFI RCCGGY 2 cut(s) 471, 5384
BsrGI TGTACA 2 cut(s) 63, 5659
BsrI ACTGG 5 cut(s) 1126, 1959, 3518, 4706, 5129
BssAI RCCGGY 2 cut(s) 471, 5384
BssECI CCNNGG 9 cut(s) 1342, 2077, 2770, 3749, 4937, 4952, 5200, 5621, 5901
BssT1I CCWWGG 1 cut(s) 5621
Bst6I CTCTTC 6 cut(s) 886, 1173, 1929, 2034, 4071, 5901
BstAPI GCANNNNNTGC 5 cut(s) 1648, 3713, 4901, 6016, 6025
BstAUI TGTACA 2 cut(s) 63, 5659
BstBAI YACGTR 4 cut(s) 4045, 5239, 5245, 5405
BstBI TTCGAA 3 cut(s) 891, 3856, 5059
BstDSI CCRYGG 3 cut(s) 2770, 5621, 5901
BstFNI CGCG 2 cut(s) 714, 1243
BstHHI GCGC 4 cut(s) 594, 716, 3718, 4906
BstNSI RCATGY 2 cut(s) 1500, 3774
BstSFI CTRYAG 3 cut(s) 73, 3307, 4495
BstSLI GKGCMC 3 cut(s) 1160, 5244, 5675
BstSNI TACGTA 1 cut(s) 5405
BstUI CGCG 2 cut(s) 714, 1243
BstV1I GCAGC 8 cut(s) 59, 169, 265, 632, 3260, 4448, 4661, 5572
BstV2I GAAGAC 2 cut(s) 4129, 5323
BstX2I RGATCY 6 cut(s) 1696, 3818, 4594, 5021, 5819, 6021
BstYI RGATCY 6 cut(s) 1696, 3818, 4594, 5021, 5819, 6021
BtgI CCRYGG 3 cut(s) 2770, 5621, 5901
BtgZI GCGATG 2 cut(s) 28, 3716
BtsI GCAGTG 7 cut(s) 177, 1108, 2224, 4090, 5711, 5872, 6035
BveI ACCTGC 2 cut(s) 355, 757
CciI TCATGA 1 cut(s) 5473
CfoI GCGC 4 cut(s) 594, 716, 3718, 4906
Cfr10I RCCGGY 2 cut(s) 471, 5384
CseI GACGC 3 cut(s) 2278, 4467, 5747
CsiI ACCWGGT 1 cut(s) 419
Csp6I GTAC 9 cut(s) 64, 214, 255, 515, 1263, 3994, 4915, 5191, 5660
CspCI CAANNNNNGTGG 4 cut(s) 2332, 2367, 4279, 4314
CviQI GTAC 9 cut(s) 64, 214, 255, 515, 1263, 3994, 4915, 5191, 5660
DraI TTTAAA 6 cut(s) 732, 2280, 2326, 3261, 3396, 4449
DraIII CACNNNGTG 1 cut(s) 6016
EaeI YGGCCR 2 cut(s) 469, 4033
Eam1104I CTCTTC 6 cut(s) 886, 1173, 1929, 2034, 4071, 5901
EarI CTCTTC 6 cut(s) 886, 1173, 1929, 2034, 4071, 5901
Ecl136II GAGCTC 2 cut(s) 3514, 4702
Eco105I TACGTA 1 cut(s) 5405
Eco130I CCWWGG 1 cut(s) 5621
Eco147I AGGCCT 3 cut(s) 4064, 4127, 5321
Eco24I GRGCYC 4 cut(s) 3516, 4704, 5675, 5901
Eco31I GGTCTC 2 cut(s) 1112, 2981
Eco32I GATATC 3 cut(s) 157, 1426, 1949
Eco47I GGWCC 7 cut(s) 699, 1347, 3727, 4250, 5492, 5618, 5625
Eco53kI GAGCTC 2 cut(s) 3514, 4702
Eco72I CACGTG 3 cut(s) 4045, 5239, 5245
EcoICRI GAGCTC 2 cut(s) 3514, 4702
EcoO109I RGGNCCY 1 cut(s) 1347
EcoRI GAATTC 4 cut(s) 1391, 1553, 1578, 5782
EcoRV GATATC 3 cut(s) 157, 1426, 1949
EcoT14I CCWWGG 1 cut(s) 5621
EcoT38I GRGCYC 4 cut(s) 3516, 4704, 5675, 5901
ErhI CCWWGG 1 cut(s) 5621
Esp3I CGTCTC 3 cut(s) 99, 3128, 4523
FaqI GGGAC 7 cut(s) 67, 670, 3278, 4263, 4466, 5505, 5611
FauI CCCGC 3 cut(s) 257, 1935, 2975
FauNDI CATATG 2 cut(s) 68, 2004
FbaI TGATCA 1 cut(s) 4282
FblI GTMKAC 1 cut(s) 5031
FriOI GRGCYC 4 cut(s) 3516, 4704, 5675, 5901
FspI TGCGCA 1 cut(s) 593
GlaI GCGC 4 cut(s) 593, 715, 3717, 4905
GsaI CCCAGC 1 cut(s) 1419
GsuI CTGGAG 3 cut(s) 2060, 5146, 5634
HapII CCGG 9 cut(s) 137, 472, 1111, 1214, 1701, 2158, 4145, 5385, 5849
HgaI GACGC 3 cut(s) 2278, 4467, 5747
HhaI GCGC 4 cut(s) 594, 716, 3718, 4906
Hin6I GCGC 4 cut(s) 592, 714, 3716, 4904
HinP1I GCGC 4 cut(s) 592, 714, 3716, 4904
HincII GTYRAC 1 cut(s) 5227
HindII GTYRAC 1 cut(s) 5227
HindIII AAGCTT 7 cut(s) 894, 2027, 2129, 3453, 3537, 4641, 4725
HpaII CCGG 9 cut(s) 137, 472, 1111, 1214, 1701, 2158, 4145, 5385, 5849
HphI GGTGA 7 cut(s) 251, 253, 397, 1888, 3977, 5174, 5801
Hpy166II GTNNAC 7 cut(s) 1706, 4108, 4934, 5032, 5227, 5242, 5302
Hpy8I GTNNAC 7 cut(s) 1706, 4108, 4934, 5032, 5227, 5242, 5302
Hpy99I CGWCG 1 cut(s) 4022
HpyCH4IV ACGT 8 cut(s) 1090, 1825, 4044, 4516, 5238, 5244, 5404, 5926
HpySE526I ACGT 8 cut(s) 1090, 1825, 4044, 4516, 5238, 5244, 5404, 5926
HspAI GCGC 4 cut(s) 592, 714, 3716, 4904
KroI GCCGGC 1 cut(s) 5384
KroNI GCCGGC 1 cut(s) 5386
Ksp22I TGATCA 1 cut(s) 4282
LguI GCTCTTC 1 cut(s) 2034
LmnI GCTCC 9 cut(s) 190, 2389, 3519, 3663, 4100, 4707, 4851, 5294, 5755
Lsp1109I GCAGC 8 cut(s) 59, 169, 265, 632, 3260, 4448, 4661, 5572
MabI ACCWGGT 1 cut(s) 419
MaeII ACGT 8 cut(s) 1090, 1825, 4044, 4516, 5238, 5244, 5404, 5926
MbiI CCGCTC 1 cut(s) 4608
MfeI CAATTG 5 cut(s) 1360, 1605, 1770, 3130, 5544
MflI RGATCY 6 cut(s) 1696, 3818, 4594, 5021, 5819, 6021
MlyI GAGTC 6 cut(s) 49, 2170, 2767, 2977, 5540, 5983
MroNI GCCGGC 1 cut(s) 5384
MroXI GAANNNNTTC 3 cut(s) 2373, 3219, 4407
MslI CAYNNNNRTG 2 cut(s) 1589, 1637
MspA1I CMGCKG 3 cut(s) 3209, 3420, 4397
MspI CCGG 9 cut(s) 137, 472, 1111, 1214, 1701, 2158, 4145, 5385, 5849
MunI CAATTG 5 cut(s) 1360, 1605, 1770, 3130, 5544
Mva1269I GAATGC 4 cut(s) 458, 622, 786, 5853
MvnI CGCG 2 cut(s) 714, 1243
NaeI GCCGGC 1 cut(s) 5386
NciI CCSGG 3 cut(s) 1701, 4145, 5850
NcoI CCATGG 1 cut(s) 5621
NdeI CATATG 2 cut(s) 68, 2004
NgoMIV GCCGGC 1 cut(s) 5384
NlaIV GGNNCC 5 cut(s) 1348, 4251, 5493, 5627, 5673
NmuCI GTSAC 3 cut(s) 4028, 5759, 5922
NsbI TGCGCA 1 cut(s) 593
NspI RCATGY 2 cut(s) 1500, 3774
NspV TTCGAA 3 cut(s) 891, 3856, 5059
PagI TCATGA 1 cut(s) 5473
PaqCI CACCTGC 1 cut(s) 355
PceI AGGCCT 3 cut(s) 4064, 4127, 5321
PciSI GCTCTTC 1 cut(s) 2034
PcsI WCGNNNNNNNCGW 1 cut(s) 768
PctI GAATGC 4 cut(s) 458, 622, 786, 5853
PdiI GCCGGC 1 cut(s) 5386
PdmI GAANNNNTTC 3 cut(s) 2373, 3219, 4407
PfoI TCCNGGA 2 cut(s) 3775, 4978
PleI GAGTC 6 cut(s) 49, 2169, 2766, 2976, 5539, 5982
PmaCI CACGTG 3 cut(s) 4045, 5239, 5245
PmlI CACGTG 3 cut(s) 4045, 5239, 5245
PpsI GAGTC 6 cut(s) 49, 2169, 2766, 2976, 5539, 5982
Ppu21I YACGTR 4 cut(s) 4045, 5239, 5245, 5405
PpuMI RGGWCCY 1 cut(s) 1347
PshBI ATTAAT 1 cut(s) 5771
PsiI TTATAA 1 cut(s) 1281
Psp124BI GAGCTC 2 cut(s) 3516, 4704
Psp1406I AACGTT 1 cut(s) 1090
Psp5II RGGWCCY 1 cut(s) 1347
PspCI CACGTG 3 cut(s) 4045, 5239, 5245
PspFI CCCAGC 1 cut(s) 1415
PspN4I GGNNCC 5 cut(s) 1348, 4251, 5493, 5627, 5673
PspOMI GGGCCC 1 cut(s) 5671
PspPPI RGGWCCY 1 cut(s) 1347
PstI CTGCAG 1 cut(s) 77
PsuI RGATCY 6 cut(s) 1696, 3818, 4594, 5021, 5819, 6021
PvuII CAGCTG 2 cut(s) 3209, 4397
RsaI GTAC 9 cut(s) 65, 215, 256, 516, 1264, 3995, 4916, 5192, 5661
RsaNI GTAC 9 cut(s) 64, 214, 255, 515, 1263, 3994, 4915, 5191, 5660
RseI CAYNNNNRTG 2 cut(s) 1589, 1637
SacI GAGCTC 2 cut(s) 3516, 4704
SapI GCTCTTC 1 cut(s) 2034
ScaI AGTACT 1 cut(s) 1264
SchI GAGTC 6 cut(s) 49, 2170, 2767, 2977, 5540, 5983
SexAI ACCWGGT 1 cut(s) 419
SfcI CTRYAG 3 cut(s) 73, 3307, 4495
SfuI TTCGAA 3 cut(s) 891, 3856, 5059
SinI GGWCC 7 cut(s) 699, 1347, 3727, 4250, 5492, 5618, 5625
SmiI ATTTAAAT 1 cut(s) 2280
SmiMI CAYNNNNRTG 2 cut(s) 1589, 1637
SnaBI TACGTA 1 cut(s) 5405
SseBI AGGCCT 3 cut(s) 4064, 4127, 5321
SspI AATATT 3 cut(s) 2194, 2263, 5769
SstI GAGCTC 2 cut(s) 3516, 4704
StuI AGGCCT 3 cut(s) 4064, 4127, 5321
StyI CCWWGG 1 cut(s) 5621
SwaI ATTTAAAT 1 cut(s) 2280
TaiI ACGT 8 cut(s) 1093, 1828, 4047, 4519, 5241, 5247, 5407, 5929
TatI WGTACW 6 cut(s) 63, 1262, 3993, 4914, 5190, 5659
TauI GCSGC 7 cut(s) 104, 759, 1038, 3496, 4684, 5116, 5119
TseFI GTSAC 3 cut(s) 4028, 5759, 5922
TseI GCWGC 8 cut(s) 72, 182, 278, 620, 3273, 4461, 4674, 5560
Tsp45I GTSAC 3 cut(s) 4028, 5759, 5922
TspGWI ACGGA 3 cut(s) 674, 1723, 5918
VneI GTGCAC 1 cut(s) 5240
VpaK11BI GGWCC 7 cut(s) 699, 1347, 3727, 4250, 5492, 5618, 5625
VspI ATTAAT 1 cut(s) 5771
XbaI TCTAGA 6 cut(s) 1906, 2639, 2780, 2990, 3137, 5599
XceI RCATGY 2 cut(s) 1500, 3774
XmiI GTMKAC 1 cut(s) 5031
XmnI GAANNNNTTC 3 cut(s) 2373, 3219, 4407
ZrmI AGTACT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.