MD05G1138300.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
26865387 .. 26868254
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1138300.v1.1.491

Sequence Viewer

Length: 1620 bp
ATGGGTGGTATTGGCAAGACCACCCTTGCTGAAGCCGTATTTAACAGACTCTCTTCTAAATTCGAAGCCTGTTGTTTTCTTAGAAATGTTAGGGAAAGAGAACAAAAAGATGGGCTAGAACACTTGCAAAATACACTTCTCAGTCATATATTAAAGGAAGAAGGTCTATCCATAGGATCAACTTTTGTTCGGGATAGGCTTAGCTGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAAATGGAAGGTTTAGCTGGCAATCGTCTTCGGTTTGGCAATGGAAGTAGAATCATCATCACAAGTAGAAATAAGGGCACACTTAGGCAAACCGTTGAAAAGGATAAAATCTATGAGGTTGGAAGATTAAATCCAGATGACGCTCTTCAGCTCTTCTGTTCGCGTGCTTTCAAGAATACTCGTATAACAGATTATAAGGGGTTGGCAGAAAAGGTGATGCATATTGCCGGAGGCATTCCTTTAGCTCTTATACTTCTGAGGTCCTCATTCCTAAATTGCAAGAGCAAAGCAGACTTGGAAGATGAATTGGACAAATTGAAACAATTTCCTAATGAAAATATCCAGAGAGTGTTGAGACTAAGTTATGATGGATTGAGAAGAAATGAGAAGGAGATATTTTTGGATATAGCATGTTTTCATAAAGGGCATGGTGTGGATGAGGTAAAACAATTGTTAGATGTTCGTGGATTCTCTGCGACGGTCGGAATTAGAATTCTCAGTGATATGTCTCTCATATCAATTGGTTCAAGATGGGGACGAGAAACCATAGAGATGCATGATCTGCTTGAAGAAATGGGAAGGACAATTGTTCAGGAACAATGTATTGAAGATCCCAGTAAGCGGAGTAGGTTATTCAACGATAAGGATGTTTATCATGTATTGAAAAGTAACAAGGAAACTTCAAATGTTGAAGCCATATTCCTTAATTATTATAACATTGCAGAGCGACCATTGAAACGTATAGACTTCAAACTGATGTCTAACCTAAGATTGCTAATTGTGGATGGTGGCTACAAGATCAATGCTTCTCTAGACCTTCCCGATTCTCTTCGTTATCTTTACTGGCCTAGATATCCAATGAAATCTTTGCCGTCAAATTTTTGTCCGGAAAATCTAGTTGAGCTTCACATGCCCAATAGCAAAGTTAAGAAGCTTTGGAAAGAAGACCAGAGACTTGTCAACTTAAAAGTGATCGATCTGTCGCGCTCTACAAATCTAACTGAAGTTCCAAGTCTTTCTGGGAGTCTAAAAATTGTGAACATAAATCTCTGTGGCTGTGAAAGTTTGGTTGAAATTCATGGGTGTTTTCAACATCTTGACAAGCTTACTCGTCTTGATCTTGGAGACTCGATCAGTCTCAATTATCTTCCAAAGATGCCAAGAAATATTAAATACTTGGATTTAGAAGGCAGTGGTATAAAGGAGTTGCCTGAATCAGTGTGGTCTAATGAAAATATTTCTTACTTGAATATAGGTTATTGCTATTACCTTGAGAAACTTCCAAGCAACAGTTGTAAGCTGAAAGTCTCTGGTAGTTTTGATCTATATGGCTGCATATCTCTTCGCGAGTTTTCTGAGGGATATAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

540

Amino Acids

61.48

Weight (kDa)

8.25

Isoelectric Point (pI)

46.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 143 4.9e-16 NB-ARC domain
WHD_ROQ1 PF23282 211 - 283 2.6e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 381 - 400 1.2e-06 Leucine Rich Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 444, 963
AccII CGCG 3 cut(s) 412, 1234, 1596
AccIII TCCGGA 1 cut(s) 1135
AciI CCGC 1 cut(s) 871
AclWI GGATC 2 cut(s) 184, 854
AcsI RAATTY 4 cut(s) 59, 741, 1126, 1323
AcuI CTGAAG 3 cut(s) 51, 380, 1272
AfaI GTAC 1 cut(s) 208
AfiI CCNNNNNNNGG 1 cut(s) 870
AluBI AGCT 8 cut(s) 204, 266, 400, 494, 1153, 1183, 1354, 1549
AluI AGCT 8 cut(s) 204, 266, 400, 494, 1153, 1183, 1354, 1549
Alw26I GTCTC 6 cut(s) 598, 762, 1195, 1368, 1391, 1561
AlwI GGATC 2 cut(s) 184, 854
Aor13HI TCCGGA 1 cut(s) 1135
AoxI GGCC 1 cut(s) 1094
ApeKI GCWGC 1 cut(s) 1581
ApoI RAATTY 4 cut(s) 59, 741, 1126, 1323
AspLEI GCGC 1 cut(s) 1236
AspS9I GGNCC 2 cut(s) 214, 510
AsuHPI GGTGA 1 cut(s) 475
AsuII TTCGAA 1 cut(s) 63
AvaII GGWCC 2 cut(s) 214, 510
BaeGI GKGCMC 1 cut(s) 329
BbsI GAAGAC 2 cut(s) 269, 1200
BbvI GCAGC 1 cut(s) 1568
BccI CCATC 4 cut(s) 104, 611, 774, 1028
BceAI ACGGC 2 cut(s) 20, 1105
BcoDI GTCTC 6 cut(s) 598, 762, 1195, 1368, 1391, 1561
BfaI CTAG 4 cut(s) 116, 1061, 1098, 1145
BisI GCNGC 1 cut(s) 1582
BlpI GCTNAGC 1 cut(s) 200
BlsI GCNGC 1 cut(s) 1583
Bme18I GGWCC 2 cut(s) 214, 510
BmgT120I GGNCC 2 cut(s) 214, 510
BmrI ACTGGG 1 cut(s) 858
BmsI GCATC 3 cut(s) 456, 792, 1395
BmuI ACTGGG 1 cut(s) 858
BpiI GAAGAC 2 cut(s) 269, 1200
Bpu1102I GCTNAGC 1 cut(s) 200
Bpu14I TTCGAA 1 cut(s) 63
BpuEI CTTGAG 1 cut(s) 1541
Bsa29I ATCGAT 1 cut(s) 1224
BsaBI GATNNNNATC 1 cut(s) 900
BsaWI WCCGGW 1 cut(s) 1135
Bsc4I CCNNNNNNNGG 1 cut(s) 870
Bse1I ACTGG 2 cut(s) 864, 1097
Bse3DI GCAATG 2 cut(s) 295, 966
Bse8I GATNNNNATC 1 cut(s) 900
BseAI TCCGGA 1 cut(s) 1135
BseCI ATCGAT 1 cut(s) 1224
BseGI GGATG 3 cut(s) 691, 901, 1039
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 1 cut(s) 870
BseMI GCAATG 2 cut(s) 295, 966
BseMII CTCAG 4 cut(s) 154, 497, 760, 1596
BseNI ACTGG 2 cut(s) 864, 1097
BseSI GKGCMC 1 cut(s) 329
BseXI GCAGC 1 cut(s) 1568
Bsh1236I CGCG 3 cut(s) 412, 1234, 1596
Bsh1285I CGRYCG 1 cut(s) 732
BshFI GGCC 1 cut(s) 1096
BshVI ATCGAT 1 cut(s) 1224
BsiEI CGRYCG 1 cut(s) 732
BsiSI CCGG 2 cut(s) 477, 1136
BslFI GGGAC 1 cut(s) 798
BslI CCNNNNNNNGG 1 cut(s) 870
BsmAI GTCTC 6 cut(s) 598, 762, 1195, 1368, 1391, 1561
BsmFI GGGAC 1 cut(s) 798
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 1 cut(s) 1096
Bsp119I TTCGAA 1 cut(s) 63
Bsp1286I GDGCHC 1 cut(s) 329
Bsp13I TCCGGA 1 cut(s) 1135
Bsp1407I TGTACA 1 cut(s) 206
Bsp143I GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
Bsp1720I GCTNAGC 1 cut(s) 200
Bsp68I TCGCGA 1 cut(s) 1596
BspACI CCGC 1 cut(s) 871
BspANI GGCC 1 cut(s) 1096
BspCNI CTCAG 4 cut(s) 153, 498, 759, 1597
BspDI ATCGAT 1 cut(s) 1224
BspEI TCCGGA 1 cut(s) 1135
BspFNI CGCG 3 cut(s) 412, 1234, 1596
BspPI GGATC 2 cut(s) 184, 854
BspQI GCTCTTC 2 cut(s) 399, 407
BspT104I TTCGAA 1 cut(s) 63
BsrDI GCAATG 2 cut(s) 295, 966
BsrGI TGTACA 1 cut(s) 206
BsrI ACTGG 2 cut(s) 864, 1097
BssMI GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
Bst4CI ACNGT 3 cut(s) 343, 730, 1541
Bst6I CTCTTC 5 cut(s) 58, 399, 407, 1083, 1596
BstAPI GCANNNNNTGC 1 cut(s) 811
BstAUI TGTACA 1 cut(s) 206
BstBI TTCGAA 1 cut(s) 63
BstC8I GCNNGC 2 cut(s) 268, 414
BstDEI CTNAG 9 cut(s) 80, 140, 200, 332, 506, 608, 746, 1016, 1605
BstF5I GGATG 3 cut(s) 691, 901, 1039
BstFNI CGCG 3 cut(s) 412, 1234, 1596
BstHHI GCGC 1 cut(s) 1236
BstKTI GATC 9 cut(s) 179, 811, 862, 1050, 1224, 1228, 1369, 1383, 1573
BstMAI GTCTC 6 cut(s) 598, 762, 1195, 1368, 1391, 1561
BstMBI GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
BstMCI CGRYCG 1 cut(s) 732
BstMWI GCNNNNNNNGC 2 cut(s) 811, 1159
BstNSI RCATGY 2 cut(s) 663, 1162
BstSLI GKGCMC 1 cut(s) 329
BstUI CGCG 3 cut(s) 412, 1234, 1596
BstV1I GCAGC 1 cut(s) 1568
BstV2I GAAGAC 2 cut(s) 269, 1200
BstX2I RGATCY 1 cut(s) 859
BstYI RGATCY 1 cut(s) 859
Bsu15I ATCGAT 1 cut(s) 1224
BsuRI GGCC 1 cut(s) 1096
BsuTUI ATCGAT 1 cut(s) 1224
BtsCI GGATG 3 cut(s) 691, 901, 1039
BtsI GCAGTG 1 cut(s) 1447
BtsIMutI CAGTG 3 cut(s) 754, 1447, 1473
BtuMI TCGCGA 1 cut(s) 1596
Cac8I GCNNGC 2 cut(s) 268, 414
CfoI GCGC 1 cut(s) 1236
Cfr13I GGNCC 2 cut(s) 214, 510
ClaI ATCGAT 1 cut(s) 1224
CseI GACGC 1 cut(s) 398
Csp6I GTAC 1 cut(s) 207
CviAII CATG 6 cut(s) 660, 677, 806, 905, 1159, 1328
CviQI GTAC 1 cut(s) 207
DdeI CTNAG 9 cut(s) 80, 140, 200, 332, 506, 608, 746, 1016, 1605
DpnI GATC 9 cut(s) 178, 810, 861, 1049, 1223, 1227, 1368, 1382, 1572
DpnII GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
Eam1104I CTCTTC 5 cut(s) 58, 399, 407, 1083, 1596
EarI CTCTTC 5 cut(s) 58, 399, 407, 1083, 1596
Eco32I GATATC 1 cut(s) 1103
Eco47I GGWCC 2 cut(s) 214, 510
Eco57I CTGAAG 3 cut(s) 51, 380, 1272
EcoO109I RGGNCCY 2 cut(s) 214, 510
EcoRI GAATTC 1 cut(s) 741
EcoRV GATATC 1 cut(s) 1103
EcoT22I ATGCAT 2 cut(s) 471, 807
FaeI CATG 6 cut(s) 663, 680, 809, 908, 1162, 1331
FaqI GGGAC 1 cut(s) 798
FatI CATG 6 cut(s) 659, 676, 805, 904, 1158, 1327
Fnu4HI GCNGC 1 cut(s) 1582
FokI GGATG 3 cut(s) 698, 908, 1046
Fsp4HI GCNGC 1 cut(s) 1582
FspBI CTAG 4 cut(s) 116, 1061, 1098, 1145
GlaI GCGC 1 cut(s) 1235
GluI GCNGC 1 cut(s) 1582
HaeIII GGCC 1 cut(s) 1096
HapII CCGG 2 cut(s) 477, 1136
HgaI GACGC 1 cut(s) 398
HhaI GCGC 1 cut(s) 1236
Hin1II CATG 6 cut(s) 663, 680, 809, 908, 1162, 1331
Hin6I GCGC 1 cut(s) 1234
HinP1I GCGC 1 cut(s) 1234
HincII GTYRAC 1 cut(s) 1210
HindII GTYRAC 1 cut(s) 1210
HindIII AAGCTT 2 cut(s) 1181, 1352
HinfI GANTC 8 cut(s) 48, 242, 300, 717, 1073, 1273, 1376, 1463
HpaII CCGG 2 cut(s) 477, 1136
HphI GGTGA 1 cut(s) 475
Hpy166II GTNNAC 2 cut(s) 1210, 1288
Hpy188I TCNGA 3 cut(s) 507, 734, 1606
Hpy8I GTNNAC 2 cut(s) 1210, 1288
Hpy99I CGWCG 1 cut(s) 730
HpyAV CCTTC 6 cut(s) 155, 251, 631, 822, 1076, 1430
HpyCH4III ACNGT 3 cut(s) 343, 730, 1541
HpyCH4IV ACGT 1 cut(s) 988
HpyCH4V TGCA 7 cut(s) 127, 250, 469, 528, 805, 971, 1584
HpyF10VI GCNNNNNNNGC 2 cut(s) 811, 1159
HpyF3I CTNAG 9 cut(s) 80, 140, 200, 332, 506, 608, 746, 1016, 1605
HpySE526I ACGT 1 cut(s) 988
Hsp92II CATG 6 cut(s) 663, 680, 809, 908, 1162, 1331
HspAI GCGC 1 cut(s) 1234
Kpn2I TCCGGA 1 cut(s) 1135
Kzo9I GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
LguI GCTCTTC 2 cut(s) 399, 407
Lsp1109I GCAGC 1 cut(s) 1568
LweI GCATC 3 cut(s) 456, 792, 1395
MaeI CTAG 4 cut(s) 116, 1061, 1098, 1145
MaeII ACGT 1 cut(s) 988
MaeIII GTNAC 1 cut(s) 917
MalI GATC 9 cut(s) 178, 810, 861, 1049, 1223, 1227, 1368, 1382, 1572
MboI GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
MfeI CAATTG 3 cut(s) 698, 768, 834
MflI RGATCY 1 cut(s) 859
MhlI GDGCHC 1 cut(s) 329
MlyI GAGTC 3 cut(s) 42, 1282, 1370
MmeI TCCRAC 2 cut(s) 349, 712
MnlI CCTC 7 cut(s) 227, 358, 473, 501, 523, 682, 1600
Mph1103I ATGCAT 2 cut(s) 471, 807
MroI TCCGGA 1 cut(s) 1135
MseI TTAA 7 cut(s) 42, 152, 377, 954, 1176, 1214, 1419
MslI CAYNNNNRTG 1 cut(s) 800
MspI CCGG 2 cut(s) 477, 1136
MunI CAATTG 3 cut(s) 698, 768, 834
Mva1269I GAATGC 1 cut(s) 483
MvnI CGCG 3 cut(s) 412, 1234, 1596
MwoI GCNNNNNNNGC 2 cut(s) 811, 1159
NdeII GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
NlaIII CATG 6 cut(s) 663, 680, 809, 908, 1162, 1331
NruI TCGCGA 1 cut(s) 1596
NsiI ATGCAT 2 cut(s) 471, 807
NspI RCATGY 2 cut(s) 663, 1162
NspV TTCGAA 1 cut(s) 63
PciSI GCTCTTC 2 cut(s) 399, 407
PctI GAATGC 1 cut(s) 483
PfeI GAWTC 5 cut(s) 242, 300, 717, 1073, 1463
PkrI GCNGC 1 cut(s) 1583
PleI GAGTC 3 cut(s) 42, 1281, 1370
PpsI GAGTC 3 cut(s) 42, 1281, 1370
PpuMI RGGWCCY 2 cut(s) 214, 510
PsiI TTATAA 2 cut(s) 444, 963
Psp5II RGGWCCY 2 cut(s) 214, 510
PspPI GGNCC 2 cut(s) 214, 510
PspPPI RGGWCCY 2 cut(s) 214, 510
PsuI RGATCY 1 cut(s) 859
RruI TCGCGA 1 cut(s) 1596
RsaI GTAC 1 cut(s) 208
RsaNI GTAC 1 cut(s) 207
RseI CAYNNNNRTG 1 cut(s) 800
SapI GCTCTTC 2 cut(s) 399, 407
SaqAI TTAA 7 cut(s) 42, 152, 377, 954, 1176, 1214, 1419
SatI GCNGC 1 cut(s) 1582
Sau3AI GATC 9 cut(s) 176, 808, 859, 1047, 1221, 1225, 1366, 1380, 1570
Sau96I GGNCC 2 cut(s) 214, 510
SchI GAGTC 3 cut(s) 42, 1282, 1370
SduI GDGCHC 1 cut(s) 329
SfaNI GCATC 3 cut(s) 456, 792, 1395
SfuI TTCGAA 1 cut(s) 63
SinI GGWCC 2 cut(s) 214, 510
SmiMI CAYNNNNRTG 1 cut(s) 800
SmlI CTYRAG 1 cut(s) 1520
SmoI CTYRAG 1 cut(s) 1520
SsiI CCGC 1 cut(s) 871
SspI AATATT 2 cut(s) 1417, 1486
SspMI CTAG 4 cut(s) 116, 1061, 1098, 1145
TaaI ACNGT 3 cut(s) 343, 730, 1541
TaiI ACGT 1 cut(s) 991
TaqI TCGA 3 cut(s) 63, 1224, 1379
TatI WGTACW 1 cut(s) 206
TfiI GAWTC 5 cut(s) 242, 300, 717, 1073, 1463
Tru1I TTAA 7 cut(s) 42, 152, 377, 954, 1176, 1214, 1419
Tru9I TTAA 7 cut(s) 42, 152, 377, 954, 1176, 1214, 1419
TscAI CASTG 3 cut(s) 754, 1447, 1473
TseI GCWGC 1 cut(s) 1581
TspDTI ATGAA 6 cut(s) 567, 597, 656, 1124, 1316, 1494
TspRI CASTG 3 cut(s) 754, 1447, 1473
VpaK11BI GGWCC 2 cut(s) 214, 510
XapI RAATTY 4 cut(s) 59, 741, 1126, 1323
XbaI TCTAGA 1 cut(s) 1060
XceI RCATGY 2 cut(s) 663, 1162
XspI CTAG 4 cut(s) 116, 1061, 1098, 1145
Zsp2I ATGCAT 2 cut(s) 471, 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.