TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_13 | PF23286 | 154 - 230 | 3.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 684 |
| AccII | CGCG | 1 cut(s) | 741 |
| AciI | CCGC | 1 cut(s) | 682 |
| AclWI | GGATC | 1 cut(s) | 603 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 3 cut(s) | 387, 489, 649 |
| AcuI | CTGAAG | 2 cut(s) | 210, 875 |
| AfaI | GTAC | 5 cut(s) | 98, 104, 110, 728, 794 |
| AflII | CTTAAG | 1 cut(s) | 617 |
| AgsI | TTSAA | 3 cut(s) | 419, 532, 649 |
| AjnI | CCWGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| Alw21I | GWGCWC | 1 cut(s) | 342 |
| Alw26I | GTCTC | 1 cut(s) | 576 |
| AlwI | GGATC | 1 cut(s) | 603 |
| Ama87I | CYCGRG | 2 cut(s) | 380, 575 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 3 cut(s) | 258, 633, 678 |
| ApoI | RAATTY | 3 cut(s) | 387, 489, 649 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 850, 882 |
| AspLEI | GCGC | 3 cut(s) | 741, 743, 809 |
| AsuHPI | GGTGA | 2 cut(s) | 341, 383 |
| AsuII | TTCGAA | 1 cut(s) | 57 |
| AvaI | CYCGRG | 2 cut(s) | 380, 575 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 2 cut(s) | 863, 929 |
| Bbv12I | GWGCWC | 1 cut(s) | 342 |
| BbvI | GCAGC | 3 cut(s) | 270, 645, 665 |
| BccI | CCATC | 1 cut(s) | 220 |
| BciT130I | CCWGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| BciVI | GTATCC | 1 cut(s) | 27 |
| BcoDI | GTCTC | 1 cut(s) | 576 |
| BfaI | CTAG | 2 cut(s) | 83, 671 |
| BfmI | CTRYAG | 1 cut(s) | 929 |
| BfrI | CTTAAG | 1 cut(s) | 617 |
| BfuI | GTATCC | 1 cut(s) | 27 |
| BglII | AGATCT | 1 cut(s) | 85 |
| BisI | GCNGC | 4 cut(s) | 259, 634, 679, 682 |
| BlsI | GCNGC | 4 cut(s) | 260, 635, 680, 683 |
| Bme1390I | CCNGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| BmeT110I | CYCGRG | 2 cut(s) | 380, 575 |
| BmrFI | CCNGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| BmsI | GCATC | 4 cut(s) | 54, 59, 154, 492 |
| BpiI | GAAGAC | 2 cut(s) | 863, 929 |
| BpmI | CTGGAG | 3 cut(s) | 126, 743, 809 |
| Bpu14I | TTCGAA | 1 cut(s) | 57 |
| BpuEI | CTTGAG | 3 cut(s) | 287, 323, 710 |
| BsaAI | YACGTR | 1 cut(s) | 40 |
| BsaI | GGTCTC | 1 cut(s) | 576 |
| BsaJI | CCNNGG | 2 cut(s) | 114, 394 |
| BseBI | CCWGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| BseDI | CCNNGG | 2 cut(s) | 114, 394 |
| BseGI | GGATG | 1 cut(s) | 50 |
| BsePI | GCGCGC | 1 cut(s) | 739 |
| BseXI | GCAGC | 3 cut(s) | 270, 645, 665 |
| BseYI | CCCAGC | 1 cut(s) | 254 |
| BsgI | GTGCAG | 1 cut(s) | 311 |
| Bsh1236I | CGCG | 1 cut(s) | 741 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKAI | GWGCWC | 1 cut(s) | 342 |
| BsiHKCI | CYCGRG | 2 cut(s) | 380, 575 |
| BsmAI | GTCTC | 1 cut(s) | 576 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bso31I | GGTCTC | 1 cut(s) | 576 |
| BsoBI | CYCGRG | 2 cut(s) | 380, 575 |
| Bsp119I | TTCGAA | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 342 |
| Bsp143I | GATC | 3 cut(s) | 85, 294, 595 |
| BspACI | CCGC | 1 cut(s) | 682 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspFNI | CGCG | 1 cut(s) | 741 |
| BspPI | GGATC | 1 cut(s) | 603 |
| BspT104I | TTCGAA | 1 cut(s) | 57 |
| BspTI | CTTAAG | 1 cut(s) | 617 |
| BspTNI | GGTCTC | 1 cut(s) | 576 |
| BsrBI | CCGCTC | 1 cut(s) | 684 |
| BssECI | CCNNGG | 2 cut(s) | 114, 394 |
| BssHII | GCGCGC | 1 cut(s) | 739 |
| BssMI | GATC | 3 cut(s) | 85, 294, 595 |
| BssT1I | CCWWGG | 1 cut(s) | 394 |
| Bst2UI | CCWGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| Bst4CI | ACNGT | 2 cut(s) | 541, 930 |
| BstAFI | CTTAAG | 1 cut(s) | 617 |
| BstBAI | YACGTR | 1 cut(s) | 40 |
| BstBI | TTCGAA | 1 cut(s) | 57 |
| BstC8I | GCNNGC | 5 cut(s) | 290, 676, 741, 745, 811 |
| BstDEI | CTNAG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 50 |
| BstFNI | CGCG | 1 cut(s) | 741 |
| BstHHI | GCGC | 3 cut(s) | 741, 743, 809 |
| BstKTI | GATC | 3 cut(s) | 88, 297, 598 |
| BstMAI | GTCTC | 1 cut(s) | 576 |
| BstMBI | GATC | 3 cut(s) | 85, 294, 595 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 250, 706, 772, 838, 904 |
| BstNI | CCWGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| BstSCI | CCNGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| BstSFI | CTRYAG | 1 cut(s) | 929 |
| BstUI | CGCG | 1 cut(s) | 741 |
| BstV1I | GCAGC | 3 cut(s) | 270, 645, 665 |
| BstV2I | GAAGAC | 2 cut(s) | 863, 929 |
| BstX2I | RGATCY | 2 cut(s) | 85, 595 |
| BstYI | RGATCY | 2 cut(s) | 85, 595 |
| BsuI | GTATCC | 1 cut(s) | 27 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 50 |
| BtsI | GCAGTG | 1 cut(s) | 860 |
| BtsIMutI | CAGTG | 2 cut(s) | 860, 926 |
| Cac8I | GCNNGC | 5 cut(s) | 290, 676, 741, 745, 811 |
| CfoI | GCGC | 3 cut(s) | 741, 743, 809 |
| Csp6I | GTAC | 5 cut(s) | 97, 103, 109, 727, 793 |
| CviAII | CATG | 1 cut(s) | 7 |
| CviQI | GTAC | 5 cut(s) | 97, 103, 109, 727, 793 |
| DdeI | CTNAG | 1 cut(s) | 74 |
| DpnI | GATC | 3 cut(s) | 87, 296, 597 |
| DpnII | GATC | 3 cut(s) | 85, 294, 595 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 394 |
| Eco31I | GGTCTC | 1 cut(s) | 576 |
| Eco57I | CTGAAG | 2 cut(s) | 210, 875 |
| Eco88I | CYCGRG | 2 cut(s) | 380, 575 |
| EcoRI | GAATTC | 2 cut(s) | 387, 649 |
| EcoRII | CCWGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| EcoT14I | CCWWGG | 1 cut(s) | 394 |
| EcoT22I | ATGCAT | 1 cut(s) | 69 |
| ErhI | CCWWGG | 1 cut(s) | 394 |
| FaeI | CATG | 1 cut(s) | 10 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 622, 654 |
| FatI | CATG | 1 cut(s) | 6 |
| FauNDI | CATATG | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 4 cut(s) | 259, 634, 679, 682 |
| FokI | GGATG | 1 cut(s) | 37 |
| Fsp4HI | GCNGC | 4 cut(s) | 259, 634, 679, 682 |
| FspBI | CTAG | 2 cut(s) | 83, 671 |
| GlaI | GCGC | 3 cut(s) | 740, 742, 808 |
| GluI | GCNGC | 4 cut(s) | 259, 634, 679, 682 |
| GsaI | CCCAGC | 1 cut(s) | 258 |
| GsuI | CTGGAG | 3 cut(s) | 126, 743, 809 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HhaI | GCGC | 3 cut(s) | 741, 743, 809 |
| Hin1II | CATG | 1 cut(s) | 10 |
| Hin6I | GCGC | 3 cut(s) | 739, 741, 807 |
| HinP1I | GCGC | 3 cut(s) | 739, 741, 807 |
| HindIII | AAGCTT | 1 cut(s) | 449 |
| HphI | GGTGA | 2 cut(s) | 341, 383 |
| Hpy166II | GTNNAC | 1 cut(s) | 111 |
| Hpy188I | TCNGA | 5 cut(s) | 229, 337, 363, 438, 537 |
| Hpy188III | TCNNGA | 7 cut(s) | 302, 380, 382, 515, 575, 577, 689 |
| Hpy8I | GTNNAC | 1 cut(s) | 111 |
| HpyAV | CCTTC | 8 cut(s) | 64, 146, 435, 567, 723, 789, 855, 921 |
| HpyCH4III | ACNGT | 2 cut(s) | 541, 930 |
| HpyCH4IV | ACGT | 2 cut(s) | 39, 316 |
| HpyCH4V | TGCA | 6 cut(s) | 50, 67, 133, 292, 865, 879 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 250, 706, 772, 838, 904 |
| HpyF3I | CTNAG | 1 cut(s) | 74 |
| HpySE526I | ACGT | 2 cut(s) | 39, 316 |
| Hsp92II | CATG | 1 cut(s) | 10 |
| HspAI | GCGC | 3 cut(s) | 739, 741, 807 |
| Kzo9I | GATC | 3 cut(s) | 85, 294, 595 |
| LmnI | GCTCC | 2 cut(s) | 482, 660 |
| Lsp1109I | GCAGC | 3 cut(s) | 270, 645, 665 |
| LweI | GCATC | 4 cut(s) | 54, 59, 154, 492 |
| MaeI | CTAG | 2 cut(s) | 83, 671 |
| MaeII | ACGT | 2 cut(s) | 39, 316 |
| MaeIII | GTNAC | 1 cut(s) | 329 |
| MalI | GATC | 3 cut(s) | 87, 296, 597 |
| MbiI | CCGCTC | 1 cut(s) | 684 |
| MboI | GATC | 3 cut(s) | 85, 294, 595 |
| MboII | GAAGA | 4 cut(s) | 216, 560, 617, 868 |
| MflI | RGATCY | 2 cut(s) | 85, 595 |
| MhlI | GDGCHC | 1 cut(s) | 342 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 128, 387, 489, 551, 564, 649, 874 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 6 cut(s) | 326, 379, 701, 760, 826, 892 |
| MnlI | CCTC | 3 cut(s) | 150, 174, 210 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 69 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 6 cut(s) | 24, 171, 311, 524, 618, 666 |
| MslI | CAYNNNNRTG | 1 cut(s) | 11 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspCI | CTTAAG | 1 cut(s) | 617 |
| MspR9I | CCNGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| MvaI | CCWGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| MvnI | CGCG | 1 cut(s) | 741 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 250, 706, 772, 838, 904 |
| NdeI | CATATG | 1 cut(s) | 249 |
| NdeII | GATC | 3 cut(s) | 85, 294, 595 |
| NlaIII | CATG | 1 cut(s) | 10 |
| NmuCI | GTSAC | 1 cut(s) | 329 |
| NsiI | ATGCAT | 1 cut(s) | 69 |
| NspV | TTCGAA | 1 cut(s) | 57 |
| PaeR7I | CTCGAG | 2 cut(s) | 380, 575 |
| PauI | GCGCGC | 1 cut(s) | 739 |
| PfeI | GAWTC | 4 cut(s) | 439, 532, 580, 622 |
| PkrI | GCNGC | 4 cut(s) | 260, 635, 680, 683 |
| PleI | GAGTC | 6 cut(s) | 326, 378, 700, 759, 825, 891 |
| PpsI | GAGTC | 6 cut(s) | 326, 378, 700, 759, 825, 891 |
| Ppu21I | YACGTR | 1 cut(s) | 40 |
| Psp6I | CCWGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| PspFI | CCCAGC | 1 cut(s) | 254 |
| PspGI | CCWGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| PsuI | RGATCY | 2 cut(s) | 85, 595 |
| PteI | GCGCGC | 1 cut(s) | 739 |
| RsaI | GTAC | 5 cut(s) | 98, 104, 110, 728, 794 |
| RsaNI | GTAC | 5 cut(s) | 97, 103, 109, 727, 793 |
| RseI | CAYNNNNRTG | 1 cut(s) | 11 |
| SaqAI | TTAA | 6 cut(s) | 24, 171, 311, 524, 618, 666 |
| SatI | GCNGC | 4 cut(s) | 259, 634, 679, 682 |
| Sau3AI | GATC | 3 cut(s) | 85, 294, 595 |
| SchI | GAGTC | 6 cut(s) | 326, 379, 701, 760, 826, 892 |
| ScrFI | CCNGG | 5 cut(s) | 115, 144, 344, 731, 797 |
| SduI | GDGCHC | 1 cut(s) | 342 |
| SfaNI | GCATC | 4 cut(s) | 54, 59, 154, 492 |
| SfcI | CTRYAG | 1 cut(s) | 929 |
| Sfr274I | CTCGAG | 2 cut(s) | 380, 575 |
| SfuI | TTCGAA | 1 cut(s) | 57 |
| SlaI | CTCGAG | 2 cut(s) | 380, 575 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 11 |
| SmlI | CTYRAG | 6 cut(s) | 266, 302, 380, 575, 617, 689 |
| SmoI | CTYRAG | 6 cut(s) | 266, 302, 380, 575, 617, 689 |
| Sse9I | AATT | 7 cut(s) | 128, 387, 489, 551, 564, 649, 874 |
| SsiI | CCGC | 1 cut(s) | 682 |
| SspI | AATATT | 1 cut(s) | 176 |
| SspMI | CTAG | 2 cut(s) | 83, 671 |
| StyD4I | CCNGG | 5 cut(s) | 113, 142, 342, 729, 795 |
| StyI | CCWWGG | 1 cut(s) | 394 |
| TaaI | ACNGT | 2 cut(s) | 541, 930 |
| TaiI | ACGT | 2 cut(s) | 42, 319 |
| TaqI | TCGA | 9 cut(s) | 57, 150, 215, 240, 381, 576, 705, 837, 903 |
| TasI | AATT | 7 cut(s) | 128, 387, 489, 551, 564, 649, 874 |
| TauI | GCSGC | 1 cut(s) | 684 |
| TfiI | GAWTC | 4 cut(s) | 439, 532, 580, 622 |
| Tru1I | TTAA | 6 cut(s) | 24, 171, 311, 524, 618, 666 |
| Tru9I | TTAA | 6 cut(s) | 24, 171, 311, 524, 618, 666 |
| TscAI | CASTG | 2 cut(s) | 867, 933 |
| TseFI | GTSAC | 1 cut(s) | 329 |
| TseI | GCWGC | 3 cut(s) | 258, 633, 678 |
| Tsp45I | GTSAC | 1 cut(s) | 329 |
| TspDTI | ATGAA | 4 cut(s) | 23, 236, 417, 549 |
| TspRI | CASTG | 2 cut(s) | 867, 933 |
| Vha464I | CTTAAG | 1 cut(s) | 617 |
| XapI | RAATTY | 3 cut(s) | 387, 489, 649 |
| XhoI | CTCGAG | 2 cut(s) | 380, 575 |
| XspI | CTAG | 2 cut(s) | 83, 671 |
| Zsp2I | ATGCAT | 1 cut(s) | 69 |