Rroxscaffold_164G00436430

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000164
Physical Location & Seq
Reverse (-)
332905 .. 337391
4487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_164G00436430.1

Sequence Viewer

Length: 1821 bp
ATGGCTAACTCTTCTGTTTCTTCTTCTGTCATCCGCCCAAAAGAAAAGTATGATGTCTTTCTCAGTTTCAGAGGCCAGGATACTCGCAGGACTTTTACCAGCCATCTTCATGCTGCTCTGATAAGGAGGAAAGTGGAAACCTACATTGATTACAGACTTGAGAGGGGAGAGGAAGTTGGACCCGCCCTATTAAAAGCAATCAAGGAATCAAAGATTTCCGTGATCATTTTCTCAAAAGATTATGCTTCTTCCACATGGTGCTTGGATGAACTTGCTTATATACTGGAACGCAAGGAAACACATGCGCAACATGTTATACCTATTTTTTACAAAATAGATCCAGCACATGTACGCTACCAGAGAGGAAGTTATAAGACTGCATTTGCTAAACATGAACGGAGGTTGAAGGACAAGACGGGAAAGGTGCCCAAGTGGAAGGAAGCTTTAGTAAAAGCGGCCAATCTATCTGGGTTTGATTCAGCTTCAAGAACTGTTGGGCATGATTCCGATTTAATTGAGCAAGTTGTCAAAGAAGTGTTGGCTAAATTGAATCGTGAATCGTCAAGCGATTTAACTGGTTTGATTGGAGTTGAAGGCCGCATTAGGAAAATTTTATTGGAATTAGACATCGTCCCAGAAGATGTTCGTGTTCGCTCTGGAACTGCCAGAGTACGCGGCATTTCCAGCAGGAATTGTGTTAACTGGCTAATGTTGGATCCTGAAGCTTTCTCAGGGATGCATAACTTAAGATCTCTTATGCTTAGATTTATACATCTTGACAACAAGGCAAATCTAGAGTATCTTCCTAATGCCCTTCAATATGTGTATTGGCATAGTTACCCTTTGAAATCTTTGCCATCAAAGTTTTTCCCAGTCAATCTTGTTGAGCTTCATATGCCCTGGAGCAACCTTAAGAGACTTTGGAAAAAAGGCCAGAATCCTGAGAACTTGAAAAGGATCGATCTTAGTTACTCCATGAACCTGGCTGAAGTTGGAGAGCTGTCAAATAGTGTAAACATTGAGAGTATAACTCTTCAAGGCTGTAAAAATTTGGTTCAAGTTCCGGATTTGTCAAAGTGTGTACACATTAAGAGTATAAATCTCCTAGGCTGTGTAAGTTTGGTTCAAGTTCCAGACCTGTCAAAGAGTGTAAACATTGAGAGTATAAATCTTCAAAGCTGTGCAGGTTTGATTCAAGTTCCTTCAGACTTTCAAAAGTTTACCAAACTTACTCATCTGAATTTGGGATATTGCTCCAAGATCAGTACTCTACCGAAGATACCGAGCAAGATGGAATTCTTAGATTTAAGTGAAACTGCAATAGAGGAATTGCCTTCATCAATTTGGTCTCTTGAAAAACTTGTTAAATTGAATCTTCATTGCTGTAGCTTTCCCGCATTGCAAGTCTTAGATCTAAGTAAAACCATGATTGAGACAATCCCTCCCACCATCAAACAAGTTTCTGGGCTCAAGTCTCTGAGACTTGCTATGTGCGAGCGGCTTCAATCTTTGCCAGTGCTCCCATGTCTTCTTGAAGAATTGAATGCAGAGGGGTGCAAGAGACTTGAGACTGTGTCAGTTTCAGTGGCTACACAGACACAAGGTTTGGATCAAACAGTTTCTGGGAAAAAGAAAGAGAGGACCGAGAGACATACATATTATGGTTGCGATAATTTGGATAAAAATGCAAGGAGCAACATAATGGATGATGCACACTTCAGAATTATGCGAATGGCAACTGCTTGTAATCTTGTAAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATAACCATGACGTTTAA

Protein Analysis

606

Amino Acids

68.37

Weight (kDa)

9.07

Isoelectric Point (pI)

45.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 194 1.9e-53 TIR domain
TIR_2 PF13676 19 - 114 9.8e-14 TIR domain
LRR_14 PF23598 362 - 465 2.4e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 372
Acc16I TGCGCA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 1175
AccB1I GGYRCC 1 cut(s) 424
AccBSI CCGCTC 1 cut(s) 1498
AccII CGCG 1 cut(s) 675
AccIII TCCGGA 1 cut(s) 1063
AciI CCGC 7 cut(s) 34, 183, 455, 598, 675, 1395, 1498
AclWI GGATC 5 cut(s) 332, 710, 723, 965, 1617
AcoI YGGCCR 1 cut(s) 456
AcsI RAATTY 4 cut(s) 609, 1048, 1240, 1295
AcuI CTGAAG 4 cut(s) 741, 1008, 1188, 1702
AdeI CACNNNGTG 1 cut(s) 258
AfaI GTAC 4 cut(s) 351, 672, 1083, 1267
AflII CTTAAG 2 cut(s) 745, 911
AflIII ACRYGT 2 cut(s) 310, 346
AjnI CCWGG 3 cut(s) 75, 899, 981
AjuI GAANNNNNNNTTGG 2 cut(s) 599, 631
AluBI AGCT 7 cut(s) 443, 482, 725, 889, 1000, 1179, 1389
AluI AGCT 7 cut(s) 443, 482, 725, 889, 1000, 1179, 1389
Alw21I GWGCWC 1 cut(s) 1521
Alw26I GTCTC 9 cut(s) 910, 1353, 1427, 1474, 1479, 1555, 1562, 1642, 1763
AlwI GGATC 5 cut(s) 332, 710, 723, 965, 1617
AlwNI CAGNNNCTG 1 cut(s) 1622
Aor13HI TCCGGA 1 cut(s) 1063
AoxI GGCC 4 cut(s) 73, 456, 595, 931
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 4 cut(s) 609, 1048, 1240, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 1588, 1620
Asp700I GAANNNNTTC 1 cut(s) 642
AspA2I CCTAGG 1 cut(s) 1105
AspLEI GCGC 1 cut(s) 307
AspS9I GGNCC 2 cut(s) 179, 1641
AvaII GGWCC 2 cut(s) 179, 1641
AvrII CCTAGG 1 cut(s) 1105
BaeGI GKGCMC 1 cut(s) 429
BamHI GGATCC 1 cut(s) 715
BanI GGYRCC 1 cut(s) 424
BanII GRGCYC 1 cut(s) 1470
BbsI GAAGAC 1 cut(s) 1520
Bbv12I GWGCWC 1 cut(s) 1521
BbvI GCAGC 1 cut(s) 100
BccI CCATC 4 cut(s) 111, 865, 1285, 1457
BciT130I CCWGG 3 cut(s) 77, 901, 983
BciVI GTATCC 1 cut(s) 73
BclI TGATCA 1 cut(s) 222
BcoDI GTCTC 9 cut(s) 910, 1353, 1427, 1474, 1479, 1555, 1562, 1642, 1763
BfaI CTAG 2 cut(s) 794, 1106
BfmI CTRYAG 1 cut(s) 1384
BfrI CTTAAG 2 cut(s) 745, 911
BfuAI ACCTGC 1 cut(s) 1175
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 2 cut(s) 749, 1411
BisI GCNGC 5 cut(s) 114, 456, 598, 676, 1499
BlnI CCTAGG 1 cut(s) 1105
BlsI GCNGC 5 cut(s) 115, 457, 599, 677, 1500
BmcAI AGTACT 1 cut(s) 1267
Bme1390I CCNGG 3 cut(s) 77, 901, 983
Bme18I GGWCC 2 cut(s) 179, 1641
BmgT120I GGNCC 2 cut(s) 179, 1641
BmiI GGNNCC 3 cut(s) 181, 426, 717
BmrFI CCNGG 3 cut(s) 77, 901, 983
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 2 cut(s) 726, 1699
BmuI ACTGGG 1 cut(s) 866
BpiI GAAGAC 1 cut(s) 1520
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 1 cut(s) 922
BpuEI CTTGAG 3 cut(s) 179, 1454, 1586
Bsa29I ATCGAT 1 cut(s) 960
BsaI GGTCTC 1 cut(s) 1353
BsaJI CCNNGG 2 cut(s) 899, 1105
BsaWI WCCGGW 1 cut(s) 1063
BsaXI ACNNNNNCTCC 4 cut(s) 159, 189, 1426, 1456
Bse1I ACTGG 5 cut(s) 288, 580, 707, 872, 1514
Bse3DI GCAATG 2 cut(s) 1378, 1397
BseAI TCCGGA 1 cut(s) 1063
BseBI CCWGG 3 cut(s) 77, 901, 983
BseCI ATCGAT 1 cut(s) 960
BseDI CCNNGG 2 cut(s) 899, 1105
BseGI GGATG 4 cut(s) 30, 271, 741, 1711
BseMI GCAATG 2 cut(s) 1378, 1397
BseMII CTCAG 4 cut(s) 76, 744, 933, 1469
BseNI ACTGG 5 cut(s) 288, 580, 707, 872, 1514
BseSI GKGCMC 1 cut(s) 429
BseXI GCAGC 1 cut(s) 100
BsgI GTGCAG 1 cut(s) 1203
Bsh1236I CGCG 1 cut(s) 675
BshFI GGCC 4 cut(s) 75, 458, 597, 933
BshNI GGYRCC 1 cut(s) 424
BshVI ATCGAT 1 cut(s) 960
BsiHKAI GWGCWC 1 cut(s) 1521
BsiSI CCGG 1 cut(s) 1064
BslFI GGGAC 1 cut(s) 617
BsmAI GTCTC 9 cut(s) 910, 1353, 1427, 1474, 1479, 1555, 1562, 1642, 1763
BsmFI GGGAC 1 cut(s) 617
BsmI GAATGC 1 cut(s) 1549
BsnI GGCC 4 cut(s) 75, 458, 597, 933
Bso31I GGTCTC 1 cut(s) 1353
Bsp1286I GDGCHC 3 cut(s) 429, 1470, 1521
Bsp13I TCCGGA 1 cut(s) 1063
Bsp1407I TGTACA 1 cut(s) 1081
Bsp143I GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
BspACI CCGC 7 cut(s) 34, 183, 455, 598, 675, 1395, 1498
BspANI GGCC 4 cut(s) 75, 458, 597, 933
BspCNI CTCAG 4 cut(s) 75, 743, 934, 1470
BspDI ATCGAT 1 cut(s) 960
BspEI TCCGGA 1 cut(s) 1063
BspFNI CGCG 1 cut(s) 675
BspLI GGNNCC 3 cut(s) 181, 426, 717
BspMI ACCTGC 1 cut(s) 1175
BspPI GGATC 5 cut(s) 332, 710, 723, 965, 1617
BspT107I GGYRCC 1 cut(s) 424
BspTI CTTAAG 2 cut(s) 745, 911
BspTNI GGTCTC 1 cut(s) 1353
BsrBI CCGCTC 1 cut(s) 1498
BsrDI GCAATG 2 cut(s) 1378, 1397
BsrGI TGTACA 1 cut(s) 1081
BsrI ACTGG 5 cut(s) 288, 580, 707, 872, 1514
BssECI CCNNGG 2 cut(s) 899, 1105
BssMI GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
BssT1I CCWWGG 1 cut(s) 1105
Bst2UI CCWGG 3 cut(s) 77, 901, 983
Bst4CI ACNGT 3 cut(s) 493, 1573, 1618
Bst6I CTCTTC 2 cut(s) 16, 1038
BstAFI CTTAAG 2 cut(s) 745, 911
BstAUI TGTACA 1 cut(s) 1081
BstC8I GCNNGC 1 cut(s) 1496
BstDEI CTNAG 9 cut(s) 62, 730, 761, 942, 965, 1300, 1408, 1415, 1478
BstF5I GGATG 4 cut(s) 30, 271, 741, 1711
BstFNI CGCG 1 cut(s) 675
BstHHI GCGC 1 cut(s) 307
BstKTI GATC 9 cut(s) 225, 340, 718, 752, 960, 964, 1263, 1414, 1612
BstMAI GTCTC 9 cut(s) 910, 1353, 1427, 1474, 1479, 1555, 1562, 1642, 1763
BstMBI GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
BstMWI GCNNNNNNNGC 2 cut(s) 684, 895
BstNI CCWGG 3 cut(s) 77, 901, 983
BstNSI RCATGY 3 cut(s) 305, 314, 350
BstSCI CCNGG 3 cut(s) 75, 899, 981
BstSFI CTRYAG 1 cut(s) 1384
BstSLI GKGCMC 1 cut(s) 429
BstUI CGCG 1 cut(s) 675
BstV1I GCAGC 1 cut(s) 100
BstV2I GAAGAC 1 cut(s) 1520
BstX2I RGATCY 4 cut(s) 337, 715, 749, 1411
BstXI CCANNNNNNTGG 1 cut(s) 982
BstYI RGATCY 4 cut(s) 337, 715, 749, 1411
Bsu15I ATCGAT 1 cut(s) 960
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 4 cut(s) 75, 458, 597, 933
BsuTUI ATCGAT 1 cut(s) 960
BtsCI GGATG 4 cut(s) 30, 271, 741, 1711
BtsIMutI CAGTG 2 cut(s) 1521, 1590
BveI ACCTGC 1 cut(s) 1175
Cac8I GCNNGC 1 cut(s) 1496
CaiI CAGNNNCTG 1 cut(s) 1622
CfoI GCGC 1 cut(s) 307
Cfr13I GGNCC 2 cut(s) 179, 1641
ClaI ATCGAT 1 cut(s) 960
Csp6I GTAC 4 cut(s) 350, 671, 1082, 1266
CviQI GTAC 4 cut(s) 350, 671, 1082, 1266
DdeI CTNAG 9 cut(s) 62, 730, 761, 942, 965, 1300, 1408, 1415, 1478
DpnI GATC 9 cut(s) 224, 339, 717, 751, 959, 963, 1262, 1413, 1611
DpnII GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
DraIII CACNNNGTG 1 cut(s) 258
EaeI YGGCCR 1 cut(s) 456
Eam1104I CTCTTC 2 cut(s) 16, 1038
EarI CTCTTC 2 cut(s) 16, 1038
EciI GGCGGA 1 cut(s) 23
Eco130I CCWWGG 1 cut(s) 1105
Eco24I GRGCYC 1 cut(s) 1470
Eco31I GGTCTC 1 cut(s) 1353
Eco47I GGWCC 2 cut(s) 179, 1641
Eco57I CTGAAG 4 cut(s) 741, 1008, 1188, 1702
EcoRI GAATTC 1 cut(s) 1295
EcoRII CCWGG 3 cut(s) 75, 899, 981
EcoT14I CCWWGG 1 cut(s) 1105
EcoT22I ATGCAT 1 cut(s) 741
EcoT38I GRGCYC 1 cut(s) 1470
ErhI CCWWGG 1 cut(s) 1105
FaqI GGGAC 1 cut(s) 617
FauI CCCGC 2 cut(s) 190, 1402
FauNDI CATATG 1 cut(s) 894
FbaI TGATCA 1 cut(s) 222
Fnu4HI GCNGC 5 cut(s) 114, 456, 598, 676, 1499
FokI GGATG 4 cut(s) 17, 278, 748, 1718
FriOI GRGCYC 1 cut(s) 1470
Fsp4HI GCNGC 5 cut(s) 114, 456, 598, 676, 1499
FspBI CTAG 2 cut(s) 794, 1106
FspI TGCGCA 1 cut(s) 306
GlaI GCGC 1 cut(s) 306
GluI GCNGC 5 cut(s) 114, 456, 598, 676, 1499
GsuI CTGGAG 1 cut(s) 922
HaeIII GGCC 4 cut(s) 75, 458, 597, 933
HapII CCGG 1 cut(s) 1064
HhaI GCGC 1 cut(s) 307
Hin6I GCGC 1 cut(s) 305
HinP1I GCGC 1 cut(s) 305
HincII GTYRAC 1 cut(s) 700
HindII GTYRAC 1 cut(s) 700
HindIII AAGCTT 2 cut(s) 441, 723
HinfI GANTC 8 cut(s) 206, 476, 503, 550, 557, 937, 1192, 1372
HpaI GTTAAC 1 cut(s) 700
HpaII CCGG 1 cut(s) 1064
Hpy166II GTNNAC 6 cut(s) 700, 1015, 1082, 1084, 1153, 1221
Hpy188I TCNGA 7 cut(s) 71, 120, 508, 1207, 1239, 1479, 1721
Hpy8I GTNNAC 6 cut(s) 700, 1015, 1082, 1084, 1153, 1221
HpyAV CCTTC 6 cut(s) 400, 430, 587, 824, 1212, 1344
HpyCH4III ACNGT 3 cut(s) 493, 1573, 1618
HpyCH4IV ACGT 1 cut(s) 1815
HpyCH4V TGCA 9 cut(s) 380, 739, 1184, 1319, 1402, 1547, 1557, 1688, 1712
HpyF10VI GCNNNNNNNGC 2 cut(s) 684, 895
HpyF3I CTNAG 9 cut(s) 62, 730, 761, 942, 965, 1300, 1408, 1415, 1478
HpySE526I ACGT 1 cut(s) 1815
HspAI GCGC 1 cut(s) 305
Kpn2I TCCGGA 1 cut(s) 1063
Ksp22I TGATCA 1 cut(s) 222
KspAI GTTAAC 1 cut(s) 700
Kzo9I GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
LmnI GCTCC 4 cut(s) 903, 1259, 1524, 1692
Lsp1109I GCAGC 1 cut(s) 100
LweI GCATC 2 cut(s) 726, 1699
MaeI CTAG 2 cut(s) 794, 1106
MaeII ACGT 1 cut(s) 1815
MaeIII GTNAC 2 cut(s) 836, 968
MalI GATC 9 cut(s) 224, 339, 717, 751, 959, 963, 1262, 1413, 1611
MbiI CCGCTC 1 cut(s) 1498
MboI GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
MflI RGATCY 4 cut(s) 337, 715, 749, 1411
MhlI GDGCHC 3 cut(s) 429, 1470, 1521
MmeI TCCRAC 3 cut(s) 157, 693, 973
Mph1103I ATGCAT 1 cut(s) 741
MroI TCCGGA 1 cut(s) 1063
MroXI GAANNNNTTC 1 cut(s) 642
MslI CAYNNNNRTG 1 cut(s) 108
MspCI CTTAAG 2 cut(s) 745, 911
MspI CCGG 1 cut(s) 1064
MspR9I CCNGG 3 cut(s) 77, 901, 983
Mva1269I GAATGC 1 cut(s) 1549
MvaI CCWGG 3 cut(s) 77, 901, 983
MvnI CGCG 1 cut(s) 675
MwoI GCNNNNNNNGC 2 cut(s) 684, 895
NdeI CATATG 1 cut(s) 894
NdeII GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
NlaIV GGNNCC 3 cut(s) 181, 426, 717
NsbI TGCGCA 1 cut(s) 306
NsiI ATGCAT 1 cut(s) 741
NspI RCATGY 3 cut(s) 305, 314, 350
PciI ACATGT 2 cut(s) 310, 346
PctI GAATGC 1 cut(s) 1549
PdmI GAANNNNTTC 1 cut(s) 642
PfeI GAWTC 8 cut(s) 206, 476, 503, 550, 557, 937, 1192, 1372
PflFI GACNNNGTC 2 cut(s) 629, 1573
PkrI GCNGC 5 cut(s) 115, 457, 599, 677, 1500
PscI ACATGT 2 cut(s) 310, 346
PsiI TTATAA 1 cut(s) 372
Psp6I CCWGG 3 cut(s) 75, 899, 981
PspGI CCWGG 3 cut(s) 75, 899, 981
PspN4I GGNNCC 3 cut(s) 181, 426, 717
PspPI GGNCC 2 cut(s) 179, 1641
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PstNI CAGNNNCTG 1 cut(s) 1622
PsuI RGATCY 4 cut(s) 337, 715, 749, 1411
PsyI GACNNNGTC 2 cut(s) 629, 1573
RsaI GTAC 4 cut(s) 351, 672, 1083, 1267
RsaNI GTAC 4 cut(s) 350, 671, 1082, 1266
RseI CAYNNNNRTG 1 cut(s) 108
SatI GCNGC 5 cut(s) 114, 456, 598, 676, 1499
Sau3AI GATC 9 cut(s) 222, 337, 715, 749, 957, 961, 1260, 1411, 1609
Sau96I GGNCC 2 cut(s) 179, 1641
ScaI AGTACT 1 cut(s) 1267
ScrFI CCNGG 3 cut(s) 77, 901, 983
SduI GDGCHC 3 cut(s) 429, 1470, 1521
SfaNI GCATC 2 cut(s) 726, 1699
SfcI CTRYAG 1 cut(s) 1384
SinI GGWCC 2 cut(s) 179, 1641
SmiMI CAYNNNNRTG 1 cut(s) 108
SmlI CTYRAG 5 cut(s) 158, 745, 911, 1469, 1565
SmoI CTYRAG 5 cut(s) 158, 745, 911, 1469, 1565
SsiI CCGC 7 cut(s) 34, 183, 455, 598, 675, 1395, 1498
SspMI CTAG 2 cut(s) 794, 1106
StyD4I CCNGG 3 cut(s) 75, 899, 981
StyI CCWWGG 1 cut(s) 1105
TaaI ACNGT 3 cut(s) 493, 1573, 1618
TaiI ACGT 1 cut(s) 1818
TaqI TCGA 1 cut(s) 960
TaqII GACCGA 1 cut(s) 1658
TatI WGTACW 2 cut(s) 1081, 1265
TauI GCSGC 4 cut(s) 458, 600, 678, 1501
TfiI GAWTC 8 cut(s) 206, 476, 503, 550, 557, 937, 1192, 1372
TscAI CASTG 2 cut(s) 1521, 1590
TseI GCWGC 1 cut(s) 113
TspDTI ATGAA 7 cut(s) 98, 282, 408, 881, 992, 1326, 1367
TspGWI ACGGA 2 cut(s) 208, 412
TspRI CASTG 2 cut(s) 1521, 1590
Tth111I GACNNNGTC 2 cut(s) 629, 1573
Vha464I CTTAAG 2 cut(s) 745, 911
VpaK11BI GGWCC 2 cut(s) 179, 1641
XapI RAATTY 4 cut(s) 609, 1048, 1240, 1295
XbaI TCTAGA 1 cut(s) 793
XceI RCATGY 3 cut(s) 305, 314, 350
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XmaJI CCTAGG 1 cut(s) 1105
XmnI GAANNNNTTC 1 cut(s) 642
XspI CTAG 2 cut(s) 794, 1106
ZrmI AGTACT 1 cut(s) 1267
Zsp2I ATGCAT 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.