MD16G1140700.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
10816455 .. 10821021
4567 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1140700.v1.1.491

Sequence Viewer

Length: 3057 bp
ATGGAGTTCATTGGGTTCTTTCAAGTTTTCATCATCGTCACCGCCATCATTACTCTGTTGTACACGTGCTTCAGATCATTAAAATTTTCTTGTTGGCCTTTTTATACTTCTTTTTCTTCTTCTGCGGACGACGACGATGATGATATCCCAGCCCCTCGAGAAAAGTATGATGGTGATGATATCCCACCCCCAAAGTATGATGTGTTTATTAGTTTCAGAGGTGAGGACACCCGCACTACTATTACTAGCCATCTTCACCGTGCCTTACTCCAGAAGAAAATTGAAACCTACATAGATAACAGACTTGTGAGCGGGGGTGAAATTGCACCTGCCCTTCTAGAAGCAATCGAGAAATCTACGCTTTCCTTGGTCATTTTCTCACAAAACTATGCATCTTCCACCTGGTGTTTGGATGAACTAGCACATATACTACACTGCAGGGAAAAATATGGCCAGTTGGTTATACCTATTTTTTACGGCACCGATCCATCAACGGTACGAAAACAAAAGGGGAGTTATGAAGTTGCATTTGCTCAACTTGAAAAACGCTTCAAGGGCAATATCGGCAAGGTGAACGTGTGGAGGGATGCTTTGACGACTGCAGCTAATCTATCTGGCTTCTCAAACAAAACAGGGACGGAGGCCGATTTAGTTACGGAAGTTGTAAACGAAATTTGGAGCCAGTTGAATAGAAAATCGTCAAGTGTTTTAAAGGGCCTTGTTGGAATGGAAAGACGCATTGAACAAATCGAGTCATCATTATGCATAGATTCACTTGACGTATACGGTGTAGGTATTTGGGGCATGGGTGGCATTGGCAAGACCACCCTTGCTGATGCTGTATTTCATCGACTCTCTTCTAAATTTGAAGCTTCTTGTTTTCTTGGAAATGTTAGGGAGAAATCAGCAAAAGAAGATGGACTAGTTCGCCTGCGAAACACACTTCTTTGTGAGATATTAAAGGAAAATGATCTAAACATCGGCACTCCGACTATAGGATTAGATCATGTTAGAAAGAGGATGCGAGGTACGAAGGTCCTCATTGTTCTTGATGATGTAAATGATTCAAACCAAATAAATTTTCTTGCTGGAGTTCCTGACCAGTTCGGCCCCGGAAGTAGAATAATTATAACAACTAGAGATAAGAGCGTACTTCAGAAAAGTGTTGAACAGAATAAGATATACGAGGTTCAGGAATTAAATTCTGATGAAGCTTTTCAACTTCTTCATTCGAGTGCTTTTGGAAATAACATTTCTAGAGTCGATTGTGCAGAGTTGTCAAAAATTGTGGTAGATTATTGTGGAGGGATTCCATTAGCTCTTCAAAGTTTGGGTTCCTCATTCCTTCACTGTGAGAGCAAAGAAGATTGGCTGGATGAATGGAAAGAATTTCCGAGAGAAAAGATCTGGGAAGTGTTGAGATCAAGTTATGATGGATTAAAAGAAATTGAGAAGGAGATATTTCTTGATATAGCATGTTTTTATCAAGGGAAAGATGTGTACATTGTAAAAGAACTGCTAGATATACTTGGCTTTCGTGCTTCGGTAATTAATGTTCTGATTGATAAGTCTCTCATATCAATTTCAACAAGTAACAGCCTGCAGATGCATAATTTGTTACAAGAAATGGGTAGGGCAATTGTTCACAAACAATGTAATGAAGAGCCCGAAAAATGCAGTAGGTTATTTGTTGATGAGGATTTCAATCGGGAATTGAAAACTAATACGGGAAGTGCAATGCTACAAGCCATTTTCTTTAACAGGTCTGCGAATCATGCAGACTTTGCAAAGAAGTATGATCTAAGGTTGCTATACGTTTATAACTCCAGCCGTAACAAGTACTGCAAAGTAAAAGTTTCTCTTCCCGATTCTCTAGCCTATCTTGACTGGGAGGGATACCCTTTCAACTCTTTGCCATCAAAACTTAGTCCGGAAAATCTTGTTGAGATTCAAATGCGGAACAGCCAAGTTGAGCAACTTGAAGGCCAGAATCTCATAAACTTAAGAGTGATGGATCTTGGTCTGTCCAAGCATCTGATGGAAGTTCCAGATCTCTCCCAAAGTCCAAACATCGAGCATATAAATTTGAGTGGAACCGCAATTAAAAGCGTACCTGCAAGCATTGGTAATTTGAAATCTCTTGAGGAACTTGATCTGAGTGGAACTGCGATCACGTGCCTACCTGCAAGCATCAAAGAAGCTTCTCGGCTGATTTGTCTGCGGCTAACCAATTGCAGGAGCCTTGAATCTTTACCAGAGCTCCCAGGGGTACGTTGGCTTCAAGCACATGGCTGCACATCACTCAAGAAAGTGTTGAGCTCAAAGACTGCCCTTACATTAGGTTGGGATGAATATAAAAATTCTCAAGGACTTCAAGAGCAACTTACATTTTCAAATTGCATAGGAATGGGATGGGATGCTTGGTGTGATATATTGACTGATTCGCAGATTAGAATTGTGCGAATGGCAATTGCATTGTCAAAGCACTTTAAACAAGAAGATATTGAAGTAGCATCTCATCTTGAATTTGAAGACGAAAGTAAAGAGTATGTTTTTAGATCTCCATTCTGCGTTGTATGTTCTGGAAATATAATTCCAAGATGGTTCCCGTATGAAGTTCATAAATCGGTACTACAGATCAAACTTGGTCCAAACTTCTTTAGCACTGATTTTTTGGGTTTCGCCTATTCGGTTGTTGTTGCATTCAAGAATTATAATGTTGGAGGGAGTTTGAGGCTTGGATGTAAAATCAATTTCAAAGGCCGTGGTGATCATTGTATCTATCATCGGAGTTGCATGGTTGCCGAATATGGAGAAATCAATGAGTGCAAGTTTGATGAGCCTCACTCGTTCGTCTGGTTTAGCACCCTTGACCATGTAAAGCAAGGAAGCTACAATGGCGTCACCGAGGCCATATTTGACTTCTACCCAATAGTAGATGATCTTCCTCATGGCGGAGCCATTGATTGTTCCAAGATTGAGGTGACAATGTGTGGGGTCTACCCAATGTATGCTAGATATATGTGGTTTTCGTACAGCATGAATCGGCAGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1019

Amino Acids

115.07

Weight (kDa)

5.63

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 65 - 241 1.6e-51 TIR domain
TIR_2 PF13676 68 - 163 1.1e-13 TIR domain
NB-ARC PF00931 244 - 417 1.6e-22 NB-ARC domain
WHD_ROQ1 PF23282 483 - 551 2.2e-17 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 666 - 753 6.8e-12 Leucine-rich repeat region
C-JID PF20160 860 - 949 3.3e-08 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1130, 1821, 2715
AarI CACCTGC 1 cut(s) 337
Acc36I ACCTGC 3 cut(s) 337, 2122, 2191
AccB1I GGYRCC 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 312
AccI GTMKAC 2 cut(s) 783, 3000
AccIII TCCGGA 1 cut(s) 1930
AciI CCGC 8 cut(s) 42, 125, 232, 312, 1957, 2097, 2221, 2955
AclWI GGATC 2 cut(s) 479, 2022
AcoI YGGCCR 1 cut(s) 451
AcsI RAATTY 9 cut(s) 83, 672, 863, 1078, 1201, 1388, 2083, 2359, 2525
AcuI CTGAAG 2 cut(s) 55, 1139
AcvI CACGTG 2 cut(s) 66, 2175
AcyI GRCGYC 1 cut(s) 2901
AdeI CACNNNGTG 1 cut(s) 405
AfiI CCNNNNNNNGG 3 cut(s) 995, 2235, 2954
AflII CTTAAG 1 cut(s) 2002
AflIII ACRYGT 2 cut(s) 63, 576
AhlI ACTAGT 1 cut(s) 922
AjnI CCWGG 2 cut(s) 401, 2263
AjuI GAANNNNNNNTTGG 2 cut(s) 1065, 1097
AluBI AGCT 8 cut(s) 605, 872, 1214, 1319, 2201, 2260, 2319, 2892
AluI AGCT 8 cut(s) 605, 872, 1214, 1319, 2201, 2260, 2319, 2892
Alw21I GWGCWC 2 cut(s) 2262, 2321
Alw26I GTCTC 1 cut(s) 1575
AlwI GGATC 2 cut(s) 479, 2022
Ama87I CYCGRG 1 cut(s) 156
Aor13HI TCCGGA 1 cut(s) 1930
AoxI GGCC 8 cut(s) 95, 451, 642, 715, 1108, 1984, 2761, 2910
ApeKI GCWGC 2 cut(s) 602, 2292
ApoI RAATTY 9 cut(s) 83, 672, 863, 1078, 1201, 1388, 2083, 2359, 2525
AseI ATTAAT 1 cut(s) 1551
Asp700I GAANNNNTTC 1 cut(s) 1215
AspS9I GGNCC 4 cut(s) 715, 1036, 1109, 2648
AsuC2I CCSGG 1 cut(s) 1113
AsuHPI GGTGA 9 cut(s) 31, 185, 233, 248, 329, 583, 2780, 2896, 2995
AvaI CYCGRG 1 cut(s) 156
AvaII GGWCC 2 cut(s) 1036, 2648
BaeI ACNNNNGTAYC 2 cut(s) 1020, 1053
BalI TGGCCA 1 cut(s) 453
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 3 cut(s) 1668, 2262, 2321
BarI GAAGNNNNNNTAC 6 cut(s) 53, 85, 2262, 2294, 2928, 2960
BbrPI CACGTG 2 cut(s) 66, 2175
BbsI GAAGAC 1 cut(s) 2538
Bbv12I GWGCWC 2 cut(s) 2262, 2321
BbvI GCAGC 2 cut(s) 614, 2279
BceAI ACGGC 3 cut(s) 493, 1815, 2748
BciT130I CCWGG 2 cut(s) 403, 2265
BciVI GTATCC 1 cut(s) 1889
BclI TGATCA 1 cut(s) 2770
BcnI CCSGG 1 cut(s) 1113
BcoDI GTCTC 1 cut(s) 1575
BcuI ACTAGT 1 cut(s) 922
BfaI CTAG 9 cut(s) 246, 338, 419, 923, 1137, 1257, 1520, 1874, 3015
BfmI CTRYAG 5 cut(s) 436, 600, 993, 1601, 2633
BfrI CTTAAG 1 cut(s) 2002
BfuAI ACCTGC 3 cut(s) 337, 2122, 2191
BfuI GTATCC 1 cut(s) 1889
BglII AGATCT 3 cut(s) 1404, 2050, 2558
BisI GCNGC 3 cut(s) 603, 2222, 2293
BlsI GCNGC 3 cut(s) 604, 2223, 2294
BmcAI AGTACT 1 cut(s) 1841
Bme1390I CCNGG 3 cut(s) 403, 1113, 2265
Bme18I GGWCC 2 cut(s) 1036, 2648
BmeT110I CYCGRG 1 cut(s) 156
BmgT120I GGNCC 4 cut(s) 715, 1036, 1109, 2648
BmiI GGNNCC 8 cut(s) 481, 680, 1111, 1336, 2095, 2240, 2606, 2959
BmrFI CCNGG 3 cut(s) 403, 1113, 2265
BmrI ACTGGG 1 cut(s) 1897
BmsI GCATC 9 cut(s) 401, 577, 826, 1011, 1596, 2041, 2199, 2407, 2522
BmuI ACTGGG 1 cut(s) 1897
BpiI GAAGAC 1 cut(s) 2538
BplI GAGNNNNNCTC 2 cut(s) 2831, 2863
BpmI CTGGAG 3 cut(s) 254, 1110, 1810
BpuEI CTTGAG 3 cut(s) 2162, 2288, 2349
BpuMI CCSGG 1 cut(s) 1113
BsaAI YACGTR 2 cut(s) 66, 2175
BsaBI GATNNNNATC 1 cut(s) 1704
BsaHI GRCGYC 1 cut(s) 2901
BsaJI CCNNGG 6 cut(s) 366, 1111, 2263, 2264, 2764, 2907
BsaWI WCCGGW 1 cut(s) 1930
BsaXI ACNNNNNCTCC 2 cut(s) 2244, 2274
Bsc4I CCNNNNNNNGG 3 cut(s) 995, 2235, 2954
Bse1I ACTGG 4 cut(s) 454, 682, 1102, 1892
Bse3DI GCAATG 1 cut(s) 1743
Bse8I GATNNNNATC 1 cut(s) 1704
BseAI TCCGGA 1 cut(s) 1930
BseBI CCWGG 2 cut(s) 403, 2265
BseDI CCNNGG 6 cut(s) 366, 1111, 2263, 2264, 2764, 2907
BseGI GGATG 8 cut(s) 418, 592, 1026, 1381, 2353, 2417, 2422, 2747
BseJI GATNNNNATC 1 cut(s) 1704
BseLI CCNNNNNNNGG 3 cut(s) 995, 2235, 2954
BseMI GCAATG 1 cut(s) 1743
BseMII CTCAG 1 cut(s) 2147
BseNI ACTGG 4 cut(s) 454, 682, 1102, 1892
BseXI GCAGC 2 cut(s) 614, 2279
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 2 cut(s) 1290, 2278
BshFI GGCC 8 cut(s) 97, 453, 644, 717, 1110, 1986, 2763, 2912
BshNI GGYRCC 1 cut(s) 479
BsiHKAI GWGCWC 2 cut(s) 2262, 2321
BsiHKCI CYCGRG 1 cut(s) 156
BsiSI CCGG 2 cut(s) 1113, 1931
BslFI GGGAC 1 cut(s) 649
BslI CCNNNNNNNGG 3 cut(s) 995, 2235, 2954
BsmAI GTCTC 1 cut(s) 1575
BsmFI GGGAC 1 cut(s) 649
BsmI GAATGC 1 cut(s) 2702
BsnI GGCC 8 cut(s) 97, 453, 644, 717, 1110, 1986, 2763, 2912
BsoBI CYCGRG 1 cut(s) 156
Bsp1286I GDGCHC 3 cut(s) 1668, 2262, 2321
Bsp13I TCCGGA 1 cut(s) 1930
Bsp1407I TGTACA 2 cut(s) 60, 1500
BspACI CCGC 8 cut(s) 42, 125, 232, 312, 1957, 2097, 2221, 2955
BspANI GGCC 8 cut(s) 97, 453, 644, 717, 1110, 1986, 2763, 2912
BspCNI CTCAG 1 cut(s) 2148
BspEI TCCGGA 1 cut(s) 1930
BspLI GGNNCC 8 cut(s) 481, 680, 1111, 1336, 2095, 2240, 2606, 2959
BspMAI CTGCAG 3 cut(s) 440, 604, 1605
BspMI ACCTGC 3 cut(s) 337, 2122, 2191
BspPI GGATC 2 cut(s) 479, 2022
BspQI GCTCTTC 2 cut(s) 1326, 1656
BspT107I GGYRCC 1 cut(s) 479
BspTI CTTAAG 1 cut(s) 2002
BsrBI CCGCTC 1 cut(s) 312
BsrDI GCAATG 1 cut(s) 1743
BsrGI TGTACA 2 cut(s) 60, 1500
BsrI ACTGG 4 cut(s) 454, 682, 1102, 1892
BssECI CCNNGG 6 cut(s) 366, 1111, 2263, 2264, 2764, 2907
BssNAI GTATAC 1 cut(s) 784
BssNI GRCGYC 1 cut(s) 2901
BssT1I CCWWGG 1 cut(s) 366
Bst1107I GTATAC 1 cut(s) 784
Bst2UI CCWGG 2 cut(s) 403, 2265
Bst4CI ACNGT 4 cut(s) 260, 496, 788, 1352
Bst6I CTCTTC 4 cut(s) 862, 1326, 1656, 1866
BstACI GRCGYC 1 cut(s) 2901
BstAFI CTTAAG 1 cut(s) 2002
BstAPI GCANNNNNTGC 1 cut(s) 1784
BstAUI TGTACA 2 cut(s) 60, 1500
BstBAI YACGTR 2 cut(s) 66, 2175
BstC8I GCNNGC 4 cut(s) 932, 1601, 2119, 2188
BstDEI CTNAG 3 cut(s) 1802, 1925, 2156
BstDSI CCRYGG 1 cut(s) 2764
BstF5I GGATG 8 cut(s) 418, 592, 1026, 1381, 2353, 2417, 2422, 2747
BstMAI GTCTC 1 cut(s) 1575
BstMWI GCNNNNNNNGC 6 cut(s) 555, 564, 810, 1775, 1784, 2898
BstNI CCWGG 2 cut(s) 403, 2265
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 3 cut(s) 401, 1111, 2263
BstSFI CTRYAG 5 cut(s) 436, 600, 993, 1601, 2633
BstV1I GCAGC 2 cut(s) 614, 2279
BstV2I GAAGAC 1 cut(s) 2538
BstX2I RGATCY 4 cut(s) 1404, 2014, 2050, 2558
BstYI RGATCY 4 cut(s) 1404, 2014, 2050, 2558
BstZ17I GTATAC 1 cut(s) 784
BsuI GTATCC 1 cut(s) 1889
BsuRI GGCC 8 cut(s) 97, 453, 644, 717, 1110, 1986, 2763, 2912
BtgI CCRYGG 1 cut(s) 2764
BtsCI GGATG 8 cut(s) 418, 592, 1026, 1381, 2353, 2417, 2422, 2747
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 3 cut(s) 433, 1348, 2664
BveI ACCTGC 3 cut(s) 337, 2122, 2191
Cac8I GCNNGC 4 cut(s) 932, 1601, 2119, 2188
Cfr13I GGNCC 4 cut(s) 715, 1036, 1109, 2648
CseI GACGC 2 cut(s) 744, 2890
CsiI ACCWGGT 1 cut(s) 401
CspCI CAANNNNNGTGG 4 cut(s) 1269, 1304, 2746, 2781
CviAII CATG 9 cut(s) 805, 1007, 1476, 1775, 2288, 2797, 2876, 2951, 3040
DdeI CTNAG 3 cut(s) 1802, 1925, 2156
DraI TTTAAA 2 cut(s) 711, 2491
DraIII CACNNNGTG 1 cut(s) 405
EaeI YGGCCR 1 cut(s) 451
Eam1104I CTCTTC 4 cut(s) 862, 1326, 1656, 1866
EarI CTCTTC 4 cut(s) 862, 1326, 1656, 1866
EciI GGCGGA 1 cut(s) 2970
Ecl136II GAGCTC 2 cut(s) 2260, 2319
Eco130I CCWWGG 1 cut(s) 366
Eco24I GRGCYC 3 cut(s) 1668, 2262, 2321
Eco32I GATATC 2 cut(s) 145, 181
Eco47I GGWCC 2 cut(s) 1036, 2648
Eco53kI GAGCTC 2 cut(s) 2260, 2319
Eco57I CTGAAG 2 cut(s) 55, 1139
Eco72I CACGTG 2 cut(s) 66, 2175
Eco88I CYCGRG 1 cut(s) 156
EcoICRI GAGCTC 2 cut(s) 2260, 2319
EcoO109I RGGNCCY 2 cut(s) 715, 1036
EcoRII CCWGG 2 cut(s) 401, 2263
EcoRV GATATC 2 cut(s) 145, 181
EcoT14I CCWWGG 1 cut(s) 366
EcoT22I ATGCAT 3 cut(s) 394, 767, 1611
EcoT38I GRGCYC 3 cut(s) 1668, 2262, 2321
ErhI CCWWGG 1 cut(s) 366
FaeI CATG 9 cut(s) 808, 1010, 1479, 1778, 2291, 2800, 2879, 2954, 3043
FalI AAGNNNNNCTT 4 cut(s) 1845, 1877, 2367, 2399
FaqI GGGAC 1 cut(s) 649
FatI CATG 9 cut(s) 804, 1006, 1475, 1774, 2287, 2796, 2875, 2950, 3039
FauI CCCGC 2 cut(s) 239, 305
FbaI TGATCA 1 cut(s) 2770
FblI GTMKAC 2 cut(s) 783, 3000
Fnu4HI GCNGC 3 cut(s) 603, 2222, 2293
FokI GGATG 8 cut(s) 425, 599, 1033, 1388, 2360, 2424, 2429, 2754
FriOI GRGCYC 3 cut(s) 1668, 2262, 2321
Fsp4HI GCNGC 3 cut(s) 603, 2222, 2293
FspBI CTAG 9 cut(s) 246, 338, 419, 923, 1137, 1257, 1520, 1874, 3015
GluI GCNGC 3 cut(s) 603, 2222, 2293
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 3 cut(s) 254, 1110, 1810
HaeIII GGCC 8 cut(s) 97, 453, 644, 717, 1110, 1986, 2763, 2912
HapII CCGG 2 cut(s) 1113, 1931
HgaI GACGC 2 cut(s) 744, 2890
Hin1I GRCGYC 1 cut(s) 2901
Hin1II CATG 9 cut(s) 808, 1010, 1479, 1778, 2291, 2800, 2879, 2954, 3043
HindIII AAGCTT 3 cut(s) 870, 1212, 2199
HpaII CCGG 2 cut(s) 1113, 1931
HphI GGTGA 9 cut(s) 31, 185, 233, 248, 329, 583, 2780, 2896, 2995
Hpy166II GTNNAC 7 cut(s) 63, 574, 667, 784, 1501, 1645, 3001
Hpy8I GTNNAC 7 cut(s) 63, 574, 667, 784, 1501, 1645, 3001
Hpy99I CGWCG 2 cut(s) 134, 137
HpyAV CCTTC 5 cut(s) 344, 1027, 1355, 1447, 1976
HpyCH4III ACNGT 4 cut(s) 260, 496, 788, 1352
HpyCH4IV ACGT 6 cut(s) 65, 576, 780, 1815, 2174, 2272
HpyF10VI GCNNNNNNNGC 6 cut(s) 555, 564, 810, 1775, 1784, 2898
HpyF3I CTNAG 3 cut(s) 1802, 1925, 2156
HpySE526I ACGT 6 cut(s) 65, 576, 780, 1815, 2174, 2272
Hsp92I GRCGYC 1 cut(s) 2901
Hsp92II CATG 9 cut(s) 808, 1010, 1479, 1778, 2291, 2800, 2879, 2954, 3043
Kpn2I TCCGGA 1 cut(s) 1930
Ksp22I TGATCA 1 cut(s) 2770
LguI GCTCTTC 2 cut(s) 1326, 1656
LmnI GCTCC 4 cut(s) 678, 2238, 2265, 2957
Lsp1109I GCAGC 2 cut(s) 614, 2279
LweI GCATC 9 cut(s) 401, 577, 826, 1011, 1596, 2041, 2199, 2407, 2522
MabI ACCWGGT 1 cut(s) 401
MaeI CTAG 9 cut(s) 246, 338, 419, 923, 1137, 1257, 1520, 1874, 3015
MaeII ACGT 6 cut(s) 65, 576, 780, 1815, 2174, 2272
MaeIII GTNAC 7 cut(s) 37, 652, 1592, 1617, 1832, 2902, 2983
MbiI CCGCTC 1 cut(s) 312
MfeI CAATTG 3 cut(s) 1638, 2230, 2469
MflI RGATCY 4 cut(s) 1404, 2014, 2050, 2558
MhlI GDGCHC 3 cut(s) 1668, 2262, 2321
MlsI TGGCCA 1 cut(s) 453
MluNI TGGCCA 1 cut(s) 453
MlyI GAGTC 3 cut(s) 761, 846, 1269
MmeI TCCRAC 3 cut(s) 703, 1013, 2701
Mox20I TGGCCA 1 cut(s) 453
Mph1103I ATGCAT 3 cut(s) 394, 767, 1611
MroI TCCGGA 1 cut(s) 1930
MroXI GAANNNNTTC 1 cut(s) 1215
MscI TGGCCA 1 cut(s) 453
MslI CAYNNNNRTG 3 cut(s) 760, 1233, 2405
Msp20I TGGCCA 1 cut(s) 453
MspCI CTTAAG 1 cut(s) 2002
MspI CCGG 2 cut(s) 1113, 1931
MspR9I CCNGG 3 cut(s) 403, 1113, 2265
MunI CAATTG 3 cut(s) 1638, 2230, 2469
Mva1269I GAATGC 1 cut(s) 2702
MvaI CCWGG 2 cut(s) 403, 2265
MwoI GCNNNNNNNGC 6 cut(s) 555, 564, 810, 1775, 1784, 2898
NciI CCSGG 1 cut(s) 1113
NlaIII CATG 9 cut(s) 808, 1010, 1479, 1778, 2291, 2800, 2879, 2954, 3043
NlaIV GGNNCC 8 cut(s) 481, 680, 1111, 1336, 2095, 2240, 2606, 2959
NmeAIII GCCGAG 1 cut(s) 2185
NmuCI GTSAC 3 cut(s) 37, 2902, 2983
NsiI ATGCAT 3 cut(s) 394, 767, 1611
NspI RCATGY 1 cut(s) 1479
PaeR7I CTCGAG 1 cut(s) 156
PaqCI CACCTGC 1 cut(s) 337
PasI CCCWGGG 1 cut(s) 2264
PciSI GCTCTTC 2 cut(s) 1326, 1656
PctI GAATGC 1 cut(s) 2702
PdmI GAANNNNTTC 1 cut(s) 1215
PkrI GCNGC 3 cut(s) 604, 2223, 2294
PleI GAGTC 3 cut(s) 760, 846, 1268
PmaCI CACGTG 2 cut(s) 66, 2175
PmlI CACGTG 2 cut(s) 66, 2175
PpsI GAGTC 3 cut(s) 760, 846, 1268
Ppu21I YACGTR 2 cut(s) 66, 2175
PpuMI RGGWCCY 1 cut(s) 1036
PshBI ATTAAT 1 cut(s) 1551
PsiI TTATAA 3 cut(s) 1130, 1821, 2715
Psp124BI GAGCTC 2 cut(s) 2262, 2321
Psp5II RGGWCCY 1 cut(s) 1036
Psp6I CCWGG 2 cut(s) 401, 2263
PspCI CACGTG 2 cut(s) 66, 2175
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 2 cut(s) 401, 2263
PspN4I GGNNCC 8 cut(s) 481, 680, 1111, 1336, 2095, 2240, 2606, 2959
PspPI GGNCC 4 cut(s) 715, 1036, 1109, 2648
PspPPI RGGWCCY 1 cut(s) 1036
PsrI GAACNNNNNNTAC 2 cut(s) 1539, 1571
PstI CTGCAG 3 cut(s) 440, 604, 1605
PsuI RGATCY 4 cut(s) 1404, 2014, 2050, 2558
RseI CAYNNNNRTG 3 cut(s) 760, 1233, 2405
SacI GAGCTC 2 cut(s) 2262, 2321
SapI GCTCTTC 2 cut(s) 1326, 1656
SatI GCNGC 3 cut(s) 603, 2222, 2293
Sau96I GGNCC 4 cut(s) 715, 1036, 1109, 2648
ScaI AGTACT 1 cut(s) 1841
SchI GAGTC 3 cut(s) 761, 846, 1269
ScrFI CCNGG 3 cut(s) 403, 1113, 2265
SduI GDGCHC 3 cut(s) 1668, 2262, 2321
SexAI ACCWGGT 1 cut(s) 401
SfaNI GCATC 9 cut(s) 401, 577, 826, 1011, 1596, 2041, 2199, 2407, 2522
SfcI CTRYAG 5 cut(s) 436, 600, 993, 1601, 2633
Sfr274I CTCGAG 1 cut(s) 156
SinI GGWCC 2 cut(s) 1036, 2648
SlaI CTCGAG 1 cut(s) 156
SmiMI CAYNNNNRTG 3 cut(s) 760, 1233, 2405
SmlI CTYRAG 5 cut(s) 156, 2002, 2141, 2303, 2364
SmoI CTYRAG 5 cut(s) 156, 2002, 2141, 2303, 2364
SpeI ACTAGT 1 cut(s) 922
SsiI CCGC 8 cut(s) 42, 125, 232, 312, 1957, 2097, 2221, 2955
SspMI CTAG 9 cut(s) 246, 338, 419, 923, 1137, 1257, 1520, 1874, 3015
SstI GAGCTC 2 cut(s) 2262, 2321
StyD4I CCNGG 3 cut(s) 401, 1111, 2263
StyI CCWWGG 1 cut(s) 366
TaaI ACNGT 4 cut(s) 260, 496, 788, 1352
TaiI ACGT 6 cut(s) 68, 579, 783, 1818, 2177, 2275
TaqI TCGA 7 cut(s) 157, 348, 750, 850, 1232, 1263, 2073
TatI WGTACW 3 cut(s) 60, 1500, 1839
TauI GCSGC 1 cut(s) 2224
TscAI CASTG 3 cut(s) 440, 1355, 2671
TseFI GTSAC 3 cut(s) 37, 2902, 2983
TseI GCWGC 2 cut(s) 602, 2292
Tsp45I GTSAC 3 cut(s) 37, 2902, 2983
TspGWI ACGGA 2 cut(s) 653, 671
TspRI CASTG 3 cut(s) 440, 1355, 2671
Vha464I CTTAAG 1 cut(s) 2002
VpaK11BI GGWCC 2 cut(s) 1036, 2648
VspI ATTAAT 1 cut(s) 1551
XapI RAATTY 9 cut(s) 83, 672, 863, 1078, 1201, 1388, 2083, 2359, 2525
XbaI TCTAGA 2 cut(s) 337, 1256
XceI RCATGY 1 cut(s) 1479
XcmI CCANNNNNNNNNTGG 3 cut(s) 406, 2035, 2271
XhoI CTCGAG 1 cut(s) 156
XmiI GTMKAC 2 cut(s) 783, 3000
XmnI GAANNNNTTC 1 cut(s) 1215
XspI CTAG 9 cut(s) 246, 338, 419, 923, 1137, 1257, 1520, 1874, 3015
ZrmI AGTACT 1 cut(s) 1841
Zsp2I ATGCAT 3 cut(s) 394, 767, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.