RESISTANCE protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 18 - 193 | 1.3e-54 | TIR domain |
| TIR_2 | PF13676 | 21 - 117 | 3.3e-15 | TIR domain |
| NB-ARC | PF00931 | 213 - 369 | 1.1e-15 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 444 - 520 | 3.9e-17 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_14 | PF23598 | 728 - 851 | 2e-14 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 748 - 804 | 3.8e-06 | Leucine rich repeat |
| C-JID | PF20160 | 1047 - 1191 | 5.4e-12 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 866, 986, 3006 |
| AarI | CACCTGC | 1 cut(s) | 196 |
| Acc16I | TGCGCA | 2 cut(s) | 42, 282 |
| Acc36I | ACCTGC | 1 cut(s) | 196 |
| AccI | GTMKAC | 1 cut(s) | 2695 |
| AccII | CGCG | 2 cut(s) | 546, 1361 |
| AccIII | TCCGGA | 2 cut(s) | 2706, 3115 |
| AciI | CCGC | 9 cut(s) | 91, 120, 130, 1134, 1181, 1427, 2599, 3287, 3486 |
| AclI | AACGTT | 1 cut(s) | 406 |
| AclWI | GGATC | 6 cut(s) | 338, 842, 2979, 3364, 3377, 3496 |
| AcsI | RAATTY | 5 cut(s) | 1185, 1730, 2558, 3153, 3628 |
| AcuI | CTGAAG | 3 cut(s) | 1079, 3243, 3591 |
| AdeI | CACNNNGTG | 1 cut(s) | 3403 |
| AfaI | GTAC | 5 cut(s) | 56, 357, 1597, 3128, 3413 |
| AfeI | AGCGCT | 1 cut(s) | 1197 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 82, 367, 851, 889, 1155, 1783, 2793, 3427 |
| AflII | CTTAAG | 1 cut(s) | 2459 |
| AflIII | ACRYGT | 3 cut(s) | 352, 1718, 2508 |
| AjiI | CACGTC | 2 cut(s) | 1719, 2776 |
| AjnI | CCWGG | 4 cut(s) | 967, 1573, 1921, 2617 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 927, 959, 2577, 2609 |
| Alw21I | GWGCWC | 4 cut(s) | 426, 1238, 1800, 2214 |
| Alw26I | GTCTC | 8 cut(s) | 1464, 1933, 2185, 2381, 2432, 2630, 2688, 3469 |
| Alw44I | GTGCAC | 1 cut(s) | 1796 |
| AlwI | GGATC | 6 cut(s) | 338, 842, 2979, 3364, 3377, 3496 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2939 |
| Ama87I | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| Aor13HI | TCCGGA | 2 cut(s) | 2706, 3115 |
| Aor51HI | AGCGCT | 1 cut(s) | 1197 |
| AoxI | GGCC | 4 cut(s) | 487, 1762, 1853, 1954 |
| ApaLI | GTGCAC | 1 cut(s) | 1796 |
| ApeKI | GCWGC | 5 cut(s) | 380, 383, 1178, 2002, 2436 |
| ApoI | RAATTY | 5 cut(s) | 1185, 1730, 2558, 3153, 3628 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2406, 2438 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 633, 1092, 1647, 1824, 2103 |
| AspA2I | CCTAGG | 1 cut(s) | 1964 |
| AspLEI | GCGC | 5 cut(s) | 43, 283, 1198, 1584, 2862 |
| AspS9I | GGNCC | 6 cut(s) | 892, 965, 1762, 2232, 3435, 3575 |
| AsuC2I | CCSGG | 1 cut(s) | 1601 |
| AsuHPI | GGTGA | 7 cut(s) | 959, 1760, 3178, 3311, 3338, 3442, 3550 |
| AsuII | TTCGAA | 1 cut(s) | 3658 |
| AvaI | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| AvaII | GGWCC | 5 cut(s) | 892, 965, 2232, 3435, 3575 |
| AvrII | CCTAGG | 1 cut(s) | 1964 |
| BaeGI | GKGCMC | 1 cut(s) | 1800 |
| BamHI | GGATCC | 1 cut(s) | 3369 |
| BbsI | GAAGAC | 1 cut(s) | 2936 |
| Bbv12I | GWGCWC | 4 cut(s) | 426, 1238, 1800, 2214 |
| BbvI | GCAGC | 5 cut(s) | 370, 392, 1165, 2014, 2423 |
| BccI | CCATC | 5 cut(s) | 853, 1888, 2258, 2819, 3374 |
| BceAI | ACGGC | 1 cut(s) | 3498 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3471, 3488, 3505, 3522 |
| BciT130I | CCWGG | 4 cut(s) | 969, 1575, 1923, 2619 |
| BclI | TGATCA | 1 cut(s) | 949 |
| BcnI | CCSGG | 1 cut(s) | 1601 |
| BcoDI | GTCTC | 8 cut(s) | 1464, 1933, 2185, 2381, 2432, 2630, 2688, 3469 |
| BfaI | CTAG | 7 cut(s) | 461, 774, 932, 993, 1965, 2894, 3524 |
| BfmI | CTRYAG | 2 cut(s) | 849, 2205 |
| BfoI | RGCGCY | 2 cut(s) | 1199, 2863 |
| BfrI | CTTAAG | 1 cut(s) | 2459 |
| BfuAI | ACCTGC | 1 cut(s) | 196 |
| BglII | AGATCT | 1 cut(s) | 2020 |
| BisI | GCNGC | 6 cut(s) | 120, 381, 384, 1179, 2003, 2437 |
| BlnI | CCTAGG | 1 cut(s) | 1964 |
| BlpI | GCTNAGC | 1 cut(s) | 3244 |
| BlsI | GCNGC | 6 cut(s) | 121, 382, 385, 1180, 2004, 2438 |
| Bme1390I | CCNGG | 5 cut(s) | 969, 1575, 1601, 1923, 2619 |
| Bme18I | GGWCC | 5 cut(s) | 892, 965, 2232, 3435, 3575 |
| BmeT110I | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| BmgBI | CACGTC | 2 cut(s) | 1719, 2776 |
| BmgT120I | GGNCC | 6 cut(s) | 892, 965, 1762, 2232, 3435, 3575 |
| BmiI | GGNNCC | 5 cut(s) | 1213, 2234, 2517, 2785, 3371 |
| BmrFI | CCNGG | 5 cut(s) | 969, 1575, 1601, 1923, 2619 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1611 |
| BpiI | GAAGAC | 1 cut(s) | 2936 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2363, 2395, 3424, 3456 |
| BpmI | CTGGAG | 2 cut(s) | 1919, 2552 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1192 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3244 |
| Bpu14I | TTCGAA | 1 cut(s) | 3658 |
| BpuEI | CTTGAG | 3 cut(s) | 410, 538, 1686 |
| BpuMI | CCSGG | 1 cut(s) | 1601 |
| Bsa29I | ATCGAT | 2 cut(s) | 153, 1983 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1002, 1469, 3084, 3197 |
| BsaI | GGTCTC | 3 cut(s) | 2185, 2381, 2688 |
| BsaJI | CCNNGG | 7 cut(s) | 76, 1599, 1778, 1964, 2618, 2825, 3373 |
| BsaWI | WCCGGW | 3 cut(s) | 2706, 3115, 3617 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2061, 2091, 2688, 2718, 2865, 2895 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 82, 367, 851, 889, 1155, 1783, 2793, 3427 |
| Bse1I | ACTGG | 2 cut(s) | 105, 2903 |
| Bse3DI | GCAATG | 3 cut(s) | 1798, 2120, 3511 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1002, 1469, 3084, 3197 |
| BseAI | TCCGGA | 2 cut(s) | 2706, 3115 |
| BseBI | CCWGG | 4 cut(s) | 969, 1575, 1923, 2619 |
| BseCI | ATCGAT | 2 cut(s) | 153, 1983 |
| BseDI | CCNNGG | 7 cut(s) | 76, 1599, 1778, 1964, 2618, 2825, 3373 |
| BseJI | GATNNNNATC | 4 cut(s) | 1002, 1469, 3084, 3197 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 82, 367, 851, 889, 1155, 1783, 2793, 3427 |
| BseMI | GCAATG | 3 cut(s) | 1798, 2120, 3511 |
| BseMII | CTCAG | 9 cut(s) | 821, 1110, 1688, 1887, 1899, 1989, 2002, 2822, 3405 |
| BseNI | ACTGG | 2 cut(s) | 105, 2903 |
| BseRI | GAGGAG | 2 cut(s) | 186, 1689 |
| BseSI | GKGCMC | 1 cut(s) | 1800 |
| BseXI | GCAGC | 5 cut(s) | 370, 392, 1165, 2014, 2423 |
| BseYI | CCCAGC | 1 cut(s) | 464 |
| BsgI | GTGCAG | 2 cut(s) | 2698, 2937 |
| Bsh1236I | CGCG | 2 cut(s) | 546, 1361 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3502 |
| BshFI | GGCC | 4 cut(s) | 489, 1764, 1855, 1956 |
| BshVI | ATCGAT | 2 cut(s) | 153, 1983 |
| BsiEI | CGRYCG | 1 cut(s) | 3502 |
| BsiHKAI | GWGCWC | 4 cut(s) | 426, 1238, 1800, 2214 |
| BsiHKCI | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| BsiSI | CCGG | 4 cut(s) | 1601, 2707, 3116, 3618 |
| BslFI | GGGAC | 4 cut(s) | 1651, 2218, 2353, 2627 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 82, 367, 851, 889, 1155, 1783, 2793, 3427 |
| BsmAI | GTCTC | 8 cut(s) | 1464, 1933, 2185, 2381, 2432, 2630, 2688, 3469 |
| BsmFI | GGGAC | 4 cut(s) | 1651, 2218, 2353, 2627 |
| BsmI | GAATGC | 3 cut(s) | 299, 554, 3034 |
| BsnI | GGCC | 4 cut(s) | 489, 1764, 1855, 1956 |
| Bso31I | GGTCTC | 3 cut(s) | 2185, 2381, 2688 |
| BsoBI | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| Bsp119I | TTCGAA | 1 cut(s) | 3658 |
| Bsp1286I | GDGCHC | 4 cut(s) | 426, 1238, 1800, 2214 |
| Bsp13I | TCCGGA | 2 cut(s) | 2706, 3115 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3244 |
| Bsp68I | TCGCGA | 1 cut(s) | 546 |
| BspACI | CCGC | 9 cut(s) | 91, 120, 130, 1134, 1181, 1427, 2599, 3287, 3486 |
| BspANI | GGCC | 4 cut(s) | 489, 1764, 1855, 1956 |
| BspCNI | CTCAG | 9 cut(s) | 822, 1111, 1687, 1888, 1900, 1990, 2001, 2823, 3404 |
| BspDI | ATCGAT | 2 cut(s) | 153, 1983 |
| BspEI | TCCGGA | 2 cut(s) | 2706, 3115 |
| BspFNI | CGCG | 2 cut(s) | 546, 1361 |
| BspHI | TCATGA | 1 cut(s) | 1081 |
| BspLI | GGNNCC | 5 cut(s) | 1213, 2234, 2517, 2785, 3371 |
| BspMI | ACCTGC | 1 cut(s) | 196 |
| BspPI | GGATC | 6 cut(s) | 338, 842, 2979, 3364, 3377, 3496 |
| BspQI | GCTCTTC | 1 cut(s) | 1106 |
| BspT104I | TTCGAA | 1 cut(s) | 3658 |
| BspTI | CTTAAG | 1 cut(s) | 2459 |
| BspTNI | GGTCTC | 3 cut(s) | 2185, 2381, 2688 |
| BsrDI | GCAATG | 3 cut(s) | 1798, 2120, 3511 |
| BsrI | ACTGG | 2 cut(s) | 105, 2903 |
| BssECI | CCNNGG | 7 cut(s) | 76, 1599, 1778, 1964, 2618, 2825, 3373 |
| BssT1I | CCWWGG | 3 cut(s) | 1778, 1964, 3373 |
| Bst2UI | CCWGG | 4 cut(s) | 969, 1575, 1923, 2619 |
| Bst4CI | ACNGT | 6 cut(s) | 649, 714, 2297, 2641, 2935, 3666 |
| Bst6I | CTCTTC | 2 cut(s) | 1106, 2971 |
| BstAFI | CTTAAG | 1 cut(s) | 2459 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1027, 3080 |
| BstBI | TTCGAA | 1 cut(s) | 3658 |
| BstC8I | GCNNGC | 7 cut(s) | 45, 1853, 2858, 2921, 3361, 3484, 3511 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3425 |
| BstFNI | CGCG | 2 cut(s) | 546, 1361 |
| BstH2I | RGCGCY | 2 cut(s) | 1199, 2863 |
| BstHHI | GCGC | 5 cut(s) | 43, 283, 1198, 1584, 2862 |
| BstMAI | GTCTC | 8 cut(s) | 1464, 1933, 2185, 2381, 2432, 2630, 2688, 3469 |
| BstMCI | CGRYCG | 1 cut(s) | 3502 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 486, 1027, 1579, 1588, 1918, 2748, 3080, 3510 |
| BstNI | CCWGG | 4 cut(s) | 969, 1575, 1923, 2619 |
| BstNSI | RCATGY | 7 cut(s) | 47, 356, 1416, 2129, 2512, 3287, 3608 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1611 |
| BstSCI | CCNGG | 5 cut(s) | 967, 1573, 1599, 1921, 2617 |
| BstSFI | CTRYAG | 2 cut(s) | 849, 2205 |
| BstSLI | GKGCMC | 1 cut(s) | 1800 |
| BstUI | CGCG | 2 cut(s) | 546, 1361 |
| BstV1I | GCAGC | 5 cut(s) | 370, 392, 1165, 2014, 2423 |
| BstV2I | GAAGAC | 1 cut(s) | 2936 |
| BstX2I | RGATCY | 3 cut(s) | 343, 2020, 3369 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3380 |
| BstYI | RGATCY | 3 cut(s) | 343, 2020, 3369 |
| Bsu15I | ATCGAT | 2 cut(s) | 153, 1983 |
| BsuRI | GGCC | 4 cut(s) | 489, 1764, 1855, 1956 |
| BsuTUI | ATCGAT | 2 cut(s) | 153, 1983 |
| BtrI | CACGTC | 2 cut(s) | 1719, 2776 |
| BtsIMutI | CAGTG | 3 cut(s) | 645, 1905, 2940 |
| BtuMI | TCGCGA | 1 cut(s) | 546 |
| BveI | ACCTGC | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 7 cut(s) | 45, 1853, 2858, 2921, 3361, 3484, 3511 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2939 |
| CciI | TCATGA | 1 cut(s) | 1081 |
| CfoI | GCGC | 5 cut(s) | 43, 283, 1198, 1584, 2862 |
| Cfr13I | GGNCC | 6 cut(s) | 892, 965, 1762, 2232, 3435, 3575 |
| ClaI | ATCGAT | 2 cut(s) | 153, 1983 |
| Csp6I | GTAC | 5 cut(s) | 55, 356, 1596, 3127, 3412 |
| CviQI | GTAC | 5 cut(s) | 55, 356, 1596, 3127, 3412 |
| DraI | TTTAAA | 1 cut(s) | 564 |
| DraIII | CACNNNGTG | 1 cut(s) | 3403 |
| Eam1104I | CTCTTC | 2 cut(s) | 1106, 2971 |
| EarI | CTCTTC | 2 cut(s) | 1106, 2971 |
| EciI | GGCGGA | 2 cut(s) | 2614, 3501 |
| Eco130I | CCWWGG | 3 cut(s) | 1778, 1964, 3373 |
| Eco31I | GGTCTC | 3 cut(s) | 2185, 2381, 2688 |
| Eco32I | GATATC | 2 cut(s) | 1467, 3199 |
| Eco47I | GGWCC | 5 cut(s) | 892, 965, 2232, 3435, 3575 |
| Eco47III | AGCGCT | 1 cut(s) | 1197 |
| Eco57I | CTGAAG | 3 cut(s) | 1079, 3243, 3591 |
| Eco88I | CYCGRG | 4 cut(s) | 602, 1759, 3142, 3459 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3425 |
| EcoO109I | RGGNCCY | 1 cut(s) | 892 |
| EcoRI | GAATTC | 2 cut(s) | 1185, 3628 |
| EcoRII | CCWGG | 4 cut(s) | 967, 1573, 1921, 2617 |
| EcoRV | GATATC | 2 cut(s) | 1467, 3199 |
| EcoT14I | CCWWGG | 3 cut(s) | 1778, 1964, 3373 |
| EcoT22I | ATGCAT | 5 cut(s) | 620, 1005, 1324, 1414, 1518 |
| ErhI | CCWWGG | 3 cut(s) | 1778, 1964, 3373 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1676, 1708, 2639, 2671, 2968, 3000 |
| FaqI | GGGAC | 4 cut(s) | 1651, 2218, 2353, 2627 |
| FauI | CCCGC | 3 cut(s) | 98, 1174, 3280 |
| FbaI | TGATCA | 1 cut(s) | 949 |
| FblI | GTMKAC | 1 cut(s) | 2695 |
| Fnu4HI | GCNGC | 6 cut(s) | 120, 381, 384, 1179, 2003, 2437 |
| Fsp4HI | GCNGC | 6 cut(s) | 120, 381, 384, 1179, 2003, 2437 |
| FspBI | CTAG | 7 cut(s) | 461, 774, 932, 993, 1965, 2894, 3524 |
| FspI | TGCGCA | 2 cut(s) | 42, 282 |
| GlaI | GCGC | 5 cut(s) | 42, 282, 1197, 1583, 2861 |
| GluI | GCNGC | 6 cut(s) | 120, 381, 384, 1179, 2003, 2437 |
| GsaI | CCCAGC | 1 cut(s) | 468 |
| GsuI | CTGGAG | 2 cut(s) | 1919, 2552 |
| HaeII | RGCGCY | 2 cut(s) | 1199, 2863 |
| HaeIII | GGCC | 4 cut(s) | 489, 1764, 1855, 1956 |
| HapII | CCGG | 4 cut(s) | 1601, 2707, 3116, 3618 |
| HhaI | GCGC | 5 cut(s) | 43, 283, 1198, 1584, 2862 |
| Hin6I | GCGC | 5 cut(s) | 41, 281, 1196, 1582, 2860 |
| HinP1I | GCGC | 5 cut(s) | 41, 281, 1196, 1582, 2860 |
| HincII | GTYRAC | 2 cut(s) | 2946, 3265 |
| HindII | GTYRAC | 2 cut(s) | 2946, 3265 |
| HindIII | AAGCTT | 4 cut(s) | 729, 2111, 2306, 2629 |
| HpaI | GTTAAC | 1 cut(s) | 2946 |
| HpaII | CCGG | 4 cut(s) | 1601, 2707, 3116, 3618 |
| HphI | GGTGA | 7 cut(s) | 959, 1760, 3178, 3311, 3338, 3442, 3550 |
| Hpy166II | GTNNAC | 9 cut(s) | 1488, 1556, 1596, 1798, 2038, 2696, 2946, 3265, 3438 |
| Hpy8I | GTNNAC | 9 cut(s) | 1488, 1556, 1596, 1798, 2038, 2696, 2946, 3265, 3438 |
| Hpy99I | CGWCG | 3 cut(s) | 1227, 2668, 2671 |
| HpyCH4III | ACNGT | 6 cut(s) | 649, 714, 2297, 2641, 2935, 3666 |
| HpyCH4IV | ACGT | 5 cut(s) | 406, 1718, 2589, 2775, 3214 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 486, 1027, 1579, 1588, 1918, 2748, 3080, 3510 |
| HpySE526I | ACGT | 5 cut(s) | 406, 1718, 2589, 2775, 3214 |
| HspAI | GCGC | 5 cut(s) | 41, 281, 1196, 1582, 2860 |
| Kpn2I | TCCGGA | 2 cut(s) | 2706, 3115 |
| Ksp22I | TGATCA | 1 cut(s) | 949 |
| KspAI | GTTAAC | 1 cut(s) | 2946 |
| LguI | GCTCTTC | 1 cut(s) | 1106 |
| LmnI | GCTCC | 4 cut(s) | 1037, 1136, 2515, 2796 |
| Lsp1109I | GCAGC | 5 cut(s) | 370, 392, 1165, 2014, 2423 |
| MaeI | CTAG | 7 cut(s) | 461, 774, 932, 993, 1965, 2894, 3524 |
| MaeII | ACGT | 5 cut(s) | 406, 1718, 2589, 2775, 3214 |
| MaeIII | GTNAC | 3 cut(s) | 1502, 2613, 2912 |
| MfeI | CAATTG | 2 cut(s) | 1545, 2367 |
| MflI | RGATCY | 3 cut(s) | 343, 2020, 3369 |
| MhlI | GDGCHC | 4 cut(s) | 426, 1238, 1800, 2214 |
| MlyI | GAGTC | 3 cut(s) | 614, 1690, 3471 |
| MmeI | TCCRAC | 3 cut(s) | 556, 1602, 2493 |
| Mph1103I | ATGCAT | 5 cut(s) | 620, 1005, 1324, 1414, 1518 |
| MroI | TCCGGA | 2 cut(s) | 2706, 3115 |
| MroXI | GAANNNNTTC | 5 cut(s) | 633, 1092, 1647, 1824, 2103 |
| MslI | CAYNNNNRTG | 5 cut(s) | 114, 613, 1110, 1454, 2130 |
| MspA1I | CMGCKG | 3 cut(s) | 383, 1851, 2005 |
| MspCI | CTTAAG | 1 cut(s) | 2459 |
| MspI | CCGG | 4 cut(s) | 1601, 2707, 3116, 3618 |
| MspR9I | CCNGG | 5 cut(s) | 969, 1575, 1601, 1923, 2619 |
| MunI | CAATTG | 2 cut(s) | 1545, 2367 |
| Mva1269I | GAATGC | 3 cut(s) | 299, 554, 3034 |
| MvaI | CCWGG | 4 cut(s) | 969, 1575, 1923, 2619 |
| MvnI | CGCG | 2 cut(s) | 546, 1361 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 486, 1027, 1579, 1588, 1918, 2748, 3080, 3510 |
| NciI | CCSGG | 1 cut(s) | 1601 |
| NlaIV | GGNNCC | 5 cut(s) | 1213, 2234, 2517, 2785, 3371 |
| NmeAIII | GCCGAG | 1 cut(s) | 2806 |
| NmuCI | GTSAC | 1 cut(s) | 2912 |
| NruI | TCGCGA | 1 cut(s) | 546 |
| NsbI | TGCGCA | 2 cut(s) | 42, 282 |
| NsiI | ATGCAT | 5 cut(s) | 620, 1005, 1324, 1414, 1518 |
| NspI | RCATGY | 7 cut(s) | 47, 356, 1416, 2129, 2512, 3287, 3608 |
| NspV | TTCGAA | 1 cut(s) | 3658 |
| PaeI | GCATGC | 1 cut(s) | 47 |
| PaeR7I | CTCGAG | 2 cut(s) | 602, 3459 |
| PagI | TCATGA | 1 cut(s) | 1081 |
| PaqCI | CACCTGC | 1 cut(s) | 196 |
| PciI | ACATGT | 2 cut(s) | 352, 2508 |
| PciSI | GCTCTTC | 1 cut(s) | 1106 |
| PctI | GAATGC | 3 cut(s) | 299, 554, 3034 |
| PdmI | GAANNNNTTC | 5 cut(s) | 633, 1092, 1647, 1824, 2103 |
| PflFI | GACNNNGTC | 1 cut(s) | 2935 |
| PkrI | GCNGC | 6 cut(s) | 121, 382, 385, 1180, 2004, 2438 |
| Ple19I | CGATCG | 1 cut(s) | 3502 |
| PleI | GAGTC | 3 cut(s) | 613, 1690, 3470 |
| PpsI | GAGTC | 3 cut(s) | 613, 1690, 3470 |
| PpuMI | RGGWCCY | 1 cut(s) | 892 |
| PscI | ACATGT | 2 cut(s) | 352, 2508 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1611 |
| PsiI | TTATAA | 3 cut(s) | 866, 986, 3006 |
| Psp1406I | AACGTT | 1 cut(s) | 406 |
| Psp5II | RGGWCCY | 1 cut(s) | 892 |
| Psp6I | CCWGG | 4 cut(s) | 967, 1573, 1921, 2617 |
| PspFI | CCCAGC | 1 cut(s) | 464 |
| PspGI | CCWGG | 4 cut(s) | 967, 1573, 1921, 2617 |
| PspN4I | GGNNCC | 5 cut(s) | 1213, 2234, 2517, 2785, 3371 |
| PspPI | GGNCC | 6 cut(s) | 892, 965, 1762, 2232, 3435, 3575 |
| PspPPI | RGGWCCY | 1 cut(s) | 892 |
| PspXI | VCTCGAGB | 2 cut(s) | 602, 3459 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 618, 650 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2939 |
| PsuI | RGATCY | 3 cut(s) | 343, 2020, 3369 |
| PsyI | GACNNNGTC | 1 cut(s) | 2935 |
| PvuI | CGATCG | 1 cut(s) | 3502 |
| PvuII | CAGCTG | 3 cut(s) | 383, 1851, 2005 |
| RruI | TCGCGA | 1 cut(s) | 546 |
| RsaI | GTAC | 5 cut(s) | 56, 357, 1597, 3128, 3413 |
| RsaNI | GTAC | 5 cut(s) | 55, 356, 1596, 3127, 3412 |
| RseI | CAYNNNNRTG | 5 cut(s) | 114, 613, 1110, 1454, 2130 |
| SapI | GCTCTTC | 1 cut(s) | 1106 |
| SatI | GCNGC | 6 cut(s) | 120, 381, 384, 1179, 2003, 2437 |
| Sau96I | GGNCC | 6 cut(s) | 892, 965, 1762, 2232, 3435, 3575 |
| SchI | GAGTC | 3 cut(s) | 614, 1690, 3471 |
| ScrFI | CCNGG | 5 cut(s) | 969, 1575, 1601, 1923, 2619 |
| SduI | GDGCHC | 4 cut(s) | 426, 1238, 1800, 2214 |
| SfcI | CTRYAG | 2 cut(s) | 849, 2205 |
| Sfr274I | CTCGAG | 2 cut(s) | 602, 3459 |
| SfuI | TTCGAA | 1 cut(s) | 3658 |
| SinI | GGWCC | 5 cut(s) | 892, 965, 2232, 3435, 3575 |
| SlaI | CTCGAG | 2 cut(s) | 602, 3459 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 114, 613, 1110, 1454, 2130 |
| SmlI | CTYRAG | 6 cut(s) | 425, 553, 602, 1701, 2459, 3459 |
| SmoI | CTYRAG | 6 cut(s) | 425, 553, 602, 1701, 2459, 3459 |
| SphI | GCATGC | 1 cut(s) | 47 |
| SsiI | CCGC | 9 cut(s) | 91, 120, 130, 1134, 1181, 1427, 2599, 3287, 3486 |
| SspI | AATATT | 1 cut(s) | 1874 |
| SspMI | CTAG | 7 cut(s) | 461, 774, 932, 993, 1965, 2894, 3524 |
| StyD4I | CCNGG | 5 cut(s) | 967, 1573, 1599, 1921, 2617 |
| StyI | CCWWGG | 3 cut(s) | 1778, 1964, 3373 |
| TaaI | ACNGT | 6 cut(s) | 649, 714, 2297, 2641, 2935, 3666 |
| TaiI | ACGT | 5 cut(s) | 409, 1721, 2592, 2778, 3217 |
| TaqII | GACCGA | 2 cut(s) | 2659, 3597 |
| TauI | GCSGC | 1 cut(s) | 122 |
| TscAI | CASTG | 3 cut(s) | 652, 1912, 2940 |
| TseFI | GTSAC | 1 cut(s) | 2912 |
| TseI | GCWGC | 5 cut(s) | 380, 383, 1178, 2002, 2436 |
| Tsp45I | GTSAC | 1 cut(s) | 2912 |
| TspGWI | ACGGA | 3 cut(s) | 1085, 2652, 2977 |
| TspRI | CASTG | 3 cut(s) | 652, 1912, 2940 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2935 |
| Vha464I | CTTAAG | 1 cut(s) | 2459 |
| VneI | GTGCAC | 1 cut(s) | 1796 |
| VpaK11BI | GGWCC | 5 cut(s) | 892, 965, 2232, 3435, 3575 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3425 |
| XapI | RAATTY | 5 cut(s) | 1185, 1730, 2558, 3153, 3628 |
| XbaI | TCTAGA | 1 cut(s) | 2893 |
| XceI | RCATGY | 7 cut(s) | 47, 356, 1416, 2129, 2512, 3287, 3608 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2298 |
| XhoI | CTCGAG | 2 cut(s) | 602, 3459 |
| XmaJI | CCTAGG | 1 cut(s) | 1964 |
| XmiI | GTMKAC | 1 cut(s) | 2695 |
| XmnI | GAANNNNTTC | 5 cut(s) | 633, 1092, 1647, 1824, 2103 |
| XspI | CTAG | 7 cut(s) | 461, 774, 932, 993, 1965, 2894, 3524 |
| Zsp2I | ATGCAT | 5 cut(s) | 620, 1005, 1324, 1414, 1518 |