Disease resistance protein (TIR-NBS-LRR class)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LSM | PF01423 | 7 - 73 | 1.2e-18 | LSM domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 230 |
| AclWI | GGATC | 1 cut(s) | 240 |
| AflIII | ACRYGT | 1 cut(s) | 136 |
| AgsI | TTSAA | 2 cut(s) | 88, 243 |
| AjnI | CCWGG | 2 cut(s) | 13, 99 |
| Alw26I | GTCTC | 1 cut(s) | 132 |
| AlwI | GGATC | 1 cut(s) | 240 |
| AoxI | GGCC | 1 cut(s) | 10 |
| AspS9I | GGNCC | 1 cut(s) | 11 |
| BauI | CACGAG | 1 cut(s) | 170 |
| BbsI | GAAGAC | 1 cut(s) | 133 |
| BccI | CCATC | 1 cut(s) | 56 |
| BciT130I | CCWGG | 2 cut(s) | 15, 101 |
| BciVI | GTATCC | 1 cut(s) | 282 |
| BclI | TGATCA | 1 cut(s) | 34 |
| BcoDI | GTCTC | 1 cut(s) | 132 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BfuI | GTATCC | 1 cut(s) | 282 |
| Bme1390I | CCNGG | 2 cut(s) | 15, 101 |
| BmgT120I | GGNCC | 1 cut(s) | 11 |
| BmrFI | CCNGG | 2 cut(s) | 15, 101 |
| BmsI | GCATC | 2 cut(s) | 217, 219 |
| BpiI | GAAGAC | 1 cut(s) | 133 |
| BpuEI | CTTGAG | 1 cut(s) | 41 |
| BsaBI | GATNNNNATC | 1 cut(s) | 231 |
| BsaJI | CCNNGG | 1 cut(s) | 13 |
| BsaWI | WCCGGW | 1 cut(s) | 5 |
| Bse1I | ACTGG | 1 cut(s) | 257 |
| Bse8I | GATNNNNATC | 1 cut(s) | 231 |
| BseBI | CCWGG | 2 cut(s) | 15, 101 |
| BseDI | CCNNGG | 1 cut(s) | 13 |
| BseGI | GGATG | 1 cut(s) | 288 |
| BseJI | GATNNNNATC | 1 cut(s) | 231 |
| BseNI | ACTGG | 1 cut(s) | 257 |
| BshFI | GGCC | 1 cut(s) | 12 |
| BsiSI | CCGG | 1 cut(s) | 6 |
| BsmAI | GTCTC | 1 cut(s) | 132 |
| BsnI | GGCC | 1 cut(s) | 12 |
| Bsp143I | GATC | 2 cut(s) | 34, 232 |
| BspACI | CCGC | 1 cut(s) | 230 |
| BspANI | GGCC | 1 cut(s) | 12 |
| BspHI | TCATGA | 1 cut(s) | 130 |
| BspPI | GGATC | 1 cut(s) | 240 |
| BsrI | ACTGG | 1 cut(s) | 257 |
| BssECI | CCNNGG | 1 cut(s) | 13 |
| BssMI | GATC | 2 cut(s) | 34, 232 |
| BssSI | CACGAG | 1 cut(s) | 170 |
| Bst2BI | CACGAG | 1 cut(s) | 170 |
| Bst2UI | CCWGG | 2 cut(s) | 15, 101 |
| BstF5I | GGATG | 1 cut(s) | 288 |
| BstKTI | GATC | 2 cut(s) | 37, 235 |
| BstMAI | GTCTC | 1 cut(s) | 132 |
| BstMBI | GATC | 2 cut(s) | 34, 232 |
| BstNI | CCWGG | 2 cut(s) | 15, 101 |
| BstSCI | CCNGG | 2 cut(s) | 13, 99 |
| BstV2I | GAAGAC | 1 cut(s) | 133 |
| BstX2I | RGATCY | 1 cut(s) | 232 |
| BstYI | RGATCY | 1 cut(s) | 232 |
| BsuI | GTATCC | 1 cut(s) | 282 |
| BsuRI | GGCC | 1 cut(s) | 12 |
| BtsCI | GGATG | 1 cut(s) | 288 |
| CciI | TCATGA | 1 cut(s) | 130 |
| Cfr13I | GGNCC | 1 cut(s) | 11 |
| CseI | GACGC | 1 cut(s) | 75 |
| CviAII | CATG | 1 cut(s) | 131 |
| CviJI | RGCY | 5 cut(s) | 12, 93, 104, 246, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 12, 93, 104, 246, 283 |
| DpnI | GATC | 2 cut(s) | 36, 234 |
| DpnII | GATC | 2 cut(s) | 34, 232 |
| EcoRII | CCWGG | 2 cut(s) | 13, 99 |
| FaeI | CATG | 1 cut(s) | 134 |
| FaiI | YATR | 4 cut(s) | 132, 186, 188, 206 |
| FatI | CATG | 1 cut(s) | 130 |
| FbaI | TGATCA | 1 cut(s) | 34 |
| FokI | GGATG | 1 cut(s) | 275 |
| FspBI | CTAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 1 cut(s) | 12 |
| HapII | CCGG | 1 cut(s) | 6 |
| HgaI | GACGC | 1 cut(s) | 75 |
| Hin1II | CATG | 1 cut(s) | 134 |
| HinfI | GANTC | 3 cut(s) | 23, 125, 239 |
| HpaII | CCGG | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 1 cut(s) | 279 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 85, 119, 131, 236 |
| HpyCH4IV | ACGT | 1 cut(s) | 136 |
| HpySE526I | ACGT | 1 cut(s) | 136 |
| Hsp92II | CATG | 1 cut(s) | 134 |
| Ksp22I | TGATCA | 1 cut(s) | 34 |
| Kzo9I | GATC | 2 cut(s) | 34, 232 |
| LpnPI | CCDG | 6 cut(s) | 19, 27, 86, 113, 178, 238 |
| LweI | GCATC | 2 cut(s) | 217, 219 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MaeII | ACGT | 1 cut(s) | 136 |
| MaeIII | GTNAC | 1 cut(s) | 24 |
| MalI | GATC | 2 cut(s) | 36, 234 |
| MboI | GATC | 2 cut(s) | 34, 232 |
| MboII | GAAGA | 2 cut(s) | 133, 271 |
| MflI | RGATCY | 1 cut(s) | 232 |
| MluCI | AATT | 1 cut(s) | 42 |
| MlyI | GAGTC | 2 cut(s) | 32, 134 |
| MnlI | CCTC | 2 cut(s) | 148, 285 |
| MslI | CAYNNNNRTG | 1 cut(s) | 135 |
| MspI | CCGG | 1 cut(s) | 6 |
| MspR9I | CCNGG | 2 cut(s) | 15, 101 |
| MvaI | CCWGG | 2 cut(s) | 15, 101 |
| NdeII | GATC | 2 cut(s) | 34, 232 |
| NlaIII | CATG | 1 cut(s) | 134 |
| NmuCI | GTSAC | 1 cut(s) | 24 |
| PagI | TCATGA | 1 cut(s) | 130 |
| PfeI | GAWTC | 1 cut(s) | 239 |
| PleI | GAGTC | 2 cut(s) | 31, 133 |
| PpsI | GAGTC | 2 cut(s) | 31, 133 |
| Psp6I | CCWGG | 2 cut(s) | 13, 99 |
| PspGI | CCWGG | 2 cut(s) | 13, 99 |
| PspPI | GGNCC | 1 cut(s) | 11 |
| PsuI | RGATCY | 1 cut(s) | 232 |
| RseI | CAYNNNNRTG | 1 cut(s) | 135 |
| Sau3AI | GATC | 2 cut(s) | 34, 232 |
| Sau96I | GGNCC | 1 cut(s) | 11 |
| SchI | GAGTC | 2 cut(s) | 32, 134 |
| ScrFI | CCNGG | 2 cut(s) | 15, 101 |
| SetI | ASST | 1 cut(s) | 139 |
| SfaNI | GCATC | 2 cut(s) | 217, 219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 135 |
| SmlI | CTYRAG | 1 cut(s) | 20 |
| SmoI | CTYRAG | 1 cut(s) | 20 |
| Sse9I | AATT | 1 cut(s) | 42 |
| SsiI | CCGC | 1 cut(s) | 230 |
| SspI | AATATT | 1 cut(s) | 73 |
| SspMI | CTAG | 1 cut(s) | 224 |
| StyD4I | CCNGG | 2 cut(s) | 13, 99 |
| TaiI | ACGT | 1 cut(s) | 139 |
| TaqI | TCGA | 1 cut(s) | 257 |
| TasI | AATT | 1 cut(s) | 42 |
| TfiI | GAWTC | 1 cut(s) | 239 |
| TseFI | GTSAC | 1 cut(s) | 24 |
| Tsp45I | GTSAC | 1 cut(s) | 24 |
| TspDTI | ATGAA | 1 cut(s) | 147 |
| XspI | CTAG | 1 cut(s) | 224 |