RchiOBHm_Chr6g0287411

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
50808252 .. 50809591
1340 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25782

Sequence Viewer

Length: 1083 bp
ATGTGTGAAAACCTTGAGCTTGTCCCAAGCAGCATGTACAATTTAAATCGTCTTAAAAGTCTCATCATTTTTGGATGTTCGAAAATTAGAAACTTGCCTGCCTTCTCAGTCGGTTTGCCCTCTTTGAAAAGACTAGAGCTCAGTTATTGCAGTGTTTTAGAAATCCCTGATGATCTCATTAGCTTATCATCATTGCGGAGGCTAAATTTAAGTGGAAGCATAGTTGAGAGATTACCTGCAAGCATCGTGCACGTTTCGGGGCTGGAGTATCTAAGCTTAAGAGATTGCAACAGTCTTCAATCTTTACCGGAGCTCCCATTGCTTCTAGAACATTTTGATGCCTATGGCTTCCGGGGACGAAAGACAGCGTTAAGTTCGAGGACTACAGTCAGACAAGGTTGGGATCAATATCAGGTTTCTGATGACAAACATGTGTTCTCTAATTGCTTAAGACTGGATCAGAATGCATGGAGCGGCATGGGATTGGATGCACAGCTTAGAATTTTTCTAATGGCAATTGCGTCATCAAAGTTTAAACAAAAAACTGGTCATCTCTACGGTCATGAACGTTGGGATGCAAAAGCTTCAATTACAATTTTATGTCCGGGAAATGAAATTCCAAAGTGGTTTGGCTATCAAACTAAAGGATCTTCAATAAAAATCAAGCTTCCTCCTAATTGGTTTGATACGAACTTCTTAGGTTTTACTCTATCCGTTGCCGCATTCGACAGACATAATGATTTTCCTCTTTACTTACACTTTGGATTTGGATGTAAATCCTATTTCAAAACCAACAATGGTGAAACCATCGAGTTTAATTGCTGTTTGGATAATTGGAATTTCGTTGAGCATAGAGCTGGAAGTGCCAATGCCCATTATGTGGTTATGTGGTATCTTACTCCCCTAAAAGGAGATGGAGCAAAATGGCCCTCTAGTTTTTACAATGTCACGGAGGCTTTCTTTGAGTTCTACCCTCTAGACTGGTCCAAACGACCCACTGTGAAGAAATGTGGGATTGGCCTGCTGTCTTCCCCAGAATTTGATTTCTTCGATGAAGTTGTTAGGGATATCACGCGCATATGA

Protein Analysis

360

Amino Acids

41.06

Weight (kDa)

8.25

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 40 - 97 5.5e-06 Leucine rich repeat
C-JID PF20160 201 - 342 5.9e-17 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 244
AccB7I CCANNNNNTGG 1 cut(s) 880
AccBSI CCGCTC 1 cut(s) 474
AccII CGCG 1 cut(s) 1075
AciI CCGC 3 cut(s) 196, 474, 720
AclI AACGTT 1 cut(s) 568
AclWI GGATC 3 cut(s) 411, 465, 655
AcsI RAATTY 5 cut(s) 205, 501, 615, 838, 1037
AfaI GTAC 1 cut(s) 38
AfiI CCNNNNNNNGG 2 cut(s) 880, 908
AflII CTTAAG 2 cut(s) 277, 448
AflIII ACRYGT 1 cut(s) 430
AgsI TTSAA 5 cut(s) 127, 299, 588, 654, 787
AluBI AGCT 9 cut(s) 19, 139, 183, 276, 313, 496, 584, 667, 857
AluI AGCT 9 cut(s) 19, 139, 183, 276, 313, 496, 584, 667, 857
Alw21I GWGCWC 3 cut(s) 141, 252, 315
Alw26I GTCTC 1 cut(s) 65
Alw44I GTGCAC 1 cut(s) 248
AlwI GGATC 3 cut(s) 411, 465, 655
AoxI GGCC 2 cut(s) 926, 1018
ApaLI GTGCAC 1 cut(s) 248
ApeKI GCWGC 1 cut(s) 30
ApoI RAATTY 5 cut(s) 205, 501, 615, 838, 1037
ArsI GACNNNNNNTTYG 2 cut(s) 532, 564
AspLEI GCGC 1 cut(s) 1077
AspS9I GGNCC 2 cut(s) 927, 984
AsuC2I CCSGG 2 cut(s) 353, 606
AsuHPI GGTGA 1 cut(s) 812
AsuII TTCGAA 1 cut(s) 80
AvaII GGWCC 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 252
BanII GRGCYC 2 cut(s) 141, 315
BbsI GAAGAC 2 cut(s) 287, 1020
Bbv12I GWGCWC 3 cut(s) 141, 252, 315
BbvI GCAGC 1 cut(s) 42
BccI CCATC 2 cut(s) 815, 908
BcnI CCSGG 2 cut(s) 353, 606
BcoDI GTCTC 1 cut(s) 65
BfaI CTAG 4 cut(s) 134, 326, 933, 977
BfmI CTRYAG 1 cut(s) 384
BfrI CTTAAG 2 cut(s) 277, 448
BfuAI ACCTGC 1 cut(s) 244
BisI GCNGC 3 cut(s) 31, 475, 720
BlsI GCNGC 3 cut(s) 32, 476, 721
Bme1390I CCNGG 2 cut(s) 353, 606
Bme18I GGWCC 1 cut(s) 984
BmgT120I GGNCC 2 cut(s) 927, 984
BmrFI CCNGG 2 cut(s) 353, 606
BmsI GCATC 4 cut(s) 252, 328, 478, 565
BoxI GACNNNNGTC 1 cut(s) 386
BpiI GAAGAC 2 cut(s) 287, 1020
BpmI CTGGAG 1 cut(s) 284
Bpu14I TTCGAA 1 cut(s) 80
BpuEI CTTGAG 1 cut(s) 35
BpuMI CCSGG 2 cut(s) 353, 606
BsaBI GATNNNNATC 2 cut(s) 408, 775
BsaJI CCNNGG 1 cut(s) 352
BsaWI WCCGGW 1 cut(s) 307
BsaXI ACNNNNNCTCC 2 cut(s) 297, 327
Bsc4I CCNNNNNNNGG 2 cut(s) 880, 908
Bse1I ACTGG 3 cut(s) 459, 550, 986
Bse3DI GCAATG 2 cut(s) 191, 317
Bse8I GATNNNNATC 2 cut(s) 408, 775
BseDI CCNNGG 1 cut(s) 352
BseGI GGATG 4 cut(s) 80, 493, 580, 776
BseJI GATNNNNATC 2 cut(s) 408, 775
BseLI CCNNNNNNNGG 2 cut(s) 880, 908
BseMI GCAATG 2 cut(s) 191, 317
BseMII CTCAG 2 cut(s) 120, 154
BseNI ACTGG 3 cut(s) 459, 550, 986
BseSI GKGCMC 1 cut(s) 252
BseXI GCAGC 1 cut(s) 42
Bsh1236I CGCG 1 cut(s) 1075
BshFI GGCC 2 cut(s) 928, 1020
BsiHKAI GWGCWC 3 cut(s) 141, 252, 315
BsiSI CCGG 3 cut(s) 308, 352, 605
BslFI GGGAC 2 cut(s) 8, 369
BslI CCNNNNNNNGG 2 cut(s) 880, 908
BsmAI GTCTC 1 cut(s) 65
BsmFI GGGAC 2 cut(s) 8, 369
BsmI GAATGC 2 cut(s) 469, 722
BsnI GGCC 2 cut(s) 928, 1020
Bsp119I TTCGAA 1 cut(s) 80
Bsp1286I GDGCHC 3 cut(s) 141, 252, 315
Bsp1407I TGTACA 1 cut(s) 36
Bsp143I GATC 4 cut(s) 172, 403, 457, 647
BspACI CCGC 3 cut(s) 196, 474, 720
BspANI GGCC 2 cut(s) 928, 1020
BspCNI CTCAG 2 cut(s) 119, 153
BspFNI CGCG 1 cut(s) 1075
BspHI TCATGA 1 cut(s) 562
BspMI ACCTGC 1 cut(s) 244
BspPI GGATC 3 cut(s) 411, 465, 655
BspT104I TTCGAA 1 cut(s) 80
BspTI CTTAAG 2 cut(s) 277, 448
BsrBI CCGCTC 1 cut(s) 474
BsrDI GCAATG 2 cut(s) 191, 317
BsrGI TGTACA 1 cut(s) 36
BsrI ACTGG 3 cut(s) 459, 550, 986
BssECI CCNNGG 1 cut(s) 352
BssMI GATC 4 cut(s) 172, 403, 457, 647
Bst4CI ACNGT 4 cut(s) 293, 388, 560, 1000
BstAFI CTTAAG 2 cut(s) 277, 448
BstAUI TGTACA 1 cut(s) 36
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 3 cut(s) 99, 241, 1022
BstDEI CTNAG 5 cut(s) 106, 140, 272, 497, 697
BstF5I GGATG 4 cut(s) 80, 493, 580, 776
BstFNI CGCG 1 cut(s) 1075
BstHHI GCGC 1 cut(s) 1077
BstKTI GATC 4 cut(s) 175, 406, 460, 650
BstMAI GTCTC 1 cut(s) 65
BstMBI GATC 4 cut(s) 172, 403, 457, 647
BstMWI GCNNNNNNNGC 2 cut(s) 319, 863
BstNSI RCATGY 2 cut(s) 37, 434
BstPAI GACNNNNGTC 1 cut(s) 386
BstSCI CCNGG 2 cut(s) 351, 604
BstSFI CTRYAG 1 cut(s) 384
BstSLI GKGCMC 1 cut(s) 252
BstUI CGCG 1 cut(s) 1075
BstV1I GCAGC 1 cut(s) 42
BstV2I GAAGAC 2 cut(s) 287, 1020
BstX2I RGATCY 1 cut(s) 647
BstYI RGATCY 1 cut(s) 647
BsuRI GGCC 2 cut(s) 928, 1020
BtsCI GGATG 4 cut(s) 80, 493, 580, 776
BtsI GCAGTG 1 cut(s) 157
BtsIMutI CAGTG 2 cut(s) 157, 996
BveI ACCTGC 1 cut(s) 244
Cac8I GCNNGC 3 cut(s) 99, 241, 1022
CciI TCATGA 1 cut(s) 562
CfoI GCGC 1 cut(s) 1077
Cfr13I GGNCC 2 cut(s) 927, 984
CseI GACGC 1 cut(s) 510
Csp6I GTAC 1 cut(s) 37
CviAII CATG 5 cut(s) 34, 431, 468, 478, 563
CviQI GTAC 1 cut(s) 37
DdeI CTNAG 5 cut(s) 106, 140, 272, 497, 697
DpnI GATC 4 cut(s) 174, 405, 459, 649
DpnII GATC 4 cut(s) 172, 403, 457, 647
DraI TTTAAA 2 cut(s) 45, 535
Ecl136II GAGCTC 2 cut(s) 139, 313
Eco24I GRGCYC 2 cut(s) 141, 315
Eco32I GATATC 1 cut(s) 1069
Eco47I GGWCC 1 cut(s) 984
Eco53kI GAGCTC 2 cut(s) 139, 313
EcoICRI GAGCTC 2 cut(s) 139, 313
EcoRV GATATC 1 cut(s) 1069
EcoT22I ATGCAT 1 cut(s) 469
EcoT38I GRGCYC 2 cut(s) 141, 315
FaeI CATG 5 cut(s) 37, 434, 471, 481, 566
FaqI GGGAC 2 cut(s) 8, 369
FatI CATG 5 cut(s) 33, 430, 467, 477, 562
FauNDI CATATG 1 cut(s) 1079
Fnu4HI GCNGC 3 cut(s) 31, 475, 720
FokI GGATG 4 cut(s) 87, 500, 587, 783
FriOI GRGCYC 2 cut(s) 141, 315
Fsp4HI GCNGC 3 cut(s) 31, 475, 720
FspBI CTAG 4 cut(s) 134, 326, 933, 977
GlaI GCGC 1 cut(s) 1076
GluI GCNGC 3 cut(s) 31, 475, 720
GsuI CTGGAG 1 cut(s) 284
HaeIII GGCC 2 cut(s) 928, 1020
HapII CCGG 3 cut(s) 308, 352, 605
HgaI GACGC 1 cut(s) 510
HhaI GCGC 1 cut(s) 1077
Hin1II CATG 5 cut(s) 37, 434, 471, 481, 566
Hin6I GCGC 1 cut(s) 1075
HinP1I GCGC 1 cut(s) 1075
HindIII AAGCTT 3 cut(s) 274, 582, 665
HpaII CCGG 3 cut(s) 308, 352, 605
HphI GGTGA 1 cut(s) 812
Hpy166II GTNNAC 1 cut(s) 250
Hpy188I TCNGA 3 cut(s) 392, 421, 462
Hpy188III TCNNGA 3 cut(s) 326, 563, 977
Hpy8I GTNNAC 1 cut(s) 250
HpyAV CCTTC 1 cut(s) 112
HpyCH4III ACNGT 4 cut(s) 293, 388, 560, 1000
HpyCH4IV ACGT 2 cut(s) 252, 568
HpyCH4V TGCA 7 cut(s) 150, 239, 250, 288, 467, 491, 578
HpyF10VI GCNNNNNNNGC 2 cut(s) 319, 863
HpyF3I CTNAG 5 cut(s) 106, 140, 272, 497, 697
HpySE526I ACGT 2 cut(s) 252, 568
Hsp92II CATG 5 cut(s) 37, 434, 471, 481, 566
HspAI GCGC 1 cut(s) 1075
Kzo9I GATC 4 cut(s) 172, 403, 457, 647
LmnI GCTCC 4 cut(s) 310, 318, 471, 917
Lsp1109I GCAGC 1 cut(s) 42
LweI GCATC 4 cut(s) 252, 328, 478, 565
MaeI CTAG 4 cut(s) 134, 326, 933, 977
MaeII ACGT 2 cut(s) 252, 568
MaeIII GTNAC 1 cut(s) 946
MalI GATC 4 cut(s) 174, 405, 459, 649
MbiI CCGCTC 1 cut(s) 474
MboI GATC 4 cut(s) 172, 403, 457, 647
MboII GAAGA 5 cut(s) 287, 642, 1015, 1020, 1039
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 1 cut(s) 647
MhlI GDGCHC 3 cut(s) 141, 252, 315
MnlI CCTC 8 cut(s) 130, 192, 372, 681, 756, 940, 946, 984
Mph1103I ATGCAT 1 cut(s) 469
MseI TTAA 8 cut(s) 44, 54, 209, 278, 371, 449, 534, 816
MslI CAYNNNNRTG 1 cut(s) 336
MspCI CTTAAG 2 cut(s) 277, 448
MspI CCGG 3 cut(s) 308, 352, 605
MspR9I CCNGG 2 cut(s) 353, 606
MssI GTTTAAAC 1 cut(s) 535
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 2 cut(s) 469, 722
MvnI CGCG 1 cut(s) 1075
MwoI GCNNNNNNNGC 2 cut(s) 319, 863
NciI CCSGG 2 cut(s) 353, 606
NdeI CATATG 1 cut(s) 1079
NdeII GATC 4 cut(s) 172, 403, 457, 647
NlaIII CATG 5 cut(s) 37, 434, 471, 481, 566
NmuCI GTSAC 1 cut(s) 946
NsiI ATGCAT 1 cut(s) 469
NspI RCATGY 2 cut(s) 37, 434
NspV TTCGAA 1 cut(s) 80
PagI TCATGA 1 cut(s) 562
PciI ACATGT 1 cut(s) 430
PctI GAATGC 2 cut(s) 469, 722
PflMI CCANNNNNTGG 1 cut(s) 880
PfoI TCCNGGA 1 cut(s) 604
PkrI GCNGC 3 cut(s) 32, 476, 721
PmeI GTTTAAAC 1 cut(s) 535
PscI ACATGT 1 cut(s) 430
PshAI GACNNNNGTC 1 cut(s) 386
Psp124BI GAGCTC 2 cut(s) 141, 315
Psp1406I AACGTT 1 cut(s) 568
PspPI GGNCC 2 cut(s) 927, 984
PsuI RGATCY 1 cut(s) 647
RsaI GTAC 1 cut(s) 38
RsaNI GTAC 1 cut(s) 37
RseI CAYNNNNRTG 1 cut(s) 336
SacI GAGCTC 2 cut(s) 141, 315
SaqAI TTAA 8 cut(s) 44, 54, 209, 278, 371, 449, 534, 816
SatI GCNGC 3 cut(s) 31, 475, 720
Sau3AI GATC 4 cut(s) 172, 403, 457, 647
Sau96I GGNCC 2 cut(s) 927, 984
ScrFI CCNGG 2 cut(s) 353, 606
SduI GDGCHC 3 cut(s) 141, 252, 315
SfaNI GCATC 4 cut(s) 252, 328, 478, 565
SfcI CTRYAG 1 cut(s) 384
SfuI TTCGAA 1 cut(s) 80
SinI GGWCC 1 cut(s) 984
SmiI ATTTAAAT 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 3 cut(s) 14, 277, 448
SmoI CTYRAG 3 cut(s) 14, 277, 448
SsiI CCGC 3 cut(s) 196, 474, 720
SspMI CTAG 4 cut(s) 134, 326, 933, 977
SstI GAGCTC 2 cut(s) 141, 315
StyD4I CCNGG 2 cut(s) 351, 604
SwaI ATTTAAAT 1 cut(s) 45
TaaI ACNGT 4 cut(s) 293, 388, 560, 1000
TaiI ACGT 2 cut(s) 255, 571
TaqI TCGA 5 cut(s) 80, 377, 726, 810, 1050
TatI WGTACW 1 cut(s) 36
TauI GCSGC 2 cut(s) 477, 722
Tru1I TTAA 8 cut(s) 44, 54, 209, 278, 371, 449, 534, 816
Tru9I TTAA 8 cut(s) 44, 54, 209, 278, 371, 449, 534, 816
TscAI CASTG 2 cut(s) 157, 1003
TseFI GTSAC 1 cut(s) 946
TseI GCWGC 1 cut(s) 30
Tsp45I GTSAC 1 cut(s) 946
TspDTI ATGAA 3 cut(s) 579, 627, 1068
TspGWI ACGGA 2 cut(s) 703, 965
TspRI CASTG 2 cut(s) 157, 1003
Van91I CCANNNNNTGG 1 cut(s) 880
Vha464I CTTAAG 2 cut(s) 277, 448
VneI GTGCAC 1 cut(s) 248
VpaK11BI GGWCC 1 cut(s) 984
XapI RAATTY 5 cut(s) 205, 501, 615, 838, 1037
XbaI TCTAGA 2 cut(s) 325, 976
XceI RCATGY 2 cut(s) 37, 434
XspI CTAG 4 cut(s) 134, 326, 933, 977
Zsp2I ATGCAT 1 cut(s) 469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.