TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 496 - 654 | 2.2e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 606 |
| AccII | CGCG | 1 cut(s) | 177 |
| AciI | CCGC | 2 cut(s) | 604, 2053 |
| AclWI | GGATC | 2 cut(s) | 1323, 1386 |
| AcsI | RAATTY | 6 cut(s) | 309, 411, 571, 1340, 1500, 1781 |
| AcvI | CACGTG | 1 cut(s) | 528 |
| AfaI | GTAC | 4 cut(s) | 34, 656, 1046, 1471 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1307, 1886, 1914 |
| AflII | CTTAAG | 1 cut(s) | 539 |
| AflIII | ACRYGT | 2 cut(s) | 525, 527 |
| AgsI | TTSAA | 7 cut(s) | 341, 571, 1615, 1643, 1852, 1961, 2095 |
| AjiI | CACGTC | 2 cut(s) | 1263, 1448 |
| AjnI | CCWGG | 4 cut(s) | 64, 264, 427, 1047 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1953, 1985 |
| Alw21I | GWGCWC | 2 cut(s) | 264, 1390 |
| Alw26I | GTCTC | 8 cut(s) | 498, 775, 1265, 1282, 1454, 1939, 2041, 2094 |
| Alw44I | GTGCAC | 1 cut(s) | 1386 |
| AlwI | GGATC | 2 cut(s) | 1323, 1386 |
| Ama87I | CYCGRG | 3 cut(s) | 36, 302, 497 |
| AoxI | GGCC | 3 cut(s) | 87, 1711, 1836 |
| ApaLI | GTGCAC | 1 cut(s) | 1386 |
| ApeKI | GCWGC | 4 cut(s) | 555, 600, 1222, 1257 |
| ApoI | RAATTY | 6 cut(s) | 309, 411, 571, 1340, 1500, 1781 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1785 |
| AspLEI | GCGC | 2 cut(s) | 177, 643 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuC2I | CCSGG | 3 cut(s) | 37, 38, 1491 |
| AsuHPI | GGTGA | 1 cut(s) | 1930 |
| AvaI | CYCGRG | 3 cut(s) | 36, 302, 497 |
| AxyI | CCTNAGG | 1 cut(s) | 84 |
| BaeGI | GKGCMC | 1 cut(s) | 1390 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 638, 670 |
| BbrPI | CACGTG | 1 cut(s) | 528 |
| BbsI | GAAGAC | 1 cut(s) | 539 |
| Bbv12I | GWGCWC | 2 cut(s) | 264, 1390 |
| BbvI | GCAGC | 4 cut(s) | 567, 587, 1209, 1244 |
| BccI | CCATC | 3 cut(s) | 99, 1639, 1680 |
| BceAI | ACGGC | 2 cut(s) | 118, 2066 |
| BciT130I | CCWGG | 4 cut(s) | 66, 266, 429, 1049 |
| BclI | TGATCA | 3 cut(s) | 858, 924, 1188 |
| BcnI | CCSGG | 3 cut(s) | 37, 38, 1491 |
| BcoDI | GTCTC | 8 cut(s) | 498, 775, 1265, 1282, 1454, 1939, 2041, 2094 |
| BfaI | CTAG | 3 cut(s) | 20, 1235, 1268 |
| BfmI | CTRYAG | 1 cut(s) | 983 |
| BfrI | CTTAAG | 1 cut(s) | 539 |
| BglII | AGATCT | 1 cut(s) | 22 |
| BisI | GCNGC | 5 cut(s) | 556, 601, 604, 1223, 1258 |
| BlsI | GCNGC | 5 cut(s) | 557, 602, 605, 1224, 1259 |
| Bme1390I | CCNGG | 7 cut(s) | 37, 38, 66, 266, 429, 1049, 1491 |
| BmeT110I | CYCGRG | 3 cut(s) | 36, 302, 497 |
| BmgBI | CACGTC | 2 cut(s) | 1263, 1448 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 1 cut(s) | 2001 |
| BmrFI | CCNGG | 7 cut(s) | 37, 38, 66, 266, 429, 1049, 1491 |
| BmrI | ACTGGG | 1 cut(s) | 1461 |
| BmsI | GCATC | 4 cut(s) | 414, 1399, 1451, 1838 |
| BmuI | ACTGGG | 1 cut(s) | 1461 |
| BpiI | GAAGAC | 1 cut(s) | 539 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 779, 811, 1262, 1294 |
| BpmI | CTGGAG | 3 cut(s) | 48, 806, 1061 |
| BpuEI | CTTGAG | 7 cut(s) | 209, 632, 679, 1075, 1094, 1264, 1320 |
| BpuMI | CCSGG | 3 cut(s) | 37, 38, 1491 |
| Bsa29I | ATCGAT | 1 cut(s) | 243 |
| BsaAI | YACGTR | 1 cut(s) | 528 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1544 |
| BsaI | GGTCTC | 1 cut(s) | 498 |
| BsaJI | CCNNGG | 5 cut(s) | 36, 37, 316, 1226, 1833 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1307, 1886, 1914 |
| Bse1I | ACTGG | 3 cut(s) | 789, 1245, 1467 |
| Bse21I | CCTNAGG | 1 cut(s) | 84 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1544 |
| BseBI | CCWGG | 4 cut(s) | 66, 266, 429, 1049 |
| BseCI | ATCGAT | 1 cut(s) | 243 |
| BseDI | CCNNGG | 5 cut(s) | 36, 37, 316, 1226, 1833 |
| BseGI | GGATG | 3 cut(s) | 1518, 1538, 1829 |
| BseJI | GATNNNNATC | 1 cut(s) | 1544 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1307, 1886, 1914 |
| BseMII | CTCAG | 3 cut(s) | 75, 92, 2083 |
| BseNI | ACTGG | 3 cut(s) | 789, 1245, 1467 |
| BseRI | GAGGAG | 1 cut(s) | 1548 |
| BseSI | GKGCMC | 1 cut(s) | 1390 |
| BseXI | GCAGC | 4 cut(s) | 567, 587, 1209, 1244 |
| BseYI | CCCAGC | 1 cut(s) | 693 |
| BsgI | GTGCAG | 3 cut(s) | 233, 1243, 1281 |
| Bsh1236I | CGCG | 1 cut(s) | 177 |
| BshFI | GGCC | 3 cut(s) | 89, 1713, 1838 |
| BshVI | ATCGAT | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 2 cut(s) | 264, 1390 |
| BsiHKCI | CYCGRG | 3 cut(s) | 36, 302, 497 |
| BsiSI | CCGG | 2 cut(s) | 37, 1490 |
| BslFI | GGGAC | 2 cut(s) | 472, 2069 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1307, 1886, 1914 |
| BsmAI | GTCTC | 8 cut(s) | 498, 775, 1265, 1282, 1454, 1939, 2041, 2094 |
| BsmBI | CGTCTC | 2 cut(s) | 1454, 2041 |
| BsmFI | GGGAC | 2 cut(s) | 472, 2069 |
| BsnI | GGCC | 3 cut(s) | 89, 1713, 1838 |
| Bso31I | GGTCTC | 1 cut(s) | 498 |
| BsoBI | CYCGRG | 3 cut(s) | 36, 302, 497 |
| Bsp1286I | GDGCHC | 2 cut(s) | 264, 1390 |
| Bsp19I | CCATGG | 1 cut(s) | 1226 |
| BspACI | CCGC | 2 cut(s) | 604, 2053 |
| BspANI | GGCC | 3 cut(s) | 89, 1713, 1838 |
| BspCNI | CTCAG | 3 cut(s) | 76, 93, 2082 |
| BspDI | ATCGAT | 1 cut(s) | 243 |
| BspFNI | CGCG | 1 cut(s) | 177 |
| BspLI | GGNNCC | 1 cut(s) | 2001 |
| BspMAI | CTGCAG | 1 cut(s) | 987 |
| BspPI | GGATC | 2 cut(s) | 1323, 1386 |
| BspQI | GCTCTTC | 1 cut(s) | 528 |
| BspTI | CTTAAG | 1 cut(s) | 539 |
| BspTNI | GGTCTC | 1 cut(s) | 498 |
| BsrBI | CCGCTC | 1 cut(s) | 606 |
| BsrI | ACTGG | 3 cut(s) | 789, 1245, 1467 |
| BssECI | CCNNGG | 5 cut(s) | 36, 37, 316, 1226, 1833 |
| BssT1I | CCWWGG | 2 cut(s) | 316, 1226 |
| Bst2UI | CCWGG | 4 cut(s) | 66, 266, 429, 1049 |
| Bst4CI | ACNGT | 4 cut(s) | 32, 1004, 1276, 1912 |
| Bst6I | CTCTTC | 2 cut(s) | 528, 773 |
| BstAFI | CTTAAG | 1 cut(s) | 539 |
| BstBAI | YACGTR | 1 cut(s) | 528 |
| BstC8I | GCNNGC | 3 cut(s) | 212, 690, 2089 |
| BstDEI | CTNAG | 9 cut(s) | 11, 84, 101, 248, 383, 445, 1418, 2043, 2069 |
| BstDSI | CCRYGG | 1 cut(s) | 1226 |
| BstF5I | GGATG | 3 cut(s) | 1518, 1538, 1829 |
| BstFNI | CGCG | 1 cut(s) | 177 |
| BstHHI | GCGC | 2 cut(s) | 177, 643 |
| BstMAI | GTCTC | 8 cut(s) | 498, 775, 1265, 1282, 1454, 1939, 2041, 2094 |
| BstNI | CCWGG | 4 cut(s) | 66, 266, 429, 1049 |
| BstSCI | CCNGG | 7 cut(s) | 35, 36, 64, 264, 427, 1047, 1489 |
| BstSFI | CTRYAG | 1 cut(s) | 983 |
| BstSLI | GKGCMC | 1 cut(s) | 1390 |
| BstUI | CGCG | 1 cut(s) | 177 |
| BstV1I | GCAGC | 4 cut(s) | 567, 587, 1209, 1244 |
| BstV2I | GAAGAC | 1 cut(s) | 539 |
| BstX2I | RGATCY | 1 cut(s) | 22 |
| BstYI | RGATCY | 1 cut(s) | 22 |
| Bsu15I | ATCGAT | 1 cut(s) | 243 |
| Bsu36I | CCTNAGG | 1 cut(s) | 84 |
| BsuRI | GGCC | 3 cut(s) | 89, 1713, 1838 |
| BsuTUI | ATCGAT | 1 cut(s) | 243 |
| BtgI | CCRYGG | 1 cut(s) | 1226 |
| BtrI | CACGTC | 2 cut(s) | 1263, 1448 |
| BtsCI | GGATG | 3 cut(s) | 1518, 1538, 1829 |
| BtsIMutI | CAGTG | 2 cut(s) | 1908, 2077 |
| Cac8I | GCNNGC | 3 cut(s) | 212, 690, 2089 |
| CfoI | GCGC | 2 cut(s) | 177, 643 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| Cfr9I | CCCGGG | 1 cut(s) | 36 |
| ClaI | ATCGAT | 1 cut(s) | 243 |
| CseI | GACGC | 1 cut(s) | 166 |
| Csp6I | GTAC | 4 cut(s) | 33, 655, 1045, 1470 |
| CviAII | CATG | 4 cut(s) | 1227, 1253, 1754, 2152 |
| CviQI | GTAC | 4 cut(s) | 33, 655, 1045, 1470 |
| DdeI | CTNAG | 9 cut(s) | 11, 84, 101, 248, 383, 445, 1418, 2043, 2069 |
| Eam1104I | CTCTTC | 2 cut(s) | 528, 773 |
| EarI | CTCTTC | 2 cut(s) | 528, 773 |
| Eco130I | CCWWGG | 2 cut(s) | 316, 1226 |
| Eco147I | AGGCCT | 2 cut(s) | 1713, 1838 |
| Eco31I | GGTCTC | 1 cut(s) | 498 |
| Eco32I | GATATC | 1 cut(s) | 2029 |
| Eco72I | CACGTG | 1 cut(s) | 528 |
| Eco81I | CCTNAGG | 1 cut(s) | 84 |
| Eco88I | CYCGRG | 3 cut(s) | 36, 302, 497 |
| EcoO109I | RGGNCCY | 1 cut(s) | 88 |
| EcoRI | GAATTC | 3 cut(s) | 309, 571, 1340 |
| EcoRII | CCWGG | 4 cut(s) | 64, 264, 427, 1047 |
| EcoRV | GATATC | 1 cut(s) | 2029 |
| EcoT14I | CCWWGG | 2 cut(s) | 316, 1226 |
| EcoT22I | ATGCAT | 1 cut(s) | 1601 |
| ErhI | CCWWGG | 2 cut(s) | 316, 1226 |
| Esp3I | CGTCTC | 2 cut(s) | 1454, 2041 |
| FaeI | CATG | 4 cut(s) | 1230, 1256, 1757, 2155 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 544, 576 |
| FaqI | GGGAC | 2 cut(s) | 472, 2069 |
| FatI | CATG | 4 cut(s) | 1226, 1252, 1753, 2151 |
| FauI | CCCGC | 1 cut(s) | 2046 |
| FauNDI | CATATG | 1 cut(s) | 171 |
| FbaI | TGATCA | 3 cut(s) | 858, 924, 1188 |
| Fnu4HI | GCNGC | 5 cut(s) | 556, 601, 604, 1223, 1258 |
| FokI | GGATG | 3 cut(s) | 1525, 1545, 1816 |
| Fsp4HI | GCNGC | 5 cut(s) | 556, 601, 604, 1223, 1258 |
| FspBI | CTAG | 3 cut(s) | 20, 1235, 1268 |
| GlaI | GCGC | 2 cut(s) | 176, 642 |
| GluI | GCNGC | 5 cut(s) | 556, 601, 604, 1223, 1258 |
| GsaI | CCCAGC | 1 cut(s) | 697 |
| GsuI | CTGGAG | 3 cut(s) | 48, 806, 1061 |
| HaeIII | GGCC | 3 cut(s) | 89, 1713, 1838 |
| HapII | CCGG | 2 cut(s) | 37, 1490 |
| HgaI | GACGC | 1 cut(s) | 166 |
| HhaI | GCGC | 2 cut(s) | 177, 643 |
| Hin1II | CATG | 4 cut(s) | 1230, 1256, 1757, 2155 |
| Hin6I | GCGC | 2 cut(s) | 175, 641 |
| HinP1I | GCGC | 2 cut(s) | 175, 641 |
| HincII | GTYRAC | 2 cut(s) | 46, 1327 |
| HindII | GTYRAC | 2 cut(s) | 46, 1327 |
| HindIII | AAGCTT | 4 cut(s) | 371, 503, 1550, 2089 |
| HpaII | CCGG | 2 cut(s) | 37, 1490 |
| HphI | GGTGA | 1 cut(s) | 1930 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 1327, 1388 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 1327, 1388 |
| Hpy99I | CGWCG | 1 cut(s) | 139 |
| HpyCH4III | ACNGT | 4 cut(s) | 32, 1004, 1276, 1912 |
| HpyCH4IV | ACGT | 5 cut(s) | 238, 527, 1262, 1447, 2148 |
| HpyF3I | CTNAG | 9 cut(s) | 11, 84, 101, 248, 383, 445, 1418, 2043, 2069 |
| HpySE526I | ACGT | 5 cut(s) | 238, 527, 1262, 1447, 2148 |
| Hsp92II | CATG | 4 cut(s) | 1230, 1256, 1757, 2155 |
| HspAI | GCGC | 2 cut(s) | 175, 641 |
| Ksp22I | TGATCA | 3 cut(s) | 858, 924, 1188 |
| LguI | GCTCTTC | 1 cut(s) | 528 |
| LmnI | GCTCC | 4 cut(s) | 228, 404, 582, 1392 |
| Lsp1109I | GCAGC | 4 cut(s) | 567, 587, 1209, 1244 |
| LweI | GCATC | 4 cut(s) | 414, 1399, 1451, 1838 |
| MaeI | CTAG | 3 cut(s) | 20, 1235, 1268 |
| MaeII | ACGT | 5 cut(s) | 238, 527, 1262, 1447, 2148 |
| MaeIII | GTNAC | 4 cut(s) | 251, 1263, 1586, 1691 |
| MbiI | CCGCTC | 1 cut(s) | 606 |
| MfeI | CAATTG | 1 cut(s) | 1192 |
| MflI | RGATCY | 1 cut(s) | 22 |
| MhlI | GDGCHC | 2 cut(s) | 264, 1390 |
| Mph1103I | ATGCAT | 1 cut(s) | 1601 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1785 |
| MseI | TTAA | 4 cut(s) | 93, 522, 540, 1245 |
| MspCI | CTTAAG | 1 cut(s) | 539 |
| MspI | CCGG | 2 cut(s) | 37, 1490 |
| MspR9I | CCNGG | 7 cut(s) | 37, 38, 66, 266, 429, 1049, 1491 |
| MunI | CAATTG | 1 cut(s) | 1192 |
| MvaI | CCWGG | 4 cut(s) | 66, 266, 429, 1049 |
| MvnI | CGCG | 1 cut(s) | 177 |
| NciI | CCSGG | 3 cut(s) | 37, 38, 1491 |
| NcoI | CCATGG | 1 cut(s) | 1226 |
| NdeI | CATATG | 1 cut(s) | 171 |
| NlaIII | CATG | 4 cut(s) | 1230, 1256, 1757, 2155 |
| NlaIV | GGNNCC | 1 cut(s) | 2001 |
| NmuCI | GTSAC | 2 cut(s) | 1263, 1691 |
| NsiI | ATGCAT | 1 cut(s) | 1601 |
| PaeR7I | CTCGAG | 2 cut(s) | 302, 497 |
| PceI | AGGCCT | 2 cut(s) | 1713, 1838 |
| PciSI | GCTCTTC | 1 cut(s) | 528 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1785 |
| PfeI | GAWTC | 1 cut(s) | 361 |
| PfoI | TCCNGGA | 1 cut(s) | 1489 |
| PkrI | GCNGC | 5 cut(s) | 557, 602, 605, 1224, 1259 |
| PmaCI | CACGTG | 1 cut(s) | 528 |
| PmlI | CACGTG | 1 cut(s) | 528 |
| Ppu21I | YACGTR | 1 cut(s) | 528 |
| Psp6I | CCWGG | 4 cut(s) | 64, 264, 427, 1047 |
| PspCI | CACGTG | 1 cut(s) | 528 |
| PspFI | CCCAGC | 1 cut(s) | 693 |
| PspGI | CCWGG | 4 cut(s) | 64, 264, 427, 1047 |
| PspN4I | GGNNCC | 1 cut(s) | 2001 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PstI | CTGCAG | 1 cut(s) | 987 |
| PsuI | RGATCY | 1 cut(s) | 22 |
| RsaI | GTAC | 4 cut(s) | 34, 656, 1046, 1471 |
| RsaNI | GTAC | 4 cut(s) | 33, 655, 1045, 1470 |
| SapI | GCTCTTC | 1 cut(s) | 528 |
| SaqAI | TTAA | 4 cut(s) | 93, 522, 540, 1245 |
| SatI | GCNGC | 5 cut(s) | 556, 601, 604, 1223, 1258 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 7 cut(s) | 37, 38, 66, 266, 429, 1049, 1491 |
| SduI | GDGCHC | 2 cut(s) | 264, 1390 |
| SfaNI | GCATC | 4 cut(s) | 414, 1399, 1451, 1838 |
| SfcI | CTRYAG | 1 cut(s) | 983 |
| Sfr274I | CTCGAG | 2 cut(s) | 302, 497 |
| SlaI | CTCGAG | 2 cut(s) | 302, 497 |
| SmaI | CCCGGG | 1 cut(s) | 38 |
| SseBI | AGGCCT | 2 cut(s) | 1713, 1838 |
| SsiI | CCGC | 2 cut(s) | 604, 2053 |
| SspI | AATATT | 1 cut(s) | 1480 |
| SspMI | CTAG | 3 cut(s) | 20, 1235, 1268 |
| StuI | AGGCCT | 2 cut(s) | 1713, 1838 |
| StyD4I | CCNGG | 7 cut(s) | 35, 36, 64, 264, 427, 1047, 1489 |
| StyI | CCWWGG | 2 cut(s) | 316, 1226 |
| TaaI | ACNGT | 4 cut(s) | 32, 1004, 1276, 1912 |
| TaiI | ACGT | 5 cut(s) | 241, 530, 1265, 1450, 2151 |
| TatI | WGTACW | 1 cut(s) | 654 |
| TauI | GCSGC | 1 cut(s) | 606 |
| TfiI | GAWTC | 1 cut(s) | 361 |
| Tru1I | TTAA | 4 cut(s) | 93, 522, 540, 1245 |
| Tru9I | TTAA | 4 cut(s) | 93, 522, 540, 1245 |
| TscAI | CASTG | 2 cut(s) | 1915, 2077 |
| TseFI | GTSAC | 2 cut(s) | 1263, 1691 |
| TseI | GCWGC | 4 cut(s) | 555, 600, 1222, 1257 |
| Tsp45I | GTSAC | 2 cut(s) | 1263, 1691 |
| TspGWI | ACGGA | 1 cut(s) | 1405 |
| TspMI | CCCGGG | 1 cut(s) | 36 |
| TspRI | CASTG | 2 cut(s) | 1915, 2077 |
| Vha464I | CTTAAG | 1 cut(s) | 539 |
| VneI | GTGCAC | 1 cut(s) | 1386 |
| XapI | RAATTY | 6 cut(s) | 309, 411, 571, 1340, 1500, 1781 |
| XbaI | TCTAGA | 1 cut(s) | 1234 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 701 |
| XhoI | CTCGAG | 2 cut(s) | 302, 497 |
| XmaI | CCCGGG | 1 cut(s) | 36 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1785 |
| XspI | CTAG | 3 cut(s) | 20, 1235, 1268 |
| Zsp2I | ATGCAT | 1 cut(s) | 1601 |