MD04G1036000.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
4032926 .. 4034276
1351 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1036000.v1.1.491

Sequence Viewer

Length: 657 bp
ATGGAGTGCATCATGACTATCTTGCAGATTTGCTGCAGATCGTTAACATTTTCTTCTCCTTCATCTGCTGCACCTGCTGCTGCTGGTGACGATGATCATGATGGTATTGAATCGTTAACTTTTTCTCCGTCATCTGCTGCGGCTGCTGGTGGTGGTGGTGATGATCATGATGGTATTGAAGCTAATATCCCCCCTCGTCGGGAAAATTATGATGTGTTTATCAATTTCCGAGGTGAGGACACCCGCCTTGGTATTACCAGCCATCTTCATGCTGCCTTACTTCAGAAAAAAATTGAAACCTACATAGATTACAGACTTCAGAAGGGAGAAGAAATCGGACCTGCCCTTCTAGAGGCAATCGAGAAATCCACGCTTTCGGTGATCATTTTCTCACAAAACTATGCTTCTTCCACATGGTGTTTGGATGAGCTTGTGCATATACTCGAATGCAAGGTAAGATATGGCCAGATGGCTATACCTGTATTCTACGACATCAATCCATCTGATGTACGAAAACAACACGGGAGTTATGCGGTTGCATTTGCTCAACTTGAAAACCGTTTCAAGGACAATATTGATAAGGTGCGCAAGTGGAGGGATGCTTTGACGACTGCAGGCAATCTATCTGGGTTTGATTATTCAAACAAACCCGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

219

Amino Acids

24.01

Weight (kDa)

5.11

Isoelectric Point (pI)

60.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 69 - 215 1.4e-45 TIR domain
TIR_2 PF13676 72 - 191 5e-12 TIR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 82
Acc16I TGCGCA 1 cut(s) 587
Acc36I ACCTGC 2 cut(s) 82, 349
AciI CCGC 3 cut(s) 140, 244, 533
AcoI YGGCCR 1 cut(s) 463
AcuI CTGAAG 2 cut(s) 266, 302
AdeI CACNNNGTG 1 cut(s) 417
AfaI GTAC 1 cut(s) 510
AfiI CCNNNNNNNGG 5 cut(s) 198, 199, 235, 352, 565
AgsI TTSAA 6 cut(s) 110, 179, 296, 554, 565, 642
AluBI AGCT 2 cut(s) 182, 430
AluI AGCT 2 cut(s) 182, 430
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 7 cut(s) 33, 68, 77, 80, 137, 143, 272
AspLEI GCGC 1 cut(s) 588
AspS9I GGNCC 1 cut(s) 338
AsuC2I CCSGG 2 cut(s) 651, 652
AsuHPI GGTGA 4 cut(s) 98, 170, 245, 391
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 1 cut(s) 338
BalI TGGCCA 1 cut(s) 465
BbvI GCAGC 7 cut(s) 20, 55, 64, 67, 124, 130, 259
BccI CCATC 5 cut(s) 95, 164, 270, 463, 508
BclI TGATCA 3 cut(s) 94, 163, 381
BcnI CCSGG 2 cut(s) 651, 652
BfaI CTAG 1 cut(s) 350
BfmI CTRYAG 2 cut(s) 34, 612
BfuAI ACCTGC 2 cut(s) 82, 349
BisI GCNGC 8 cut(s) 34, 69, 78, 81, 138, 141, 144, 273
BlsI GCNGC 8 cut(s) 35, 70, 79, 82, 139, 142, 145, 274
Bme1390I CCNGG 2 cut(s) 651, 652
Bme18I GGWCC 1 cut(s) 338
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 1 cut(s) 338
BmrFI CCNGG 2 cut(s) 651, 652
BmsI GCATC 2 cut(s) 18, 589
BpuMI CCSGG 2 cut(s) 651, 652
BsaJI CCNNGG 3 cut(s) 229, 247, 650
BsaXI ACNNNNNCTCC 2 cut(s) 109, 139
Bsc4I CCNNNNNNNGG 5 cut(s) 198, 199, 235, 352, 565
BseDI CCNNGG 3 cut(s) 229, 247, 650
BseGI GGATG 2 cut(s) 430, 604
BseLI CCNNNNNNNGG 5 cut(s) 198, 199, 235, 352, 565
BseXI GCAGC 7 cut(s) 20, 55, 64, 67, 124, 130, 259
BsgI GTGCAG 1 cut(s) 54
BshFI GGCC 1 cut(s) 465
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 1 cut(s) 651
BslI CCNNNNNNNGG 5 cut(s) 198, 199, 235, 352, 565
BsmI GAATGC 1 cut(s) 452
BsnI GGCC 1 cut(s) 465
BsoBI CYCGRG 1 cut(s) 650
Bsp143I GATC 4 cut(s) 38, 94, 163, 381
BspACI CCGC 3 cut(s) 140, 244, 533
BspANI GGCC 1 cut(s) 465
BspHI TCATGA 3 cut(s) 12, 97, 166
BspMAI CTGCAG 2 cut(s) 38, 616
BspMI ACCTGC 2 cut(s) 82, 349
BssECI CCNNGG 3 cut(s) 229, 247, 650
BssMI GATC 4 cut(s) 38, 94, 163, 381
BssT1I CCWWGG 1 cut(s) 247
Bst4CI ACNGT 1 cut(s) 560
BstAPI GCANNNNNTGC 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 616
BstENI CCTNNNNNAGG 1 cut(s) 350
BstF5I GGATG 2 cut(s) 430, 604
BstHHI GCGC 1 cut(s) 588
BstKTI GATC 4 cut(s) 41, 97, 166, 384
BstMBI GATC 4 cut(s) 38, 94, 163, 381
BstMWI GCNNNNNNNGC 3 cut(s) 74, 77, 143
BstSCI CCNGG 2 cut(s) 649, 650
BstSFI CTRYAG 2 cut(s) 34, 612
BstV1I GCAGC 7 cut(s) 20, 55, 64, 67, 124, 130, 259
BsuRI GGCC 1 cut(s) 465
BtsCI GGATG 2 cut(s) 430, 604
BveI ACCTGC 2 cut(s) 82, 349
Cac8I GCNNGC 1 cut(s) 616
CciI TCATGA 3 cut(s) 12, 97, 166
CfoI GCGC 1 cut(s) 588
Cfr13I GGNCC 1 cut(s) 338
Cfr9I CCCGGG 1 cut(s) 650
Csp6I GTAC 1 cut(s) 509
CviAII CATG 5 cut(s) 13, 98, 167, 269, 414
CviJI RGCY 6 cut(s) 143, 182, 261, 430, 465, 473
CviKI_1 RGCY 6 cut(s) 143, 182, 261, 430, 465, 473
CviQI GTAC 1 cut(s) 509
DpnI GATC 4 cut(s) 40, 96, 165, 383
DpnII GATC 4 cut(s) 38, 94, 163, 381
DraIII CACNNNGTG 1 cut(s) 417
EaeI YGGCCR 1 cut(s) 463
Eco130I CCWWGG 1 cut(s) 247
Eco47I GGWCC 1 cut(s) 338
Eco57I CTGAAG 2 cut(s) 266, 302
Eco88I CYCGRG 1 cut(s) 650
EcoNI CCTNNNNNAGG 1 cut(s) 350
EcoT14I CCWWGG 1 cut(s) 247
ErhI CCWWGG 1 cut(s) 247
FaeI CATG 5 cut(s) 16, 101, 170, 272, 417
FatI CATG 5 cut(s) 12, 97, 166, 268, 413
FauI CCCGC 1 cut(s) 251
FbaI TGATCA 3 cut(s) 94, 163, 381
Fnu4HI GCNGC 8 cut(s) 34, 69, 78, 81, 138, 141, 144, 273
FokI GGATG 2 cut(s) 437, 611
Fsp4HI GCNGC 8 cut(s) 34, 69, 78, 81, 138, 141, 144, 273
FspBI CTAG 1 cut(s) 350
FspI TGCGCA 1 cut(s) 587
GlaI GCGC 1 cut(s) 587
GluI GCNGC 8 cut(s) 34, 69, 78, 81, 138, 141, 144, 273
HaeIII GGCC 1 cut(s) 465
HapII CCGG 1 cut(s) 651
HhaI GCGC 1 cut(s) 588
Hin1II CATG 5 cut(s) 16, 101, 170, 272, 417
Hin6I GCGC 1 cut(s) 586
HinP1I GCGC 1 cut(s) 586
HincII GTYRAC 2 cut(s) 45, 117
HindII GTYRAC 2 cut(s) 45, 117
HinfI GANTC 1 cut(s) 110
HpaI GTTAAC 2 cut(s) 45, 117
HpaII CCGG 1 cut(s) 651
HphI GGTGA 4 cut(s) 98, 170, 245, 391
Hpy166II GTNNAC 2 cut(s) 45, 117
Hpy188I TCNGA 5 cut(s) 230, 285, 321, 338, 505
Hpy188III TCNNGA 6 cut(s) 13, 98, 167, 200, 350, 361
Hpy8I GTNNAC 2 cut(s) 45, 117
Hpy99I CGWCG 1 cut(s) 201
HpyAV CCTTC 3 cut(s) 69, 316, 356
HpyCH4III ACNGT 1 cut(s) 560
HpyCH4V TGCA 8 cut(s) 9, 25, 36, 71, 436, 450, 539, 614
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 77, 143
Hsp92II CATG 5 cut(s) 16, 101, 170, 272, 417
HspAI GCGC 1 cut(s) 586
Ksp22I TGATCA 3 cut(s) 94, 163, 381
KspAI GTTAAC 2 cut(s) 45, 117
Kzo9I GATC 4 cut(s) 38, 94, 163, 381
LpnPI CCDG 9 cut(s) 69, 87, 132, 271, 354, 479, 492, 600, 612
Lsp1109I GCAGC 7 cut(s) 20, 55, 64, 67, 124, 130, 259
LweI GCATC 2 cut(s) 18, 589
MaeI CTAG 1 cut(s) 350
MaeIII GTNAC 1 cut(s) 86
MalI GATC 4 cut(s) 40, 96, 165, 383
MboI GATC 4 cut(s) 38, 94, 163, 381
MboII GAAGA 4 cut(s) 45, 257, 341, 399
MlsI TGGCCA 1 cut(s) 465
MluCI AATT 3 cut(s) 205, 223, 291
MluNI TGGCCA 1 cut(s) 465
MnlI CCTC 5 cut(s) 204, 224, 229, 346, 588
Mox20I TGGCCA 1 cut(s) 465
MscI TGGCCA 1 cut(s) 465
MseI TTAA 2 cut(s) 44, 116
MslI CAYNNNNRTG 1 cut(s) 267
Msp20I TGGCCA 1 cut(s) 465
MspI CCGG 1 cut(s) 651
MspR9I CCNGG 2 cut(s) 651, 652
Mva1269I GAATGC 1 cut(s) 452
MwoI GCNNNNNNNGC 3 cut(s) 74, 77, 143
NciI CCSGG 2 cut(s) 651, 652
NdeII GATC 4 cut(s) 38, 94, 163, 381
NlaIII CATG 5 cut(s) 16, 101, 170, 272, 417
NmuCI GTSAC 1 cut(s) 86
NsbI TGCGCA 1 cut(s) 587
PagI TCATGA 3 cut(s) 12, 97, 166
PaqCI CACCTGC 1 cut(s) 82
PctI GAATGC 1 cut(s) 452
PfeI GAWTC 1 cut(s) 110
PkrI GCNGC 8 cut(s) 35, 70, 79, 82, 139, 142, 145, 274
PspPI GGNCC 1 cut(s) 338
PstI CTGCAG 2 cut(s) 38, 616
RsaI GTAC 1 cut(s) 510
RsaNI GTAC 1 cut(s) 509
RseI CAYNNNNRTG 1 cut(s) 267
SaqAI TTAA 2 cut(s) 44, 116
SatI GCNGC 8 cut(s) 34, 69, 78, 81, 138, 141, 144, 273
Sau3AI GATC 4 cut(s) 38, 94, 163, 381
Sau96I GGNCC 1 cut(s) 338
ScrFI CCNGG 2 cut(s) 651, 652
SetI ASST 9 cut(s) 76, 184, 235, 302, 343, 432, 456, 481, 585
SfaNI GCATC 2 cut(s) 18, 589
SfcI CTRYAG 2 cut(s) 34, 612
SinI GGWCC 1 cut(s) 338
SmaI CCCGGG 1 cut(s) 652
SmiMI CAYNNNNRTG 1 cut(s) 267
Sse9I AATT 3 cut(s) 205, 223, 291
SsiI CCGC 3 cut(s) 140, 244, 533
SspI AATATT 1 cut(s) 574
SspMI CTAG 1 cut(s) 350
StyD4I CCNGG 2 cut(s) 649, 650
StyI CCWWGG 1 cut(s) 247
TaaI ACNGT 1 cut(s) 560
TaqI TCGA 2 cut(s) 360, 444
TasI AATT 3 cut(s) 205, 223, 291
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 1 cut(s) 110
Tru1I TTAA 2 cut(s) 44, 116
Tru9I TTAA 2 cut(s) 44, 116
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 7 cut(s) 33, 68, 77, 80, 137, 143, 272
Tsp45I GTSAC 1 cut(s) 86
TspDTI ATGAA 2 cut(s) 51, 257
TspGWI ACGGA 1 cut(s) 117
TspMI CCCGGG 1 cut(s) 650
VpaK11BI GGWCC 1 cut(s) 338
XagI CCTNNNNNAGG 1 cut(s) 350
XbaI TCTAGA 1 cut(s) 349
XcmI CCANNNNNNNNNTGG 1 cut(s) 418
XmaI CCCGGG 1 cut(s) 650
XspI CTAG 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.