MD05G1136700.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
26474269 .. 26476512
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1136700.v1.1.491

Sequence Viewer

Length: 1518 bp
ATGGTCGTACCGGTATTATACGACGTCAATCCATCTGATGTACGGAATCAATACGAGAGTTATGCGGATGCATTTGGACAACTTGAAAAACGTTTCGATAACAGTATTGACAAGGTGCACAAGTGGAGGGGTGCTTTGAAGACTGCAGCCAATCTATCTGGGTTTGATTATTCAAACAAATTCGGGACGGAGGCAGATCTAATTAGGAATGTTGTAGATCATATTTGGACCAAATTGATTTGTGAATCATCATGTGTTTTAGAGGGCCTGGTTGGAATTGAAAGTCACATCGAGCAAATTGAATCGCTATTAGGCATTCATTCACAGGATGCTTGCATCAGTGTTGGTATTTGGGGAATGGGTGGTATTGGCAAGACCACCCTTGCTGAAGCCGTATTTAACAAACTCTCTTCTAAATTCGAAGCTTGTTGTTTTCTAAGAAATGTTAGGGAGAAAGAACAAAAAGATGGGCTAGAACACTTACAAAATACACTTCTCAGTCAGATATCAAAGGAAGAAGATCTATCCATAGGATCAATTTTTGTTCGAGATAGGCTTAGCCGTACAAAGGTCCTCATTGTTCTTGATGATGTCAGTGATTCAATGCAAATTGAAGGTTTATCTGGCAATCGTCTTCCGTTTGGCAATGGAAGTAGAATCATCATCACAAGTAGAAATAGGGGCACACTTAGGCAAACTGTTGAAGAGGATAAAATCTATGAGGTTGGGAGATTAAAACCGGATGACGCTCTTCAGCTCTTTTGTTCGCGTGCTTTCAAGAATACTCATATAACAGATTATAAGGGGTTGGCAGAAAAGGCGATGCATTATGCCGGAGGCATTCCTTTAGCTCTTATACTTCTGGGGTCCTCATTCCTAAATTGCAAGAGCAAAGAAGACTTGGAAGATGAATTGGACAAATTGAAACAATTTCCCAATGAAAATATCCAGAGAGTGTTGAGACTAAGTTATGATGGATTGGGAAGAAATGAGAAGGAGATATTTTTGGATATAGCATGTTTTCATGAAGGGTATGATGTGGAGGAGGTAAAGCAATTGTTAGATGTTCGTGGATTCTTTGTGACGGTTGGAATTAGAATTCTCATTGACATGTCTCTCATATCAATTGATTCAAGATGGGGACGGGAAACCATCGAGATGCATGATCTACTTGAAGAAATGGGAAGGACAATTGTTCAGGAACAATGTATTGAAGATCCCAGAAATATTGAAGCCATATTCCTTAATTGGCATAACATTGTAGAGCGACCATTGAAACGTGTAGACTTCAAGGTGATGTCTAACCTAAGATTGCTAATTGTGAATGGTGGCTCCAAATTCCACGCTTCTCTAGACCTTCCCGATGCTCTTCGTTATCTTTACTGGGATGAATATCCACTGGAATCTTTACCGTCAAAATTTTCTCCGAAAAATCTAGTTGAGCTTCATATGCCATTTAGCCTAGTTCAGAAGCTTTGGAAAAAAGACAAGGTATATTATATTATATGCCTATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

506

Amino Acids

57.68

Weight (kDa)

5.53

Isoelectric Point (pI)

52.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 92 7.5e-11 TIR domain
NB-ARC PF00931 94 - 262 7.1e-22 NB-ARC domain
NACHT PF05729 117 - 255 6.4e-07 NACHT domain
WHD_ROQ1 PF23282 330 - 402 2.1e-19 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 801
AatII GACGTC 1 cut(s) 27
AccI GTMKAC 1 cut(s) 1284
AccII CGCG 1 cut(s) 769
AciI CCGC 1 cut(s) 65
AclI AACGTT 1 cut(s) 91
AclWI GGATC 2 cut(s) 541, 1211
AcsI RAATTY 5 cut(s) 179, 416, 1098, 1337, 1418
AcuI CTGAAG 2 cut(s) 408, 737
AcyI GRCGYC 1 cut(s) 24
AfaI GTAC 3 cut(s) 9, 42, 565
AfiI CCNNNNNNNGG 1 cut(s) 568
AflIII ACRYGT 2 cut(s) 1110, 1279
AgeI ACCGGT 1 cut(s) 10
AjnI CCWGG 1 cut(s) 267
AluBI AGCT 5 cut(s) 425, 757, 851, 1444, 1474
AluI AGCT 5 cut(s) 425, 757, 851, 1444, 1474
Alw21I GWGCWC 1 cut(s) 120
Alw26I GTCTC 2 cut(s) 955, 1119
Alw44I GTGCAC 1 cut(s) 116
AlwI GGATC 2 cut(s) 541, 1211
AoxI GGCC 1 cut(s) 265
ApaLI GTGCAC 1 cut(s) 116
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 5 cut(s) 179, 416, 1098, 1337, 1418
AsiGI ACCGGT 1 cut(s) 10
AspS9I GGNCC 4 cut(s) 228, 265, 571, 867
AsuHPI GGTGA 1 cut(s) 1306
AsuII TTCGAA 1 cut(s) 420
AvaII GGWCC 3 cut(s) 228, 571, 867
BaeGI GKGCMC 2 cut(s) 120, 686
BbsI GAAGAC 3 cut(s) 146, 626, 903
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 158
BccI CCATC 5 cut(s) 40, 461, 968, 1131, 1160
BceAI ACGGC 2 cut(s) 377, 546
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BciT130I CCWGG 1 cut(s) 269
BcoDI GTCTC 2 cut(s) 955, 1119
BfaI CTAG 4 cut(s) 473, 1352, 1436, 1463
BfmI CTRYAG 1 cut(s) 144
BglII AGATCT 2 cut(s) 196, 520
BisI GCNGC 1 cut(s) 147
BlpI GCTNAGC 1 cut(s) 557
BlsI GCNGC 1 cut(s) 148
Bme1390I CCNGG 1 cut(s) 269
Bme18I GGWCC 3 cut(s) 228, 571, 867
BmgT120I GGNCC 4 cut(s) 228, 265, 571, 867
BmiI GGNNCC 2 cut(s) 868, 1333
BmrFI CCNGG 1 cut(s) 269
BmrI ACTGGG 1 cut(s) 1393
BmsI GCATC 6 cut(s) 58, 319, 345, 813, 1149, 1354
BmuI ACTGGG 1 cut(s) 1393
BpiI GAAGAC 3 cut(s) 146, 626, 903
Bpu1102I GCTNAGC 1 cut(s) 557
Bpu14I TTCGAA 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 24
BsaWI WCCGGW 2 cut(s) 10, 739
Bsc4I CCNNNNNNNGG 1 cut(s) 568
Bse118I RCCGGY 1 cut(s) 10
Bse1I ACTGG 2 cut(s) 1388, 1404
Bse3DI GCAATG 1 cut(s) 652
Bse8I GATNNNNATC 1 cut(s) 1392
BseBI CCWGG 1 cut(s) 269
BseGI GGATG 4 cut(s) 73, 334, 748, 1393
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 1 cut(s) 568
BseMI GCAATG 1 cut(s) 652
BseMII CTCAG 1 cut(s) 511
BseNI ACTGG 2 cut(s) 1388, 1404
BseRI GAGGAG 1 cut(s) 1058
BseSI GKGCMC 2 cut(s) 120, 686
BseXI GCAGC 1 cut(s) 158
Bsh1236I CGCG 1 cut(s) 769
BshFI GGCC 1 cut(s) 267
BshTI ACCGGT 1 cut(s) 10
BsiHKAI GWGCWC 1 cut(s) 120
BsiSI CCGG 3 cut(s) 11, 740, 834
BslFI GGGAC 2 cut(s) 199, 1155
BslI CCNNNNNNNGG 1 cut(s) 568
BsmAI GTCTC 2 cut(s) 955, 1119
BsmFI GGGAC 2 cut(s) 199, 1155
BsmI GAATGC 2 cut(s) 315, 840
BsnI GGCC 1 cut(s) 267
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 120, 686
Bsp143I GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
Bsp1720I GCTNAGC 1 cut(s) 557
BspACI CCGC 1 cut(s) 65
BspANI GGCC 1 cut(s) 267
BspCNI CTCAG 1 cut(s) 510
BspFNI CGCG 1 cut(s) 769
BspHI TCATGA 1 cut(s) 1024
BspLI GGNNCC 2 cut(s) 868, 1333
BspMAI CTGCAG 1 cut(s) 148
BspPI GGATC 2 cut(s) 541, 1211
BspQI GCTCTTC 2 cut(s) 756, 1374
BspT104I TTCGAA 1 cut(s) 420
BsrDI GCAATG 1 cut(s) 652
BsrFI RCCGGY 1 cut(s) 10
BsrI ACTGG 2 cut(s) 1388, 1404
BssAI RCCGGY 1 cut(s) 10
BssMI GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
BssNI GRCGYC 1 cut(s) 24
Bst2UI CCWGG 1 cut(s) 269
Bst4CI ACNGT 4 cut(s) 104, 700, 1087, 1413
Bst6I CTCTTC 4 cut(s) 415, 699, 756, 1374
BstACI GRCGYC 1 cut(s) 24
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 2 cut(s) 334, 771
BstDEI CTNAG 6 cut(s) 437, 497, 557, 689, 965, 1307
BstF5I GGATG 4 cut(s) 73, 334, 748, 1393
BstFNI CGCG 1 cut(s) 769
BstKTI GATC 6 cut(s) 199, 220, 523, 536, 1168, 1219
BstMAI GTCTC 2 cut(s) 955, 1119
BstMBI GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 818, 1450
BstNI CCWGG 1 cut(s) 269
BstNSI RCATGY 2 cut(s) 1020, 1114
BstSCI CCNGG 1 cut(s) 267
BstSFI CTRYAG 1 cut(s) 144
BstSLI GKGCMC 2 cut(s) 120, 686
BstUI CGCG 1 cut(s) 769
BstV1I GCAGC 1 cut(s) 158
BstV2I GAAGAC 3 cut(s) 146, 626, 903
BstX2I RGATCY 3 cut(s) 196, 520, 1216
BstYI RGATCY 3 cut(s) 196, 520, 1216
BsuRI GGCC 1 cut(s) 267
BtgZI GCGATG 1 cut(s) 836
BtsCI GGATG 4 cut(s) 73, 334, 748, 1393
BtsIMutI CAGTG 3 cut(s) 346, 601, 1397
Cac8I GCNNGC 2 cut(s) 334, 771
CciI TCATGA 1 cut(s) 1024
Cfr10I RCCGGY 1 cut(s) 10
Cfr13I GGNCC 4 cut(s) 228, 265, 571, 867
CseI GACGC 1 cut(s) 755
Csp6I GTAC 3 cut(s) 8, 41, 564
CspAI ACCGGT 1 cut(s) 10
CviAII CATG 5 cut(s) 252, 1017, 1025, 1111, 1163
CviQI GTAC 3 cut(s) 8, 41, 564
DdeI CTNAG 6 cut(s) 437, 497, 557, 689, 965, 1307
DpnI GATC 6 cut(s) 198, 219, 522, 535, 1167, 1218
DpnII GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
Eam1104I CTCTTC 4 cut(s) 415, 699, 756, 1374
EarI CTCTTC 4 cut(s) 415, 699, 756, 1374
Eco32I GATATC 1 cut(s) 507
Eco47I GGWCC 3 cut(s) 228, 571, 867
Eco57I CTGAAG 2 cut(s) 408, 737
EcoO109I RGGNCCY 3 cut(s) 265, 571, 867
EcoRI GAATTC 1 cut(s) 1098
EcoRII CCWGG 1 cut(s) 267
EcoRV GATATC 1 cut(s) 507
EcoT22I ATGCAT 3 cut(s) 73, 828, 1164
FaeI CATG 5 cut(s) 255, 1020, 1028, 1114, 1166
FaqI GGGAC 2 cut(s) 199, 1155
FatI CATG 5 cut(s) 251, 1016, 1024, 1110, 1162
FauNDI CATATG 1 cut(s) 1449
FblI GTMKAC 1 cut(s) 1284
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 4 cut(s) 80, 341, 755, 1400
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 4 cut(s) 473, 1352, 1436, 1463
GluI GCNGC 1 cut(s) 147
HaeIII GGCC 1 cut(s) 267
HapII CCGG 3 cut(s) 11, 740, 834
HgaI GACGC 1 cut(s) 755
Hin1I GRCGYC 1 cut(s) 24
Hin1II CATG 5 cut(s) 255, 1020, 1028, 1114, 1166
HindIII AAGCTT 2 cut(s) 423, 1472
HinfI GANTC 8 cut(s) 46, 245, 302, 599, 657, 1074, 1130, 1403
HpaII CCGG 3 cut(s) 11, 740, 834
HphI GGTGA 1 cut(s) 1306
Hpy166II GTNNAC 2 cut(s) 118, 1285
Hpy188I TCNGA 4 cut(s) 37, 504, 1428, 1470
Hpy8I GTNNAC 2 cut(s) 118, 1285
Hpy99I CGWCG 1 cut(s) 26
HpyAV CCTTC 5 cut(s) 608, 988, 1022, 1179, 1367
HpyCH4III ACNGT 4 cut(s) 104, 700, 1087, 1413
HpyCH4IV ACGT 3 cut(s) 24, 91, 1279
HpyCH4V TGCA 8 cut(s) 71, 118, 146, 336, 607, 826, 885, 1162
HpyF10VI GCNNNNNNNGC 2 cut(s) 818, 1450
HpyF3I CTNAG 6 cut(s) 437, 497, 557, 689, 965, 1307
HpySE526I ACGT 3 cut(s) 24, 91, 1279
Hsp92I GRCGYC 1 cut(s) 24
Hsp92II CATG 5 cut(s) 255, 1020, 1028, 1114, 1166
Kzo9I GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
LguI GCTCTTC 2 cut(s) 756, 1374
LmnI GCTCC 1 cut(s) 1337
Lsp1109I GCAGC 1 cut(s) 158
LweI GCATC 6 cut(s) 58, 319, 345, 813, 1149, 1354
MaeI CTAG 4 cut(s) 473, 1352, 1436, 1463
MaeII ACGT 3 cut(s) 24, 91, 1279
MaeIII GTNAC 2 cut(s) 284, 1081
MalI GATC 6 cut(s) 198, 219, 522, 535, 1167, 1218
MboI GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
MfeI CAATTG 3 cut(s) 1055, 1125, 1191
MflI RGATCY 3 cut(s) 196, 520, 1216
MhlI GDGCHC 2 cut(s) 120, 686
MmeI TCCRAC 2 cut(s) 253, 1069
Mph1103I ATGCAT 3 cut(s) 73, 828, 1164
MseI TTAA 4 cut(s) 399, 734, 1245, 1516
MslI CAYNNNNRTG 2 cut(s) 1109, 1157
MspI CCGG 3 cut(s) 11, 740, 834
MspR9I CCNGG 1 cut(s) 269
MunI CAATTG 3 cut(s) 1055, 1125, 1191
Mva1269I GAATGC 2 cut(s) 315, 840
MvaI CCWGG 1 cut(s) 269
MvnI CGCG 1 cut(s) 769
MwoI GCNNNNNNNGC 2 cut(s) 818, 1450
NdeI CATATG 1 cut(s) 1449
NdeII GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
NlaIII CATG 5 cut(s) 255, 1020, 1028, 1114, 1166
NlaIV GGNNCC 2 cut(s) 868, 1333
NmuCI GTSAC 2 cut(s) 284, 1081
NsiI ATGCAT 3 cut(s) 73, 828, 1164
NspI RCATGY 2 cut(s) 1020, 1114
NspV TTCGAA 1 cut(s) 420
PagI TCATGA 1 cut(s) 1024
PciI ACATGT 1 cut(s) 1110
PciSI GCTCTTC 2 cut(s) 756, 1374
PctI GAATGC 2 cut(s) 315, 840
PfeI GAWTC 8 cut(s) 46, 245, 302, 599, 657, 1074, 1130, 1403
PinAI ACCGGT 1 cut(s) 10
PkrI GCNGC 1 cut(s) 148
PpuMI RGGWCCY 2 cut(s) 571, 867
PscI ACATGT 1 cut(s) 1110
PsiI TTATAA 1 cut(s) 801
Psp1406I AACGTT 1 cut(s) 91
Psp5II RGGWCCY 2 cut(s) 571, 867
Psp6I CCWGG 1 cut(s) 267
PspGI CCWGG 1 cut(s) 267
PspN4I GGNNCC 2 cut(s) 868, 1333
PspPI GGNCC 4 cut(s) 228, 265, 571, 867
PspPPI RGGWCCY 2 cut(s) 571, 867
PstI CTGCAG 1 cut(s) 148
PsuI RGATCY 3 cut(s) 196, 520, 1216
RsaI GTAC 3 cut(s) 9, 42, 565
RsaNI GTAC 3 cut(s) 8, 41, 564
RseI CAYNNNNRTG 2 cut(s) 1109, 1157
SapI GCTCTTC 2 cut(s) 756, 1374
SaqAI TTAA 4 cut(s) 399, 734, 1245, 1516
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 6 cut(s) 196, 217, 520, 533, 1165, 1216
Sau96I GGNCC 4 cut(s) 228, 265, 571, 867
ScrFI CCNGG 1 cut(s) 269
SduI GDGCHC 2 cut(s) 120, 686
SfaNI GCATC 6 cut(s) 58, 319, 345, 813, 1149, 1354
SfcI CTRYAG 1 cut(s) 144
SfuI TTCGAA 1 cut(s) 420
SinI GGWCC 3 cut(s) 228, 571, 867
SmiMI CAYNNNNRTG 2 cut(s) 1109, 1157
SsiI CCGC 1 cut(s) 65
SspI AATATT 1 cut(s) 1228
SspMI CTAG 4 cut(s) 473, 1352, 1436, 1463
StyD4I CCNGG 1 cut(s) 267
TaaI ACNGT 4 cut(s) 104, 700, 1087, 1413
TaiI ACGT 3 cut(s) 27, 94, 1282
TaqI TCGA 5 cut(s) 96, 291, 420, 547, 1155
TfiI GAWTC 8 cut(s) 46, 245, 302, 599, 657, 1074, 1130, 1403
Tru1I TTAA 4 cut(s) 399, 734, 1245, 1516
Tru9I TTAA 4 cut(s) 399, 734, 1245, 1516
TscAI CASTG 3 cut(s) 346, 601, 1404
TseFI GTSAC 2 cut(s) 284, 1081
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 2 cut(s) 284, 1081
TspDTI ATGAA 7 cut(s) 308, 924, 954, 1013, 1041, 1404, 1436
TspGWI ACGGA 3 cut(s) 58, 203, 627
TspRI CASTG 3 cut(s) 346, 601, 1404
VneI GTGCAC 1 cut(s) 116
VpaK11BI GGWCC 3 cut(s) 228, 571, 867
XapI RAATTY 5 cut(s) 179, 416, 1098, 1337, 1418
XbaI TCTAGA 1 cut(s) 1351
XceI RCATGY 2 cut(s) 1020, 1114
XmiI GTMKAC 1 cut(s) 1284
XspI CTAG 4 cut(s) 473, 1352, 1436, 1463
ZraI GACGTC 1 cut(s) 25
Zsp2I ATGCAT 3 cut(s) 73, 828, 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.