TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C-JID | PF20160 | 443 - 597 | 2.5e-15 | C-JID domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1205 |
| Acc36I | ACCTGC | 1 cut(s) | 413 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 367 |
| AccII | CGCG | 1 cut(s) | 1638 |
| AciI | CCGC | 1 cut(s) | 1740 |
| AclWI | GGATC | 5 cut(s) | 48, 847, 913, 1152, 1230 |
| AcoI | YGGCCR | 1 cut(s) | 1600 |
| AcsI | RAATTY | 6 cut(s) | 513, 673, 1341, 1384, 1474, 1607 |
| AcuI | CTGAAG | 5 cut(s) | 30, 234, 824, 890, 1185 |
| AfaI | GTAC | 3 cut(s) | 7, 134, 1627 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 367, 373, 1136, 1746 |
| AflII | CTTAAG | 2 cut(s) | 641, 689 |
| AjiI | CACGTC | 2 cut(s) | 1092, 1292 |
| AjnI | CCWGG | 5 cut(s) | 137, 166, 366, 529, 1468 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1884, 1916, 1983, 2015 |
| Alw21I | GWGCWC | 6 cut(s) | 792, 858, 924, 990, 1234, 1587 |
| Alw44I | GTGCAC | 1 cut(s) | 1230 |
| AlwI | GGATC | 5 cut(s) | 48, 847, 913, 1152, 1230 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 367, 943, 1009 |
| Ama87I | CYCGRG | 2 cut(s) | 404, 599 |
| AoxI | GGCC | 3 cut(s) | 189, 1175, 1600 |
| ApaLI | GTGCAC | 1 cut(s) | 1230 |
| ApeKI | GCWGC | 7 cut(s) | 68, 657, 702, 934, 1000, 1051, 1086 |
| ApoI | RAATTY | 6 cut(s) | 513, 673, 1341, 1384, 1474, 1607 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1611 |
| AspS9I | GGNCC | 2 cut(s) | 190, 1236 |
| AsuC2I | CCSGG | 1 cut(s) | 1332 |
| AsuHPI | GGTGA | 1 cut(s) | 1762 |
| AsuII | TTCGAA | 1 cut(s) | 78 |
| AvaI | CYCGRG | 2 cut(s) | 404, 599 |
| AvaII | GGWCC | 1 cut(s) | 1236 |
| AxyI | CCTNAGG | 1 cut(s) | 186 |
| BaeGI | GKGCMC | 2 cut(s) | 159, 1234 |
| BanII | GRGCYC | 4 cut(s) | 792, 858, 924, 990 |
| BauI | CACGAG | 1 cut(s) | 1586 |
| BbsI | GAAGAC | 1 cut(s) | 614 |
| Bbv12I | GWGCWC | 6 cut(s) | 792, 858, 924, 990, 1234, 1587 |
| BbvCI | CCTCAGC | 2 cut(s) | 372, 737 |
| BbvI | GCAGC | 7 cut(s) | 55, 669, 689, 921, 987, 1038, 1073 |
| BccI | CCATC | 2 cut(s) | 244, 495 |
| BceAI | ACGGC | 2 cut(s) | 1039, 1587 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 974, 1008 |
| BciT130I | CCWGG | 5 cut(s) | 139, 168, 368, 531, 1470 |
| BcnI | CCSGG | 1 cut(s) | 1332 |
| BfaI | CTAG | 3 cut(s) | 104, 1097, 1308 |
| BfmI | CTRYAG | 3 cut(s) | 491, 935, 1001 |
| BfrI | CTTAAG | 2 cut(s) | 641, 689 |
| BfuAI | ACCTGC | 1 cut(s) | 413 |
| BglII | AGATCT | 1 cut(s) | 382 |
| BisI | GCNGC | 7 cut(s) | 69, 658, 703, 935, 1001, 1052, 1087 |
| BlsI | GCNGC | 7 cut(s) | 70, 659, 704, 936, 1002, 1053, 1088 |
| Bme1390I | CCNGG | 6 cut(s) | 139, 168, 368, 531, 1332, 1470 |
| Bme18I | GGWCC | 1 cut(s) | 1236 |
| BmeT110I | CYCGRG | 2 cut(s) | 404, 599 |
| BmgBI | CACGTC | 2 cut(s) | 1092, 1292 |
| BmgT120I | GGNCC | 2 cut(s) | 190, 1236 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BmrFI | CCNGG | 6 cut(s) | 139, 168, 368, 531, 1332, 1470 |
| BpiI | GAAGAC | 1 cut(s) | 614 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1091, 1123 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| Bpu10I | CCTNAGC | 2 cut(s) | 372, 737 |
| Bpu14I | TTCGAA | 1 cut(s) | 78 |
| BpuEI | CTTGAG | 5 cut(s) | 311, 734, 838, 1036, 1093 |
| BpuMI | CCSGG | 1 cut(s) | 1332 |
| Bsa29I | ATCGAT | 2 cut(s) | 345, 1497 |
| BsaAI | YACGTR | 1 cut(s) | 61 |
| BsaI | GGTCTC | 1 cut(s) | 600 |
| BsaJI | CCNNGG | 5 cut(s) | 138, 1055, 1423, 1469, 1659 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 367, 373, 1136, 1746 |
| Bse1I | ACTGG | 4 cut(s) | 750, 882, 948, 1014 |
| Bse21I | CCTNAGG | 1 cut(s) | 186 |
| BseBI | CCWGG | 5 cut(s) | 139, 168, 368, 531, 1470 |
| BseCI | ATCGAT | 2 cut(s) | 345, 1497 |
| BseDI | CCNNGG | 5 cut(s) | 138, 1055, 1423, 1469, 1659 |
| BseGI | GGATG | 8 cut(s) | 71, 1081, 1359, 1379, 1451, 1540, 1655, 2031 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 367, 373, 1136, 1746 |
| BseMII | CTCAG | 4 cut(s) | 177, 194, 363, 728 |
| BseNI | ACTGG | 4 cut(s) | 750, 882, 948, 1014 |
| BseRI | GAGGAG | 2 cut(s) | 1286, 1389 |
| BseSI | GKGCMC | 2 cut(s) | 159, 1234 |
| BseX3I | CGGCCG | 1 cut(s) | 1600 |
| BseXI | GCAGC | 7 cut(s) | 55, 669, 689, 921, 987, 1038, 1073 |
| BseYI | CCCAGC | 2 cut(s) | 360, 995 |
| BsgI | GTGCAG | 3 cut(s) | 335, 1072, 1110 |
| Bsh1236I | CGCG | 1 cut(s) | 1638 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1603 |
| BshFI | GGCC | 3 cut(s) | 191, 1177, 1602 |
| BshVI | ATCGAT | 2 cut(s) | 345, 1497 |
| BsiEI | CGRYCG | 1 cut(s) | 1603 |
| BsiHKAI | GWGCWC | 6 cut(s) | 792, 858, 924, 990, 1234, 1587 |
| BsiHKCI | CYCGRG | 2 cut(s) | 404, 599 |
| BsiSI | CCGG | 1 cut(s) | 1331 |
| BslFI | GGGAC | 1 cut(s) | 131 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 367, 373, 1136, 1746 |
| BsmBI | CGTCTC | 2 cut(s) | 488, 1298 |
| BsmFI | GGGAC | 1 cut(s) | 131 |
| BsmI | GAATGC | 1 cut(s) | 70 |
| BsnI | GGCC | 3 cut(s) | 191, 1177, 1602 |
| Bso31I | GGTCTC | 1 cut(s) | 600 |
| BsoBI | CYCGRG | 2 cut(s) | 404, 599 |
| Bsp119I | TTCGAA | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 7 cut(s) | 159, 792, 858, 924, 990, 1234, 1587 |
| Bsp68I | TCGCGA | 1 cut(s) | 1638 |
| BspACI | CCGC | 1 cut(s) | 1740 |
| BspANI | GGCC | 3 cut(s) | 191, 1177, 1602 |
| BspCNI | CTCAG | 4 cut(s) | 178, 195, 364, 729 |
| BspDI | ATCGAT | 2 cut(s) | 345, 1497 |
| BspFNI | CGCG | 1 cut(s) | 1638 |
| BspHI | TCATGA | 1 cut(s) | 30 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BspMAI | CTGCAG | 3 cut(s) | 495, 939, 1005 |
| BspMI | ACCTGC | 1 cut(s) | 413 |
| BspPI | GGATC | 5 cut(s) | 48, 847, 913, 1152, 1230 |
| BspT104I | TTCGAA | 1 cut(s) | 78 |
| BspTI | CTTAAG | 2 cut(s) | 641, 689 |
| BspTNI | GGTCTC | 1 cut(s) | 600 |
| BsrI | ACTGG | 4 cut(s) | 750, 882, 948, 1014 |
| BssECI | CCNNGG | 5 cut(s) | 138, 1055, 1423, 1469, 1659 |
| BssSI | CACGAG | 1 cut(s) | 1586 |
| Bst2BI | CACGAG | 1 cut(s) | 1586 |
| Bst2UI | CCWGG | 5 cut(s) | 139, 168, 368, 531, 1470 |
| Bst4CI | ACNGT | 2 cut(s) | 1105, 1184 |
| Bst6I | CTCTTC | 2 cut(s) | 800, 866 |
| BstAFI | CTTAAG | 2 cut(s) | 641, 689 |
| BstBAI | YACGTR | 1 cut(s) | 61 |
| BstBI | TTCGAA | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 1 cut(s) | 314 |
| BstDEI | CTNAG | 8 cut(s) | 95, 186, 203, 350, 372, 737, 949, 1262 |
| BstDSI | CCRYGG | 1 cut(s) | 1055 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 371 |
| BstF5I | GGATG | 8 cut(s) | 71, 1081, 1359, 1379, 1451, 1540, 1655, 2031 |
| BstFNI | CGCG | 1 cut(s) | 1638 |
| BstMCI | CGRYCG | 1 cut(s) | 1603 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 274, 676, 787, 985, 1057 |
| BstNI | CCWGG | 5 cut(s) | 139, 168, 368, 531, 1470 |
| BstSCI | CCNGG | 6 cut(s) | 137, 166, 366, 529, 1330, 1468 |
| BstSFI | CTRYAG | 3 cut(s) | 491, 935, 1001 |
| BstSLI | GKGCMC | 2 cut(s) | 159, 1234 |
| BstUI | CGCG | 1 cut(s) | 1638 |
| BstV1I | GCAGC | 7 cut(s) | 55, 669, 689, 921, 987, 1038, 1073 |
| BstV2I | GAAGAC | 1 cut(s) | 614 |
| BstX2I | RGATCY | 4 cut(s) | 40, 382, 839, 905 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1246 |
| BstYI | RGATCY | 4 cut(s) | 40, 382, 839, 905 |
| BstZI | CGGCCG | 1 cut(s) | 1600 |
| Bsu15I | ATCGAT | 2 cut(s) | 345, 1497 |
| Bsu36I | CCTNAGG | 1 cut(s) | 186 |
| BsuRI | GGCC | 3 cut(s) | 191, 1177, 1602 |
| BsuTUI | ATCGAT | 2 cut(s) | 345, 1497 |
| BtgI | CCRYGG | 1 cut(s) | 1055 |
| BtrI | CACGTC | 2 cut(s) | 1092, 1292 |
| BtsCI | GGATG | 8 cut(s) | 71, 1081, 1359, 1379, 1451, 1540, 1655, 2031 |
| BtsIMutI | CAGTG | 2 cut(s) | 941, 1007 |
| BtuMI | TCGCGA | 1 cut(s) | 1638 |
| BveI | ACCTGC | 1 cut(s) | 413 |
| Cac8I | GCNNGC | 1 cut(s) | 314 |
| CaiI | CAGNNNCTG | 3 cut(s) | 367, 943, 1009 |
| CciI | TCATGA | 1 cut(s) | 30 |
| Cfr13I | GGNCC | 2 cut(s) | 190, 1236 |
| ClaI | ATCGAT | 2 cut(s) | 345, 1497 |
| Csp6I | GTAC | 3 cut(s) | 6, 133, 1626 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1469, 1504 |
| CviAII | CATG | 5 cut(s) | 31, 698, 1082, 1580, 1678 |
| CviQI | GTAC | 3 cut(s) | 6, 133, 1626 |
| DdeI | CTNAG | 8 cut(s) | 95, 186, 203, 350, 372, 737, 949, 1262 |
| EaeI | YGGCCR | 1 cut(s) | 1600 |
| EagI | CGGCCG | 1 cut(s) | 1600 |
| Eam1104I | CTCTTC | 2 cut(s) | 800, 866 |
| EarI | CTCTTC | 2 cut(s) | 800, 866 |
| Ecl136II | GAGCTC | 4 cut(s) | 790, 856, 922, 988 |
| EclXI | CGGCCG | 1 cut(s) | 1600 |
| Eco24I | GRGCYC | 4 cut(s) | 792, 858, 924, 990 |
| Eco31I | GGTCTC | 1 cut(s) | 600 |
| Eco47I | GGWCC | 1 cut(s) | 1236 |
| Eco52I | CGGCCG | 1 cut(s) | 1600 |
| Eco53kI | GAGCTC | 4 cut(s) | 790, 856, 922, 988 |
| Eco57I | CTGAAG | 5 cut(s) | 30, 234, 824, 890, 1185 |
| Eco81I | CCTNAGG | 1 cut(s) | 186 |
| Eco88I | CYCGRG | 2 cut(s) | 404, 599 |
| EcoICRI | GAGCTC | 4 cut(s) | 790, 856, 922, 988 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 371 |
| EcoO109I | RGGNCCY | 1 cut(s) | 190 |
| EcoRI | GAATTC | 1 cut(s) | 673 |
| EcoRII | CCWGG | 5 cut(s) | 137, 166, 366, 529, 1468 |
| EcoT22I | ATGCAT | 2 cut(s) | 90, 1442 |
| EcoT38I | GRGCYC | 4 cut(s) | 792, 858, 924, 990 |
| Esp3I | CGTCTC | 2 cut(s) | 488, 1298 |
| FaeI | CATG | 5 cut(s) | 34, 701, 1085, 1583, 1681 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 144, 176, 646, 678 |
| FaqI | GGGAC | 1 cut(s) | 131 |
| FatI | CATG | 5 cut(s) | 30, 697, 1081, 1579, 1677 |
| FauNDI | CATATG | 1 cut(s) | 273 |
| Fnu4HI | GCNGC | 7 cut(s) | 69, 658, 703, 935, 1001, 1052, 1087 |
| FokI | GGATG | 7 cut(s) | 58, 1088, 1366, 1386, 1438, 1547, 1642 |
| FriOI | GRGCYC | 4 cut(s) | 792, 858, 924, 990 |
| Fsp4HI | GCNGC | 7 cut(s) | 69, 658, 703, 935, 1001, 1052, 1087 |
| FspBI | CTAG | 3 cut(s) | 104, 1097, 1308 |
| GluI | GCNGC | 7 cut(s) | 69, 658, 703, 935, 1001, 1052, 1087 |
| GsaI | CCCAGC | 2 cut(s) | 364, 999 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| HaeIII | GGCC | 3 cut(s) | 191, 1177, 1602 |
| HapII | CCGG | 1 cut(s) | 1331 |
| Hin1II | CATG | 5 cut(s) | 34, 701, 1085, 1583, 1681 |
| HincII | GTYRAC | 1 cut(s) | 1156 |
| HindII | GTYRAC | 1 cut(s) | 1156 |
| HindIII | AAGCTT | 3 cut(s) | 473, 605, 1391 |
| HpaII | CCGG | 1 cut(s) | 1331 |
| HphI | GGTGA | 1 cut(s) | 1762 |
| Hpy166II | GTNNAC | 3 cut(s) | 135, 1156, 1232 |
| Hpy188III | TCNNGA | 9 cut(s) | 31, 380, 404, 406, 599, 601, 713, 1520, 1637 |
| Hpy8I | GTNNAC | 3 cut(s) | 135, 1156, 1232 |
| HpyAV | CCTTC | 9 cut(s) | 85, 170, 459, 591, 738, 804, 870, 936, 1922 |
| HpyCH4III | ACNGT | 2 cut(s) | 1105, 1184 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 1091, 1242, 1291 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 274, 676, 787, 985, 1057 |
| HpyF3I | CTNAG | 8 cut(s) | 95, 186, 203, 350, 372, 737, 949, 1262 |
| HpySE526I | ACGT | 4 cut(s) | 60, 1091, 1242, 1291 |
| Hsp92II | CATG | 5 cut(s) | 34, 701, 1085, 1583, 1681 |
| LmnI | GCTCC | 6 cut(s) | 330, 684, 795, 861, 927, 993 |
| Lsp1109I | GCAGC | 7 cut(s) | 55, 669, 689, 921, 987, 1038, 1073 |
| MaeI | CTAG | 3 cut(s) | 104, 1097, 1308 |
| MaeII | ACGT | 4 cut(s) | 60, 1091, 1242, 1291 |
| MaeIII | GTNAC | 4 cut(s) | 353, 1092, 1427, 1517 |
| MfeI | CAATTG | 5 cut(s) | 757, 823, 889, 955, 1021 |
| MflI | RGATCY | 4 cut(s) | 40, 382, 839, 905 |
| MhlI | GDGCHC | 7 cut(s) | 159, 792, 858, 924, 990, 1234, 1587 |
| MlyI | GAGTC | 9 cut(s) | 403, 725, 775, 841, 907, 973, 1039, 1658, 1773 |
| MmeI | TCCRAC | 5 cut(s) | 1053, 1292, 1479, 1890, 1989 |
| Mph1103I | ATGCAT | 2 cut(s) | 90, 1442 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1611 |
| MseI | TTAA | 7 cut(s) | 195, 335, 548, 609, 642, 690, 1485 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspA1I | CMGCKG | 1 cut(s) | 1742 |
| MspCI | CTTAAG | 2 cut(s) | 641, 689 |
| MspI | CCGG | 1 cut(s) | 1331 |
| MspR9I | CCNGG | 6 cut(s) | 139, 168, 368, 531, 1332, 1470 |
| MunI | CAATTG | 5 cut(s) | 757, 823, 889, 955, 1021 |
| Mva1269I | GAATGC | 1 cut(s) | 70 |
| MvaI | CCWGG | 5 cut(s) | 139, 168, 368, 531, 1470 |
| MvnI | CGCG | 1 cut(s) | 1638 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 274, 676, 787, 985, 1057 |
| NciI | CCSGG | 1 cut(s) | 1332 |
| NdeI | CATATG | 1 cut(s) | 273 |
| NlaIII | CATG | 5 cut(s) | 34, 701, 1085, 1583, 1681 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| NmuCI | GTSAC | 3 cut(s) | 353, 1092, 1517 |
| NruI | TCGCGA | 1 cut(s) | 1638 |
| NsiI | ATGCAT | 2 cut(s) | 90, 1442 |
| NspV | TTCGAA | 1 cut(s) | 78 |
| PaeR7I | CTCGAG | 2 cut(s) | 404, 599 |
| PagI | TCATGA | 1 cut(s) | 30 |
| PctI | GAATGC | 1 cut(s) | 70 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1611 |
| PfeI | GAWTC | 3 cut(s) | 400, 556, 646 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 367 |
| PfoI | TCCNGGA | 1 cut(s) | 1330 |
| PkrI | GCNGC | 7 cut(s) | 70, 659, 704, 936, 1002, 1053, 1088 |
| PleI | GAGTC | 9 cut(s) | 402, 724, 774, 840, 906, 972, 1038, 1658, 1772 |
| PpsI | GAGTC | 9 cut(s) | 402, 724, 774, 840, 906, 972, 1038, 1658, 1772 |
| Ppu21I | YACGTR | 1 cut(s) | 61 |
| PsiI | TTATAA | 1 cut(s) | 1205 |
| Psp124BI | GAGCTC | 4 cut(s) | 792, 858, 924, 990 |
| Psp6I | CCWGG | 5 cut(s) | 137, 166, 366, 529, 1468 |
| PspFI | CCCAGC | 2 cut(s) | 360, 995 |
| PspGI | CCWGG | 5 cut(s) | 137, 166, 366, 529, 1468 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| PspPI | GGNCC | 2 cut(s) | 190, 1236 |
| PstI | CTGCAG | 3 cut(s) | 495, 939, 1005 |
| PstNI | CAGNNNCTG | 3 cut(s) | 367, 943, 1009 |
| PsuI | RGATCY | 4 cut(s) | 40, 382, 839, 905 |
| RruI | TCGCGA | 1 cut(s) | 1638 |
| RsaI | GTAC | 3 cut(s) | 7, 134, 1627 |
| RsaNI | GTAC | 3 cut(s) | 6, 133, 1626 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SacI | GAGCTC | 4 cut(s) | 792, 858, 924, 990 |
| SaqAI | TTAA | 7 cut(s) | 195, 335, 548, 609, 642, 690, 1485 |
| SatI | GCNGC | 7 cut(s) | 69, 658, 703, 935, 1001, 1052, 1087 |
| Sau96I | GGNCC | 2 cut(s) | 190, 1236 |
| SchI | GAGTC | 9 cut(s) | 403, 725, 775, 841, 907, 973, 1039, 1658, 1773 |
| ScrFI | CCNGG | 6 cut(s) | 139, 168, 368, 531, 1332, 1470 |
| SduI | GDGCHC | 7 cut(s) | 159, 792, 858, 924, 990, 1234, 1587 |
| SfcI | CTRYAG | 3 cut(s) | 491, 935, 1001 |
| Sfr274I | CTCGAG | 2 cut(s) | 404, 599 |
| SfuI | TTCGAA | 1 cut(s) | 78 |
| SinI | GGWCC | 1 cut(s) | 1236 |
| SlaI | CTCGAG | 2 cut(s) | 404, 599 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| SmlI | CTYRAG | 9 cut(s) | 290, 404, 599, 641, 689, 713, 817, 1015, 1108 |
| SmoI | CTYRAG | 9 cut(s) | 290, 404, 599, 641, 689, 713, 817, 1015, 1108 |
| SsiI | CCGC | 1 cut(s) | 1740 |
| SspMI | CTAG | 3 cut(s) | 104, 1097, 1308 |
| SstI | GAGCTC | 4 cut(s) | 792, 858, 924, 990 |
| StyD4I | CCNGG | 6 cut(s) | 137, 166, 366, 529, 1330, 1468 |
| TaaI | ACNGT | 2 cut(s) | 1105, 1184 |
| TaiI | ACGT | 4 cut(s) | 63, 1094, 1245, 1294 |
| TaqII | GACCGA | 1 cut(s) | 1937 |
| TatI | WGTACW | 1 cut(s) | 1625 |
| TfiI | GAWTC | 3 cut(s) | 400, 556, 646 |
| Tru1I | TTAA | 7 cut(s) | 195, 335, 548, 609, 642, 690, 1485 |
| Tru9I | TTAA | 7 cut(s) | 195, 335, 548, 609, 642, 690, 1485 |
| TscAI | CASTG | 2 cut(s) | 948, 1014 |
| TseFI | GTSAC | 3 cut(s) | 353, 1092, 1517 |
| TseI | GCWGC | 7 cut(s) | 68, 657, 702, 934, 1000, 1051, 1086 |
| Tsp45I | GTSAC | 3 cut(s) | 353, 1092, 1517 |
| TspDTI | ATGAA | 8 cut(s) | 47, 260, 441, 573, 1353, 1666, 1830, 1941 |
| TspGWI | ACGGA | 2 cut(s) | 53, 1249 |
| TspRI | CASTG | 2 cut(s) | 948, 1014 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 367 |
| Vha464I | CTTAAG | 2 cut(s) | 641, 689 |
| VneI | GTGCAC | 1 cut(s) | 1230 |
| VpaK11BI | GGWCC | 1 cut(s) | 1236 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 371 |
| XapI | RAATTY | 6 cut(s) | 513, 673, 1341, 1384, 1474, 1607 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1053 |
| XhoI | CTCGAG | 2 cut(s) | 404, 599 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1611 |
| XspI | CTAG | 3 cut(s) | 104, 1097, 1308 |
| Zsp2I | ATGCAT | 2 cut(s) | 90, 1442 |