MD04G1036400.v1.1

Toll - interleukin 1 - resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
4073404 .. 4077878
4475 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1036400.v1.1.491

Sequence Viewer

Length: 2616 bp
ATGGATATCGCTTCTTCTTCTTCATCCGCTGCTGCTCCTGCTGATGCTGATGATGCAAAAAAGTACGATGTGTTTATTAGTTTCAGAGGTGAGGACACCCGCCGTACTTTCACCAGCCACCTCCACGCTGCCTTACTTGAGAAAAAAATCACAACTTATATTGATGACAAGCTTAAGAGAGGAGATGAAATCGCACCCGCCCTTCTCGAAGCAATCGAGGAATCAGAGCTTTCAGTGATCATTTTCTCGAAAGGCTACGCTTCTTCCAAGTGGTGTTTGGATGAGCTTGTGCATATCCTAGAATGCAAGGAAAAACATGGCCAGTTGGTTATACCTATTTTTTACGACACCCTTCCATCGGATGTACGAAAACAACGGGGGAGTTATGAGGTTGCATTTGCTCAACTTGAACAACGTTTCCAGAACAGTATCGACAAGGTGCACAAGTGGAGGGATGCTTTGACGAATGCAGCAAATATATCTGGCTTTGATTCAAAAAATTATGGGACGGATGCTGATTTAGTTAAGAAAGTTGTTGAAGATATTTGGACCAAATTGTGTCGCGCATCATCCTGCGATTTAAAGGGCTTTGTTGGACTTGAAAGCCGCATCGAGCAGGTCGAATCGCTGTTAGGCTTTCATTCATCGGACGCTTGCATCACAGTAGGTATTTGGGGAATGGGTGGTATTGGCAAGACCACCCTTGCCGAAACTTTATTTCACAGACTCTCTTCTAAATTCGAAGCCTCCTGTTTTCTTAGAAATGTTAGGGAGAGAGAACAAAAGGATGGGCTAGAAAAGTTGCAAAATACACTTCTCAGTGAATTATTAAAGGAAGAAAGTTTATCCATAGGAACAACTTATGTTCGAGAAAGGCTTAGCCGTACAAAGGTCCTCATTGTTCTTGATGATGTGAGTGATTCAATGCAATTGGAACGTTTAGCTGGCGATCGTCTTCAGTATGGCACTGGAAGTAGAATCATTATCACAACTAGAGATAGGGGCACACTTGGGAAAACTGTTGAAGAGGATAATATCTACGAGGTTGAGGTATTAAAATCGGATGACGCTCTTCGGCTATTCTATTCGCGTGCTTTCAAGGATAACAGTACTCGTAGAACAGATTATAAGGAGTTGGCAAAAAAGGCGGTGGCTTATGCCAAAGGCGTTCCCTTAGCTCTTACAGTTCTGGGGTCCTTGTTCTTCAATTGCAAGAGCAAAGAAGAATGGGAAGATGAATTCAACAAATTGAAACGATTTCCCAGTGAAGATATTCAGAAAGTGTTGAGAATAAGTTATGATAGATTGAGAGAAAATGAGAGGGAGATATTTCTGGATATAGCATGTTTTCATAAAGGGAGCTCTGTGGTTGAGGTAAAACGAATGTTAGATGTTCGTGGATTCTTTGCGACATCGGGAATTAGAATTCTCATTGGGATGTCTCTCATATCAATTGATTCAGAAGGGGGAATGGAAACCATAGAGATGCACGATTTGCTACAAGAAATGGGAAGGAAATTTGTTCAAGAACAAGGTATTAAAGATCCTGGTAAACGGAGTAGGTTGTTCAATGATGAAGATGTCTTTCGTGTATTGAGGAGTAACACGGAAACTCCAAATGTTGAAGCCATGCAGGTTTATTGGTATGATCTTCAAGAGCGACCATTGAAACGTGCAGACTTCAAAAAGATGTCTAACCTAATAATGCTAATTGTGGATGGTGGCTACACATTCACCAATTCTCTAGACCTTCCCGATTCTCTTCGTTATCTTAAATGGTGGGGATATCCACTGGAATCTTTGCCGTCAAATTTTTGTCCGGAAAATCTAGTTGAGCTTCATATATCCAATAGCAAAGTTAAGAAGCTTTGGAAAGAAGAGCAGATACTTGTCAACTTGCAAGTTATCGATCTGTCGGGCTCTAAGTATCTAACTGAAGTTCCAAATCTCTCTGGGAGTCTAAAAATTGTGGAGATAAATCTCTGGGGCTGTATAAGTTTGGTTGAAATTCCTTTGTATTTTCAACATCTTGACAAGCTTACTCATCTTAATCTTAGAGGCTGCAGCAGTCTCAAGTATCTTCCAGAGATGCCAGGAAATATTCAATACTTGGATTTACAACACACAGGTATAAAGGAGTTGCCTGAATCAGTTTGGTCTAACGAAAATATTTTTCACTTGAGTTTAAGGAAATGCAAAGACCTTAAGAAACTTCCAAGCATCAGGTGTAAGTTGAAAAATCTCGATCTCGATGGGTGCTATAAATTTGAAAACTTTCCAGAGATTTTGGAGCCAATGGAACATTTGAAGTCCGTAAGTTTAATTGAAACAGCAGTTACAGAGCTACCCTCATCAATCTGTAACTTGAAATATCTTGAGAGTCTTGTTCTCACCAGGTGCTTTAGATTTTCCAAGTTCCCTGAAATCTTGGAGCCAATGGAACATTTGAAGTCCTTAAGTTTAAGACAAACAGCAGTTACAGAGCTACCTTCATCAATCTGTAAGTTGAAATATCTTGAGAGGCTTGATCTCAGCAATTGCTCTAGATTTTCCAAATTCCCTGAAATCTTGAAGCCAATGGAACATTTGAAGTCAGCTACCCTCATCCATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

872

Amino Acids

99.63

Weight (kDa)

6.22

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 21 - 189 1.7e-55 TIR domain
TIR_2 PF13676 24 - 120 2.7e-15 TIR domain
NB-ARC PF00931 205 - 369 2.2e-21 NB-ARC domain
NACHT PF05729 222 - 362 6.8e-07 NACHT domain
WHD_ROQ1 PF23282 438 - 511 2e-16 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 745 - 792 7.5e-06 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 813 - 863 3.3e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000020)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g26600 FvH4_2g27070 FvH4_2g27070 FvH4_2g27070 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27370 FvH4_2g27701 FvH4_2g27720 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g05740 FvH4_3g15720 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_5g35770 FvH4_6g34390 FvH4_6g34410 FvH4_6g34410
malus_domestica MD02G1278900.v1.1 MD03G1127300.v1.1 MD04G1027100.v1.1 MD04G1035000.v1.1 MD04G1035200.v1.1 MD04G1035600.v1.1 MD04G1036000.v1.1 MD04G1036100.v1.1 MD04G1036400.v1.1 MD05G1125400.v1.1 MD05G1125600.v1.1 MD05G1125700.v1.1 MD05G1126000.v1.1 MD05G1131900.v1.1 MD05G1132400.v1.1 MD05G1132600.v1.1 MD05G1132800.v1.1 MD05G1135700.v1.1 MD05G1135800.v1.1 MD05G1136700.v1.1 MD05G1137400.v1.1 MD05G1137900.v1.1 MD05G1138300.v1.1 MD05G1138400.v1.1 MD05G1138500.v1.1 MD05G1141700.v1.1 MD05G1142600.v1.1 MD05G1143300.v1.1 MD05G1145200.v1.1 MD05G1146500.v1.1 MD05G1146600.v1.1 MD05G1147100.v1.1 MD05G1147500.v1.1 MD05G1147600.v1.1 MD05G1148300.v1.1 MD05G1148600.v1.1 MD05G1149400.v1.1 MD05G1149500.v1.1 MD05G1150100.v1.1 MD05G1150200.v1.1 MD05G1150900.v1.1 MD05G1151200.v1.1 MD08G1168700.v1.1 MD10G1128400.v1.1 MD10G1128500.v1.1 MD10G1128600.v1.1 MD10G1134800.v1.1 MD10G1135300.v1.1 MD10G1135800.v1.1 MD10G1135900.v1.1 MD10G1136100.v1.1 MD10G1136200.v1.1 MD10G1136400.v1.1 MD10G1136500.v1.1 MD10G1136600.v1.1 MD10G1137100.v1.1 MD10G1137400.v1.1 MD10G1137500.v1.1 MD10G1137700.v1.1 MD10G1140900.v1.1 MD10G1141100.v1.1 MD10G1141400.v1.1 MD12G1073200.v1.1 MD12G1074900.v1.1 MD16G1140700.v1.1
prunus_persica Prupe.1G160400_v2.0.a1 Prupe.1G160500_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G060400_v2.0.a1 Prupe.2G083200_v2.0.a1 Prupe.6G152300_v2.0.a1 Prupe.8G037000_v2.0.a1 Prupe.8G117300_v2.0.a1 Prupe.8G117700_v2.0.a1 Prupe.8G118900_v2.0.a1 Prupe.8G173600_v2.0.a1 Prupe.8G173700_v2.0.a1 Prupe.8G176400_v2.0.a1 Prupe.8G179400_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G179500_v2.0.a1 Prupe.8G237200_v2.0.a1 Prupe.I001800_v2.0.a1 Prupe.I002000_v2.0.a1 Prupe.I002100_v2.0.a1 Prupe.I002200_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1 Prupe.I002300_v2.0.a1
pyrus_communis pycom02g10490 pycom03g08410 pycom04g02350 pycom04g02370 pycom04g02890 pycom04g02920 pycom04g02930 pycom05g09430 pycom05g11970 pycom05g11980 pycom05g12000 pycom05g12010 pycom05g12040 pycom05g12080 pycom05g12100 pycom05g12110 pycom05g12160 pycom05g12910 pycom05g12920 pycom05g12940 pycom05g13220 pycom05g13230 pycom05g13260 pycom05g13300 pycom05g13320 pycom05g13330 pycom05g13350 pycom05g13680 pycom05g13710 pycom05g13720 pycom05g13730 pycom05g14120 pycom05g14130 pycom05g14160 pycom05g14210 pycom05g14250 pycom05g14280 pycom05g14290 pycom05g14340 pycom05g14390 pycom05g14430 pycom05g14460 pycom05g14530 pycom05g14560 pycom05g14570 pycom05g14580 pycom10g11010 pycom10g11020 pycom10g11030 pycom10g11250 pycom10g11640 pycom10g11670 pycom10g11680 pycom10g11720 pycom10g11730 pycom10g11950 pycom10g11960 pycom10g12000 pycom10g12050 pycom10g12070 pycom10g12310
rosa_chinensis RchiOBHm_Chr1g0314371 RchiOBHm_Chr1g0314461 RchiOBHm_Chr1g0314491 RchiOBHm_Chr1g0314661 RchiOBHm_Chr1g0314671 RchiOBHm_Chr1g0314701 RchiOBHm_Chr1g0314711 RchiOBHm_Chr1g0314741 RchiOBHm_Chr1g0327611 RchiOBHm_Chr1g0333931 RchiOBHm_Chr1g0334091 RchiOBHm_Chr1g0334101 RchiOBHm_Chr2g0144731 RchiOBHm_Chr2g0144751 RchiOBHm_Chr3g0451471 RchiOBHm_Chr3g0451481 RchiOBHm_Chr3g0451521 RchiOBHm_Chr3g0451541 RchiOBHm_Chr3g0451581 RchiOBHm_Chr3g0451641 RchiOBHm_Chr3g0451661 RchiOBHm_Chr3g0451671 RchiOBHm_Chr3g0484861 RchiOBHm_Chr5g0013861 RchiOBHm_Chr5g0013871 RchiOBHm_Chr5g0013881 RchiOBHm_Chr5g0013921 RchiOBHm_Chr5g0013931 RchiOBHm_Chr5g0026001 RchiOBHm_Chr5g0026101 RchiOBHm_Chr5g0026421 RchiOBHm_Chr5g0066271 RchiOBHm_Chr6g0287411 RchiOBHm_Chr6g0287421 RchiOBHm_Chr6g0287561 RchiOBHm_Chr6g0287581 RchiOBHm_Chr6g0287591 RchiOBHm_Chr6g0296221 RchiOBHm_Chr7g0237431
rosa_laevigata RLG00000001003 RLG00000011679 RLG00000011716 RLG00000012483 RLG00000012484 RLG00000013019 RLG00000015060 RLG00000020104 RLG00000020105 RLG00000020106 RLG00000020107 RLG00000020108 RLG00000020109 RLG00000023202 RLG00000024217 RLG00000025656 RLG00000025657 RLG00000026224 RLG00000029504 RLG00000029507 RLG00000029508 RLG00000029509 RLG00000029980 RLG00000030042 RLG00000032050 RLG00000032051 RLG00000032052 RLG00000032891 RLG00000032896 RLG00000032900 RLG00000032901 RLG00000032930 RLG00000032931 RLG00000035381 RLG00000035383 RLG00000035847
rosa_multiflora Rmu_co7983036.1_g000001 Rmu_co8026080.1_g000001 Rmu_co8242645.1_g000001 Rmu_co8396077.1_g000001 Rmu_co8406137.1_g000001 Rmu_co8420673.1_g000001 Rmu_co8458221.1_g000001 Rmu_sc0000026.1_g000007 Rmu_sc0000795.1_g000054 Rmu_sc0000997.1_g000011 Rmu_sc0001689.1_g000014 Rmu_sc0001802.1_g000009 Rmu_sc0002354.1_g000053 Rmu_sc0002354.1_g000055 Rmu_sc0002806.1_g000016 Rmu_sc0002833.1_g000022 Rmu_sc0002843.1_g000009 Rmu_sc0002923.1_g000021 Rmu_sc0003020.1_g000017 Rmu_sc0003598.1_g000012 Rmu_sc0003598.1_g000013 Rmu_sc0003598.1_g000014 Rmu_sc0003598.1_g000015 Rmu_sc0003690.1_g000001 Rmu_sc0004708.1_g000014 Rmu_sc0004924.1_g000009 Rmu_sc0004924.1_g000018 Rmu_sc0004924.1_g000022 Rmu_sc0004924.1_g000026 Rmu_sc0004924.1_g000032 Rmu_sc0004924.1_g000033 Rmu_sc0004924.1_g000037 Rmu_sc0004924.1_g000039 Rmu_sc0004974.1_g000006 Rmu_sc0005581.1_g000001 Rmu_sc0005581.1_g000010 Rmu_sc0005803.1_g000021 Rmu_sc0006653.1_g000009 Rmu_sc0007029.1_g000008 Rmu_sc0009360.1_g000007 Rmu_sc0009360.1_g000012 Rmu_sc0009360.1_g000013 Rmu_sc0009360.1_g000015 Rmu_sc0009360.1_g000021 Rmu_sc0009360.1_g000033 Rmu_sc0009360.1_g000048 Rmu_sc0009360.1_g000049 Rmu_sc0009360.1_g000051 Rmu_sc0011096.1_g000005 Rmu_sc0016584.1_g000002 Rmu_sc0020815.1_g000001 Rmu_sc0020815.1_g000002 Rmu_sc0025510.1_g000001 Rmu_sc0026263.1_g000003 Rmu_sc0029456.1_g000001 Rmu_sc0029457.1_g000001 Rmu_sc0029568.1_g000001 Rmu_sc0032214.1_g000001 Rmu_sc0041321.1_g000001 Rmu_sc0042928.1_g000001 Rmu_ssc0000042.1_g000010 Rmu_ssc0000042.1_g000019 Rmu_ssc0000042.1_g000020 Rmu_ssc0000126.1_g000058
rosa_roxburghii Rroxscaffold_164G00436360 Rroxscaffold_164G00436400 Rroxscaffold_164G00436430 Rroxscaffold_164G00436440 Rroxscaffold_164G00436470 Rroxscaffold_1G00052970 Rroxscaffold_1G00062790 Rroxscaffold_1G00062820 Rroxscaffold_2G00100990 Rroxscaffold_2G00101010 Rroxscaffold_3G00224210 Rroxscaffold_4G00297610 Rroxscaffold_4G00317070 Rroxscaffold_4G00317100 Rroxscaffold_4G00317110 Rroxscaffold_4G00317120 Rroxscaffold_4G00322520 Rroxscaffold_4G00322530 Rroxscaffold_4G00323280 Rroxscaffold_4G00331920 Rroxscaffold_6G00410350 Rroxscaffold_6G00428880 Rroxscaffold_6G00428910 Rroxscaffold_6G00428930 Rroxscaffold_7G00171360 Rroxscaffold_7G00171730 Rroxscaffold_7G00178330 Rroxscaffold_7G00178730 Rroxscaffold_7G00180960 Rroxscaffold_7G00181370
rosa_rugosa Rorug01G0001400 Rorug01G0001500 Rorug01G0001600 Rorug01G0001700 Rorug01G0068600 Rorug01G0068700 Rorug02G0389400 Rorug02G0389500 Rorug02G0634000 Rorug02G0634300 Rorug02G0634600 Rorug02G0634800 Rorug02G0634900 Rorug02G0634900 Rorug02G0635000 Rorug02G0635100 Rorug02G0635200 Rorug02G0635300 Rorug02G0635400 Rorug03G0213900 Rorug05G0012800 Rorug05G0012900 Rorug05G0013100 Rorug05G0013300 Rorug05G0090300 Rorug05G0090400 Rorug05G0092900 Rorug05G0093000 Rorug05G0093100 Rorug06G0189200 Rorug06G0189200 Rorug06G0189300 Rorug06G0189400 Rorug06G0259500 Rorug07G0303200 Rorug07G0303300.1
rosa_samantha Rh1AG010600 Rh1AG010900 Rh1AG011800 Rh1AG012100 Rh1AG012500 Rh1AG081000 Rh1AG085900 Rh1AG135300 Rh1AG135400 Rh1AG135500 Rh1AG135700 Rh1AG135800 Rh1AG136400 Rh1BG003400 Rh1BG003700 Rh1BG068500 Rh1BG103400 Rh1BG103500 Rh1BG103600 Rh1CG128600 Rh1CG128800 Rh1DG005800 Rh1DG090100 Rh1DG140800 Rh1DG140900 Rh1DG141100 Rh1DG141200 Rh1DG141500 Rh2AG441200 Rh2BG451500 Rh2BG451800 Rh2BG451900 Rh2CG428500 Rh2DG461500 Rh3AG037000 Rh3AG037100 Rh3AG037200 Rh3BG037600 Rh3BG037700 Rh3BG037800 Rh3BG038100 Rh3BG299500 Rh3BG299800 Rh3BG299900 Rh3CG036200 Rh3CG036400 Rh3CG036500 Rh3CG036800 Rh3CG297200 Rh3DG037100 Rh3DG037200 Rh3DG037400 Rh3DG293200 Rh5BG103800 Rh5BG104100 Rh5BG104200 Rh5BG180100 Rh5BG180200 Rh5BG183000 Rh5BG451600 Rh5CG115600 Rh5CG115700 Rh5CG115900 Rh5CG116100 Rh5CG198800 Rh5CG199300 Rh5CG202400 Rh5DG102100 Rh5DG102200 Rh5DG102300 Rh5DG102600 Rh5DG102800 Rh5DG181100 Rh5DG181300 Rh5DG181800 Rh5DG184900 Rh5DG185100 Rh6AG256000 Rh6AG299200 Rh6AG299300 Rh6AG300400 Rh6AG371800 Rh6BG383300 Rh6CG303400 Rh6CG314400 Rh6CG385000 Rh6DG297800 Rh6DG372300 Rh7BG046900 Rh7BG312300 Rh7BG312500 Rh7BG430400
rosa_wichuraiana Rw0G009620 Rw0G015730 Rw1G000490 Rw1G006410 Rw1G006700 Rw1G011270 Rw1G011280 Rw1G011310 Rw2G036080 Rw3G002740 Rw3G002750 Rw3G002760 Rw3G002770 Rw3G023580 Rw5G009360 Rw5G009370 Rw5G009380 Rw5G009390 Rw5G009400 Rw5G016550 Rw5G016890 Rw5G016910 Rw5G040760 Rw6G022190 Rw6G025910 Rw6G032400 Rw6G032690 Rw6G032790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1128
Acc36I ACCTGC 2 cut(s) 607, 1624
AccII CGCG 2 cut(s) 564, 1090
AccIII TCCGGA 1 cut(s) 1819
AciI CCGC 5 cut(s) 27, 100, 198, 607, 1148
AclI AACGTT 2 cut(s) 415, 937
AclWI GGATC 1 cut(s) 1538
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 8 cut(s) 737, 1238, 1425, 1517, 1810, 2007, 2264, 2555
AcuI CTGAAG 2 cut(s) 941, 1956
AdeI CACNNNGTG 1 cut(s) 2397
AfaI GTAC 5 cut(s) 65, 106, 366, 886, 1111
AfiI CCNNNNNNNGG 2 cut(s) 358, 889
AflII CTTAAG 3 cut(s) 173, 2204, 2455
AjnI CCWGG 3 cut(s) 1546, 2092, 2393
AloI GAACNNNNNNTCC 2 cut(s) 402, 434
Alw21I GWGCWC 2 cut(s) 444, 1364
Alw26I GTCTC 2 cut(s) 1446, 2075
Alw44I GTGCAC 1 cut(s) 440
AlwI GGATC 1 cut(s) 1538
Aor13HI TCCGGA 1 cut(s) 1819
AoxI GGCC 1 cut(s) 319
ApaLI GTGCAC 1 cut(s) 440
ApeKI GCWGC 6 cut(s) 29, 32, 128, 470, 2061, 2064
ApoI RAATTY 8 cut(s) 737, 1238, 1425, 1517, 1810, 2007, 2264, 2555
Asp700I GAANNNNTTC 2 cut(s) 1272, 2274
AspLEI GCGC 1 cut(s) 566
AspS9I GGNCC 3 cut(s) 549, 892, 1194
AsuHPI GGTGA 4 cut(s) 101, 103, 1726, 2383
AsuII TTCGAA 1 cut(s) 741
AvaII GGWCC 3 cut(s) 549, 892, 1194
BaeGI GKGCMC 2 cut(s) 444, 1007
BalI TGGCCA 1 cut(s) 321
BanII GRGCYC 2 cut(s) 1364, 1922
BarI GAAGNNNNNNTAC 2 cut(s) 1869, 1901
BbsI GAAGAC 1 cut(s) 947
Bbv12I GWGCWC 2 cut(s) 444, 1364
BbvI GCAGC 6 cut(s) 16, 19, 115, 482, 2048, 2076
BccI CCATC 4 cut(s) 364, 782, 1712, 2246
BceAI ACGGC 3 cut(s) 87, 867, 1789
BciT130I CCWGG 3 cut(s) 1548, 2094, 2395
BclI TGATCA 1 cut(s) 237
BcoDI GTCTC 2 cut(s) 1446, 2075
BfaI CTAG 6 cut(s) 299, 794, 993, 1745, 1829, 2544
BfmI CTRYAG 1 cut(s) 2062
BfrI CTTAAG 3 cut(s) 173, 2204, 2455
BfuAI ACCTGC 2 cut(s) 607, 1624
BisI GCNGC 7 cut(s) 30, 33, 129, 471, 607, 2062, 2065
BlpI GCTNAGC 1 cut(s) 878
BlsI GCNGC 7 cut(s) 31, 34, 130, 472, 608, 2063, 2066
BmcAI AGTACT 1 cut(s) 1111
Bme1390I CCNGG 3 cut(s) 1548, 2094, 2395
Bme18I GGWCC 3 cut(s) 549, 892, 1194
BmgT120I GGNCC 3 cut(s) 549, 892, 1194
BmiI GGNNCC 3 cut(s) 1195, 2292, 2433
BmrFI CCNGG 3 cut(s) 1548, 2094, 2395
BmrI ACTGGG 1 cut(s) 1257
BmuI ACTGGG 1 cut(s) 1257
BpiI GAAGAC 1 cut(s) 947
BplI GAGNNNNNCTC 2 cut(s) 2333, 2365
Bpu10I CCTNAGC 1 cut(s) 1174
Bpu1102I GCTNAGC 1 cut(s) 878
Bpu14I TTCGAA 1 cut(s) 741
BpuEI CTTGAG 5 cut(s) 158, 2057, 2200, 2396, 2537
Bsa29I ATCGAT 1 cut(s) 1908
BsaWI WCCGGW 1 cut(s) 1819
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 2 cut(s) 358, 889
Bse1I ACTGG 4 cut(s) 322, 973, 1263, 1797
BseAI TCCGGA 1 cut(s) 1819
BseBI CCWGG 3 cut(s) 1548, 2094, 2395
BseCI ATCGAT 1 cut(s) 1908
BseLI CCNNNNNNNGG 2 cut(s) 358, 889
BseMII CTCAG 2 cut(s) 832, 2545
BseNI ACTGG 4 cut(s) 322, 973, 1263, 1797
BseRI GAGGAG 2 cut(s) 195, 1612
BseSI GKGCMC 2 cut(s) 444, 1007
BseXI GCAGC 6 cut(s) 16, 19, 115, 482, 2048, 2076
BsgI GTGCAG 1 cut(s) 1695
Bsh1236I CGCG 2 cut(s) 564, 1090
Bsh1285I CGRYCG 1 cut(s) 952
BshFI GGCC 1 cut(s) 321
BshVI ATCGAT 1 cut(s) 1908
BsiEI CGRYCG 1 cut(s) 952
BsiHKAI GWGCWC 2 cut(s) 444, 1364
BsiSI CCGG 1 cut(s) 1820
BslFI GGGAC 1 cut(s) 520
BslI CCNNNNNNNGG 2 cut(s) 358, 889
BsmAI GTCTC 2 cut(s) 1446, 2075
BsmFI GGGAC 1 cut(s) 520
BsmI GAATGC 2 cut(s) 308, 472
BsnI GGCC 1 cut(s) 321
Bsp119I TTCGAA 1 cut(s) 741
Bsp1286I GDGCHC 4 cut(s) 444, 1007, 1364, 1922
Bsp13I TCCGGA 1 cut(s) 1819
Bsp143I GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
Bsp1720I GCTNAGC 1 cut(s) 878
BspACI CCGC 5 cut(s) 27, 100, 198, 607, 1148
BspANI GGCC 1 cut(s) 321
BspCNI CTCAG 2 cut(s) 831, 2544
BspDI ATCGAT 1 cut(s) 1908
BspEI TCCGGA 1 cut(s) 1819
BspFNI CGCG 2 cut(s) 564, 1090
BspLI GGNNCC 3 cut(s) 1195, 2292, 2433
BspMAI CTGCAG 1 cut(s) 2066
BspMI ACCTGC 2 cut(s) 607, 1624
BspPI GGATC 1 cut(s) 1538
BspQI GCTCTTC 2 cut(s) 1077, 1872
BspT104I TTCGAA 1 cut(s) 741
BspTI CTTAAG 3 cut(s) 173, 2204, 2455
BsrI ACTGG 4 cut(s) 322, 973, 1263, 1797
BssMI GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
Bst2UI CCWGG 3 cut(s) 1548, 2094, 2395
Bst4CI ACNGT 5 cut(s) 428, 664, 1021, 1109, 1186
Bst6I CTCTTC 5 cut(s) 736, 1020, 1077, 1767, 1872
BstAFI CTTAAG 3 cut(s) 173, 2204, 2455
BstAPI GCANNNNNTGC 1 cut(s) 1495
BstBI TTCGAA 1 cut(s) 741
BstC8I GCNNGC 3 cut(s) 655, 946, 1092
BstDEI CTNAG 7 cut(s) 758, 818, 878, 1174, 1923, 2054, 2531
BstFNI CGCG 2 cut(s) 564, 1090
BstHHI GCGC 1 cut(s) 566
BstKTI GATC 7 cut(s) 240, 952, 1546, 1651, 1912, 2248, 2530
BstMAI GTCTC 2 cut(s) 1446, 2075
BstMBI GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
BstMCI CGRYCG 1 cut(s) 952
BstMWI GCNNNNNNNGC 4 cut(s) 38, 53, 1145, 1495
BstNI CCWGG 3 cut(s) 1548, 2094, 2395
BstNSI RCATGY 1 cut(s) 1347
BstSCI CCNGG 3 cut(s) 1546, 2092, 2393
BstSFI CTRYAG 1 cut(s) 2062
BstSLI GKGCMC 2 cut(s) 444, 1007
BstUI CGCG 2 cut(s) 564, 1090
BstV1I GCAGC 6 cut(s) 16, 19, 115, 482, 2048, 2076
BstV2I GAAGAC 1 cut(s) 947
BstX2I RGATCY 1 cut(s) 1543
BstYI RGATCY 1 cut(s) 1543
Bsu15I ATCGAT 1 cut(s) 1908
BsuRI GGCC 1 cut(s) 321
BsuTUI ATCGAT 1 cut(s) 1908
BtsIMutI CAGTG 5 cut(s) 240, 826, 966, 1270, 1790
BveI ACCTGC 2 cut(s) 607, 1624
Cac8I GCNNGC 3 cut(s) 655, 946, 1092
CfoI GCGC 1 cut(s) 566
Cfr13I GGNCC 3 cut(s) 549, 892, 1194
ClaI ATCGAT 1 cut(s) 1908
CseI GACGC 2 cut(s) 659, 1076
CsiI ACCWGGT 1 cut(s) 2393
Csp6I GTAC 5 cut(s) 64, 105, 365, 885, 1110
CviAII CATG 3 cut(s) 317, 1344, 1630
CviQI GTAC 5 cut(s) 64, 105, 365, 885, 1110
DdeI CTNAG 7 cut(s) 758, 818, 878, 1174, 1923, 2054, 2531
DpnI GATC 7 cut(s) 239, 951, 1545, 1650, 1911, 2247, 2529
DpnII GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
DraI TTTAAA 1 cut(s) 582
DraIII CACNNNGTG 1 cut(s) 2397
EaeI YGGCCR 1 cut(s) 319
Eam1104I CTCTTC 5 cut(s) 736, 1020, 1077, 1767, 1872
EarI CTCTTC 5 cut(s) 736, 1020, 1077, 1767, 1872
Ecl136II GAGCTC 1 cut(s) 1362
Eco24I GRGCYC 2 cut(s) 1364, 1922
Eco32I GATATC 2 cut(s) 7, 1787
Eco47I GGWCC 3 cut(s) 549, 892, 1194
Eco53kI GAGCTC 1 cut(s) 1362
Eco57I CTGAAG 2 cut(s) 941, 1956
EcoICRI GAGCTC 1 cut(s) 1362
EcoO109I RGGNCCY 2 cut(s) 892, 1194
EcoRI GAATTC 2 cut(s) 1238, 1425
EcoRII CCWGG 3 cut(s) 1546, 2092, 2393
EcoRV GATATC 2 cut(s) 7, 1787
EcoT38I GRGCYC 2 cut(s) 1364, 1922
FaeI CATG 3 cut(s) 320, 1347, 1633
FaqI GGGAC 1 cut(s) 520
FatI CATG 3 cut(s) 316, 1343, 1629
FauI CCCGC 2 cut(s) 107, 205
FbaI TGATCA 1 cut(s) 237
Fnu4HI GCNGC 7 cut(s) 30, 33, 129, 471, 607, 2062, 2065
FriOI GRGCYC 2 cut(s) 1364, 1922
Fsp4HI GCNGC 7 cut(s) 30, 33, 129, 471, 607, 2062, 2065
FspBI CTAG 6 cut(s) 299, 794, 993, 1745, 1829, 2544
GlaI GCGC 1 cut(s) 565
GluI GCNGC 7 cut(s) 30, 33, 129, 471, 607, 2062, 2065
HaeIII GGCC 1 cut(s) 321
HapII CCGG 1 cut(s) 1820
HgaI GACGC 2 cut(s) 659, 1076
HhaI GCGC 1 cut(s) 566
Hin1II CATG 3 cut(s) 320, 1347, 1633
Hin6I GCGC 1 cut(s) 564
HinP1I GCGC 1 cut(s) 564
HincII GTYRAC 1 cut(s) 1894
HindII GTYRAC 1 cut(s) 1894
HindIII AAGCTT 3 cut(s) 170, 1865, 2036
HpaII CCGG 1 cut(s) 1820
HphI GGTGA 4 cut(s) 101, 103, 1726, 2383
Hpy166II GTNNAC 3 cut(s) 442, 1553, 1894
Hpy188I TCNGA 7 cut(s) 86, 226, 361, 649, 1063, 1278, 1462
Hpy8I GTNNAC 3 cut(s) 442, 1553, 1894
HpyAV CCTTC 6 cut(s) 212, 362, 1457, 1506, 1760, 2499
HpyCH4III ACNGT 5 cut(s) 428, 664, 1021, 1109, 1186
HpyCH4IV ACGT 3 cut(s) 415, 937, 1672
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 53, 1145, 1495
HpyF3I CTNAG 7 cut(s) 758, 818, 878, 1174, 1923, 2054, 2531
HpySE526I ACGT 3 cut(s) 415, 937, 1672
Hsp92II CATG 3 cut(s) 320, 1347, 1633
HspAI GCGC 1 cut(s) 564
Kpn2I TCCGGA 1 cut(s) 1819
Ksp22I TGATCA 1 cut(s) 237
Kzo9I GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
LguI GCTCTTC 2 cut(s) 1077, 1872
LmnI GCTCC 4 cut(s) 40, 1359, 2290, 2431
Lsp1109I GCAGC 6 cut(s) 16, 19, 115, 482, 2048, 2076
MabI ACCWGGT 1 cut(s) 2393
MaeI CTAG 6 cut(s) 299, 794, 993, 1745, 1829, 2544
MaeII ACGT 3 cut(s) 415, 937, 1672
MaeIII GTNAC 4 cut(s) 1601, 2335, 2360, 2476
MalI GATC 7 cut(s) 239, 951, 1545, 1650, 1911, 2247, 2529
MboI GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
MfeI CAATTG 4 cut(s) 929, 1207, 1452, 2536
MflI RGATCY 1 cut(s) 1543
MhlI GDGCHC 4 cut(s) 444, 1007, 1364, 1922
MlsI TGGCCA 1 cut(s) 321
MluNI TGGCCA 1 cut(s) 321
MlyI GAGTC 3 cut(s) 720, 1966, 2389
MmeI TCCRAC 1 cut(s) 574
Mox20I TGGCCA 1 cut(s) 321
MroI TCCGGA 1 cut(s) 1819
MroXI GAANNNNTTC 2 cut(s) 1272, 2274
MscI TGGCCA 1 cut(s) 321
MslI CAYNNNNRTG 2 cut(s) 1436, 1484
Msp20I TGGCCA 1 cut(s) 321
MspA1I CMGCKG 1 cut(s) 29
MspCI CTTAAG 3 cut(s) 173, 2204, 2455
MspI CCGG 1 cut(s) 1820
MspR9I CCNGG 3 cut(s) 1548, 2094, 2395
MunI CAATTG 4 cut(s) 929, 1207, 1452, 2536
Mva1269I GAATGC 2 cut(s) 308, 472
MvaI CCWGG 3 cut(s) 1548, 2094, 2395
MvnI CGCG 2 cut(s) 564, 1090
MwoI GCNNNNNNNGC 4 cut(s) 38, 53, 1145, 1495
NdeII GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
NlaIII CATG 3 cut(s) 320, 1347, 1633
NlaIV GGNNCC 3 cut(s) 1195, 2292, 2433
NspI RCATGY 1 cut(s) 1347
NspV TTCGAA 1 cut(s) 741
PciSI GCTCTTC 2 cut(s) 1077, 1872
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 618
PctI GAATGC 2 cut(s) 308, 472
PdmI GAANNNNTTC 2 cut(s) 1272, 2274
PkrI GCNGC 7 cut(s) 31, 34, 130, 472, 608, 2063, 2066
Ple19I CGATCG 1 cut(s) 952
PleI GAGTC 3 cut(s) 720, 1965, 2388
PpsI GAGTC 3 cut(s) 720, 1965, 2388
PpuMI RGGWCCY 2 cut(s) 892, 1194
PsiI TTATAA 1 cut(s) 1128
Psp124BI GAGCTC 1 cut(s) 1364
Psp1406I AACGTT 2 cut(s) 415, 937
Psp5II RGGWCCY 2 cut(s) 892, 1194
Psp6I CCWGG 3 cut(s) 1546, 2092, 2393
PspGI CCWGG 3 cut(s) 1546, 2092, 2393
PspN4I GGNNCC 3 cut(s) 1195, 2292, 2433
PspPI GGNCC 3 cut(s) 549, 892, 1194
PspPPI RGGWCCY 2 cut(s) 892, 1194
PstI CTGCAG 1 cut(s) 2066
PsuI RGATCY 1 cut(s) 1543
PvuI CGATCG 1 cut(s) 952
RsaI GTAC 5 cut(s) 65, 106, 366, 886, 1111
RsaNI GTAC 5 cut(s) 64, 105, 365, 885, 1110
RseI CAYNNNNRTG 2 cut(s) 1436, 1484
SacI GAGCTC 1 cut(s) 1364
SapI GCTCTTC 2 cut(s) 1077, 1872
SatI GCNGC 7 cut(s) 30, 33, 129, 471, 607, 2062, 2065
Sau3AI GATC 7 cut(s) 237, 949, 1543, 1648, 1909, 2245, 2527
Sau96I GGNCC 3 cut(s) 549, 892, 1194
ScaI AGTACT 1 cut(s) 1111
SchI GAGTC 3 cut(s) 720, 1966, 2389
ScrFI CCNGG 3 cut(s) 1548, 2094, 2395
SduI GDGCHC 4 cut(s) 444, 1007, 1364, 1922
SexAI ACCWGGT 1 cut(s) 2393
SfcI CTRYAG 1 cut(s) 2062
SfuI TTCGAA 1 cut(s) 741
SinI GGWCC 3 cut(s) 549, 892, 1194
SmiMI CAYNNNNRTG 2 cut(s) 1436, 1484
SmlI CTYRAG 8 cut(s) 137, 173, 2072, 2179, 2204, 2375, 2455, 2516
SmoI CTYRAG 8 cut(s) 137, 173, 2072, 2179, 2204, 2375, 2455, 2516
SsiI CCGC 5 cut(s) 27, 100, 198, 607, 1148
SspI AATATT 2 cut(s) 2101, 2170
SspMI CTAG 6 cut(s) 299, 794, 993, 1745, 1829, 2544
SstI GAGCTC 1 cut(s) 1364
StyD4I CCNGG 3 cut(s) 1546, 2092, 2393
TaaI ACNGT 5 cut(s) 428, 664, 1021, 1109, 1186
TaiI ACGT 3 cut(s) 418, 940, 1675
TatI WGTACW 1 cut(s) 1109
TauI GCSGC 1 cut(s) 609
TscAI CASTG 5 cut(s) 240, 826, 973, 1270, 1797
TseI GCWGC 6 cut(s) 29, 32, 128, 470, 2061, 2064
TspDTI ATGAA 9 cut(s) 12, 201, 629, 633, 1251, 1340, 1590, 1829, 2481
TspGWI ACGGA 4 cut(s) 524, 1570, 1622, 2302
TspRI CASTG 5 cut(s) 240, 826, 973, 1270, 1797
Vha464I CTTAAG 3 cut(s) 173, 2204, 2455
VneI GTGCAC 1 cut(s) 440
VpaK11BI GGWCC 3 cut(s) 549, 892, 1194
XapI RAATTY 8 cut(s) 737, 1238, 1425, 1517, 1810, 2007, 2264, 2555
XbaI TCTAGA 2 cut(s) 1744, 2543
XceI RCATGY 1 cut(s) 1347
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XmnI GAANNNNTTC 2 cut(s) 1272, 2274
XspI CTAG 6 cut(s) 299, 794, 993, 1745, 1829, 2544
ZrmI AGTACT 1 cut(s) 1111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.